ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart25h01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103941.1| Zea mays PCO095480 mRNA sequence Length = 1596 Score = 115 bits (58), Expect = 1e-22 Identities = 103/118 (87%) Strand = Plus / Minus Query: 362 caaactaatcaattttgacatttgaatataggagcgtgtccttggtaagcggcatgttca 421 |||||||||| || |||||||| || || ||||| |||||| ||||||| |||||||||| Sbjct: 1230 caaactaatcgatcttgacattcgagtacaggagggtgtccctggtaagtggcatgttca 1171 Query: 422 tgagcaggcaaatcccaatgagggttgagacaagaaggatgatccctgtaatccatgc 479 | |||| ||||| ||| ||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 1170 taagcaagcaaacccctatgagagttgaaacaagcaggatgatccctgtaatccatgc 1113
>ref|XM_483854.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1538 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Minus Query: 366 ctaatcaattttgacatttgaatataggagcgtgtccttggtaagcggcatgttcatgag 425 |||||| || || ||||| ||||| ||||| |||||| ||||||| ||||| ||||| || Sbjct: 1319 ctaatcgatcttcacattcgaatacaggagggtgtccctggtaagtggcatattcataag 1260 Query: 426 caggcaaatcccaatgagggttgagacaagaaggatgatccctgtaatccatgcaagact 485 || ||||| ||||||||| || ||||||||||| |||||||||||||||||||| | ||| Sbjct: 1259 caagcaaaccccaatgagagtagagacaagaagaatgatccctgtaatccatgccaaact 1200 Query: 486 caatctaacaag 497 | ||||||||| Sbjct: 1199 ctttctaacaag 1188
>dbj|AK065186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D24, full insert sequence Length = 1538 Score = 111 bits (56), Expect = 2e-21 Identities = 113/132 (85%) Strand = Plus / Minus Query: 366 ctaatcaattttgacatttgaatataggagcgtgtccttggtaagcggcatgttcatgag 425 |||||| || || ||||| ||||| ||||| |||||| ||||||| ||||| ||||| || Sbjct: 1319 ctaatcgatcttcacattcgaatacaggagggtgtccctggtaagtggcatattcataag 1260 Query: 426 caggcaaatcccaatgagggttgagacaagaaggatgatccctgtaatccatgcaagact 485 || ||||| ||||||||| || ||||||||||| |||||||||||||||||||| | ||| Sbjct: 1259 caagcaaaccccaatgagagtagagacaagaagaatgatccctgtaatccatgccaaact 1200 Query: 486 caatctaacaag 497 | ||||||||| Sbjct: 1199 ctttctaacaag 1188
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 435 cccaatgagggttgagacaagaaggatgatccctgtaatccatgcaagactcaatctaac 494 ||||||||| || ||||||||||| |||||||||||||||||||| | |||| |||||| Sbjct: 28391396 cccaatgagagtagagacaagaagaatgatccctgtaatccatgccaaactctttctaac 28391337 Query: 495 aag 497 ||| Sbjct: 28391336 aag 28391334
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 69.9 bits (35), Expect = 8e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 435 cccaatgagggttgagacaagaaggatgatccctgtaatccatgcaagactcaatctaac 494 ||||||||| || ||||||||||| |||||||||||||||||||| | |||| |||||| Sbjct: 120202 cccaatgagagtagagacaagaagaatgatccctgtaatccatgccaaactctttctaac 120143 Query: 495 aag 497 ||| Sbjct: 120142 aag 120140
>emb|AL596220.9| Human DNA sequence from clone RP11-295K2 on chromosome 1 Contains the 5' end of the TPR gene for translocated promoter region (to activated MET oncogene), a novel gene, the 3' end of the PDC gene for phosducin and a novel gene, complete sequence Length = 130266 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 283 aaccccagggcccaaaggaaaaag 306 |||||||||||||||||||||||| Sbjct: 37045 aaccccagggcccaaaggaaaaag 37068
>gb|AF172081.1|AF172081 Homo sapiens HPC1 locus clone 173P17 genomic sequence Length = 36853 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 283 aaccccagggcccaaaggaaaaag 306 |||||||||||||||||||||||| Sbjct: 1 aaccccagggcccaaaggaaaaag 24
>gb|AC149541.1| Populus trichocarpa clone Pop1-12C14, complete sequence Length = 88772 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 142 tttttatttatttatggaaaag 163 |||||||||||||||||||||| Sbjct: 61860 tttttatttatttatggaaaag 61839
>gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete sequence Length = 114956 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttatgg 158 |||||||||||||||||||||| Sbjct: 107084 aactatttttatttatttatgg 107105
>gb|AC149494.4| Medicago truncatula clone mth2-116m7, complete sequence Length = 95710 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 atttttatttatttatggaaaa 162 |||||||||||||||||||||| Sbjct: 43858 atttttatttatttatggaaaa 43879
>gb|AC105910.10| Homo sapiens chromosome 8, clone CTD-2036J7, complete sequence Length = 190836 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 tcaactatttttatttatttat 156 |||||||||||||||||||||| Sbjct: 76573 tcaactatttttatttatttat 76594
>emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 on chromosome 3, complete sequence Length = 152399 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttatgg 158 |||||||||||||||||||||| Sbjct: 3294 aactatttttatttatttatgg 3273
>gb|AC133498.2| Mus musculus BAC clone RP24-241K8 from chromosome 13, complete sequence Length = 159112 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 gaaaattcatatgcagcacaa 364 ||||||||||||||||||||| Sbjct: 13729 gaaaattcatatgcagcacaa 13749
>emb|AL163301.2|HS21C101 Homo sapiens chromosome 21 segment HS21C101 Length = 340000 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 acacagggtggacagcaagcccaga 264 ||||||||||||||| ||||||||| Sbjct: 94774 acacagggtggacaggaagcccaga 94798
>gb|AC140029.19| Medicago truncatula clone mth2-20g24, complete sequence Length = 124043 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 86123 caactatttttatttatttat 86143
>gb|AC152348.7| Medicago truncatula clone mth2-52e17, complete sequence Length = 122070 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 106798 caactatttttatttatttat 106778
>gb|AF491780.1| Homo sapiens neuregulin 1 (NRG1) gene, partial cds, alternatively spliced Length = 1285452 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 aacaatacagtacaatattcg 109 ||||||||||||||||||||| Sbjct: 1194730 aacaatacagtacaatattcg 1194750
>emb|AL354826.6| Human DNA sequence from clone RP11-286M16 on chromosome 1 Contains a novel gene, complete sequence Length = 203279 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 aaacatccaatatcatgtatt 26 ||||||||||||||||||||| Sbjct: 7634 aaacatccaatatcatgtatt 7614
>emb|AL109944.19|HSJ737A23 Human DNA sequence from clone RP4-737A23 on chromosome 1p31.2-32.1 Contains part of the DAB1 gene for disabled homolog 1 (Drosophila) and two novel genes, complete sequence Length = 140373 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 19759 caactatttttatttatttat 19739
>gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189219 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 aaactaatcaattttgacatt 383 ||||||||||||||||||||| Sbjct: 41459 aaactaatcaattttgacatt 41479
>gb|AY678298.1| Lycopersicon esculentum clone 56B23 chromosome 6, genomic sequence Length = 198768 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 tttttatttatttatggaaaa 162 ||||||||||||||||||||| Sbjct: 98891 tttttatttatttatggaaaa 98911
>gb|AC103702.3| Homo sapiens chromosome 17, clone RP11-357H14, complete sequence Length = 187386 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 18177 caactatttttatttatttat 18157
>gb|AF165145.4| Homo sapiens chromosome 8 clone GS1-194o16 map 8p23, complete sequence Length = 131299 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 27109 caactatttttatttatttat 27089
>gb|AC093914.3| Homo sapiens BAC clone RP11-779N9 from 4, complete sequence Length = 170536 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 aaaattcatatgcagcacaaa 365 ||||||||||||||||||||| Sbjct: 108900 aaaattcatatgcagcacaaa 108920
>gb|AC083977.5| Homo sapiens chromosome 8, clone RP11-317J8, complete sequence Length = 212555 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 aacaatacagtacaatattcg 109 ||||||||||||||||||||| Sbjct: 123011 aacaatacagtacaatattcg 123031
>gb|AC083837.4| Homo sapiens chromosome 8, clone RP11-79H23, complete sequence Length = 166114 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ctcaactatttttatttattt 154 ||||||||||||||||||||| Sbjct: 41369 ctcaactatttttatttattt 41349
>gb|AF410153.1| Swinepox virus isolate 17077-99, complete genome Length = 146454 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 tttttatttatttatggaaaa 162 ||||||||||||||||||||| Sbjct: 19693 tttttatttatttatggaaaa 19713
>gb|AC013561.9| Homo sapiens chromosome 8, clone RP11-301H15, complete sequence Length = 185249 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 aacaatacagtacaatattcg 109 ||||||||||||||||||||| Sbjct: 148465 aacaatacagtacaatattcg 148445
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 cctgtaatccatgcaagactc 486 ||||||||||||||||||||| Sbjct: 2576573 cctgtaatccatgcaagactc 2576553
>gb|AC091179.5| Homo sapiens chromosome 17, clone CTD-2377D24, complete sequence Length = 85424 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 83353 caactatttttatttatttat 83333
>gb|AC016031.6| Homo sapiens, clone RP11-12J8, complete sequence Length = 139690 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 ctcaactatttttatttattt 154 ||||||||||||||||||||| Sbjct: 29434 ctcaactatttttatttattt 29454
>tpg|BK000383.1| TPA: TPA_exp: Homo sapiens neuregulin 1 isoform (NRG1) gene, alternatively spliced, complete cds Length = 1421559 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 aacaatacagtacaatattcg 109 ||||||||||||||||||||| Sbjct: 1194730 aacaatacagtacaatattcg 1194750
>gb|AC096736.3| Homo sapiens BAC clone RP11-171N4 from 4, complete sequence Length = 172989 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 gtgatcccaatgaatatccaa 56 ||||||||||||||||||||| Sbjct: 9832 gtgatcccaatgaatatccaa 9852
>gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosome 13, complete sequence Length = 196991 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 106582 caactatttttatttatttat 106602
>gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone RP11-361K8, complete sequence Length = 168215 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 22034 caactatttttatttatttat 22014
>gb|AC037459.16| Homo sapiens chromosome 8, clone RP11-582J16, complete sequence Length = 174888 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 133 cctcaactatttttatttatt 153 ||||||||||||||||||||| Sbjct: 131719 cctcaactatttttatttatt 131739
>gb|AC153118.4| Monodelphis domestica clone VMRC6-501L16, complete sequence Length = 61064 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 ttgacatttgaatataggagc 396 ||||||||||||||||||||| Sbjct: 36552 ttgacatttgaatataggagc 36532
>emb|AJ249689.1|SVI249689 Swinepox virus p42 gene for envelope protein, strain Kasza Length = 1380 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 142 tttttatttatttatggaaaa 162 ||||||||||||||||||||| Sbjct: 110 tttttatttatttatggaaaa 90
>gb|AC148214.3| Monodelphis domestica clone VMRC6-307F8, complete sequence Length = 163118 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 ttgacatttgaatataggagc 396 ||||||||||||||||||||| Sbjct: 2009 ttgacatttgaatataggagc 1989
>emb|BX927095.15| Zebrafish DNA sequence from clone CH211-202E13 in linkage group 17, complete sequence Length = 211277 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 ctcaactatttttatttattt 154 ||||||||||||||||||||| Sbjct: 26620 ctcaactatttttatttattt 26600
>dbj|AP004451.1| Salarias fasciatus mitochondrial DNA, complete genome Length = 16496 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 taaaccccagggcccaaagga 301 ||||||||||||||||||||| Sbjct: 6482 taaaccccagggcccaaagga 6462
>emb|AL807828.14| Mouse DNA sequence from clone RP23-184N11 on chromosome 4, complete sequence Length = 174593 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 71909 caactatttttatttatttat 71929
>gb|AC154355.1| Mus musculus BAC clone RP23-220N4 from 13, complete sequence Length = 168447 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 149959 caactatttttatttatttat 149979
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 ttgacatttgaatataggagc 396 ||||||||||||||||||||| Sbjct: 244852 ttgacatttgaatataggagc 244832
>dbj|AP001579.1| Homo sapiens genomic DNA, chromosome 21q22.3, clone:B774F24, D21S171-LA161 region, complete sequence Length = 139270 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 240 acacagggtggacagcaagcccaga 264 ||||||||||||||| ||||||||| Sbjct: 19804 acacagggtggacaggaagcccaga 19828
>dbj|AB020864.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 7/11 Length = 100000 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 136 caactatttttatttatttat 156 ||||||||||||||||||||| Sbjct: 36413 caactatttttatttatttat 36433
>gb|AC108413.4| Mus musculus chromosome 8, clone RP23-472M11, complete sequence Length = 174540 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 tatttatttatggaaaagca 165 |||||||||||||||||||| Sbjct: 36220 tatttatttatggaaaagca 36201
>gb|AC169985.2| Mus musculus BAC clone RP23-289G14 from chromosome 13, complete sequence Length = 218393 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 tttatttatttatggaaaag 163 |||||||||||||||||||| Sbjct: 86581 tttatttatttatggaaaag 86562
>ref|NM_001030653.1| Gallus gallus peptidylprolyl isomerase (cyclophilin)-like 2 (PPIL2), mRNA Length = 2782 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ttcacatactggtattttacaaca 92 ||||||||||||||| |||||||| Sbjct: 841 ttcacatactggtatcttacaaca 818
>gb|AF003140.2| Caenorhabditis elegans cosmid C44E4, complete sequence Length = 35269 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 atttttatttatttatggaa 160 |||||||||||||||||||| Sbjct: 13410 atttttatttatttatggaa 13429
>gb|AC150577.4| Bos taurus BAC CH240-268P24 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 167618 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ctcagtgtccctactgtaaa 284 |||||||||||||||||||| Sbjct: 94437 ctcagtgtccctactgtaaa 94456
>gb|AC185132.1| Mus musculus BAC clone RP24-109C1 from chromosome y, complete sequence Length = 169136 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 8926 aactatttttatttatttat 8907
>gb|AC134565.5| Mus musculus BAC clone RP24-185F21 from chromosome Y, complete sequence Length = 185195 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 115741 aactatttttatttatttat 115722
>gb|AC134531.3| Mus musculus BAC clone RP24-528F18 from chromosome Y, complete sequence Length = 130027 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 101202 aactatttttatttatttat 101221
>gb|AC131783.4| Mus musculus BAC clone RP24-377P12 from chromosome Y, complete sequence Length = 223801 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 133418 aactatttttatttatttat 133437
>gb|AC129209.4| Mus musculus BAC clone RP24-318B5 from chromosome Y, complete sequence Length = 177935 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 133703 aactatttttatttatttat 133722
>gb|AC127572.3| Mus musculus BAC clone RP24-231A11 from chromosome Y, complete sequence Length = 134145 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 14073 aactatttttatttatttat 14092
>gb|AC140371.3| Mus musculus BAC clone RP24-220G21 from chromosome Y, complete sequence Length = 190597 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 145748 aactatttttatttatttat 145767
>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence Length = 176549 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 155366 aactatttttatttatttat 155385
>gb|AC145346.3| Mus musculus BAC clone RP24-76G8 from chromosome Y, complete sequence Length = 207267 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 187654 aactatttttatttatttat 187673
>gb|AC147111.2| Mus musculus BAC clone RP24-111K19 from chromosome Y, complete sequence Length = 181226 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 58877 aactatttttatttatttat 58896
>gb|AC140401.4| Mus musculus BAC clone RP24-89O8 from chromosome Y, complete sequence Length = 244637 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 55047 aactatttttatttatttat 55028
>gb|AC147259.3| Mus musculus BAC clone RP24-178N16 from chromosome Y, complete sequence Length = 149994 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 119505 aactatttttatttatttat 119524
>gb|AC147265.2| Mus musculus BAC clone RP24-233K2 from chromosome Y, complete sequence Length = 171430 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 68929 aactatttttatttatttat 68948
>gb|AC147155.2| Mus musculus BAC clone RP24-341L19 from chromosome Y, complete sequence Length = 156459 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 66926 aactatttttatttatttat 66945
>gb|AC148325.2| Mus musculus BAC clone RP24-407P18 from chromosome Y, complete sequence Length = 133083 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 86018 aactatttttatttatttat 86037
>gb|AC146633.2| Mus musculus BAC clone RP24-483C21 from chromosome Y, complete sequence Length = 172652 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 9148 aactatttttatttatttat 9167
>gb|AC147135.2| Mus musculus BAC clone RP24-475E12 from chromosome Y, complete sequence Length = 222469 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 139110 aactatttttatttatttat 139129
>gb|AC183975.1| Mus musculus BAC clone RP24-352C21 from chromosome y, complete sequence Length = 129948 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 12271 aactatttttatttatttat 12290
>gb|AC098390.6| Rattus norvegicus 1 BAC CH230-1M24 (Children's Hospital Oakland Research Institute) complete sequence Length = 196477 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tttttatttatttatggaaa 161 |||||||||||||||||||| Sbjct: 77760 tttttatttatttatggaaa 77779
>gb|AC116977.2| Dictyostelium discoideum chromosome 2 map 5515173-5817331 strain AX4, complete sequence Length = 302156 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tatttttatttatttatgga 159 |||||||||||||||||||| Sbjct: 102393 tatttttatttatttatgga 102374
>gb|AC175670.3| Mus musculus BAC clone RP24-304I16 from chromosome y, complete sequence Length = 168071 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 157860 aactatttttatttatttat 157879
>gb|AC175390.2| Mus musculus BAC clone RP24-108F5 from chromosome y, complete sequence Length = 179677 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 53565 aactatttttatttatttat 53584
>gb|AC140920.4| Mus musculus BAC clone RP24-498A2 from chromosome Y, complete sequence Length = 164438 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 42199 aactatttttatttatttat 42218
>gb|AC093799.2| Homo sapiens BAC clone RP11-307C18 from 7, complete sequence Length = 156195 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 84567 aactatttttatttatttat 84548
>gb|AC005531.2| Homo sapiens PAC clone RP4-701O16 from 7, complete sequence Length = 161910 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 159411 aactatttttatttatttat 159392
>gb|AC129191.4| Mus musculus BAC clone RP24-81F10 from chromosome Y, complete sequence Length = 241616 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 74377 aactatttttatttatttat 74358
>gb|AC140386.4| Mus musculus BAC clone RP24-88H19 from chromosome Y, complete sequence Length = 222469 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 139110 aactatttttatttatttat 139129
>gb|AC142253.3| Mus musculus BAC clone RP24-555O3 from chromosome Y, complete sequence Length = 153917 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 92080 aactatttttatttatttat 92061
>emb|CR788310.10| Zebrafish DNA sequence from clone DKEY-74F15 in linkage group 2, complete sequence Length = 244700 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 12910 aactatttttatttatttat 12891
>gb|AC127345.4| Mus musculus BAC clone RP23-217K23 from chromosome 5, complete sequence Length = 210748 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 cccagggcccaaaggaaaaagcca 309 ||||||||||| |||||||||||| Sbjct: 179065 cccagggcccacaggaaaaagcca 179042
>gb|AC122241.4| Mus musculus BAC clone RP23-146M20 from chromosome 15, complete sequence Length = 195429 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 103833 aactatttttatttatttat 103814
>gb|AC115632.4| Mus musculus BAC clone RP24-136O10 from chromosome 13, complete sequence Length = 166481 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 tatttttatttatttatggaaaag 163 ||||||||||||||||| |||||| Sbjct: 60715 tatttttatttatttatagaaaag 60738
>gb|AC122840.3| Mus musculus BAC clone RP23-193M8 from 13, complete sequence Length = 216326 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 tatttttatttatttatggaaaag 163 ||||||||||||||||| |||||| Sbjct: 152967 tatttttatttatttatagaaaag 152990
>gb|AC113316.14| Mus musculus chromosome 5, clone RP23-441I24, complete sequence Length = 247892 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 atgtttatgctacacagggt 248 |||||||||||||||||||| Sbjct: 124751 atgtttatgctacacagggt 124770
>gb|BC034259.1| Mus musculus aldo-keto reductase family 1, member C18, mRNA (cDNA clone MGC:25953 IMAGE:4238589), complete cds Length = 1117 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 tatttttatttatttatggaaaag 163 ||||||||||||||||| |||||| Sbjct: 1083 tatttttatttatttatagaaaag 1060
>ref|XM_739480.1| Plasmodium chabaudi chabaudi protein kinase (PC000063.04.0) partial mRNA Length = 1257 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 atttttatttatttatggaaaagc 164 ||||||||||| |||||||||||| Sbjct: 287 atttttatttaattatggaaaagc 310
>gb|AC163225.4| Mus musculus chromosome 8, clone RP23-319L22, complete sequence Length = 192661 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 tatttatttatggaaaagca 165 |||||||||||||||||||| Sbjct: 104976 tatttatttatggaaaagca 104957
>gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete sequence Length = 145073 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 66018 aactatttttatttatttat 66037 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 57372 aactatttttatttatttat 57353
>gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete sequence Length = 142205 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 84834 aactatttttatttatttat 84853 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 76188 aactatttttatttatttat 76169
>emb|AL731576.9| Human DNA sequence from clone RP11-178G16 on chromosome 10 Contains the 3' end of the VCL gene for vinculin, a novel gene, the AP3M1 gene for adaptor-related protein complex 3 mu 1 subunit, the 5' end of the ADK gene for adenosine kinase and two CpG islands, complete sequence Length = 104656 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 aaaggaaaaagccaagcatg 315 |||||||||||||||||||| Sbjct: 11886 aaaggaaaaagccaagcatg 11905
>emb|AL731566.7| Human DNA sequence from clone RP11-500G22 on chromosome 10 Contains the 5' end of the ATE1 gene for arginyltransferase 1, a novel gene, the gene for a novel protein (FLJ20003), the 5' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1) and three CpG islands, complete sequence Length = 125922 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 cctcaactatttttatttatttat 156 |||||| ||||||||||||||||| Sbjct: 88597 cctcaaatatttttatttatttat 88574
>emb|AL627344.8| Human DNA sequence from clone RP11-39H24 on chromosome 13, complete sequence Length = 97057 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 28867 aactatttttatttatttat 28886
>emb|AL591206.9| Human DNA sequence from clone RP11-151J10 on chromosome 9 Contains the 5' end of a novel gene (FLJ20060) (contains FLJ12902, KIAA1574), the ADFP gene for adipose differentiation-related protein (ADRP) and 2 CpG islands, complete sequence Length = 130713 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 20329 aactatttttatttatttat 20348
>emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chromosome 6 Contains a fem-1 homolog a (C. elegans) (FEM1A) pseudogene, a keratin 18 (KRT18) pseudogene, a laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1)(RPSA) pseudogene, a hepatocellular carcinoma-related putative tumor suppressor (LPTS) pseudogene and the 3' end of a novel gene, complete sequence Length = 210107 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 aattcatatgcagcacaaac 366 |||||||||||||||||||| Sbjct: 99716 aattcatatgcagcacaaac 99735
>gb|AC109666.7| Rattus norvegicus 4 BAC CH230-252C14 (Children's Hospital Oakland Research Institute) complete sequence Length = 214386 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 51988 aactatttttatttatttat 51969
>emb|AL157399.14| Human DNA sequence from clone RP11-75M12 on chromosome 10q11.21-21.1 Contains the PRKG1 gene for protein kinase cGMP-dependent type I, complete sequence Length = 104959 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 4240 aactatttttatttatttat 4221
>emb|AL138720.19| Human DNA sequence from clone RP11-146I2 on chromosome 6 Contains a novel gene, the 3' end of a novel gene and a CpG island, complete sequence Length = 156615 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 137653 aactatttttatttatttat 137634
>emb|Y15801.1|HSY15801 Homo sapiens mRNA for PRKY protein Length = 7268 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tcaactatttttatttattt 154 |||||||||||||||||||| Sbjct: 5344 tcaactatttttatttattt 5325
>gb|AC166356.1| Mus musculus BAC clone RP23-410F8 from chromosome 15, complete sequence Length = 165082 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 142983 aactatttttatttatttat 142964
>gb|AC182455.3| Mus musculus BAC clone RP24-77P23 from chromosome y, complete sequence Length = 216299 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 95249 aactatttttatttatttat 95230
>gb|AC177804.3| Mus musculus BAC clone RP24-223C7 from chromosome y, complete sequence Length = 160566 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 99817 aactatttttatttatttat 99798
>emb|CR382342.5| Zebrafish DNA sequence from clone DKEY-208E17 in linkage group 14, complete sequence Length = 67870 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 actatttttatttatttatggaaa 161 |||||||||||| ||||||||||| Sbjct: 3361 actatttttattaatttatggaaa 3384
>emb|BX640406.9| Zebrafish DNA sequence from clone DKEY-187A3 in linkage group 13, complete sequence Length = 149208 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 373 attttgacatttgaatatag 392 |||||||||||||||||||| Sbjct: 105852 attttgacatttgaatatag 105833
>emb|AJ720461.1| Gallus gallus mRNA for hypothetical protein, clone 18c10 Length = 2782 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 69 ttcacatactggtattttacaaca 92 ||||||||||||||| |||||||| Sbjct: 841 ttcacatactggtatcttacaaca 818
>emb|AL935035.6| Zebrafish DNA sequence from clone CH211-180B22 in linkage group 20 Contains the 5' end of the gene for a novel protein similar to vertebrate meningioma expressed antigen 6 (coiled-coil proline-rich) (MGEA6), the gene for a novel protein similar to vertebrate melanoma inhibitory activity 2 (MIA2), the gene for a novel protein similar to mouse and human TATA box binding protein (TBP)-associated factor RNA polymerase I A 48kDa (TAF1A), the 3' end of the gene for a novel protein similar to vertebrate dual specificity phosphatase 10 (DUSP10) and four CpG islands, complete sequence Length = 151114 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 actatttttatttatttatggaaa 161 |||||||||||| ||||||||||| Sbjct: 16610 actatttttattaatttatggaaa 16633
>gb|AC151829.4| Mus musculus BAC clone RP24-151C24 from chromosome y, complete sequence Length = 183351 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 90803 aactatttttatttatttat 90822
>emb|CR450827.5| Zebrafish DNA sequence from clone CH211-112G6 in linkage group 13, complete sequence Length = 174505 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 actatttttatttatttatggaaa 161 |||||||||||| ||||||||||| Sbjct: 82481 actatttttattaatttatggaaa 82458
>gb|AC010618.9| Homo sapiens chromosome 19 clone CTD-3131K8, complete sequence Length = 107226 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 31001 aactatttttatttatttat 30982
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 tccctactgtaaaccccagg 291 |||||||||||||||||||| Sbjct: 3877616 tccctactgtaaaccccagg 3877597
>emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in linkage group 13, complete sequence Length = 193538 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 373 attttgacatttgaatatag 392 |||||||||||||||||||| Sbjct: 143941 attttgacatttgaatatag 143960
>gb|AC113250.3| Drosophila melanogaster 3L BAC RP98-6P13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168299 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 133245 aactatttttatttatttat 133264
>gb|AC102953.5| Homo sapiens BAC clone RP11-1246C19 from 7, complete sequence Length = 148996 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 25348 aactatttttatttatttat 25329
>gb|AC144481.6| Medicago truncatula clone mth2-35e10, complete sequence Length = 127189 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 43925 aactatttttatttatttat 43944
>gb|AC084365.16| Homo sapiens 12 BAC RP11-632B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188629 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 atttttatttatttatggaa 160 |||||||||||||||||||| Sbjct: 177776 atttttatttatttatggaa 177795
>gb|AC073173.7| Homo sapiens chromosome 10 clone RP11-183D3, complete sequence Length = 114611 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 tatttttatttatttatggaaaag 163 |||||||| ||||||||||||||| Sbjct: 76583 tatttttagttatttatggaaaag 76560
>gb|AC073160.8| Homo sapiens chromosome 10 clone RP11-348G8, complete sequence Length = 189817 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 129 ctcccctcaactatttttatttatttat 156 |||||||| |||||||||||||||||| Sbjct: 114730 ctcccctctcctatttttatttatttat 114757
>ref|NM_002760.3| Homo sapiens protein kinase, Y-linked (PRKY), mRNA Length = 7216 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tcaactatttttatttattt 154 |||||||||||||||||||| Sbjct: 5342 tcaactatttttatttattt 5323
>gb|AC174806.2| Mus musculus BAC clone RP24-526I8 from chromosome y, complete sequence Length = 155247 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 21122 aactatttttatttatttat 21141
>dbj|AK136958.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430012G10 product:unclassifiable, full insert sequence Length = 2457 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 1433 aactatttttatttatttat 1452
>gb|AC090696.6| Homo sapiens chromosome 15, clone RP11-595N10, complete sequence Length = 187350 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 139364 aactatttttatttatttat 139383
>dbj|AK153898.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430003M17 product:aldo-keto reductase family 1, member C18, full insert sequence Length = 1197 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 tatttttatttatttatggaaaag 163 ||||||||||||||||| |||||| Sbjct: 1182 tatttttatttatttatagaaaag 1159
>gb|AC011669.10| Homo sapiens chromosome 11, clone RP11-145B21, complete sequence Length = 190023 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 tcaactatttttatttattt 154 |||||||||||||||||||| Sbjct: 82643 tcaactatttttatttattt 82662
>gb|AF220352.1|AF220352 Plasmodium falciparum 41-3 antigen gene, complete cds Length = 2137 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 tatttttatttatttatggaaaag 163 ||||||||||||||||| |||||| Sbjct: 1711 tatttttatttatttatagaaaag 1734
>gb|AC027465.7| Homo sapiens, clone RP11-115J23, complete sequence Length = 177784 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 tcaactatttttatttattt 154 |||||||||||||||||||| Sbjct: 86035 tcaactatttttatttattt 86054
>gb|AC010837.2| Homo sapiens chromosome 18, clone RP11-307E5, complete sequence Length = 210074 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 5137 aactatttttatttatttat 5156
>gb|AC182446.2| Mus musculus BAC clone RP24-518O14 from chromosome y, complete sequence Length = 155144 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 142618 aactatttttatttatttat 142599 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 31498 aactatttttatttatttat 31517
>gb|AC182554.2| Mus musculus BAC clone RP24-307C8 from chromosome y, complete sequence Length = 138532 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 36510 aactatttttatttatttat 36529
>gb|AC154118.6| Mus musculus chromosome 19, clone RP24-340C10, complete sequence Length = 141422 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 96918 aactatttttatttatttat 96937
>gb|AC092228.1|AC092228 Drosophila melanogaster, chromosome 2L, region 35X-35X, BAC clone BACR21J17, complete sequence Length = 174974 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 134350 aactatttttatttatttat 134369
>emb|BX470221.9| Zebrafish DNA sequence from clone CH211-86K6 in linkage group 1, complete sequence Length = 155895 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 tattttacaacaatacagta 100 |||||||||||||||||||| Sbjct: 153474 tattttacaacaatacagta 153455
>gb|AC120057.9| Homo sapiens chromosome 17, clone CTD-2545G14, complete sequence Length = 198821 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 tttatttatggaaaagcaag 167 |||||||||||||||||||| Sbjct: 109582 tttatttatggaaaagcaag 109601
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ccctcaactatttttattta 151 |||||||||||||||||||| Sbjct: 5528232 ccctcaactatttttattta 5528213
>gb|AC020911.9| Homo sapiens chromosome 19 clone CTD-2562J15, complete sequence Length = 196512 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 46281 aactatttttatttatttat 46262
>gb|AC058784.17|AC058784 Homo sapiens chromosome 13 clone RP11-288O16, complete sequence Length = 163781 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 122898 aactatttttatttatttat 122879
>gb|AC097525.3| Homo sapiens BAC clone RP11-627E8 from 2, complete sequence Length = 55514 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 20385 aactatttttatttatttat 20404
>gb|AC154462.2| Mus musculus BAC clone RP24-165F12 from chromosome 14, complete sequence Length = 164631 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 atatccaagtagcaaatttgttca 72 |||| ||||||||||||||||||| Sbjct: 96743 atatgcaagtagcaaatttgttca 96766
>gb|AC133084.4| Mus musculus BAC clone RP24-358F13 from chromosome 5, complete sequence Length = 177485 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 cccagggcccaaaggaaaaagcca 309 ||||||||||| |||||||||||| Sbjct: 24021 cccagggcccacaggaaaaagcca 23998
>gb|AC007284.4|AC007284 Homo sapiens BAC clone RP11-558K21 from Y, complete sequence Length = 171449 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tcaactatttttatttattt 154 |||||||||||||||||||| Sbjct: 73771 tcaactatttttatttattt 73752
>gb|AE014845.1| Plasmodium falciparum 3D7 chromosome 12, section 2 of 9 of the complete sequence Length = 250531 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 tatttttatttatttatggaaaag 163 ||||||||||||||||| |||||| Sbjct: 100780 tatttttatttatttatagaaaag 100757
>gb|AC173708.4| Mus musculus BAC clone RP24-140O8 from chromosome y, complete sequence Length = 165998 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 158909 aactatttttatttatttat 158928
>gb|AC174381.2| Mus musculus BAC clone RP24-206F6 from chromosome y, complete sequence Length = 172601 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 117017 aactatttttatttatttat 116998
>gb|AC006434.5|AC006434 Genomic sequence for Arabidopsis thaliana BAC F10A5, complete sequence Length = 129547 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ggttgagacaagaaggatga 463 |||||||||||||||||||| Sbjct: 15825 ggttgagacaagaaggatga 15806
>gb|AC142166.6| Mus musculus BAC clone RP24-455G9 from chromosome y, complete sequence Length = 169731 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 81666 aactatttttatttatttat 81685
>gb|AC148320.3| Mus musculus BAC clone RP24-555B2 from chromosome y, complete sequence Length = 192936 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 171177 aactatttttatttatttat 171196
>gb|AC140452.4| Mus musculus BAC clone RP24-120F24 from chromosome unknown, complete sequence Length = 199125 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 20947 aactatttttatttatttat 20928
>gb|AC121540.14| Mus musculus chromosome 3, clone RP23-48L9, complete sequence Length = 224634 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 147826 aactatttttatttatttat 147845
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ccctcaactatttttattta 151 |||||||||||||||||||| Sbjct: 41317 ccctcaactatttttattta 41298
>dbj|BS000201.1| Pan troglodytes chromosome 22 clone:PTB-047A24, map 22, complete sequences Length = 165662 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 agcatgactgttgaaaactt 329 |||||||||||||||||||| Sbjct: 36629 agcatgactgttgaaaactt 36648
>emb|AL593846.15| Mouse DNA sequence from clone RP23-171H16 on chromosome 11, complete sequence Length = 213263 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 tatttttatttatttatgga 159 |||||||||||||||||||| Sbjct: 134091 tatttttatttatttatgga 134072
>gb|AC002462.1|AC002462 Human BAC clone CTA-210I4, complete sequence Length = 100258 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 atttttatttatttatggaa 160 |||||||||||||||||||| Sbjct: 80828 atttttatttatttatggaa 80847
>gb|AC004841.2|AC004841 Homo sapiens PAC clone RP4-607J23 from 7q21.2-q31.1, complete sequence Length = 132072 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 95810 aactatttttatttatttat 95791
>gb|AC004982.1|AC004982 Homo sapiens PAC clone RP5-1159O4 from 7p21-p22, complete sequence Length = 130027 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 ggttgagacaagaaggatga 463 |||||||||||||||||||| Sbjct: 79676 ggttgagacaagaaggatga 79657
>gb|AC005095.2|AC005095 Homo sapiens BAC clone CTA-332P12 from 7q22-q31.1, complete sequence Length = 119937 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 48467 aactatttttatttatttat 48486
>emb|BX927116.18| Zebrafish DNA sequence from clone DKEY-261D11 in linkage group 22, complete sequence Length = 155808 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tcaactatttttatttattt 154 |||||||||||||||||||| Sbjct: 65455 tcaactatttttatttattt 65436
>emb|AL772198.14| Zebrafish DNA sequence from clone CH211-194D6 in linkage group 9, complete sequence Length = 211682 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 138 actatttttatttatttatggaaa 161 |||||||||||| ||||||||||| Sbjct: 3170 actatttttattaatttatggaaa 3193
>emb|CT030725.15| Mouse DNA sequence from clone RP24-281O2 on chromosome 16, complete sequence Length = 115213 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 87411 aactatttttatttatttat 87430
>gb|AE003644.4| Drosophila melanogaster chromosome 2L, section 53 of 83 of the complete sequence Length = 263306 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 26190 aactatttttatttatttat 26209
>emb|CR760252.2| Xenopus tropicalis finished cDNA, clone TNeu123j05 Length = 1498 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 tttatttatggaaaagcaag 167 |||||||||||||||||||| Sbjct: 153 tttatttatggaaaagcaag 172
>gb|AE003529.3| Drosophila melanogaster chromosome 3L, section 56 of 83 of the complete sequence Length = 252201 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 127083 aactatttttatttatttat 127102
>emb|Y13934.1|HSY13934 Homo sapiens PRKY exon 9 Length = 6100 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tcaactatttttatttattt 154 |||||||||||||||||||| Sbjct: 4215 tcaactatttttatttattt 4196
>dbj|AP006201.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-79K22, complete sequence Length = 172172 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 167395 aactatttttatttatttat 167376
>dbj|AP006200.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-688E1, complete sequence Length = 159019 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 63821 aactatttttatttatttat 63802
>gb|AC163641.5| Mus musculus BAC clone RP24-445G19 from chromosome 13, complete sequence Length = 190073 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 144 tttatttatttatggaaaag 163 |||||||||||||||||||| Sbjct: 73914 tttatttatttatggaaaag 73895
>gb|AC147167.3| Mus musculus BAC clone RP24-291I16 from Y, complete sequence Length = 144051 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 133291 aactatttttatttatttat 133310
>gb|AC134825.5| Mus musculus BAC clone RP24-456L17 from 9, complete sequence Length = 173663 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 142209 aactatttttatttatttat 142190
>gb|AC148984.3| Mus musculus BAC clone RP24-550J1 from Y, complete sequence Length = 174935 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 108808 aactatttttatttatttat 108827
>ref|NM_134066.1| Mus musculus aldo-keto reductase family 1, member C18 (Akr1c18), mRNA Length = 1193 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 tatttttatttatttatggaaaag 163 ||||||||||||||||| |||||| Sbjct: 1164 tatttttatttatttatagaaaag 1141
>gb|AC124577.5| Mus musculus BAC clone RP23-162P10 from 9, complete sequence Length = 218248 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 agggcccaaaggaaaaagcc 308 |||||||||||||||||||| Sbjct: 113161 agggcccaaaggaaaaagcc 113180
>gb|AC123611.7| Mus musculus chromosome 15, clone RP23-345H23, complete sequence Length = 209792 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 36310 aactatttttatttatttat 36329
>emb|X70411.1|HSTRANXYB H.sapiens sequence involved in X;Y translocation Length = 2594 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 tcaactatttttatttattt 154 |||||||||||||||||||| Sbjct: 2262 tcaactatttttatttattt 2243
>gb|M59961.1|PFABSA P.falciparum blood stage antigen (41-3) gene, complete cds Length = 3844 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 tatttttatttatttatggaaaag 163 ||||||||||||||||| |||||| Sbjct: 2616 tatttttatttatttatagaaaag 2639
>dbj|AB059565.1| Mus musculus 20alpha-HSD mRNA for 20alpha-hydroxysteroid dehydrogenase, complete cds Length = 1193 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 tatttttatttatttatggaaaag 163 ||||||||||||||||| |||||| Sbjct: 1164 tatttttatttatttatagaaaag 1141
>dbj|AP002528.1| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 1/4 Length = 300000 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 120298 aactatttttatttatttat 120279
>dbj|AB042234.1| Homo sapiens genomic DNA, chromosome 6q21, clone:353I20, complete sequence Length = 143320 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 120298 aactatttttatttatttat 120279
>dbj|AB041511.1| Homo sapiens genomic DNA, chromosome 6q21, clone:57I12, complete sequence Length = 157950 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 aactatttttatttatttat 156 |||||||||||||||||||| Sbjct: 22708 aactatttttatttatttat 22689 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,721,191 Number of Sequences: 3902068 Number of extensions: 7721191 Number of successful extensions: 296504 Number of sequences better than 10.0: 176 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 295340 Number of HSP's gapped (non-prelim): 1164 length of query: 517 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 494 effective length of database: 17,143,297,704 effective search space: 8468789065776 effective search space used: 8468789065776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
