ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1S61A2_MOUSE (Q9JLR1) Protein transport protein Sec61 alpha subun... 102 7e-22
2S61A2_HUMAN (Q9H9S3) Protein transport protein Sec61 alpha subun... 102 7e-22
3SC61A_HALRO (Q25147) Protein transport protein Sec61 alpha subunit 101 9e-22
4S61A1_RAT (P61621) Protein transport protein Sec61 alpha subunit... 101 1e-21
5S61A1_PONPY (Q5R5L5) Protein transport protein Sec61 alpha subun... 101 1e-21
6S61A1_MOUSE (P61620) Protein transport protein Sec61 alpha subun... 101 1e-21
7S61A1_HUMAN (P61619) Protein transport protein Sec61 alpha subun... 101 1e-21
8S61A1_CANFA (P38377) Protein transport protein Sec61 alpha subun... 101 1e-21
9SC61A_PAGBO (Q8AY36) Protein transport protein Sec61 alpha subunit 99 4e-21
10SC61A_NOTAN (Q8AY35) Protein transport protein Sec61 alpha subunit 99 4e-21
11SC61A_HARAN (Q7T278) Protein transport protein Sec61 alpha subunit 99 4e-21
12SC61A_GADOC (Q8AY32) Protein transport protein Sec61 alpha subunit 99 4e-21
13SC61A_DISMA (Q7T277) Protein transport protein Sec61 alpha subunit 99 4e-21
14SC61A_BORSA (Q8AY33) Protein transport protein Sec61 alpha subunit 99 4e-21
15S61A2_ONCMY (Q98SN8) Protein transport protein Sec61 alpha subun... 99 4e-21
16S61A1_ONCMY (Q98SN9) Protein transport protein Sec61 alpha subun... 99 4e-21
17SC61A_HEMAM (Q8AY34) Protein transport protein Sec61 alpha subunit 99 6e-21
18SC61A_BOVVA (Q8AY31) Protein transport protein Sec61 alpha subunit 99 6e-21
19S61A1_BRARE (Q90ZM2) Protein transport protein Sec61 alpha subun... 99 6e-21
20S61A2_BRARE (Q90YL4) Protein transport protein Sec61 alpha subun... 99 8e-21
21SC61A_PYRSA (P38379) Protein transport protein Sec61 alpha subunit 92 7e-19
22SC61A_NEUCR (Q870W0) Protein transport protein SEC61 alpha subunit 84 3e-16
23SC61A_YARLI (P78979) Protein transport protein SEC61 alpha subunit 74 3e-13
24SC61A_HANAN (Q96TW8) Protein transport protein SEC61 alpha subunit 74 3e-13
25SC61A_KLULA (Q6CPY9) Protein transport protein SEC61 alpha subunit 71 2e-12
26SC61A_DEBHA (Q6BN08) Protein transport protein SEC61 alpha subunit 70 3e-12
27SC61A_ASHGO (Q752H7) Protein transport protein SEC61 alpha subunit 70 4e-12
28SC61A_CANGA (Q6FRY3) Protein transport protein SEC61 alpha subunit 69 5e-12
29SC61A_CANAL (Q9P8E3) Protein transport protein SEC61 alpha subunit 67 2e-11
30SECY_PYRFU (Q8U019) Preprotein translocase secY subunit (Protein... 67 3e-11
31SC61A_YEAST (P32915) Protein transport protein SEC61 alpha subunit 66 4e-11
32SC61A_SCHPO (P79088) Protein transport protein sec61 alpha subunit 65 7e-11
33SECY_PYRHO (O59442) Preprotein translocase secY subunit (Protein... 65 1e-10
34SECY_ARCFU (O28377) Preprotein translocase secY subunit (Protein... 64 2e-10
35SECY_PYRAB (Q9V1V8) Preprotein translocase secY subunit (Protein... 63 5e-10
36SECY_METTH (O26134) Preprotein translocase secY subunit (Protein... 58 1e-08
37SECY_METJA (Q60175) Preprotein translocase secY subunit (Protein... 58 1e-08
38SECY_METVA (P28541) Preprotein translocase secY subunit (Protein... 58 1e-08
39SECY_HALMA (P28542) Preprotein translocase secY subunit (Protein... 57 3e-08
40SECY_HALSA (Q9HPB1) Preprotein translocase secY subunit (Protein... 56 6e-08
41SECY_HALVO (Q977V3) Preprotein translocase secY subunit (Protein... 55 7e-08
42SECY_AERPE (Q9YDD0) Preprotein translocase secY subunit (Protein... 55 1e-07
43SECY_SULSO (Q9UX84) Preprotein translocase secY subunit (Protein... 52 6e-07
44SECY_SULAC (P49978) Preprotein translocase secY subunit (Protein... 50 2e-06
45YGMH_SCHPO (O42965) Hypothetical protein C19G7.17 in chromosome II 33 0.40
46GCSP_BDEBA (Q6MPZ6) Glycine dehydrogenase [decarboxylating] (EC ... 32 1.2
47ISW1_CAEEL (P41877) Chromatin remodelling complex ATPase chain i... 31 2.0
48AF10_MOUSE (O54826) Protein AF-10 31 2.0
49CNTN5_CHICK (Q90W79) Contactin-5 precursor (F11 axonin-1-related... 31 2.0
50VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (V... 30 2.6
51FER1_CAEEL (Q17388) Sperm vesicle fusion protein fer-1 29 7.5
52TMS1_YEAST (Q12116) Membrane protein TMS1 28 9.7
53AF10_HUMAN (P55197) Protein AF-10 28 9.7 
>S61A2_MOUSE (Q9JLR1) Protein transport protein Sec61 alpha subunit isoform 2|
           (Sec61 alpha-2)
          Length = 475

 Score =  102 bits (253), Expect = 7e-22
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGG 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A2_HUMAN (Q9H9S3) Protein transport protein Sec61 alpha subunit isoform 2|
           (Sec61 alpha-2)
          Length = 475

 Score =  102 bits (253), Expect = 7e-22
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGG 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>SC61A_HALRO (Q25147) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score =  101 bits (252), Expect = 9e-22
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+A E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGALSVLADFIGAIGSGTGILLAVTIIYQYFEIFVKEQA-EVGG 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A1_RAT (P61621) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score =  101 bits (251), Expect = 1e-21
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A1_PONPY (Q5R5L5) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score =  101 bits (251), Expect = 1e-21
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A1_MOUSE (P61620) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score =  101 bits (251), Expect = 1e-21
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A1_HUMAN (P61619) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score =  101 bits (251), Expect = 1e-21
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A1_CANFA (P38377) Protein transport protein Sec61 alpha subunit isoform 1|
           (Sec61 alpha-1)
          Length = 475

 Score =  101 bits (251), Expect = 1e-21
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIGAL+VLADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGALSVLADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>SC61A_PAGBO (Q8AY36) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>SC61A_NOTAN (Q8AY35) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>SC61A_HARAN (Q7T278) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>SC61A_GADOC (Q8AY32) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>SC61A_DISMA (Q7T277) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>SC61A_BORSA (Q8AY33) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A2_ONCMY (Q98SN8) Protein transport protein Sec61 alpha subunit isoform B|
          Length = 475

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A1_ONCMY (Q98SN9) Protein transport protein Sec61 alpha subunit isoform A|
          Length = 475

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEMGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>SC61A_HEMAM (Q8AY34) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 99.0 bits (245), Expect = 6e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>SC61A_BOVVA (Q8AY31) Protein transport protein Sec61 alpha subunit|
          Length = 475

 Score = 99.0 bits (245), Expect = 6e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A1_BRARE (Q90ZM2) Protein transport protein Sec61 alpha subunit isoform A|
          Length = 475

 Score = 99.0 bits (245), Expect = 6e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGS 469

Query: 288 FG 283
            G
Sbjct: 470 MG 471
to top
>S61A2_BRARE (Q90YL4) Protein transport protein Sec61 alpha subunit isoform B|
          Length = 475

 Score = 98.6 bits (244), Expect = 8e-21
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -3

Query: 468 ELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATELGF 289
           ELNRYIPTAAAFGG+CIG L+V+ADF+GAIGSGTGILLAVTIIYQYFE F KE+ +E+G 
Sbjct: 411 ELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQ-SEVGS 469

Query: 288 FG 283
            G
Sbjct: 470 VG 471
to top
>SC61A_PYRSA (P38379) Protein transport protein Sec61 alpha subunit|
          Length = 494

 Score = 92.0 bits (227), Expect = 7e-19
 Identities = 43/53 (81%), Positives = 51/53 (96%)
 Frame = -3

Query: 480 NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFET 322
           ++Q+ELNRYIPTAAAFGG+CIGAL+++ADFMGAIGSGTGILLAVT IYQ +ET
Sbjct: 413 SMQRELNRYIPTAAAFGGMCIGALSIVADFMGAIGSGTGILLAVTTIYQSWET 465
to top
>SC61A_NEUCR (Q870W0) Protein transport protein SEC61 alpha subunit|
          Length = 476

 Score = 83.6 bits (205), Expect = 3e-16
 Identities = 41/57 (71%), Positives = 46/57 (80%)
 Frame = -3

Query: 480 NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           ++ KEL R IPTAAAFGG CIGAL+V +D MGA+GSGTG LLAVTIIY YFE   KE
Sbjct: 408 SMYKELKRIIPTAAAFGGACIGALSVASDLMGALGSGTGTLLAVTIIYGYFEIAAKE 464
to top
>SC61A_YARLI (P78979) Protein transport protein SEC61 alpha subunit|
          Length = 471

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 36/54 (66%), Positives = 42/54 (77%)
 Frame = -3

Query: 471 KELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           KEL R IPTAAAFGG  IGAL+V +D +GA+ SGTGIL+AVT IY Y+E   KE
Sbjct: 411 KELKRIIPTAAAFGGATIGALSVASDLLGALSSGTGILMAVTTIYGYYEMAAKE 464
to top
>SC61A_HANAN (Q96TW8) Protein transport protein SEC61 alpha subunit|
          Length = 479

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 36/57 (63%), Positives = 42/57 (73%)
 Frame = -3

Query: 480 NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           ++ KEL R IPTAAAFGG  IGAL+V  D +G +GSGT ILLAVT IY Y+E   KE
Sbjct: 408 SVYKELKRIIPTAAAFGGASIGALSVACDLLGTLGSGTSILLAVTTIYSYYEIAAKE 464
to top
>SC61A_KLULA (Q6CPY9) Protein transport protein SEC61 alpha subunit|
          Length = 480

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -3

Query: 480 NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           N+ KEL + IPTAAAFGG  IGAL+V +D +G +GSGT IL+A T IY Y+E   KE
Sbjct: 409 NVYKELKKIIPTAAAFGGAVIGALSVGSDLLGTLGSGTSILMATTTIYGYYEVAAKE 465
to top
>SC61A_DEBHA (Q6BN08) Protein transport protein SEC61 alpha subunit|
          Length = 479

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 34/54 (62%), Positives = 40/54 (74%)
 Frame = -3

Query: 471 KELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           +EL + IPTAAAFGG  IGAL+V  D MG +GSGT ILL+VT IY Y+E   KE
Sbjct: 411 RELKKIIPTAAAFGGATIGALSVFCDLMGTLGSGTSILLSVTTIYGYYELAMKE 464
to top
>SC61A_ASHGO (Q752H7) Protein transport protein SEC61 alpha subunit|
          Length = 480

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 33/57 (57%), Positives = 43/57 (75%)
 Frame = -3

Query: 480 NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           ++ +EL + IPTAAAFGG  IGAL+V +D +G +GSGT IL+A T IY Y+ET  KE
Sbjct: 409 SVYRELKKVIPTAAAFGGATIGALSVGSDLLGTLGSGTSILMATTTIYGYYETAAKE 465
to top
>SC61A_CANGA (Q6FRY3) Protein transport protein SEC61 alpha subunit|
          Length = 479

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -3

Query: 480 NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           ++ KEL + IPTAAAFGG  IGAL+V +D +GA+GSG  ILLA T IY Y+E   KE
Sbjct: 408 SVYKELKKIIPTAAAFGGATIGALSVGSDLLGALGSGASILLATTTIYGYYEVAAKE 464
to top
>SC61A_CANAL (Q9P8E3) Protein transport protein SEC61 alpha subunit|
          Length = 479

 Score = 67.0 bits (162), Expect = 2e-11
 Identities = 34/54 (62%), Positives = 39/54 (72%)
 Frame = -3

Query: 471 KELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           KEL + I  AAAFGG  IGAL+V+ D MG +GSGT ILLAVT IY Y+E   KE
Sbjct: 411 KELKKIIHIAAAFGGATIGALSVVCDLMGTLGSGTSILLAVTTIYGYYELAVKE 464
to top
>SECY_PYRFU (Q8U019) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 468

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 29/61 (47%), Positives = 44/61 (72%)
 Frame = -3

Query: 477 LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATE 298
           L+K L RYIP    +G + +  + VLADF+GA+G+GTGILL V I+Y+++E   +E+ TE
Sbjct: 398 LEKVLQRYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQITE 457

Query: 297 L 295
           +
Sbjct: 458 M 458
to top
>SC61A_YEAST (P32915) Protein transport protein SEC61 alpha subunit|
          Length = 480

 Score = 66.2 bits (160), Expect = 4e-11
 Identities = 31/57 (54%), Positives = 41/57 (71%)
 Frame = -3

Query: 480 NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           ++ +EL + IPTAAAFGG  IGAL+V +D +G +GSG  IL+A T IY Y+E   KE
Sbjct: 409 SIYRELKKIIPTAAAFGGATIGALSVGSDLLGTLGSGASILMATTTIYGYYEAAAKE 465
to top
>SC61A_SCHPO (P79088) Protein transport protein sec61 alpha subunit|
          Length = 479

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 30/57 (52%), Positives = 39/57 (68%)
 Frame = -3

Query: 480 NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKE 310
           ++ KEL R IPTAA   G  +GAL V +D +GA+GSGT +LL  T IY Y+E  +KE
Sbjct: 408 SMYKELKRIIPTAAWLSGAVVGALAVASDLLGALGSGTAVLLCTTTIYGYYEQLQKE 464
to top
>SECY_PYRHO (O59442) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 468

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 27/61 (44%), Positives = 45/61 (73%)
 Frame = -3

Query: 477 LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATE 298
           L++ L +YIP    +G + +  ++VLADF+GA+G+GTGILL V I+Y+++E   +E+ TE
Sbjct: 398 LERVLQKYIPYVTFWGSLTVALISVLADFLGALGTGTGILLTVGILYRFYEEIAREQITE 457

Query: 297 L 295
           +
Sbjct: 458 M 458
to top
>SECY_ARCFU (O28377) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 493

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 31/63 (49%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
 Frame = -3

Query: 477 LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERA 304
           L++ L+RYIP     GG  IG LT++A+ +G IG  SGTG+LLAV+I Y+++E   KE+ 
Sbjct: 419 LERVLSRYIPKVTILGGAIIGILTLVANMLGTIGNVSGTGLLLAVSIAYRFYEDLAKEQL 478

Query: 303 TEL 295
           TE+
Sbjct: 479 TEM 481
to top
>SECY_PYRAB (Q9V1V8) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 468

 Score = 62.8 bits (151), Expect = 5e-10
 Identities = 26/61 (42%), Positives = 44/61 (72%)
 Frame = -3

Query: 477 LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATE 298
           L++ L +YIP    +G + +  + VLADF+GA+G+GTGILL V I+Y+++E   +E+ +E
Sbjct: 398 LERVLQKYIPYVTFWGSLTVALIAVLADFLGALGTGTGILLTVGILYRFYEEIAREQISE 457

Query: 297 L 295
           +
Sbjct: 458 M 458
to top
>SECY_METTH (O26134) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 456

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 25/60 (41%), Positives = 38/60 (63%)
 Frame = -3

Query: 474 QKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 295
           +K L RYIPT    GG  +G L  +AD  G++G GTG+LL V I+Y+ +E   +E+  ++
Sbjct: 387 EKILKRYIPTITILGGAFVGLLAFVADLTGSLGGGTGVLLTVGIVYRLYEEIAQEQLMDM 446
to top
>SECY_METJA (Q60175) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 436

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 24/61 (39%), Positives = 39/61 (63%)
 Frame = -3

Query: 477 LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATE 298
           ++  L RYIP         +G L  +A+F+GA+G GTG+LL V+I+Y+ +E   +E+ +E
Sbjct: 366 IEHRLKRYIPPLTVMSSAFVGFLATIANFIGALGGGTGVLLTVSIVYRMYEQLLREKVSE 425

Query: 297 L 295
           L
Sbjct: 426 L 426
to top
>SECY_METVA (P28541) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 438

 Score = 57.8 bits (138), Expect = 1e-08
 Identities = 25/62 (40%), Positives = 39/62 (62%)
 Frame = -3

Query: 480 NLQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERAT 301
           ++++ L RYI      G   +G L   ADF GA+G GTG+LL V+I+Y+ +E   +E+ +
Sbjct: 366 SIEQRLKRYIKPITVMGSAFVGFLAAAADFTGALGGGTGVLLTVSIVYRLYEQLVQEQLS 425

Query: 300 EL 295
           EL
Sbjct: 426 EL 427
to top
>SECY_HALMA (P28542) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 487

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -3

Query: 477 LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERA 304
           ++K L RYIP     GG  +G L V+A+ +G IG  SGTG+LL V+I Y+ +E   +E+ 
Sbjct: 416 IEKVLERYIPQVTVIGGALVGLLAVMANMLGTIGGVSGTGLLLTVSITYKLYEEIAEEQL 475

Query: 303 TEL 295
            E+
Sbjct: 476 MEM 478
to top
>SECY_HALSA (Q9HPB1) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 491

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = -3

Query: 477 LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG--SGTGILLAVTIIYQYFETFEKERA 304
           ++K + RYIP     GG  +G L V+A+ +G IG  SGTG+LL ++I Y+ +E   +E+ 
Sbjct: 417 IEKVMERYIPQVTVIGGALVGLLAVMANMLGTIGNVSGTGLLLTISITYKLYEEIAEEQM 476

Query: 303 TEL 295
            E+
Sbjct: 477 MEM 479
to top
>SECY_HALVO (Q977V3) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 488

 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = -3

Query: 477 LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIG-SGTGILLAVTIIYQYFETFEKERAT 301
           +++ + RYIP     GG  +G L V+A+ +G IG SGTG+LL V+I Y+ +E   +E+  
Sbjct: 416 IERVMERYIPQVTVIGGALVGLLAVMANMLGTIGASGTGLLLTVSITYKLYEEIAEEQLM 475

Query: 300 EL 295
           E+
Sbjct: 476 EM 477
to top
>SECY_AERPE (Q9YDD0) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 494

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 27/60 (45%), Positives = 37/60 (61%)
 Frame = -3

Query: 477 LQKELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATE 298
           L++ L RYI        + + AL ++AD  GA G+GTG+LLAV II QY+    +ERA E
Sbjct: 421 LERVLRRYIYPLTFLSSLIVAALVIVADIFGAYGTGTGLLLAVGIINQYYAMITRERALE 480
to top
>SECY_SULSO (Q9UX84) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 469

 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 26/57 (45%), Positives = 34/57 (59%)
 Frame = -3

Query: 465 LNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 295
           L RYI   A F  + +G + V A  +GA G+G GILLAVTI  QY+     ER+ E+
Sbjct: 403 LARYIYPLAFFSSIIVGLIAVFATLLGAYGTGIGILLAVTIAIQYYSLLAYERSLEM 459
to top
>SECY_SULAC (P49978) Preprotein translocase secY subunit (Protein transport|
           protein SEC61 alpha subunit homolog)
          Length = 463

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)
 Frame = -3

Query: 465 LNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERATEL 295
           L++YI     F  + +G + V+A F+G  G+G G+LLA+TI  QY+     ER  E+
Sbjct: 397 LSKYIYALGFFSSLIVGLIAVVATFLGTYGTGVGLLLAITIAMQYYNLLAYERTLEM 453
to top
>YGMH_SCHPO (O42965) Hypothetical protein C19G7.17 in chromosome II|
          Length = 475

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -3

Query: 471 KELNRYIPTAAAFGGVCIGALTVLADFMGAIGSGTGILLAVTIIYQYFE 325
           KEL + IP AA      +  L+V+A    +   G G+L+A  ++Y  FE
Sbjct: 415 KELEKIIPIAAKLSAFFVSILSVIAGIFAST-FGVGVLIASALVYASFE 462
to top
>GCSP_BDEBA (Q6MPZ6) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 958

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
 Frame = +2

Query: 227 KDLSCSHNMLPKLSCINQNPKKPSSVALSFSKVSKYWYMMVTANRIPVPEPIAPMKSAR- 403
           KDL+ +H+M+P  SC  +       V +S+ ++SK      TA  + + E I  ++    
Sbjct: 495 KDLTLTHSMIPLGSCTMKLNATTELVPVSWPEISKLHPFAPTAQAVGLIEMIHDLEKKLC 554

Query: 404 --TVNAPMHTPPNAAAVGMY 457
             T  A +   PNA + G Y
Sbjct: 555 DITGFAAVSLQPNAGSQGEY 574
to top
>ISW1_CAEEL (P41877) Chromatin remodelling complex ATPase chain isw-1 (EC|
           3.6.1.-)
          Length = 1009

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +2

Query: 284 PKKPSSVALSFSKVSKYWYMMVTANRIPVPEPIAPMKSARTVNAPMH 424
           PKK   V +  SK+ + WY  V    I +      ++ AR +N  MH
Sbjct: 358 PKKEVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMH 404
to top
>AF10_MOUSE (O54826) Protein AF-10|
          Length = 1068

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +3

Query: 24  YSQKHEKSTEDDR*RPRPCLDQSTTITGLKTHAASTDFSTVNKSGNLNRI 173
           + QKH+K  E     P P L  S T+T  KT+ ++++ S    SG+LNR+
Sbjct: 241 HKQKHKKQPE-----PSPALVPSLTVTTEKTYTSTSNNSI---SGSLNRL 282
to top
>CNTN5_CHICK (Q90W79) Contactin-5 precursor (F11 axonin-1-related protein 2)|
           (FAR-2)
          Length = 1027

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 296 SSVALSFSKVSKYWYMMVTANRIPVPEPIAPMKSARTVNAPMHTPP 433
           S++A+  +   +Y + +V  N+I   +P AP +  RT  A   TPP
Sbjct: 659 SAMAVELNPWVEYEFRVVATNKIGTGDPSAPSRMIRTNEAVPKTPP 704
to top
>VIT1_FUNHE (Q90508) Vitellogenin-1 precursor (Vitellogenin I) (VTG I) [Contains:|
            Lipovitellin-1 (LV1); Phosvitin (PV); Lipovitellin-2
            (LV2)]
          Length = 1704

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 19/62 (30%), Positives = 38/62 (61%)
 Frame = +1

Query: 277  SEPKETKLGRPLLLEGLKVLVYDGNSQQNTGS*TNCAHEISQNSQCTDAYSTKCSSSRDV 456
            SE +ET+ G P+L++  K+L    NS  ++ S ++ + E S++S+ + + S+   SSR +
Sbjct: 1056 SEDEETEEGGPVLVKLNKILSSRRNSSSSSSSSSSSSSE-SRSSRSSSSSSSSSRSSRKI 1114

Query: 457  SV 462
             +
Sbjct: 1115 DL 1116
to top
>FER1_CAEEL (Q17388) Sperm vesicle fusion protein fer-1|
          Length = 2034

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = -1

Query: 134  ICRCCV-CFQASY--GGRLVQARAWPSPVIF 51
            +C+CC+ CF+     G R V+ + +P PV+F
Sbjct: 1854 LCKCCIFCFETKCLCGKRKVKKKPFPKPVLF 1884
to top
>TMS1_YEAST (Q12116) Membrane protein TMS1|
          Length = 473

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 444 AAAFGGVCIGALTVLADFMGAIGSGTGILLAVTII 340
           A+ FGG C   +T  A  +G+   GT +L AV ++
Sbjct: 17  ASCFGGCCSNLVTKTASSLGSSSLGTRLLYAVWLL 51
to top
>AF10_HUMAN (P55197) Protein AF-10|
          Length = 1027

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = +3

Query: 24  YSQKHEKSTEDDR*RPRPCLDQSTTITGLKTHAASTDFSTVNKSGNLNRI 173
           + QKH+K  E     P P L  S T+T  KT+ ++++ S    SG+L R+
Sbjct: 241 HKQKHKKQPE-----PSPALVPSLTVTTEKTYTSTSNNSI---SGSLKRL 282


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,470,846
Number of Sequences: 219361
Number of extensions: 1496656
Number of successful extensions: 3749
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 3638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3743
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top