ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart26a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009069.1| Triticum aestivum clone wia1c.pk001.d20:fis, full... 670 0.0
2dbj|AK071114.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 7e-86
3dbj|AK062236.1| Oryza sativa (japonica cultivar-group) cDNA clon... 325 7e-86
4gb|BT016561.1| Zea mays clone Contig394 mRNA sequence 252 8e-64
5gb|AY108793.1| Zea mays PCO080711 mRNA sequence 252 8e-64
6gb|DQ083211.1| Oryza sativa (indica cultivar-group) clone 7S11F3... 141 2e-30
7dbj|AK069911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 5e-28
8dbj|AK061978.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 5e-28
9gb|AY112471.1| Zea mays CL718_1 mRNA sequence 129 8e-27
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
11gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
12emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa... 121 2e-24
13gb|BT014017.1| Lycopersicon esculentum clone 133079F, mRNA sequence 100 7e-18
14emb|AJ344108.1|LAL344108 Lupinus albus mRNA for ATP citrate lyas... 88 3e-14
15gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
16gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosom... 74 4e-10
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 74 4e-10
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 74 4e-10
19gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete seq... 64 4e-07
20emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j... 52 0.002
21gb|AC008952.7| Homo sapiens chromosome 5 clone CTD-2337D22, comp... 48 0.024
22gb|AC008838.6| Homo sapiens chromosome 5 clone CTD-2151B15, comp... 48 0.024
23gb|AC008529.4|AC008529 Homo sapiens chromosome 5 clone CTC-475P1... 48 0.024
24dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone... 48 0.024
25ref|NM_179303.1| Arabidopsis thaliana ACLA-1 AT1G10670 (ACLA-1) ... 44 0.38
26ref|NM_100943.2| Arabidopsis thaliana ACLA-1 AT1G10670 (ACLA-1) ... 44 0.38
27gb|AY113979.1| Arabidopsis thaliana putative ATP citrate-lyase (... 44 0.38
28gb|AY056213.1| Arabidopsis thaliana putative ATP citrate-lyase (... 44 0.38
29gb|AY094479.1| Arabidopsis thaliana At1g10670/F20B24_11 mRNA, co... 44 0.38
30gb|AY056593.1| Arabidopsis thaliana ATP-citrate lyase subunit A ... 44 0.38
31dbj|AK222079.1| Arabidopsis thaliana mRNA for hypothetical prote... 44 0.38
32gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis thaliana... 44 0.38
33gb|AY087536.1| Arabidopsis thaliana clone 36439 mRNA, complete s... 44 0.38
34emb|AL353646.9| Human DNA sequence from clone RP11-186A13 on chr... 42 1.5
35gb|AC011194.15|AC011194 Mus musculus chromosome 11, clone RP23-1... 42 1.5
36emb|AL645478.15| Mouse DNA sequence from clone RP23-85A17 on chr... 42 1.5
37gb|AY647939.1| Arabidopsis lyrata subsp. petraea AT1G44120 gene,... 40 5.9
38gb|AC125083.3| Mus musculus chromosome 19 clone RP24-98I2, compl... 40 5.9
39gb|AC087828.6| Homo sapiens chromosome 15, clone RP11-292P13, co... 40 5.9
40gb|BC047648.1| Homo sapiens ribosomal protein S27-like, mRNA (cD... 40 5.9
41emb|AL662875.14| Mouse DNA sequence from clone RP23-67E18 on chr... 40 5.9
42gb|AC122108.2| Homo sapiens chromosome 15 clone CTD-2008A1 map 1... 40 5.9
43gb|AC120778.2| Homo sapiens chromosome 15 clone CTD-2163N2 map 1... 40 5.9
44dbj|AK090738.1| Homo sapiens cDNA FLJ33419 fis, clone BRACE2019877 40 5.9
45gb|AC091117.5| Homo sapiens chromosome 15 clone RP11-109D20 map ... 40 5.9
46gb|AC016207.9| Homo sapiens, clone RP11-25H20, complete sequence 40 5.9
47gb|AC091245.2| Homo sapiens chromosome 15 clone RP11-456H13 map ... 40 5.9
48gb|AC018901.8| Homo sapiens chromosome 15 clone RP11-292P13 map ... 40 5.9
49gb|AC087612.6| Homo sapiens chromosome 15, clone RP11-69G7, comp... 40 5.9
50emb|AL929220.13| Zebrafish DNA sequence from clone DKEY-65B13 in... 40 5.9
51gb|AC140942.1| Gallus gallus BAC clone TAM32-50C11 from chromoso... 40 5.9

>gb|BT009069.1| Triticum aestivum clone wia1c.pk001.d20:fis, full insert mRNA
            sequence
          Length = 1535

 Score =  670 bits (338), Expect = 0.0
 Identities = 411/434 (94%), Gaps = 1/434 (0%)
 Strand = Plus / Minus

                                                                        
Query: 3    gaaccgcaaagcaagatatatattattgcgtagttgggttacaacagtagttcctttccc 62
            ||||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||
Sbjct: 1511 gaaccgcaaagcaagatatatattattgcgtagttgcattacaactgtagtttctttccc 1452

                                                                        
Query: 63   ccacaaaaccgatctttctctgtttgcttcacacgaacagttctttatactaaatgtata 122
            |||||||||||||||||||| |||||||||||||||| |||| || ||||||||||||||
Sbjct: 1451 ccacaaaaccgatctttctccgtttgcttcacacgaatagttgttcatactaaatgtata 1392

                                                                        
Query: 123  tggaacaaaatggacacaactgtaaacaccggaactatacaatgacgaatcatgcttcag 182
            ||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 1391 tggaaaaaaatggacacaact-taaacaccggaactatacaacgacgaatcatgcttcag 1333

                                                                        
Query: 183  ccatgacgtaatcaatggcttgcttgcaaattccagtcattggggcctctggtccataaa 242
            |||||||  ||||||||||||||||||| ||||||||||||| ||||||||||||||| |
Sbjct: 1332 ccatgacacaatcaatggcttgcttgcagattccagtcattgtggcctctggtccataga 1273

                                                                        
Query: 243  cctcaattggaaaaccaagctctgatcctagggctcgcattttggcgagtccagtttggt 302
            |||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 1272 cctcaattggaagaccaagctctgatcctagagcacgcattttggcgagtccagtttggt 1213

                                                                        
Query: 303  agtttggaccacctcgccaaacataaatgttcacccttgcagcctttaatttggattcct 362
            |||||||||||||||  | |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1212 agtttggaccacctctgcgaacataaatgttcacccttgcagcttttaatttggattcct 1153

                                                                        
Query: 363  tctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttgcga 422
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 tctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttgcga 1093

                          
Query: 423  taccccctccaatg 436
            ||||||||||||||
Sbjct: 1092 taccccctccaatg 1079



to top

>dbj|AK071114.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078F10, full
            insert sequence
          Length = 1739

 Score =  325 bits (164), Expect = 7e-86
 Identities = 242/268 (90%)
 Strand = Plus / Minus

                                                                        
Query: 169  gaatcatgcttcagccatgacgtaatcaatggcttgcttgcaaattccagtcattggggc 228
            |||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||  ||
Sbjct: 1412 gaattatgcttcagccatgatgcaatcaatggcttgcttgcagattccagtcattgttgc 1353

                                                                        
Query: 229  ctctggtccataaacctcaattggaaaaccaagctctgatcctagggctcgcattttggc 288
            |||||||||||| ||||||||||||| |||||| ||||  ||||| |  |||||||||||
Sbjct: 1352 ctctggtccatatacctcaattggaacaccaagttctgcacctagtgtacgcattttggc 1293

                                                                        
Query: 289  gagtccagtttggtagtttggaccacctcgccaaacataaatgttcacccttgcagcctt 348
             || ||||||||||||||||||||||||| || ||| |||||||||| || |||||||||
Sbjct: 1292 aaggccagtttggtagtttggaccacctctccgaacgtaaatgttcatccgtgcagcctt 1233

                                                                        
Query: 349  taatttggattccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatc 408
             |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1232 caatttggattccttctctcttaaagctcgaatgatgccactgaatgtagcagcgacatc 1173

                                        
Query: 409  agtgaagtttgcgataccccctccaatg 436
            ||||||||| || ||||| |||||||||
Sbjct: 1172 agtgaagttcgctataccacctccaatg 1145



to top

>dbj|AK062236.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E02, full
            insert sequence
          Length = 1613

 Score =  325 bits (164), Expect = 7e-86
 Identities = 242/268 (90%)
 Strand = Plus / Minus

                                                                        
Query: 169  gaatcatgcttcagccatgacgtaatcaatggcttgcttgcaaattccagtcattggggc 228
            |||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||  ||
Sbjct: 1411 gaattatgcttcagccatgatgcaatcaatggcttgcttgcagattccagtcattgttgc 1352

                                                                        
Query: 229  ctctggtccataaacctcaattggaaaaccaagctctgatcctagggctcgcattttggc 288
            |||||||||||| ||||||||||||| |||||| ||||  ||||| |  |||||||||||
Sbjct: 1351 ctctggtccatatacctcaattggaacaccaagttctgcacctagtgtacgcattttggc 1292

                                                                        
Query: 289  gagtccagtttggtagtttggaccacctcgccaaacataaatgttcacccttgcagcctt 348
             || ||||||||||||||||||||||||| || ||| |||||||||| || |||||||||
Sbjct: 1291 aaggccagtttggtagtttggaccacctctccgaacgtaaatgttcatccgtgcagcctt 1232

                                                                        
Query: 349  taatttggattccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatc 408
             |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1231 caatttggattccttctctcttaaagctcgaatgatgccactgaatgtagcagcgacatc 1172

                                        
Query: 409  agtgaagtttgcgataccccctccaatg 436
            ||||||||| || ||||| |||||||||
Sbjct: 1171 agtgaagttcgctataccacctccaatg 1144



to top

>gb|BT016561.1| Zea mays clone Contig394 mRNA sequence
          Length = 1630

 Score =  252 bits (127), Expect = 8e-64
 Identities = 220/251 (87%)
 Strand = Plus / Minus

                                                                        
Query: 182  gccatgacgtaatcaatggcttgcttgcaaattccagtcattggggcctctggtccataa 241
            ||||||| | ||||||||||||  ||||| || |||||||| |  |||||||||||||| 
Sbjct: 1343 gccatgatgcaatcaatggcttctttgcagatcccagtcatggtcgcctctggtccatag 1284

                                                                        
Query: 242  acctcaattggaaaaccaagctctgatcctagggctcgcattttggcgagtccagtttgg 301
            |||||||||||||  ||||| || |  |||||||  ||||||||||||||||||||||||
Sbjct: 1283 acctcaattggaacgccaagttcggcgcctagggtgcgcattttggcgagtccagtttgg 1224

                                                                        
Query: 302  tagtttggaccacctcgccaaacataaatgttcacccttgcagcctttaatttggattcc 361
            ||||| |||||||||| ||  ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 1223 tagttcggaccacctctccggacataaatgttcatccttgcagcctttaatttggactcc 1164

                                                                        
Query: 362  ttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttgcg 421
            ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||| |||
Sbjct: 1163 ttctctcttaaagcccgaatgatgccactaaatgtagaagcaacatctgtgaagttagcg 1104

                       
Query: 422  ataccccctcc 432
            || || |||||
Sbjct: 1103 attcctcctcc 1093



to top

>gb|AY108793.1| Zea mays PCO080711 mRNA sequence
          Length = 1790

 Score =  252 bits (127), Expect = 8e-64
 Identities = 220/251 (87%)
 Strand = Plus / Minus

                                                                        
Query: 182  gccatgacgtaatcaatggcttgcttgcaaattccagtcattggggcctctggtccataa 241
            ||||||| | ||||||||||||  ||||| || |||||||| |  |||||||||||||| 
Sbjct: 1459 gccatgatgcaatcaatggcttctttgcagatcccagtcatggtcgcctctggtccatag 1400

                                                                        
Query: 242  acctcaattggaaaaccaagctctgatcctagggctcgcattttggcgagtccagtttgg 301
            |||||||||||||  ||||| || |  |||||||  ||||||||||||||||||||||||
Sbjct: 1399 acctcaattggaacgccaagttcggcgcctagggtgcgcattttggcgagtccagtttgg 1340

                                                                        
Query: 302  tagtttggaccacctcgccaaacataaatgttcacccttgcagcctttaatttggattcc 361
            ||||| |||||||||| ||  ||||||||||||| ||||||||||||||||||||| |||
Sbjct: 1339 tagttcggaccacctctccggacataaatgttcatccttgcagcctttaatttggactcc 1280

                                                                        
Query: 362  ttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttgcg 421
            ||||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||| |||
Sbjct: 1279 ttctctcttaaagcccgaatgatgccactaaatgtagaagcaacatctgtgaagttagcg 1220

                       
Query: 422  ataccccctcc 432
            || || |||||
Sbjct: 1219 attcctcctcc 1209



to top

>gb|DQ083211.1| Oryza sativa (indica cultivar-group) clone 7S11F33 mRNA sequence
          Length = 473

 Score =  141 bits (71), Expect = 2e-30
 Identities = 200/243 (82%)
 Strand = Plus / Minus

                                                                       
Query: 194 tcaatggcttgcttgcaaattccagtcattggggcctctggtccataaacctcaattgga 253
           ||||| ||||||||||| ||||||||||| |  || ||||| ||||| |||||||| || 
Sbjct: 291 tcaattgcttgcttgcagattccagtcatcgtcgcttctggcccatacacctcaatcggg 232

                                                                       
Query: 254 aaaccaagctctgatcctagggctcgcattttggcgagtccagtttggtagtttggacca 313
           | ||| || ||||  || ||    |||||||| || || ||||||||||| |||||||||
Sbjct: 231 acaccgagttctgcgccaagcttgcgcattttagccagcccagtttggtaatttggacca 172

                                                                       
Query: 314 cctcgccaaacataaatgttcacccttgcagcctttaatttggattccttctctcttaaa 373
           || || |  ||||| |||| || |||||||||||| || |||||||||||||||||||| 
Sbjct: 171 ccacgtcggacatagatgtgcatccttgcagccttcaacttggattccttctctcttaag 112

                                                                       
Query: 374 gcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttgcgataccccctcca 433
           |||||||||||||| || ||||| ||  |||| || |||||||| || ||||||||||||
Sbjct: 111 gcccgaatgatgccgctaaatgtggccccgacgtcggtgaagttagctataccccctcca 52

              
Query: 434 atg 436
           |||
Sbjct: 51  atg 49



to top

>dbj|AK069911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038A05, full
            insert sequence
          Length = 1616

 Score =  133 bits (67), Expect = 5e-28
 Identities = 136/159 (85%)
 Strand = Plus / Minus

                                                                        
Query: 278  cgcattttggcgagtccagtttggtagtttggaccacctcgccaaacataaatgttcacc 337
            |||||||| || || ||||||||||| ||||||||||| || |  ||||| |||| || |
Sbjct: 1299 cgcattttagccagcccagtttggtaatttggaccaccacgtcggacatagatgtgcatc 1240

                                                                        
Query: 338  cttgcagcctttaatttggattccttctctcttaaagcccgaatgatgccactgaatgta 397
            ||||||||||| || |||||||||||||||||||| |||||||||||||| || ||||| 
Sbjct: 1239 cttgcagccttcaacttggattccttctctcttaaggcccgaatgatgccgctaaatgtg 1180

                                                   
Query: 398  gcagcgacatcagtgaagtttgcgataccccctccaatg 436
            ||  |||| || |||||||| || |||||||||||||||
Sbjct: 1179 gccccgacgtcggtgaagttagctataccccctccaatg 1141



to top

>dbj|AK061978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A05, full
            insert sequence
          Length = 1611

 Score =  133 bits (67), Expect = 5e-28
 Identities = 199/243 (81%)
 Strand = Plus / Minus

                                                                        
Query: 194  tcaatggcttgcttgcaaattccagtcattggggcctctggtccataaacctcaattgga 253
            ||||| ||||||||||| ||||||||||| |  || ||||| ||||| |||||||| || 
Sbjct: 1381 tcaattgcttgcttgcagattccagtcatcgtcgcttctggcccatacacctcaatcggg 1322

                                                                        
Query: 254  aaaccaagctctgatcctagggctcgcattttggcgagtccagtttggtagtttggacca 313
            |  || || ||||  || ||    |||||||| || || ||||||||||| |||||||||
Sbjct: 1321 acgccgagttctgcgccaagcttgcgcattttagccagcccagtttggtaatttggacca 1262

                                                                        
Query: 314  cctcgccaaacataaatgttcacccttgcagcctttaatttggattccttctctcttaaa 373
            || || |  ||||| |||| || |||||||||||| || |||||||||||||||||||| 
Sbjct: 1261 ccacgtcggacatagatgtgcatccttgcagccttcaacttggattccttctctcttaag 1202

                                                                        
Query: 374  gcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttgcgataccccctcca 433
            |||||||||||||| || ||||| ||  |||| || |||||||| || ||||||||||||
Sbjct: 1201 gcccgaatgatgccgctaaatgtggccccgacgtcggtgaagttagctataccccctcca 1142

               
Query: 434  atg 436
            |||
Sbjct: 1141 atg 1139



to top

>gb|AY112471.1| Zea mays CL718_1 mRNA sequence
          Length = 1590

 Score =  129 bits (65), Expect = 8e-27
 Identities = 209/257 (81%)
 Strand = Plus / Minus

                                                                        
Query: 180  cagccatgacgtaatcaatggcttgcttgcaaattccagtcattggggcctctggtccat 239
            ||||||||| | | ||||| ||||| ||||| ||||||||||| |  || ||||| ||||
Sbjct: 1355 cagccatgatgcattcaattgcttgtttgcagattccagtcatagtcgcttctggcccat 1296

                                                                        
Query: 240  aaacctcaattggaaaaccaagctctgatcctagggctcgcattttggcgagtccagttt 299
            | |||||||||||||  || || ||||  || ||    |||||||| || ||||||| ||
Sbjct: 1295 acacctcaattggaacgccgagttctgcaccaagcttacgcattttagccagtccagatt 1236

                                                                        
Query: 300  ggtagtttggaccacctcgccaaacataaatgttcacccttgcagcctttaatttggatt 359
            |||| |||||||||||||| |  |||||||||| ||  |||| |||||| || |||||||
Sbjct: 1235 ggtaatttggaccacctcggcggacataaatgtgcattcttgaagccttcaacttggatt 1176

                                                                        
Query: 360  ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
            ||||||| ||||| || || ||||||||| ||||||| | ||| |||||||||||||| |
Sbjct: 1175 ccttctcccttaaggctcggatgatgccattgaatgtggtagcaacatcagtgaagttag 1116

                             
Query: 420  cgataccccctccaatg 436
            | || || |||||||||
Sbjct: 1115 ctatgccacctccaatg 1099



to top

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Minus

                                                                            
Query: 242      acctcaattggaaaaccaagctctgatcctagggctcgcattttggcgagtccagtttgg 301
                ||||||||||||| |||||| ||||  ||||| |  ||||||||||| || |||||||||
Sbjct: 23312166 acctcaattggaacaccaagttctgcacctagtgtacgcattttggcaaggccagtttgg 23312107

                                                                            
Query: 302      tagtttggaccacctcgccaaacataaatgttcacccttgcagcctttaatttggattcc 361
                |||||||||||||||| || ||| |||||||||| || ||||||||| ||||||||||||
Sbjct: 23312106 tagtttggaccacctctccgaacgtaaatgttcatccgtgcagccttcaatttggattcc 23312047

                 
Query: 362      t 362
                |
Sbjct: 23312046 t 23312046



 Score =  121 bits (61), Expect = 2e-24
 Identities = 73/77 (94%)
 Strand = Plus / Minus

                                                                            
Query: 360      ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
                |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 23311944 ccttctctcttaaagctcgaatgatgccactgaatgtagcagcgacatcagtgaagttcg 23311885

                                 
Query: 420      cgataccccctccaatg 436
                | ||||| |||||||||
Sbjct: 23311884 ctataccacctccaatg 23311868



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                            
Query: 169      gaatcatgcttcagccatgacgtaatcaatggcttgcttgcaaattccagtcattggggc 228
                |||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||  ||
Sbjct: 23312403 gaattatgcttcagccatgatgcaatcaatggcttgcttgcagattccagtcattgttgc 23312344

                                 
Query: 229      ctctggtccataaacct 245
                |||||||||||| ||||
Sbjct: 23312343 ctctggtccatatacct 23312327



to top

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Minus

                                                                            
Query: 242      acctcaattggaaaaccaagctctgatcctagggctcgcattttggcgagtccagtttgg 301
                ||||||||||||| |||||| ||||  ||||| |  ||||||||||| || |||||||||
Sbjct: 23240357 acctcaattggaacaccaagttctgcacctagtgtacgcattttggcaaggccagtttgg 23240298

                                                                            
Query: 302      tagtttggaccacctcgccaaacataaatgttcacccttgcagcctttaatttggattcc 361
                |||||||||||||||| || ||| |||||||||| || ||||||||| ||||||||||||
Sbjct: 23240297 tagtttggaccacctctccgaacgtaaatgttcatccgtgcagccttcaatttggattcc 23240238

                 
Query: 362      t 362
                |
Sbjct: 23240237 t 23240237



 Score =  121 bits (61), Expect = 2e-24
 Identities = 73/77 (94%)
 Strand = Plus / Minus

                                                                            
Query: 360      ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
                |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 23240135 ccttctctcttaaagctcgaatgatgccactgaatgtagcagcgacatcagtgaagttcg 23240076

                                 
Query: 420      cgataccccctccaatg 436
                | ||||| |||||||||
Sbjct: 23240075 ctataccacctccaatg 23240059



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                            
Query: 169      gaatcatgcttcagccatgacgtaatcaatggcttgcttgcaaattccagtcattggggc 228
                |||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||  ||
Sbjct: 23240594 gaattatgcttcagccatgatgcaatcaatggcttgcttgcagattccagtcattgttgc 23240535

                                 
Query: 229      ctctggtccataaacct 245
                |||||||||||| ||||
Sbjct: 23240534 ctctggtccatatacct 23240518



to top

>emb|AL713908.3|CNS07YQ8 Oryza sativa chromosome 12, . BAC OSJNBa0011B18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 168063

 Score =  121 bits (61), Expect = 2e-24
 Identities = 106/121 (87%)
 Strand = Plus / Minus

                                                                          
Query: 242    acctcaattggaaaaccaagctctgatcctagggctcgcattttggcgagtccagtttgg 301
              ||||||||||||| |||||| ||||  ||||| |  ||||||||||| || |||||||||
Sbjct: 125284 acctcaattggaacaccaagttctgcacctagtgtacgcattttggcaaggccagtttgg 125225

                                                                          
Query: 302    tagtttggaccacctcgccaaacataaatgttcacccttgcagcctttaatttggattcc 361
              |||||||||||||||| || ||| |||||||||| || ||||||||| ||||||||||||
Sbjct: 125224 tagtttggaccacctctccgaacgtaaatgttcatccgtgcagccttcaatttggattcc 125165

               
Query: 362    t 362
              |
Sbjct: 125164 t 125164



 Score =  121 bits (61), Expect = 2e-24
 Identities = 73/77 (94%)
 Strand = Plus / Minus

                                                                          
Query: 360    ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
              |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 125062 ccttctctcttaaagctcgaatgatgccactgaatgtagcagcgacatcagtgaagttcg 125003

                               
Query: 420    cgataccccctccaatg 436
              | ||||| |||||||||
Sbjct: 125002 ctataccacctccaatg 124986



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                          
Query: 169    gaatcatgcttcagccatgacgtaatcaatggcttgcttgcaaattccagtcattggggc 228
              |||| ||||||||||||||| | ||||||||||||||||||| |||||||||||||  ||
Sbjct: 125521 gaattatgcttcagccatgatgcaatcaatggcttgcttgcagattccagtcattgttgc 125462

                               
Query: 229    ctctggtccataaacct 245
              |||||||||||| ||||
Sbjct: 125461 ctctggtccatatacct 125445



to top

>gb|BT014017.1| Lycopersicon esculentum clone 133079F, mRNA sequence
          Length = 1686

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 182/226 (80%)
 Strand = Plus / Minus

                                                                        
Query: 209  caaattccagtcattggggcctctggtccataaacctcaattggaaaaccaagctctgat 268
            |||||||| |||||||  ||||||||||||||||||||||  ||||  ||||| ||   |
Sbjct: 1493 caaattcccgtcattgtagcctctggtccataaacctcaaggggaactccaagttcctct 1434

                                                                        
Query: 269  cctagggctcgcattttggcgagtccagtttggtagtttggaccacctcgccaaacataa 328
            |||||||| |||||||| || || ||||| || || |||||||||||||  |  ||||| 
Sbjct: 1433 cctagggcgcgcatttttgctagaccagtctgataatttggaccacctcttcgtacatag 1374

                                                                        
Query: 329  atgttcacccttgcagcctttaatttggattccttctctcttaaagcccgaatgatgcca 388
            || | ||  || || || ||||  |||| ||||||||| || | ||||||||| || |||
Sbjct: 1373 atatgcattctagccgcttttagcttggcttccttctccctgagagcccgaataatccca 1314

                                                          
Query: 389  ctgaatgtagcagcgacatcagtgaagtttgcgataccccctccaa 434
             |||| |||||||| |||||||||||||| || ||||| |||||||
Sbjct: 1313 ttgaaagtagcagctacatcagtgaagttggcaataccacctccaa 1268



to top

>emb|AJ344108.1|LAL344108 Lupinus albus mRNA for ATP citrate lyase b-subunit (aclb gene)
          Length = 1617

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 113/136 (83%)
 Strand = Plus / Minus

                                                                        
Query: 299  tggtagtttggaccacctcgccaaacataaatgttcacccttgcagcctttaatttggat 358
            |||||||| ||||| |||| ||  |||||||||| || |||||| || ||||| ||||| 
Sbjct: 1217 tggtagttaggacctcctctcctcacataaatgtgcatccttgctgcttttaacttggac 1158

                                                                        
Query: 359  tccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagttt 418
            ||||||||| | |  || ||||| |||||||| ||||||||||| |||||||| ||||| 
Sbjct: 1157 tccttctctttcagtgctcgaattatgccactaaatgtagcagcaacatcagtaaagtta 1098

                            
Query: 419  gcgataccccctccaa 434
            || ||||| |||||||
Sbjct: 1097 gctatacctcctccaa 1082



to top

>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0004O15 map near R3342S, complete sequence
          Length = 140142

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                        
Query: 360  ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
            ||||||||||||| |||||||||||||| || ||||| ||  |||| || |||||||| |
Sbjct: 9886 ccttctctcttaaggcccgaatgatgccgctaaatgtggccccgacgtcggtgaagttag 9827

                             
Query: 420  cgataccccctccaatg 436
            | |||||||||||||||
Sbjct: 9826 ctataccccctccaatg 9810



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                         
Query: 278   cgcattttggcgagtccagtttggtagtttggaccacctcgccaaacataaatgttcacc 337
             |||||||| || || ||||||||||| ||||||||||| || |  ||||| |||| || |
Sbjct: 10085 cgcattttagccagcccagtttggtaatttggaccaccacgtcggacatagatgtgcatc 10026

                                      
Query: 338   cttgcagcctttaatttggattcct 362
             ||||||||||| || ||||||||||
Sbjct: 10025 cttgcagccttcaacttggattcct 10001



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 194   tcaatggcttgcttgcaaattccagtcat 222
             ||||| ||||||||||| |||||||||||
Sbjct: 10353 tcaattgcttgcttgcagattccagtcat 10325



to top

>gb|AC116367.10| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0059H21
              map R3342S, complete sequence
          Length = 133790

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                          
Query: 360    ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
              ||||||||||||| |||||||||||||| || ||||| ||  |||| || |||||||| |
Sbjct: 133584 ccttctctcttaaggcccgaatgatgccgctaaatgtggccccgacgtcggtgaagttag 133525

                               
Query: 420    cgataccccctccaatg 436
              | |||||||||||||||
Sbjct: 133524 ctataccccctccaatg 133508



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                          
Query: 278    cgcattttggcgagtccagtttggtagtttggaccacctcgccaaacataaatgttcacc 337
              |||||||| || || ||||||||||| ||||||||||| || |  ||||| |||| || |
Sbjct: 133783 cgcattttagccagcccagtttggtaatttggaccaccacgtcggacatagatgtgcatc 133724

                                       
Query: 338    cttgcagcctttaatttggattcct 362
              ||||||||||| || ||||||||||
Sbjct: 133723 cttgcagccttcaacttggattcct 133699



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 360      ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
                ||||||||||||| |||||||||||||| || ||||| ||  |||| || |||||||| |
Sbjct: 27853514 ccttctctcttaaggcccgaatgatgccgctaaatgtggccccgacgtcggtgaagttag 27853455

                                 
Query: 420      cgataccccctccaatg 436
                | |||||||||||||||
Sbjct: 27853454 ctataccccctccaatg 27853438



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 360      ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
                ||||||||||||| |||||||||||||| || ||||| ||  |||| || |||||||| |
Sbjct: 27712087 ccttctctcttaaggcccgaatgatgccgctaaatgtggccccgacgtcggtgaagttag 27712146

                                 
Query: 420      cgataccccctccaatg 436
                | |||||||||||||||
Sbjct: 27712147 ctataccccctccaatg 27712163



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                            
Query: 278      cgcattttggcgagtccagtttggtagtttggaccacctcgccaaacataaatgttcacc 337
                |||||||| || || ||||||||||| ||||||||||| || |  ||||| |||| || |
Sbjct: 27853713 cgcattttagccagcccagtttggtaatttggaccaccacgtcggacatagatgtgcatc 27853654

                                         
Query: 338      cttgcagcctttaatttggattcct 362
                ||||||||||| || ||||||||||
Sbjct: 27853653 cttgcagccttcaacttggattcct 27853629



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                            
Query: 278      cgcattttggcgagtccagtttggtagtttggaccacctcgccaaacataaatgttcacc 337
                |||||||| || || ||||||||||| ||||||||||| || |  ||||| |||| || |
Sbjct: 27711888 cgcattttagccagcccagtttggtaatttggaccaccacgtcggacatagatgtgcatc 27711947

                                         
Query: 338      cttgcagcctttaatttggattcct 362
                ||||||||||| || ||||||||||
Sbjct: 27711948 cttgcagccttcaacttggattcct 27711972



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 194      tcaatggcttgcttgcaaattccagtcat 222
                ||||| ||||||||||| |||||||||||
Sbjct: 27853982 tcaattgcttgcttgcagattccagtcat 27853954



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 194      tcaatggcttgcttgcaaattccagtcat 222
                ||||| ||||||||||| |||||||||||
Sbjct: 27711620 tcaattgcttgcttgcagattccagtcat 27711648



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Minus

                                                                            
Query: 360      ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
                ||||||||||||| |||||||||||||| || ||||| ||  |||| || |||||||| |
Sbjct: 27877502 ccttctctcttaaggcccgaatgatgccgctaaatgtggccccgacgtcggtgaagttag 27877443

                                 
Query: 420      cgataccccctccaatg 436
                | |||||||||||||||
Sbjct: 27877442 ctataccccctccaatg 27877426



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 67/77 (87%)
 Strand = Plus / Plus

                                                                            
Query: 360      ccttctctcttaaagcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttg 419
                ||||||||||||| |||||||||||||| || ||||| ||  |||| || |||||||| |
Sbjct: 27736075 ccttctctcttaaggcccgaatgatgccgctaaatgtggccccgacgtcggtgaagttag 27736134

                                 
Query: 420      cgataccccctccaatg 436
                | |||||||||||||||
Sbjct: 27736135 ctataccccctccaatg 27736151



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Minus

                                                                            
Query: 278      cgcattttggcgagtccagtttggtagtttggaccacctcgccaaacataaatgttcacc 337
                |||||||| || || ||||||||||| ||||||||||| || |  ||||| |||| || |
Sbjct: 27877701 cgcattttagccagcccagtttggtaatttggaccaccacgtcggacatagatgtgcatc 27877642

                                         
Query: 338      cttgcagcctttaatttggattcct 362
                ||||||||||| || ||||||||||
Sbjct: 27877641 cttgcagccttcaacttggattcct 27877617



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 72/85 (84%)
 Strand = Plus / Plus

                                                                            
Query: 278      cgcattttggcgagtccagtttggtagtttggaccacctcgccaaacataaatgttcacc 337
                |||||||| || || ||||||||||| ||||||||||| || |  ||||| |||| || |
Sbjct: 27735876 cgcattttagccagcccagtttggtaatttggaccaccacgtcggacatagatgtgcatc 27735935

                                         
Query: 338      cttgcagcctttaatttggattcct 362
                ||||||||||| || ||||||||||
Sbjct: 27735936 cttgcagccttcaacttggattcct 27735960



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 194      tcaatggcttgcttgcaaattccagtcat 222
                ||||| ||||||||||| |||||||||||
Sbjct: 27877970 tcaattgcttgcttgcagattccagtcat 27877942



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 194      tcaatggcttgcttgcaaattccagtcat 222
                ||||| ||||||||||| |||||||||||
Sbjct: 27735608 tcaattgcttgcttgcagattccagtcat 27735636



to top

>gb|AC132565.28| Medicago truncatula clone mth2-4a8, complete sequence
          Length = 134155

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 373   agcccgaatgatgccactgaatgtagcagcgacatcagtgaagtttgcgataccccctcc 432
             ||||| ||| |||||||||||||||||||| ||||| |||||||| || || ||||||||
Sbjct: 74451 agccctaattatgccactgaatgtagcagcaacatcggtgaagttagctattccccctcc 74510



to top

>emb|CT025841.2| Medicago truncatula chromosome 5 clone mth2-131j21, COMPLETE SEQUENCE
          Length = 122251

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                         
Query: 297   tttggtagtttggaccacctcgccaaacataaatgttcacccttgcagcctttaatttgg 356
             |||||||||||||||| |||||||  ||||||| || ||  ||||| |||||||| || |
Sbjct: 76809 tttggtagtttggaccccctcgcctcacataaaggtgcattcttgctgcctttaactttg 76868

                   
Query: 357   attcct 362
             ||||||
Sbjct: 76869 attcct 76874



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 374   gcccgaatgatgccactgaatgtagcagcgacatcagtgaagtt 417
             |||||||| || ||||| || |||||||| ||||||||||||||
Sbjct: 76976 gcccgaattatcccactaaaagtagcagcaacatcagtgaagtt 77019



to top

>gb|AC008952.7| Homo sapiens chromosome 5 clone CTD-2337D22, complete sequence
          Length = 184194

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 244    ctcaattggaaaaccaagctctga 267
              ||||||||||||||||||||||||
Sbjct: 163886 ctcaattggaaaaccaagctctga 163863



to top

>gb|AC008838.6| Homo sapiens chromosome 5 clone CTD-2151B15, complete sequence
          Length = 128642

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 244   ctcaattggaaaaccaagctctga 267
             ||||||||||||||||||||||||
Sbjct: 22635 ctcaattggaaaaccaagctctga 22658



to top

>gb|AC008529.4|AC008529 Homo sapiens chromosome 5 clone CTC-475P15, complete sequence
          Length = 169557

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 244    ctcaattggaaaaccaagctctga 267
              ||||||||||||||||||||||||
Sbjct: 131358 ctcaattggaaaaccaagctctga 131381



to top

>dbj|AP006629.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT10B11, TM0008,
              complete sequence
          Length = 116223

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                          
Query: 374    gcccgaatgatgccactgaatgtagcagcgacatcagtgaagtt 417
              |||||||| ||||| || ||||||||||| |||||||| |||||
Sbjct: 103063 gcccgaattatgccgctaaatgtagcagcaacatcagtaaagtt 103020



to top

>ref|NM_179303.1| Arabidopsis thaliana ACLA-1 AT1G10670 (ACLA-1) transcript variant
            AT1G10670.2 mRNA, complete cds
          Length = 1528

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 272  agggctcgcattttggcgagtccagtttggtagtttgg 309
            |||||||||||||| || |||||  |||||||||||||
Sbjct: 1246 agggctcgcattttagcaagtcccttttggtagtttgg 1209



to top

>ref|NM_100943.2| Arabidopsis thaliana ACLA-1 AT1G10670 (ACLA-1) transcript variant
            AT1G10670.1 mRNA, complete cds
          Length = 1536

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 272  agggctcgcattttggcgagtccagtttggtagtttgg 309
            |||||||||||||| || |||||  |||||||||||||
Sbjct: 1253 agggctcgcattttagcaagtcccttttggtagtttgg 1216



to top

>gb|AY113979.1| Arabidopsis thaliana putative ATP citrate-lyase (At1g10670) mRNA,
            complete cds
          Length = 1303

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 272  agggctcgcattttggcgagtccagtttggtagtttgg 309
            |||||||||||||| || |||||  |||||||||||||
Sbjct: 1172 agggctcgcattttagcaagtcccttttggtagtttgg 1135



to top

>gb|AY056213.1| Arabidopsis thaliana putative ATP citrate-lyase (At1g10670) mRNA,
            complete cds
          Length = 1519

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 272  agggctcgcattttggcgagtccagtttggtagtttgg 309
            |||||||||||||| || |||||  |||||||||||||
Sbjct: 1231 agggctcgcattttagcaagtcccttttggtagtttgg 1194



to top

>gb|AY094479.1| Arabidopsis thaliana At1g10670/F20B24_11 mRNA, complete cds
          Length = 1517

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 272  agggctcgcattttggcgagtccagtttggtagtttgg 309
            |||||||||||||| || |||||  |||||||||||||
Sbjct: 1234 agggctcgcattttagcaagtcccttttggtagtttgg 1197



to top

>gb|AY056593.1| Arabidopsis thaliana ATP-citrate lyase subunit A mRNA, complete cds
          Length = 1517

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 272  agggctcgcattttggcgagtccagtttggtagtttgg 309
            |||||||||||||| || |||||  |||||||||||||
Sbjct: 1222 agggctcgcattttagcaagtcccttttggtagtttgg 1185



to top

>dbj|AK222079.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL22-82-G08
          Length = 770

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 272 agggctcgcattttggcgagtccagtttggtagtttgg 309
           |||||||||||||| || |||||  |||||||||||||
Sbjct: 475 agggctcgcattttagcaagtcccttttggtagtttgg 438



to top

>gb|AC009398.6|AC009398 Genomic sequence for Arabidopsis thaliana BAC F20B24 from chromosome I,
             complete sequence
          Length = 99416

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 272   agggctcgcattttggcgagtccagtttggtagtttgg 309
             |||||||||||||| || |||||  |||||||||||||
Sbjct: 38202 agggctcgcattttagcaagtcccttttggtagtttgg 38165



to top

>gb|AY087536.1| Arabidopsis thaliana clone 36439 mRNA, complete sequence
          Length = 1532

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 272  agggctcgcattttggcgagtccagtttggtagtttgg 309
            |||||||||||||| || |||||  |||||||||||||
Sbjct: 1253 agggctcgcattttagcaagtcccttttggtagtttgg 1216



to top

>emb|AL353646.9| Human DNA sequence from clone RP11-186A13 on chromosome 13, complete
             sequence
          Length = 49820

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   tatactaaatgtatatggaac 128
             |||||||||||||||||||||
Sbjct: 24853 tatactaaatgtatatggaac 24833



to top

>gb|AC011194.15|AC011194 Mus musculus chromosome 11, clone RP23-196F5, complete sequence
          Length = 181320

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 349   taatttggattccttctctct 369
             |||||||||||||||||||||
Sbjct: 42727 taatttggattccttctctct 42747



to top

>emb|AL645478.15| Mouse DNA sequence from clone RP23-85A17 on chromosome 11, complete
             sequence
          Length = 121560

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 349   taatttggattccttctctct 369
             |||||||||||||||||||||
Sbjct: 61549 taatttggattccttctctct 61569



to top

>gb|AY647939.1| Arabidopsis lyrata subsp. petraea AT1G44120 gene, partial cds
          Length = 539

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 351 atttggattccttctctctt 370
           ||||||||||||||||||||
Sbjct: 86  atttggattccttctctctt 67



to top

>gb|AC125083.3| Mus musculus chromosome 19 clone RP24-98I2, complete sequence
          Length = 172673

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ctttctctgtttgcttcaca 95
             ||||||||||||||||||||
Sbjct: 87830 ctttctctgtttgcttcaca 87849



to top

>gb|AC087828.6| Homo sapiens chromosome 15, clone RP11-292P13, complete sequence
          Length = 185324

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    ttccttctctcttaaagccc 377
              ||||||||||||||||||||
Sbjct: 135373 ttccttctctcttaaagccc 135392



to top

>gb|BC047648.1| Homo sapiens ribosomal protein S27-like, mRNA (cDNA clone MGC:51145
            IMAGE:4837132), complete cds
          Length = 2959

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 110  tactaaatgtatatggaacaaaat 133
            |||||||| |||||||||||||||
Sbjct: 1867 tactaaatatatatggaacaaaat 1844



to top

>emb|AL662875.14| Mouse DNA sequence from clone RP23-67E18 on chromosome 11 Contains the
             3' end of the gene for the likely ortholog of H. sapiens
             C/EBP-induced protein (5730593F17Rik), the Ugalt2 gene for
             UDP-galactose translocator 2, the Spop gene for
             speckle-type POZ protein, the Nxph3 gene for neurexophilin
             3, the Ngfr gene for nerve growth factor receptor (TNFR
             superfamily, member 16), the 5' end of a novel gene and a
             CpG island, complete sequence
          Length = 255199

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 389   ctgaatgtagcagcgacatc 408
             ||||||||||||||||||||
Sbjct: 14944 ctgaatgtagcagcgacatc 14963



to top

>gb|AC122108.2| Homo sapiens chromosome 15 clone CTD-2008A1 map 15q21.1, complete
              sequence
          Length = 141944

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    ttccttctctcttaaagccc 377
              ||||||||||||||||||||
Sbjct: 118080 ttccttctctcttaaagccc 118099



to top

>gb|AC120778.2| Homo sapiens chromosome 15 clone CTD-2163N2 map 15q21.1, complete
             sequence
          Length = 113282

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   ttccttctctcttaaagccc 377
             ||||||||||||||||||||
Sbjct: 25412 ttccttctctcttaaagccc 25431



to top

>dbj|AK090738.1| Homo sapiens cDNA FLJ33419 fis, clone BRACE2019877
          Length = 2170

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 ttccttctctcttaaagccc 377
           ||||||||||||||||||||
Sbjct: 394 ttccttctctcttaaagccc 375



to top

>gb|AC091117.5| Homo sapiens chromosome 15 clone RP11-109D20 map 15q15, complete sequence
          Length = 181312

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 358    ttccttctctcttaaagccc 377
              ||||||||||||||||||||
Sbjct: 126074 ttccttctctcttaaagccc 126055



to top

>gb|AC016207.9| Homo sapiens, clone RP11-25H20, complete sequence
          Length = 169476

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 110    tactaaatgtatatggaacaaaat 133
              |||||||| |||||||||||||||
Sbjct: 167688 tactaaatatatatggaacaaaat 167665



to top

>gb|AC091245.2| Homo sapiens chromosome 15 clone RP11-456H13 map 15q15, complete
             sequence
          Length = 194311

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   ttccttctctcttaaagccc 377
             ||||||||||||||||||||
Sbjct: 90186 ttccttctctcttaaagccc 90205



to top

>gb|AC018901.8| Homo sapiens chromosome 15 clone RP11-292P13 map 15q15, complete sequence
          Length = 199503

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 358    ttccttctctcttaaagccc 377
              ||||||||||||||||||||
Sbjct: 149525 ttccttctctcttaaagccc 149544



to top

>gb|AC087612.6| Homo sapiens chromosome 15, clone RP11-69G7, complete sequence
          Length = 145405

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 110   tactaaatgtatatggaacaaaat 133
             |||||||| |||||||||||||||
Sbjct: 30676 tactaaatatatatggaacaaaat 30653



to top

>emb|AL929220.13| Zebrafish DNA sequence from clone DKEY-65B13 in linkage group 20,
             complete sequence
          Length = 227539

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 114   aaatgtatatggaacaaaat 133
             ||||||||||||||||||||
Sbjct: 30785 aaatgtatatggaacaaaat 30766



to top

>gb|AC140942.1| Gallus gallus BAC clone TAM32-50C11 from chromosome ul, complete
             sequence
          Length = 140346

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   ctttatactaaatgtatatg 124
             ||||||||||||||||||||
Sbjct: 36171 ctttatactaaatgtatatg 36152


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,001,094
Number of Sequences: 3902068
Number of extensions: 4001094
Number of successful extensions: 72114
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71955
Number of HSP's gapped (non-prelim): 157
length of query: 436
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 414
effective length of database: 17,147,199,772
effective search space: 7098940705608
effective search space used: 7098940705608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top