>gb|AC103986.4| Homo sapiens, clone RP11-197M8, complete sequence
          Length = 160981

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 132   gcaccagggaccagttttcctgaa 155
             ||||||||||||||||||||||||
Sbjct: 55618 gcaccagggaccagttttcctgaa 55595

>gb|AC009432.7|AC009432 Homo sapiens chromosome 15, clone RP11-57P19, complete sequence
          Length = 199609

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 132    gcaccagggaccagttttcctgaa 155
              ||||||||||||||||||||||||
Sbjct: 196203 gcaccagggaccagttttcctgaa 196226

>ref|NM_186625.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 654

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 134 accagggaccagttttcctgaacaactccag 164
           ||||||||| ||||||||||||| |||||||
Sbjct: 559 accagggacaagttttcctgaaccactccag 529

>ref|XM_507357.1| PREDICTED Oryza sativa (japonica cultivar-group), P0592C06.117 mRNA
          Length = 664

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 134 accagggaccagttttcctgaacaactccag 164
           ||||||||| ||||||||||||| |||||||
Sbjct: 561 accagggacaagttttcctgaaccactccag 531

>ref|XM_506226.2| PREDICTED Oryza sativa (japonica cultivar-group), P0592C06.117 mRNA
          Length = 689

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 134 accagggaccagttttcctgaacaactccag 164
           ||||||||| ||||||||||||| |||||||
Sbjct: 586 accagggacaagttttcctgaaccactccag 556

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 134     accagggaccagttttcctgaacaactccag 164
               ||||||||| ||||||||||||| |||||||
Sbjct: 6831798 accagggacaagttttcctgaaccactccag 6831768

>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0592C06
          Length = 160071

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 134    accagggaccagttttcctgaacaactccag 164
              ||||||||| ||||||||||||| |||||||
Sbjct: 125932 accagggacaagttttcctgaaccactccag 125902

>dbj|AK103131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120B22, full
           insert sequence
          Length = 655

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 134 accagggaccagttttcctgaacaactccag 164
           ||||||||| ||||||||||||| |||||||
Sbjct: 559 accagggacaagttttcctgaaccactccag 529

>dbj|AK100823.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122I22, full
           insert sequence
          Length = 689

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 134 accagggaccagttttcctgaacaactccag 164
           ||||||||| ||||||||||||| |||||||
Sbjct: 586 accagggacaagttttcctgaaccactccag 556

>dbj|AK060442.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-E04, full
           insert sequence
          Length = 664

 Score = 46.1 bits (23), Expect = 0.063
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 134 accagggaccagttttcctgaacaactccag 164
           ||||||||| ||||||||||||| |||||||
Sbjct: 561 accagggacaagttttcctgaaccactccag 531

>gb|BT013938.1| Lycopersicon esculentum clone 132961F, mRNA sequence
          Length = 1286

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 ttttcctgaacaactccagt 165
           ||||||||||||||||||||
Sbjct: 977 ttttcctgaacaactccagt 958

>gb|AC102312.11| Mus musculus chromosome 10, clone RP24-428L4, complete sequence
          Length = 182940

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     agattccaatttagattaaa 20
             ||||||||||||||||||||
Sbjct: 90916 agattccaatttagattaaa 90935

>gb|AC121155.2| Homo sapiens BAC clone RP11-469P13 from 4, complete sequence
          Length = 92400

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   gagcaccagggaccagtttt 149
             ||||||||||||||||||||
Sbjct: 67937 gagcaccagggaccagtttt 67918

>gb|U41019.2| Caenorhabditis elegans cosmid C04E7, complete sequence
          Length = 37360

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   aaacagaaacaagaaaaatc 203
             ||||||||||||||||||||
Sbjct: 10573 aaacagaaacaagaaaaatc 10554

>emb|AL663105.4| Human DNA sequence from clone RP4-743D20 on chromosome 1 Contains a novel
              gene and a CpG island, complete sequence
          Length = 157062

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 156    caactccagtcaattattca 175
              ||||||||||||||||||||
Sbjct: 123400 caactccagtcaattattca 123381

>emb|CR857972.1| Pongo pygmaeus mRNA; cDNA DKFZp469A1813 (from clone DKFZp469A1813)
          Length = 4213

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gaaacagaaacaagaaaaat 202
            ||||||||||||||||||||
Sbjct: 3399 gaaacagaaacaagaaaaat 3418

>gb|AC093853.3| Homo sapiens BAC clone RP11-502M1 from 4, complete sequence
          Length = 212207

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 130   gagcaccagggaccagtttt 149
             ||||||||||||||||||||
Sbjct: 64626 gagcaccagggaccagtttt 64607

>gb|AC069074.11| Mus musculus 10 BAC RP23-243G3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190081

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      agattccaatttagattaaa 20
              ||||||||||||||||||||
Sbjct: 160134 agattccaatttagattaaa 160115

>ref|NM_075688.1| Caenorhabditis elegans C04E7.3 (C04E7.3) mRNA, complete cds
          Length = 1557

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 aaacagaaacaagaaaaatc 203
           ||||||||||||||||||||
Sbjct: 601 aaacagaaacaagaaaaatc 620

>gb|AF161372.1|AF161372 Homo sapiens HSPC254 mRNA, partial cds
          Length = 959

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  caacaaaaaacaagcgcggg 51
           ||||||||||||||||||||
Sbjct: 131 caacaaaaaacaagcgcggg 150

>dbj|AB193043.1| Lycopersicon esculentum LeTH3 mRNA for tobamovirus multiplication 1
           homolog 3, complete cds
          Length = 1278

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 ttttcctgaacaactccagt 165
           ||||||||||||||||||||
Sbjct: 976 ttttcctgaacaactccagt 957

>gb|AC079610.4| Homo sapiens BAC clone RP11-105N14 from 2, complete sequence
          Length = 161031

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   gaaacagaaacaagaaaaat 202
             ||||||||||||||||||||
Sbjct: 77306 gaaacagaaacaagaaaaat 77287

>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete
             sequence
          Length = 146640

 Score = 40.1 bits (20), Expect = 3.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    gcaaaatgttacagttgcat 100
             ||||||||||||||||||||
Sbjct: 39986 gcaaaatgttacagttgcat 40005


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,832,947
Number of Sequences: 3902068
Number of extensions: 2832947
Number of successful extensions: 58464
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58416
Number of HSP's gapped (non-prelim): 48
length of query: 295
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 273
effective length of database: 17,147,199,772
effective search space: 4681185537756
effective search space used: 4681185537756
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)