ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ023303.1| Aegilops tauschii beta1 proteasome-1D gene, compl... 398 e-108
2gb|DQ023305.1| Aegilops tauschii beta1 proteasome-7D mRNA, compl... 226 6e-56
3gb|DQ023304.1| Aegilops tauschii beta1 proteasome-7D gene, compl... 157 4e-35
4ref|XM_507536.1| PREDICTED Oryza sativa (japonica cultivar-group... 127 4e-26
5ref|XM_468000.1| Oryza sativa (japonica cultivar-group), mRNA 127 4e-26
6ref|XM_506995.2| PREDICTED Oryza sativa (japonica cultivar-group... 127 4e-26
7dbj|AK104505.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
8dbj|AK103425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
9dbj|AK059837.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
10dbj|AB026563.1| Oryza sativa (japonica cultivar-group) OsPBA1 mR... 127 4e-26
11dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
13dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic D... 100 9e-18
14dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
15dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
16gb|AY103685.1| Zea mays PCO069906 mRNA sequence 80 8e-12
17emb|CR940307.5| M.truncatula DNA sequence from clone MTH2-21G21 ... 50 0.007
18emb|Y09505.1|NTY09505 N.tabacum mRNA for delta proteasome subunit 48 0.028
19gb|AC020992.10| Homo sapiens chromosome 8, clone RP11-23H1, comp... 46 0.11
20gb|AC019215.4|AC019215 Homo sapiens BAC clone RP11-480M18 from 8... 46 0.11
21gb|AY422741.1| Aeromonas hydrophila clone F70 unknown sequence 42 1.7
22gb|AY391274.1| Aeromonas hydrophila clone PA81 unknown genes 42 1.7
23emb|BX322612.8| Zebrafish DNA sequence from clone RP71-80O10 in ... 42 1.7
24emb|AL512583.11| Mouse DNA sequence from clone RP23-444H3 on chr... 42 1.7
25emb|AL591478.19| Mouse DNA sequence from clone RP23-140D14 on ch... 42 1.7
26gb|AC102398.12| Mus musculus chromosome 8, clone RP24-213P1, com... 40 6.9
27gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
28gb|AC154827.3| Mus musculus BAC clone RP24-546P18 from chromosom... 40 6.9
29ref|XM_427379.1| PREDICTED: Gallus gallus similar to hemicentin;... 40 6.9
30gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete s... 40 6.9
31emb|AL391426.9| Human DNA sequence from clone RP11-461F2 on chro... 40 6.9
32emb|AL138880.14| Human DNA sequence from clone RP11-491H9 on chr... 40 6.9
33emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022... 40 6.9
34gb|AC007542.3| Homo sapiens 12p12 BAC RPCI11-320J20 (Roswell Par... 40 6.9
35gb|AC023520.7| Homo sapiens, clone RP11-16M22, complete sequence 40 6.9
36gb|AC161478.5| Pan troglodytes BAC clone CH251-170F20 from chrom... 40 6.9
37gb|AC159215.2| Pan troglodytes BAC clone CH251-458G5 from chromo... 40 6.9
38dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
39gb|BC092389.1| Xenopus laevis cDNA clone MGC:85062 IMAGE:6327326... 40 6.9
40dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
41dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
42emb|AL158801.4|CNS01RGN Human chromosome 14 DNA sequence BAC R-6... 40 6.9
43dbj|AP002850.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.9
44dbj|AP005359.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 6.9
45emb|CT025681.8| Mouse DNA sequence from clone RP24-325P17 on chr... 40 6.9 
>gb|DQ023303.1| Aegilops tauschii beta1 proteasome-1D gene, complete cds
          Length = 4452

 Score =  398 bits (201), Expect = e-108
 Identities = 244/257 (94%), Gaps = 1/257 (0%)
 Strand = Plus / Minus

                                                                        
Query: 210  acgcatgaacaccagaacttttttaagttgtaataacaaggaggaaaacaagttggtgtc 269
            |||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4176 acgcatgaacaccaaaactattttaagttgtaataacaaggtggaaaacaagttggtgtc 4117

                                                                        
Query: 270  agcagaatctattccaagcaacgttcggcccaaatctagaacaagacatcggtacaatag 329
            ||||||||||||||||| ||||||||||| || |||||||||||| |||| |||||||||
Sbjct: 4116 agcagaatctattccaaacaacgttcggctcacatctagaacaagtcatcagtacaatag 4057

                                                                        
Query: 330  g-atttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttc 388
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4056 ggatttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttc 3997

                                                                        
Query: 389  tggggcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctctta 448
            ||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct: 3996 tggggctccatctcttcatgccacagtggcagtttgtcaccggggtggaagctcctctta 3937

                             
Query: 449  acaccctcctcgttaat 465
            |||||| ||||||||||
Sbjct: 3936 acacccgcctcgttaat 3920



 Score =  163 bits (82), Expect = 7e-37
 Identities = 152/174 (87%), Gaps = 6/174 (3%)
 Strand = Plus / Minus

                                                                        
Query: 38   ttttcctttccagggagactatccactactacaccaggaagtataagtttcagcatctag 97
            |||| ||||||||||| |||||||||||||||| | |  |||||||||||||||||||||
Sbjct: 4367 tttttctttccagggacactatccactactacagcggccagtataagtttcagcatctag 4308

                                                                        
Query: 98   ctttcgcaggtacatctttccagcaagcaatgccggattgcatttcctcgaccaagacgt 157
             |||||||||||||||||  |||||||||||||||||||||||||| | || ||||||||
Sbjct: 4307 ttttcgcaggtacatctt--cagcaagcaatgccggattgcatttcgttgagcaagacgt 4250

                                                                  
Query: 158  agccgtgtgtgttgccacaagcatatgtcatagtcaagttgcaccgcatggcac 211
            |||    ||||||| ||||||||||||   ||||| |||||||||||| |||||
Sbjct: 4249 agc----tgtgttgacacaagcatatgctgtagtcgagttgcaccgcaaggcac 4200



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 44/45 (97%)
 Strand = Plus / Minus

                                                         
Query: 466  agtaacagtgcgaacaacccctccactagcaccatcacgagcaat 510
            ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3381 agtaacagtgcgaacaacccctccactagcaccatcacgggcaat 3337
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>gb|DQ023305.1| Aegilops tauschii beta1 proteasome-7D mRNA, complete cds
          Length = 1029

 Score =  226 bits (114), Expect = 6e-56
 Identities = 162/178 (91%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
           ||||||||||||| |||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 829 ttcactggaccatggcatcagagctccccgccgcgagaatgtcgaggagcgagttctggg 770

                                                                       
Query: 393 gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
           ||| |||||| |||||||||||||||||  |||| ||||| |||||||||||||| || |
Sbjct: 769 gctccatctcctcatgccacagtggcagcttgtcgccaggatggaagctcctcttcacgc 710

                                                                     
Query: 453 cctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacgagcaat 510
           ||||||| || |||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 709 cctcctcatttatagtaacggtgcgaacaacccctccactagcaccatcacgtgcaat 652
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>gb|DQ023304.1| Aegilops tauschii beta1 proteasome-7D gene, complete cds
          Length = 6037

 Score =  157 bits (79), Expect = 4e-35
 Identities = 115/127 (90%)
 Strand = Plus / Minus

                                                                        
Query: 333  ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
            ||||||||||||| |||||||||||||| || ||||||||||| ||||||||||||||||
Sbjct: 4992 ttcactggaccatggcatcagagctccccgccgcgagaatgtcgaggagcgagttctggg 4933

                                                                        
Query: 393  gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
            ||| |||||| |||||||||||||||||  |||| ||||| |||||||||||||| || |
Sbjct: 4932 gctccatctcctcatgccacagtggcagcttgtcgccaggatggaagctcctcttcacgc 4873

                   
Query: 453  cctcctc 459
            |||||||
Sbjct: 4872 cctcctc 4866



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 43/45 (95%)
 Strand = Plus / Minus

                                                         
Query: 466  agtaacagtgcgaacaacccctccactagcaccatcacgagcaat 510
            |||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 4478 agtaacggtgcgaacaacccctccactagcaccatcacgtgcaat 4434
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>ref|XM_507536.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1079_F11.26
           mRNA
          Length = 1070

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
           |||| |||||||||| ||||| | |||||||||| || ||||| || | |||||||||||
Sbjct: 893 ttcattggaccatcggatcagggttcccagctgcaagtatgtccagcaacgagttctggg 834

                                                                       
Query: 393 gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
           ||| || |||||||||||||||| | ||| |||| |||||||| ||  |||||  |||||
Sbjct: 833 gctccagctcttcatgccacagttgtagtttgtctccagggtgaaatttcctcgaaacac 774

                                                               
Query: 453 cctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacg 504
           | ||  |||| ||||| || || |||||||||||||||||||||||||||||
Sbjct: 773 catctgcgtttatagtgacggtacgaacaacccctccactagcaccatcacg 722
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>ref|XM_468000.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1040

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
           |||| |||||||||| ||||| | |||||||||| || ||||| || | |||||||||||
Sbjct: 857 ttcattggaccatcggatcagggttcccagctgcaagtatgtccagcaacgagttctggg 798

                                                                       
Query: 393 gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
           ||| || |||||||||||||||| | ||| |||| |||||||| ||  |||||  |||||
Sbjct: 797 gctccagctcttcatgccacagttgtagtttgtctccagggtgaaatttcctcgaaacac 738

                                                               
Query: 453 cctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacg 504
           | ||  |||| ||||| || || |||||||||||||||||||||||||||||
Sbjct: 737 catctgcgtttatagtgacggtacgaacaacccctccactagcaccatcacg 686
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>ref|XM_506995.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1079_F11.26
           mRNA
          Length = 1085

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
           |||| |||||||||| ||||| | |||||||||| || ||||| || | |||||||||||
Sbjct: 845 ttcattggaccatcggatcagggttcccagctgcaagtatgtccagcaacgagttctggg 786

                                                                       
Query: 393 gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
           ||| || |||||||||||||||| | ||| |||| |||||||| ||  |||||  |||||
Sbjct: 785 gctccagctcttcatgccacagttgtagtttgtctccagggtgaaatttcctcgaaacac 726

                                                               
Query: 453 cctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacg 504
           | ||  |||| ||||| || || |||||||||||||||||||||||||||||
Sbjct: 725 catctgcgtttatagtgacggtacgaacaacccctccactagcaccatcacg 674
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>dbj|AK104505.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F11, full
           insert sequence
          Length = 1040

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
           |||| |||||||||| ||||| | |||||||||| || ||||| || | |||||||||||
Sbjct: 857 ttcattggaccatcggatcagggttcccagctgcaagtatgtccagcaacgagttctggg 798

                                                                       
Query: 393 gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
           ||| || |||||||||||||||| | ||| |||| |||||||| ||  |||||  |||||
Sbjct: 797 gctccagctcttcatgccacagttgtagtttgtctccagggtgaaatttcctcgaaacac 738

                                                               
Query: 453 cctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacg 504
           | ||  |||| ||||| || || |||||||||||||||||||||||||||||
Sbjct: 737 catctgcgtttatagtgacggtacgaacaacccctccactagcaccatcacg 686
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>dbj|AK103425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128K18, full
           insert sequence
          Length = 1084

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
           |||| |||||||||| ||||| | |||||||||| || ||||| || | |||||||||||
Sbjct: 845 ttcattggaccatcggatcagggttcccagctgcaagtatgtccagcaacgagttctggg 786

                                                                       
Query: 393 gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
           ||| || |||||||||||||||| | ||| |||| |||||||| ||  |||||  |||||
Sbjct: 785 gctccagctcttcatgccacagttgtagtttgtctccagggtgaaatttcctcgaaacac 726

                                                               
Query: 453 cctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacg 504
           | ||  |||| ||||| || || |||||||||||||||||||||||||||||
Sbjct: 725 catctgcgtttatagtgacggtacgaacaacccctccactagcaccatcacg 674
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>dbj|AK059837.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C07, full
           insert sequence
          Length = 1070

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
           |||| |||||||||| ||||| | |||||||||| || ||||| || | |||||||||||
Sbjct: 893 ttcattggaccatcggatcagggttcccagctgcaagtatgtccagcaacgagttctggg 834

                                                                       
Query: 393 gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
           ||| || |||||||||||||||| | ||| |||| |||||||| ||  |||||  |||||
Sbjct: 833 gctccagctcttcatgccacagttgtagtttgtctccagggtgaaatttcctcgaaacac 774

                                                               
Query: 453 cctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacg 504
           | ||  |||| ||||| || || |||||||||||||||||||||||||||||
Sbjct: 773 catctgcgtttatagtgacggtacgaacaacccctccactagcaccatcacg 722
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>dbj|AB026563.1| Oryza sativa (japonica cultivar-group) OsPBA1 mRNA for beta 1
           subunit of 20S proteasome, complete cds
          Length = 1068

 Score =  127 bits (64), Expect = 4e-26
 Identities = 145/172 (84%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
           |||| |||||||||| ||||| | |||||||||| || ||||| || | |||||||||||
Sbjct: 876 ttcattggaccatcggatcagggttcccagctgcaagtatgtccagcaacgagttctggg 817

                                                                       
Query: 393 gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
           ||| || |||||||||||||||| | ||| |||| |||||||| ||  |||||  |||||
Sbjct: 816 gctccagctcttcatgccacagttgtagtttgtctccagggtgaaatttcctcgaaacac 757

                                                               
Query: 453 cctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacg 504
           | ||  |||| ||||| || || |||||||||||||||||||||||||||||
Sbjct: 756 catctgcgtttatagtgacggtacgaacaacccctccactagcaccatcacg 705
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>dbj|AK104152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-C07, full
           insert sequence
          Length = 999

 Score =  125 bits (63), Expect = 2e-25
 Identities = 144/171 (84%)
 Strand = Plus / Minus

                                                                       
Query: 334 tcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctgggg 393
           |||||||||||||| ||||| | ||||||| || || ||||| || | ||||||||||||
Sbjct: 853 tcactggaccatcggatcagggttcccagcagcaagtatgtcgagcaacgagttctgggg 794

                                                                       
Query: 394 cttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacacc 453
           || ||||||||||||||| ||||| ||| ||||||||||||| ||  |||||  ||||||
Sbjct: 793 ctccatctcttcatgccagagtggtagtttgtcaccagggtgaaatttcctcgaaacacc 734

                                                              
Query: 454 ctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacg 504
            ||  | || || || || || |||||||||||||||||||||||||||||
Sbjct: 733 atcggcatttatggtgactgtacgaacaacccctccactagcaccatcacg 683
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                           
Query: 334     tcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctgggg 393
               |||||||||||||| ||||| | ||||||| || || ||||| || | ||||||||||||
Sbjct: 2090427 tcactggaccatcggatcagggttcccagcagcaagtatgtcgagcaacgagttctgggg 2090486

                                                         
Query: 394     cttcatctcttcatgccacagtggcagtatgtcaccagggtg 435
               || ||||||||||||||| ||||| ||| |||||||||||||
Sbjct: 2090487 ctccatctcttcatgccagagtggtagtttgtcaccagggtg 2090528



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                            
Query: 476     cgaacaacccctccactagcaccatcacg 504
               |||||||||||||||||||||||||||||
Sbjct: 2091055 cgaacaacccctccactagcaccatcacg 2091083
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>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0041F13
          Length = 163230

 Score = 99.6 bits (50), Expect = 9e-18
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                          
Query: 334    tcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctgggg 393
              |||||||||||||| ||||| | ||||||| || || ||||| || | ||||||||||||
Sbjct: 111289 tcactggaccatcggatcagggttcccagcagcaagtatgtcgagcaacgagttctgggg 111348

                                                        
Query: 394    cttcatctcttcatgccacagtggcagtatgtcaccagggtg 435
              || ||||||||||||||| ||||| ||| |||||||||||||
Sbjct: 111349 ctccatctcttcatgccagagtggtagtttgtcaccagggtg 111390



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                           
Query: 476    cgaacaacccctccactagcaccatcacg 504
              |||||||||||||||||||||||||||||
Sbjct: 111917 cgaacaacccctccactagcaccatcacg 111945
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                            
Query: 333      ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
                |||| |||||||||| ||||| | |||||||||| || ||||| || | |||||||||||
Sbjct: 32483734 ttcattggaccatcggatcagggttcccagctgcaagtatgtccagcaacgagttctggg 32483793

                                                           
Query: 393      gcttcatctcttcatgccacagtggcagtatgtcaccagggtg 435
                ||| || |||||||||||||||| | ||| |||| ||||||||
Sbjct: 32483794 gctccagctcttcatgccacagttgtagtttgtctccagggtg 32483836



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                             
Query: 476      cgaacaacccctccactagcaccatcacg 504
                |||||||||||||||||||||||||||||
Sbjct: 32484427 cgaacaacccctccactagcaccatcacg 32484455
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>dbj|AP004080.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1079_F11
          Length = 122402

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                         
Query: 333   ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
             |||| |||||||||| ||||| | |||||||||| || ||||| || | |||||||||||
Sbjct: 87127 ttcattggaccatcggatcagggttcccagctgcaagtatgtccagcaacgagttctggg 87186

                                                        
Query: 393   gcttcatctcttcatgccacagtggcagtatgtcaccagggtg 435
             ||| || |||||||||||||||| | ||| |||| ||||||||
Sbjct: 87187 gctccagctcttcatgccacagttgtagtttgtctccagggtg 87229



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                          
Query: 476   cgaacaacccctccactagcaccatcacg 504
             |||||||||||||||||||||||||||||
Sbjct: 87820 cgaacaacccctccactagcaccatcacg 87848
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>gb|AY103685.1| Zea mays PCO069906 mRNA sequence
          Length = 1201

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 139/172 (80%)
 Strand = Plus / Minus

                                                                       
Query: 333 ttcactggaccatcgcatcagagctcccagctgcgagaatgtcaaggagcgagttctggg 392
           ||||||| ||||| | ||||| | ||||||| || ||||| ||||| | |||||||||||
Sbjct: 926 ttcactgcaccatgggatcagggttcccagcagcaagaatatcaagcaacgagttctggg 867

                                                                       
Query: 393 gcttcatctcttcatgccacagtggcagtatgtcaccagggtggaagctcctcttaacac 452
           | | || ||| || |||||||| || ||  |||| |||||||  ||| ||||||| || |
Sbjct: 866 gttccagctcgtcgtgccacaggggtagcttgtcgccagggtaaaagttcctcttcacgc 807

                                                               
Query: 453 cctcctcgttaatagtaacagtgcgaacaacccctccactagcaccatcacg 504
           | ||| | || || ||||| || || ||||||||||||||||||||||||||
Sbjct: 806 catccgcatttattgtaactgtacggacaacccctccactagcaccatcacg 755
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>emb|CR940307.5| M.truncatula DNA sequence from clone MTH2-21G21 on chromosome 3,
             complete sequence
          Length = 115223

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                              
Query: 479   acaacccctccactagcaccatcacgagcaatg 511
             ||||| || ||||||||||||||||||||||||
Sbjct: 64466 acaactccgccactagcaccatcacgagcaatg 64434
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>emb|Y09505.1|NTY09505 N.tabacum mRNA for delta proteasome subunit
          Length = 978

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                               
Query: 460 gttaatagtaacagtgcgaacaacccctccactagcaccatcacgagcaatg 511
           ||||||||| ||||| || ||||| || |||||||||||||| || ||||||
Sbjct: 623 gttaatagttacagtccggacaactccaccactagcaccatctcgtgcaatg 572
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>gb|AC020992.10| Homo sapiens chromosome 8, clone RP11-23H1, complete sequence
          Length = 129413

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 33    atttattttcctttccagggaga 55
             |||||||||||||||||||||||
Sbjct: 17112 atttattttcctttccagggaga 17134
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>gb|AC019215.4|AC019215 Homo sapiens BAC clone RP11-480M18 from 8, complete sequence
          Length = 192579

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 33     atttattttcctttccagggaga 55
              |||||||||||||||||||||||
Sbjct: 142952 atttattttcctttccagggaga 142974
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>gb|AY422741.1| Aeromonas hydrophila clone F70 unknown sequence
          Length = 804

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 225 aacttttttaagttgtaataa 245
           |||||||||||||||||||||
Sbjct: 409 aacttttttaagttgtaataa 389
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>gb|AY391274.1| Aeromonas hydrophila clone PA81 unknown genes
          Length = 2118

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 225  aacttttttaagttgtaataa 245
            |||||||||||||||||||||
Sbjct: 1604 aacttttttaagttgtaataa 1624
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>emb|BX322612.8| Zebrafish DNA sequence from clone RP71-80O10 in linkage group 23,
             complete sequence
          Length = 158403

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 165   tgtgttgccacaagcatatgtcata 189
             |||||||||| ||||||||||||||
Sbjct: 68362 tgtgttgccataagcatatgtcata 68386
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>emb|AL512583.11| Mouse DNA sequence from clone RP23-444H3 on chromosome 2, complete
              sequence
          Length = 181847

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     tttattttcctttccagggag 54
              |||||||||||||||||||||
Sbjct: 132484 tttattttcctttccagggag 132464
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>emb|AL591478.19| Mouse DNA sequence from clone RP23-140D14 on chromosome 2, complete
            sequence
          Length = 236979

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 248  aggaggaaaacaagttggtgtcagcagaa 276
            ||||||||||||||||||| | |||||||
Sbjct: 5934 aggaggaaaacaagttggttttagcagaa 5906
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>gb|AC102398.12| Mus musculus chromosome 8, clone RP24-213P1, complete sequence
          Length = 172457

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 86    ttcagcatctagctttcgcaggta 109
             |||||||| |||||||||||||||
Sbjct: 95723 ttcagcatttagctttcgcaggta 95746
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>gb|AY360385.1| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0095C12,
             complete sequence
          Length = 146632

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    tagatttattttcctttcca 49
             ||||||||||||||||||||
Sbjct: 56580 tagatttattttcctttcca 56561
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>gb|AC154827.3| Mus musculus BAC clone RP24-546P18 from chromosome 14, complete sequence
          Length = 168432

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     gactatccactactacacca 73
              ||||||||||||||||||||
Sbjct: 110595 gactatccactactacacca 110614
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>ref|XM_427379.1| PREDICTED: Gallus gallus similar to hemicentin; fibulin 6
           (LOC429823), partial mRNA
          Length = 282

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 163 tgtgtgttgccacaagcata 182
           ||||||||||||||||||||
Sbjct: 223 tgtgtgttgccacaagcata 242
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>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence
          Length = 133305

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 488  ccactagcaccatcacgagcaatg 511
            |||||| |||||||||||||||||
Sbjct: 8913 ccactatcaccatcacgagcaatg 8936
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>emb|AL391426.9| Human DNA sequence from clone RP11-461F2 on chromosome 6, complete
             sequence
          Length = 27736

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ctagatttattttcctttcc 48
             ||||||||||||||||||||
Sbjct: 17887 ctagatttattttcctttcc 17868
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>emb|AL138880.14| Human DNA sequence from clone RP11-491H9 on chromosome 6 Contains part of
              the SUPT3H gene for suppressor of Ty 3 homolog (S.
              cerevisiae), a novel pseudogene and a pseudogene similar to
              part of poly(rC) binding protein 3 (PCBP3), complete
              sequence
          Length = 165454

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     agatttattttcctttccag 50
              ||||||||||||||||||||
Sbjct: 115599 agatttattttcctttccag 115580
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>emb|AL121581.41|HS1022E24 Human DNA sequence from clone RP5-1022E24 on chromosome 20 Contains the
             3' end of the OPRL1 gene for opiate receptor-like 1
             protein, the GPR8 gene encoding a G protein-coupled
             receptor, the KIAA0835 gene encoding a protein similar to 
             the myelin transcription factor 1 (MYT1), a novel gene, 7
             CpG islands, ESTs, STSs and GSSs, complete sequence
          Length = 179888

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    ctagatttattttcctttcc 48
             ||||||||||||||||||||
Sbjct: 53666 ctagatttattttcctttcc 53685
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>gb|AC007542.3| Homo sapiens 12p12 BAC RPCI11-320J20 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 162081

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     attttcctttccagggagac 56
              ||||||||||||||||||||
Sbjct: 135898 attttcctttccagggagac 135879
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>gb|AC023520.7| Homo sapiens, clone RP11-16M22, complete sequence
          Length = 134774

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 432   ggtggaagctcctcttaaca 451
             ||||||||||||||||||||
Sbjct: 81453 ggtggaagctcctcttaaca 81434
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>gb|AC161478.5| Pan troglodytes BAC clone CH251-170F20 from chromosome unknown,
             complete sequence
          Length = 150487

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   ttttttaagttgtaataaca 247
             ||||||||||||||||||||
Sbjct: 66956 ttttttaagttgtaataaca 66975
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>gb|AC159215.2| Pan troglodytes BAC clone CH251-458G5 from chromosome unknown, complete
              sequence
          Length = 208565

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    ttttttaagttgtaataaca 247
              ||||||||||||||||||||
Sbjct: 158505 ttttttaagttgtaataaca 158486
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 30       tagatttattttcctttcca 49
                ||||||||||||||||||||
Sbjct: 13468953 tagatttattttcctttcca 13468934
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>gb|BC092389.1| Xenopus laevis cDNA clone MGC:85062 IMAGE:6327326, complete cds
          Length = 1405

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 170 tgccacaagcatatgtcata 189
           ||||||||||||||||||||
Sbjct: 385 tgccacaagcatatgtcata 366
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>dbj|AP005500.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0451H06
          Length = 136473

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 30   tagatttattttcctttcca 49
            ||||||||||||||||||||
Sbjct: 7267 tagatttattttcctttcca 7248
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>dbj|AP004228.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1120_B07
          Length = 118763

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 30     tagatttattttcctttcca 49
              ||||||||||||||||||||
Sbjct: 105680 tagatttattttcctttcca 105661
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>emb|AL158801.4|CNS01RGN Human chromosome 14 DNA sequence BAC R-665C16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 205860

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     agatttattttcctttccag 50
              ||||||||||||||||||||
Sbjct: 142246 agatttattttcctttccag 142227
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>dbj|AP002850.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB87D5
          Length = 98988

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 432 ggtggaagctcctcttaaca 451
           ||||||||||||||||||||
Sbjct: 190 ggtggaagctcctcttaaca 171
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>dbj|AP005359.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1470F2, complete
              sequence
          Length = 164913

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 432    ggtggaagctcctcttaaca 451
              ||||||||||||||||||||
Sbjct: 149489 ggtggaagctcctcttaaca 149470
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>emb|CT025681.8| Mouse DNA sequence from clone RP24-325P17 on chromosome 14, complete
             sequence
          Length = 205581

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    gactatccactactacacca 73
             ||||||||||||||||||||
Sbjct: 74004 gactatccactactacacca 73985


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,239,423
Number of Sequences: 3902068
Number of extensions: 4239423
Number of successful extensions: 81011
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80851
Number of HSP's gapped (non-prelim): 157
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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