Clone Name | rbart26a05 |
---|---|
Clone Library Name | barley_pub |
>LGT_BDEBA (P60967) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)| Length = 352 Score = 32.0 bits (71), Expect = 0.82 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 314 DEGMRWVNVGVMMGFFLAYRIMCWAVLVRRA 222 D G+RW + MMGF AY ++ W +RA Sbjct: 15 DFGIRWYGLSYMMGFICAYILITWLAKRQRA 45
>OTC_ARCFU (O29013) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)| Length = 307 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/33 (48%), Positives = 20/33 (60%) Frame = -2 Query: 446 DLLLINEYGGSARDRCVAWMGGDAMNGNGVCLS 348 DLL I EY G +D +AW+G +GN VC S Sbjct: 136 DLLTIYEYRGDFKDVTLAWVG----DGNNVCNS 164
>PDR1_NICPL (Q949G3) Pleiotropic drug resistance protein 1 (NpPDR1)| Length = 1436 Score = 30.4 bits (67), Expect = 2.4 Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = -2 Query: 455 YPLDLLLINEYGGSARDRCVAWMGGDAMNGNGVCLSTGGDVLRGRGV--DEGMRWVNVGV 282 Y ++ +L+NE+ G VA G G V+R RG D W+ VG Sbjct: 719 YSVNAILVNEFDGQKWKHIVA----------GGTEPLGAAVVRARGFFPDAYWYWIGVGA 768 Query: 281 MMGFFLAYRI 252 + GF + + I Sbjct: 769 LAGFIVMFNI 778
>PDR7_ORYSA (Q8GU88) Putative pleiotropic drug resistance protein 7| Length = 1444 Score = 30.4 bits (67), Expect = 2.4 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = -2 Query: 455 YPLDLLLINEYGGSARDRCVAWMGGDAMNGNGVCLSTGGDVLRGRG--VDEGMRWVNVGV 282 Y + + +NE+ G + ++ V D N + G VL+ RG VD W+ VG Sbjct: 707 YAQNAIAVNEFLGHSWNKVV-----DPTQSND---TLGVQVLKVRGIFVDANWYWIGVGA 758 Query: 281 MMGFFLAYRIM 249 ++G+ + + I+ Sbjct: 759 LLGYIMLFNIL 769
>PDR1_TOBAC (Q76CU2) Pleiotropic drug resistance protein 1 (NtPDR1)| Length = 1434 Score = 29.3 bits (64), Expect = 5.3 Identities = 20/78 (25%), Positives = 38/78 (48%) Frame = -2 Query: 470 VSMYRYPLDLLLINEYGGSARDRCVAWMGGDAMNGNGVCLSTGGDVLRGRGVDEGMRWVN 291 +S Y ++ +L+NE+ G + V GG+ G+ V S RG + W+ Sbjct: 710 ISPMMYSVNSILVNEFDGKKWNHIVP--GGNETLGSTVVKS------RGFFPEAYWYWIG 761 Query: 290 VGVMMGFFLAYRIMCWAV 237 VG ++GF + + C+++ Sbjct: 762 VGALVGFTVVFN-FCYSL 778
>GWT1_CRYNV (Q873N0) GPI-anchored wall transfer protein 1 (EC 2.3.-.-)| (Inositol acyltransferase GWT1) Length = 598 Score = 29.3 bits (64), Expect = 5.3 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%) Frame = -2 Query: 380 DAMNGNGVCLSTGGDVLRGRGVDEGMR------WVNVGVMMGFFLAYRIMCWAVLVRR 225 DAMN NG+ + ++L G V+ M+ W+++GV+M + L + W + RR Sbjct: 539 DAMNKNGLAIFLAANLLTGL-VNVSMKTMYAPAWLSMGVLMLYTLTISCVGWILKGRR 595
>PDR12_ORYSA (Q5Z9S8) Pleiotropic drug resistance protein 12| Length = 1500 Score = 29.3 bits (64), Expect = 5.3 Identities = 19/82 (23%), Positives = 35/82 (42%), Gaps = 2/82 (2%) Frame = -2 Query: 470 VSMYRYPLDLLLINEYGGSARDRCVAWMGGDAMNGNGVCLSTGGDVLRGRGV--DEGMRW 297 VS Y + L +NE+ WM ++ NGV G ++ G + D+ W Sbjct: 731 VSPLMYGYNALAVNEFYSPR------WMNKFVLDNNGVPKRLGIALMEGANIFTDKNWFW 784 Query: 296 VNVGVMMGFFLAYRIMCWAVLV 231 + ++GF + + ++ LV Sbjct: 785 IGAAGLLGFTMFFNVLFTLSLV 806
>SCRT_DROME (P45843) Protein scarlet| Length = 666 Score = 29.3 bits (64), Expect = 5.3 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = -2 Query: 356 CLSTGGDVLRGRGVDEGMRWVNVGVMMGFFLAYRIMCWAVLVRRASK 216 C TG DVL +E + N+ M+G + + ++ + L RRA K Sbjct: 619 CFHTGQDVLDKYSFNESNVYRNLLAMVGLYFGFHLLGYYCLWRRARK 665
>PDR2_NICPL (Q2PCF1) Pleiotropic drug resistance protein 2 (NpPDR2)| Length = 1461 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = -2 Query: 365 NGVCLSTGGDVLRGRGV--DEGMRWVNVGVMMGFFLAYRIMCWAVL 234 NG + G +L RG+ E W+++G + GF L + ++ A L Sbjct: 746 NGSQPTVGKTLLHARGLFTTESWYWISIGALFGFSLLFNVLFIAAL 791
>CPB2_CAEJA (Q6E3F0) Cytoplasmic polyadenylation element-binding protein 2| Length = 594 Score = 28.5 bits (62), Expect = 9.1 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +1 Query: 379 SPPIHATHLSLALPPYSLMSSRSSGYL 459 +PP +HLS+A PP+ ++ SGY+ Sbjct: 309 TPPAPLSHLSMASPPFGQINPFMSGYV 335 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,780,512 Number of Sequences: 219361 Number of extensions: 943925 Number of successful extensions: 3146 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 2923 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3144 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)