Clone Name | rbart25h09 |
---|---|
Clone Library Name | barley_pub |
>gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21-667A15, RP21-395M8 complete sequence Length = 350000 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aaacatatacgtacataggcatgc 90 |||||||||| ||||||||||||| Sbjct: 117790 aaacatatacctacataggcatgc 117813
>emb|AL732461.23| Mouse DNA sequence from clone RP23-95K12 on chromosome X, complete sequence Length = 245751 Score = 40.1 bits (20), Expect = 1.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aaacatatacgtacataggcatgc 90 |||||||||| ||||||||||||| Sbjct: 229209 aaacatatacctacataggcatgc 229232
>ref|XM_543402.2| PREDICTED: Canis familiaris similar to Deltex protein 1 (Deltex-1) (Deltex1) (hDTX1) (LOC486276), mRNA Length = 1279 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 37 acacccagaccatccgcat 55 ||||||||||||||||||| Sbjct: 842 acacccagaccatccgcat 860
>gb|AC138172.4| Mus musculus strain 129S6/SvEvTac clone rp22-554j24, complete sequence Length = 101923 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 aatttataggaatgatcaa 34 ||||||||||||||||||| Sbjct: 21594 aatttataggaatgatcaa 21612
>gb|AC166286.14| Medicago truncatula clone mth2-173c1, complete sequence Length = 114609 Score = 38.2 bits (19), Expect = 6.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 77 gtacataggcatgcatgattcat 99 ||||||| ||||||||||||||| Sbjct: 99190 gtacatatgcatgcatgattcat 99168
>gb|U28804.1|ENU28804 Emericella nidulans SAGA (sagA) mRNA, complete cds Length = 1528 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 78 tacataggcatgcatgatt 96 ||||||||||||||||||| Sbjct: 1478 tacataggcatgcatgatt 1460
>emb|BX890584.6| Mouse DNA sequence from clone RP23-160I11 on chromosome X, complete sequence Length = 120359 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 agggtgaaaacatatacgt 78 ||||||||||||||||||| Sbjct: 118309 agggtgaaaacatatacgt 118291
>gb|AC147053.3| Mus musculus BAC clone RP23-87B16 from 6, complete sequence Length = 218532 Score = 38.2 bits (19), Expect = 6.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 aatttataggaatgatcaa 34 ||||||||||||||||||| Sbjct: 6403 aatttataggaatgatcaa 6421 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 881,208 Number of Sequences: 3902068 Number of extensions: 881208 Number of successful extensions: 55295 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 55287 Number of HSP's gapped (non-prelim): 8 length of query: 133 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 112 effective length of database: 17,151,101,840 effective search space: 1920923406080 effective search space used: 1920923406080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)