>NKTR_MOUSE (P30415) NK-tumor recognition protein (Natural-killer cells|
            cyclophilin-related protein) (NK-TR protein)
          Length = 1453

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
 Frame = +1

Query: 1    RFQFRLNRY-ATTKNKRGANKGSSSATLQNVTVASKINSDRHTGEHQGPVFLNNSS---- 165
            R  FR NR  + T +KR  ++ +S  TL +  V  +  S RH    +    L+ +S    
Sbjct: 754  RAMFRSNRKKSVTSHKR--HRSNSEKTLHSKYVRGREKSSRHRKYSESRSSLDYTSDSDQ 811

Query: 166  ---QLFILP-KQKQEKSSPWGGQQSEGRALSRPWGGWQ 267
               Q++  P K+KQ K      +Q +GR   +P   W+
Sbjct: 812  SHVQVYSAPEKEKQGKVEALNDKQGKGREEGKPKPEWE 849

>YOT0_CAEEL (P34655) Hypothetical UPF0057 protein ZK632.10 in chromosome III|
          Length = 80

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 9/20 (45%), Positives = 17/20 (85%)
 Frame = -2

Query: 141 SLVLPSVSVAIDLGCNCNIL 82
           ++ LP ++V +D+GCNC++L
Sbjct: 10  AIFLPPIAVLLDVGCNCDLL 29

>LUZP1_RAT (Q9ESV1) Leucine zipper protein 1 (Leucine zipper motif-containing|
            protein)
          Length = 1051

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 18/51 (35%), Positives = 22/51 (43%)
 Frame = +3

Query: 141  TSFPEQLQSIIHPPETETRKILTLGRATIGRAGTQPAMGGLATYSMASGSE 293
            T F E  Q   HPPE  TRK        +G +G  P +    T S  + SE
Sbjct: 957  TDFLELEQPRSHPPEQGTRK--------VGNSGDAPELSSRRTQSSLTASE 999

>PURL_SYMTH (Q67KF8) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 778

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = -3

Query: 293 LASARHGVRCQPPHGRLSARPSDCCPPQGEDFSCFCFGR 177
           +A   HG+  QPP   L  R     PP+G   S  C GR
Sbjct: 447 VAPGAHGLTRQPPGEGLPGRSGQAGPPKGIAASVDCNGR 485

>YIS3_YEAST (P40563) Protein YIR003W|
          Length = 679

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 14/86 (16%)
 Frame = +1

Query: 55  NKGSSSATLQNVTVASKINSDRHTGEHQGPVFLNNSSQLFIL----------PKQKQEKS 204
           N G+SSAT  +  +A K      T +     F +  + LF L          P  +++ S
Sbjct: 417 NNGNSSATTASADIAKKHTDSSITSDTTKADFTSKLNGLFALPGMVNPGQLPPSLEKKLS 476

Query: 205 SPWG----GQQSEGRALSRPWGGWQR 270
           SP      G Q + +A + P GG +R
Sbjct: 477 SPDTESKLGPQDQSQAKTGPLGGTRR 502

>ENV_HV1Y2 (P35961) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 843

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 214 GGQQSEGRALSRPWGGWQRTPWRAE 288
           GG+ + G  + RP GG  R  WR+E
Sbjct: 445 GGKDTNGTEIFRPGGGDMRDNWRSE 469

>TFP11_MOUSE (Q9ERA6) Tuftelin-interacting protein 11 (Tuftelin-interacting|
           protein 39)
          Length = 838

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/53 (28%), Positives = 24/53 (45%)
 Frame = +3

Query: 135 PGTSFPEQLQSIIHPPETETRKILTLGRATIGRAGTQPAMGGLATYSMASGSE 293
           PG    +  Q II+P E + RK    G+  +G  G++     L  + +A   E
Sbjct: 165 PGRGLGKNAQGIINPIEAKQRK----GKGAVGAYGSERTTQSLQDFPVADSEE 213

>P60_LISIN (Q01836) Protein p60 precursor (Invasion-associated protein)|
          Length = 467

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/64 (21%), Positives = 30/64 (46%)
 Frame = +1

Query: 28  ATTKNKRGANKGSSSATLQNVTVASKINSDRHTGEHQGPVFLNNSSQLFILPKQKQEKSS 207
           +T  NK      +++A+  +    +  N++ +T  +QG     ++S L    ++   K+ 
Sbjct: 308 STNTNKTNTTNNNTNASTPSKNTNTNTNTNTNTNTNQGSTNNASASALIAEAQKHLGKAY 367

Query: 208 PWGG 219
            WGG
Sbjct: 368 SWGG 371

>APLP_LOCMI (Q9U943) Apolipophorins precursor [Contains: Apolipophorin-2|
            (Apolipophorin II) (apoLp-2); Apolipophorin-1
            (Apolipophorin I) (apoLp-1)]
          Length = 3380

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +1

Query: 76   TLQNVTVASKINSDRHTGEHQGPVFLNNSSQLFILPKQK-QEKSSPW--GGQQSEGRALS 246
            T+ NV + +  N+ + TGE  G      +    ILPK++ +   + W   G   +  +LS
Sbjct: 1743 TVSNVIIWNNENTLKLTGEAAGDEKEGRTKWDLILPKEEPRTLETTWSNAGDNKKAGSLS 1802

Query: 247  RPWGG 261
              WGG
Sbjct: 1803 FKWGG 1807

>OTP_PARLI (O76971) Homeobox protein orthopedia-related (PLOTP)|
          Length = 364

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 17/74 (22%)
 Frame = +3

Query: 117 PTHWGAPGT------SFPEQ------LQSIIHPPETETRKILTLGRATIGRAGT-----Q 245
           P   G PG+      S P Q       Q  ++    +T  + TL   T G  G+     Q
Sbjct: 239 PLMGGGPGSALALPPSLPRQGLGQSMQQQSVNCSMGQTTGLNTLSMGTNGSMGSMTSMYQ 298

Query: 246 PAMGGLATYSMASG 287
           P++GG+ T SM+SG
Sbjct: 299 PSLGGMTTGSMSSG 312


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.126    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,263,911
Number of Sequences: 219361
Number of extensions: 851550
Number of successful extensions: 2002
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2002
length of database: 80,573,946
effective HSP length: 73
effective length of database: 64,560,593
effective search space used: 1549454232
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)