ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.013
2dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.013
3gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.013
4dbj|AK119506.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.013
5dbj|AK061138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.013
6emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on ch... 46 0.051
7gb|AC007364.3| Homo sapiens BAC clone RP11-329H24 from 2, comple... 44 0.20
8gb|AC090676.11| Homo sapiens 12 BAC RP11-654D6 (Roswell Park Can... 44 0.20
9gb|AC154486.2| Mus musculus BAC clone RP24-118H13 from chromosom... 42 0.80
10gb|AC125309.4| Mus musculus BAC clone RP24-488N15 from chromosom... 42 0.80
11emb|AL034419.22|HS1108D11 Human DNA sequence from clone RP5-1108... 42 0.80
12emb|AL606480.11| Mouse DNA sequence from clone RP23-112C19 on ch... 42 0.80
13dbj|AK051280.1| Mus musculus 12 days embryo spinal ganglion cDNA... 42 0.80
14dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.80
15dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.80
16gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster... 42 0.80
17emb|AL670223.7| Mouse DNA sequence from clone RP23-29O24 on chro... 42 0.80
18gb|AC005739.1| Homo sapiens chromosome 5, PAC clone 64m18 (LBNL ... 40 3.2
19ref|XM_460888.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 3.2
20gb|AY438027.1| Lycopersicon esculentum bacterial spot disease re... 40 3.2
21emb|AL161900.8| Human DNA sequence from clone RP11-479J22 on chr... 40 3.2
22emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS... 40 3.2
23emb|AL772195.4| Mouse DNA sequence from clone RP23-218C5 on chro... 40 3.2
24gb|AC164090.3| Mus musculus BAC clone RP23-403F3 from chromosome... 40 3.2
25gb|AC163647.3| Mus musculus BAC clone RP23-214L4 from chromosome... 40 3.2
26gb|AC010328.4| Homo sapiens chromosome 19 clone CITB-E1_2620I22,... 40 3.2
27ref|NM_131058.1| Danio rerio T-box gene 16 (tbx16), mRNA 40 3.2
28gb|AF297867.2| Xenopus laevis Claspin mRNA, complete cds 40 3.2
29gb|AC108118.2| Homo sapiens chromosome 5 clone RP11-44C2, comple... 40 3.2
30gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complet... 40 3.2
31gb|AF077225.1| Danio rerio spadetail (spt) mRNA, complete cds 40 3.2
32gb|AC092051.2| Homo sapiens chromosome 3 clone RP11-286G5, compl... 40 3.2
33dbj|AK046992.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 3.2
34gb|AC158558.6| Mus musculus chromosome 5, clone RP23-34P11, comp... 40 3.2
35gb|BC097927.1| Xenopus laevis cDNA clone MGC:115738 IMAGE:686887... 40 3.2
36gb|AC104596.4| Homo sapiens BAC clone RP11-54P19 from 4, complet... 40 3.2
37gb|AC097110.1| Homo sapiens BAC clone RP11-51P8 from 4, complete... 40 3.2
38gb|AC138136.2| Homo sapiens chromosome 8, clone RP11-158D1, comp... 40 3.2
39gb|AC124802.11| Homo sapiens chromosome 17, clone RP11-278N14, c... 40 3.2
40gb|AC090453.4| Homo sapiens chromosome 8, clone RP11-380B11, com... 40 3.2
41gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome 40 3.2
42emb|BX537336.19| Zebrafish DNA sequence from clone CH211-172B12 ... 40 3.2
43emb|BX510353.10| Zebrafish DNA sequence from clone DKEY-201E17 i... 40 3.2
44emb|BX323453.7| Zebrafish DNA sequence from clone CH211-212G2 in... 40 3.2
45emb|BX957256.6| Zebrafish DNA sequence from clone DKEY-23N7 in l... 40 3.2
46gb|AC154275.2| Mus musculus BAC clone RP24-299G8 from chromosome... 40 3.2
47dbj|AP006307.1| Homo sapiens genomic DNA, chromosome 8 clone:RP1... 40 3.2
48gb|BC095003.1| Danio rerio T-box gene 16, mRNA (cDNA clone MGC:1... 40 3.2
49emb|AL662895.7| Mouse DNA sequence from clone RP23-340L19 on chr... 40 3.2
50emb|AL358892.13| Mouse DNA sequence from clone RP21-417G6 on chr... 40 3.2
51dbj|AP000074.1| Homo sapiens genomic DNA, chromosome 8p11.2, sen... 40 3.2 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                           
Query: 174     tggcagaagctggatttccactgcgactgccgcgactccacccacgccaagaatctgtac 233
               ||||||| ||| |||||||| || || || | || ||||| ||| |||||||||||||| 
Sbjct: 8078160 tggcagaggcttgatttccattgagattgtctcgtctccaaccatgccaagaatctgtag 8078219

                       
Query: 234     accttgcc 241
               ||||||||
Sbjct: 8078220 accttgcc 8078227
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                           
Query: 174     tggcagaagctggatttccactgcgactgccgcgactccacccacgccaagaatctgtac 233
               ||||||| ||| |||||||| || || || | || ||||| ||| |||||||||||||| 
Sbjct: 8075995 tggcagaggcttgatttccattgagattgtctcgtctccaaccatgccaagaatctgtag 8076054

                       
Query: 234     accttgcc 241
               ||||||||
Sbjct: 8076055 accttgcc 8076062
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>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBa0019J12, complete sequence
          Length = 195583

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                        
Query: 174  tggcagaagctggatttccactgcgactgccgcgactccacccacgccaagaatctgtac 233
            ||||||| ||| |||||||| || || || | || ||||| ||| |||||||||||||| 
Sbjct: 9590 tggcagaggcttgatttccattgagattgtctcgtctccaaccatgccaagaatctgtag 9649

                    
Query: 234  accttgcc 241
            ||||||||
Sbjct: 9650 accttgcc 9657
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>dbj|AK119506.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-F05, full
            insert sequence
          Length = 2042

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 174  tggcagaagctggatttccactgcgactgccgcgactccacccacgccaagaatctgtac 233
            ||||||| ||| |||||||| || || || | || ||||| ||| |||||||||||||| 
Sbjct: 1157 tggcagaggcttgatttccattgagattgtctcgtctccaaccatgccaagaatctgtag 1098

                    
Query: 234  accttgcc 241
            ||||||||
Sbjct: 1097 accttgcc 1090
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>dbj|AK061138.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-B07, full
            insert sequence
          Length = 1205

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                        
Query: 174  tggcagaagctggatttccactgcgactgccgcgactccacccacgccaagaatctgtac 233
            ||||||| ||| |||||||| || || || | || ||||| ||| |||||||||||||| 
Sbjct: 1033 tggcagaggcttgatttccattgagattgtctcgtctccaaccatgccaagaatctgtag 974

                    
Query: 234  accttgcc 241
            ||||||||
Sbjct: 973  accttgcc 966
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>emb|AL162419.34| Human DNA sequence from clone RP11-358M14 on chromosome 9 Contains the 5'
              end of a variant of a novel gene (FLJ90578) and a CpG
              island, complete sequence
          Length = 174535

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 216    cacgccaagaatctgtacacctt 238
              |||||||||||||||||||||||
Sbjct: 141326 cacgccaagaatctgtacacctt 141304
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>gb|AC007364.3| Homo sapiens BAC clone RP11-329H24 from 2, complete sequence
          Length = 200908

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 126   ttttctctacattcattgagca 147
             ||||||||||||||||||||||
Sbjct: 15895 ttttctctacattcattgagca 15874
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>gb|AC090676.11| Homo sapiens 12 BAC RP11-654D6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 139802

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 12     gaatttttgcagaattctttccattt 37
              ||||||| ||||||||||||||||||
Sbjct: 117164 gaattttagcagaattctttccattt 117189
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>gb|AC154486.2| Mus musculus BAC clone RP24-118H13 from chromosome 17, complete sequence
          Length = 197387

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 25     attctttccattttgtgcatt 45
              |||||||||||||||||||||
Sbjct: 112067 attctttccattttgtgcatt 112087
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>gb|AC125309.4| Mus musculus BAC clone RP24-488N15 from chromosome 17, complete
            sequence
          Length = 150271

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 25   attctttccattttgtgcatt 45
            |||||||||||||||||||||
Sbjct: 1972 attctttccattttgtgcatt 1992
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>emb|AL034419.22|HS1108D11 Human DNA sequence from clone RP5-1108D11 on chromosome 20q12-13.11
             Contains the 3' end of the JPH2 gene for junctophilin 2
             (JP2, JP-2), the 3' end of the C20orf100 gene for a novel
             HMG (high mobility group) box protein similar to KIAA0737,
             KIAA0808 and TNRC9 (CAGF9) and two CpG islands, complete
             sequence
          Length = 152209

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    tgcagaattctttccattttg 39
             |||||||||||||||||||||
Sbjct: 33845 tgcagaattctttccattttg 33825
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>emb|AL606480.11| Mouse DNA sequence from clone RP23-112C19 on chromosome 11 Contains the
              3' end of the Col1a1 gene for procollagen type I alpha 1,
              the Sgca gene for alpha sarcoglycan (dystrophin-associated
              glycoprotein), the Hils1 gene for histone H1-like protein
              in spermatids 1, the Ppp1r9b gene for protein phosphatase 1
              regulatory subunit 9B, a novel gene (A930041A10Rik,
              B930032I08Rik, C530046K03Rik), the Pdk2 gene for pyruvate
              dehydrogenase kinase isoenzyme 2, a novel gene, the Itga3
              gene for integrin alpha 3, the Dlx3 gene for distal-less
              homeobox 3 and three CpG islands, complete sequence
          Length = 186276

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 89     ggatggaggaggagggagttt 109
              |||||||||||||||||||||
Sbjct: 155015 ggatggaggaggagggagttt 155035
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>dbj|AK051280.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130028K12
           product:unclassifiable, full insert sequence
          Length = 1955

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 25  attctttccattttgtgcatt 45
           |||||||||||||||||||||
Sbjct: 473 attctttccattttgtgcatt 493
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 35      ttttgtgcattgtaaatttgt 55
               |||||||||||||||||||||
Sbjct: 7944466 ttttgtgcattgtaaatttgt 7944446
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>dbj|AP003196.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1008C01
          Length = 144141

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    ttttgtgcattgtaaatttgt 55
             |||||||||||||||||||||
Sbjct: 50778 ttttgtgcattgtaaatttgt 50758
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>gb|AE017196.1| Wolbachia endosymbiont of Drosophila melanogaster, complete genome
          Length = 1267782

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 114     ctctttcttggtttttctctacatt 138
               ||||||||| |||||||||||||||
Sbjct: 1076519 ctctttcttcgtttttctctacatt 1076543
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>emb|AL670223.7| Mouse DNA sequence from clone RP23-29O24 on chromosome 4, complete
              sequence
          Length = 184644

 Score = 42.1 bits (21), Expect = 0.80
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 115    tctttcttggtttttctctac 135
              |||||||||||||||||||||
Sbjct: 154185 tctttcttggtttttctctac 154205
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>gb|AC005739.1| Homo sapiens chromosome 5, PAC clone 64m18 (LBNL H140), complete
             sequence
          Length = 91894

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    atggatggaggaggagggag 106
             ||||||||||||||||||||
Sbjct: 61936 atggatggaggaggagggag 61955
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>ref|XM_460888.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F13101g)
            partial mRNA
          Length = 1281

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  ttctctttcttggtttttct 131
            ||||||||||||||||||||
Sbjct: 1270 ttctctttcttggtttttct 1251
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>gb|AY438027.1| Lycopersicon esculentum bacterial spot disease resistance protein 4
            (Bs4) gene, Bs4-MM allele, complete cds
          Length = 4524

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 33   cattttgtgcattgtaaatttgta 56
            |||||||| |||||||||||||||
Sbjct: 4429 cattttgtacattgtaaatttgta 4452
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>emb|AL161900.8| Human DNA sequence from clone RP11-479J22 on chromosome 13, complete
             sequence
          Length = 31248

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    cagaattctttccattttgt 40
             ||||||||||||||||||||
Sbjct: 24747 cagaattctttccattttgt 24728
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>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
               hansenii
          Length = 2336804

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     ttctctttcttggtttttct 131
               ||||||||||||||||||||
Sbjct: 1045615 ttctctttcttggtttttct 1045634
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>emb|AL772195.4| Mouse DNA sequence from clone RP23-218C5 on chromosome 11 Contains the
             5' end of the Ugp2 gene for  UDP-glucose pyrophosphorylase
             2, two novel genes, a cytoplasmic dynein light chain 1
             (Dnclc1) pseudogene, a RAB5A member RAS oncogene family
             (Rab5a) pseudogene, a novel pseudogene and a CpG island,
             complete sequence
          Length = 173182

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 84    aaaatggatggaggaggagggagt 107
             ||||||| ||||||||||||||||
Sbjct: 21596 aaaatggttggaggaggagggagt 21619
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>gb|AC164090.3| Mus musculus BAC clone RP23-403F3 from chromosome 6, complete sequence
          Length = 189441

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    gggagtttgtttctctttct 121
              ||||||||||||||||||||
Sbjct: 125908 gggagtttgtttctctttct 125889
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>gb|AC163647.3| Mus musculus BAC clone RP23-214L4 from chromosome 6, complete sequence
          Length = 197408

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   gggagtttgtttctctttct 121
             ||||||||||||||||||||
Sbjct: 16157 gggagtttgtttctctttct 16138
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>gb|AC010328.4| Homo sapiens chromosome 19 clone CITB-E1_2620I22, complete sequence
          Length = 196686

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   tttctctttcttggtttttc 130
             ||||||||||||||||||||
Sbjct: 43552 tttctctttcttggtttttc 43533
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>ref|NM_131058.1| Danio rerio T-box gene 16 (tbx16), mRNA
          Length = 2561

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  atggatggaggaggagggag 106
           ||||||||||||||||||||
Sbjct: 222 atggatggaggaggagggag 203
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>gb|AF297867.2| Xenopus laevis Claspin mRNA, complete cds
          Length = 4754

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 tctttcttggtttttctcta 134
           ||||||||||||||||||||
Sbjct: 389 tctttcttggtttttctcta 370
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>gb|AC108118.2| Homo sapiens chromosome 5 clone RP11-44C2, complete sequence
          Length = 86421

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    atggatggaggaggagggag 106
             ||||||||||||||||||||
Sbjct: 70978 atggatggaggaggagggag 70959
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>gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complete sequence
          Length = 195930

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    tctttcttggtttttctcta 134
              ||||||||||||||||||||
Sbjct: 161117 tctttcttggtttttctcta 161098
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>gb|AF077225.1| Danio rerio spadetail (spt) mRNA, complete cds
          Length = 2561

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  atggatggaggaggagggag 106
           ||||||||||||||||||||
Sbjct: 222 atggatggaggaggagggag 203
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>gb|AC092051.2| Homo sapiens chromosome 3 clone RP11-286G5, complete sequence
          Length = 183591

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tgcagaattctttccatttt 38
             ||||||||||||||||||||
Sbjct: 52863 tgcagaattctttccatttt 52844
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>dbj|AK046992.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:B930009O19
            product:unclassifiable, full insert sequence
          Length = 3044

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 22   agaattctttccattttgtgcattgtaaattt 53
            ||||||||  ||||||||||| ||||||||||
Sbjct: 1497 agaattctcaccattttgtgctttgtaaattt 1528
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>gb|AC158558.6| Mus musculus chromosome 5, clone RP23-34P11, complete sequence
          Length = 171035

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 22    agaattctttccattttgtgcattgtaaattt 53
             ||||||||  ||||||||||| ||||||||||
Sbjct: 99117 agaattctcaccattttgtgctttgtaaattt 99148
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>gb|BC097927.1| Xenopus laevis cDNA clone MGC:115738 IMAGE:6868875, complete cds
          Length = 1412

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 tctttcttggtttttctcta 134
           ||||||||||||||||||||
Sbjct: 413 tctttcttggtttttctcta 394
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>gb|AC104596.4| Homo sapiens BAC clone RP11-54P19 from 4, complete sequence
          Length = 168591

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 111    tttctctttcttggtttttctcta 134
              ||||||||||||| ||||||||||
Sbjct: 111524 tttctctttcttgatttttctcta 111547
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>gb|AC097110.1| Homo sapiens BAC clone RP11-51P8 from 4, complete sequence
          Length = 153480

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   tctttcttggtttttctcta 134
             ||||||||||||||||||||
Sbjct: 19097 tctttcttggtttttctcta 19078
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>gb|AC138136.2| Homo sapiens chromosome 8, clone RP11-158D1, complete sequence
          Length = 82309

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 105   agtttgtttctctttcttggtttttctc 132
             ||||||||||| || |||||||||||||
Sbjct: 57225 agtttgtttctgttacttggtttttctc 57198
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>gb|AC124802.11| Homo sapiens chromosome 17, clone RP11-278N14, complete sequence
          Length = 62029

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    tggatggaggaggagggagt 107
             ||||||||||||||||||||
Sbjct: 38011 tggatggaggaggagggagt 37992
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>gb|AC090453.4| Homo sapiens chromosome 8, clone RP11-380B11, complete sequence
          Length = 166452

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 105    agtttgtttctctttcttggtttttctc 132
              ||||||||||| || |||||||||||||
Sbjct: 138358 agtttgtttctgttacttggtttttctc 138385
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>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 70      caaaggtgaactaaaaaatg 89
               ||||||||||||||||||||
Sbjct: 3404650 caaaggtgaactaaaaaatg 3404631
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>emb|BX537336.19| Zebrafish DNA sequence from clone CH211-172B12 in linkage group 4,
             complete sequence
          Length = 130821

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 104   gagtttgtttctctttcttggtttttct 131
             |||||||||||| |||||| ||||||||
Sbjct: 68773 gagtttgtttctttttctttgtttttct 68800
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>emb|BX510353.10| Zebrafish DNA sequence from clone DKEY-201E17 in linkage group 4,
             complete sequence
          Length = 77999

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 104   gagtttgtttctctttcttggtttttct 131
             |||||||||||| |||||| ||||||||
Sbjct: 62908 gagtttgtttctttttctttgtttttct 62881
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>emb|BX323453.7| Zebrafish DNA sequence from clone CH211-212G2 in linkage group 22,
             complete sequence
          Length = 212160

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 108   ttgtttctctttcttggtttttct 131
             |||||| |||||||||||||||||
Sbjct: 27626 ttgtttttctttcttggtttttct 27603
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>emb|BX957256.6| Zebrafish DNA sequence from clone DKEY-23N7 in linkage group 7, complete
              sequence
          Length = 227909

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 128    ttctctacattcattgagca 147
              ||||||||||||||||||||
Sbjct: 130009 ttctctacattcattgagca 130028
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>gb|AC154275.2| Mus musculus BAC clone RP24-299G8 from chromosome 16, complete sequence
          Length = 183487

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     attttgtgcattgtaaattt 53
              ||||||||||||||||||||
Sbjct: 117345 attttgtgcattgtaaattt 117364
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>dbj|AP006307.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-673J3, complete
             sequence
          Length = 143669

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 105   agtttgtttctctttcttggtttttctc 132
             ||||||||||| || |||||||||||||
Sbjct: 92437 agtttgtttctgttacttggtttttctc 92410
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>gb|BC095003.1| Danio rerio T-box gene 16, mRNA (cDNA clone MGC:109817
           IMAGE:7226739), complete cds
          Length = 1890

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 87  atggatggaggaggagggag 106
           ||||||||||||||||||||
Sbjct: 238 atggatggaggaggagggag 219
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>emb|AL662895.7| Mouse DNA sequence from clone RP23-340L19 on chromosome 11, complete
            sequence
          Length = 214811

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   tggatggaggaggagggagt 107
            ||||||||||||||||||||
Sbjct: 2195 tggatggaggaggagggagt 2176
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>emb|AL358892.13| Mouse DNA sequence from clone RP21-417G6 on chromosome 5, complete
             sequence
          Length = 179132

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 22    agaattctttccattttgtgcattgtaaattt 53
             ||||||||  ||||||||||| ||||||||||
Sbjct: 70721 agaattctcaccattttgtgctttgtaaattt 70690
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>dbj|AP000074.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 10/19, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 105   agtttgtttctctttcttggtttttctc 132
             ||||||||||| || |||||||||||||
Sbjct: 59780 agtttgtttctgttacttggtttttctc 59807


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,017,321
Number of Sequences: 3902068
Number of extensions: 4017321
Number of successful extensions: 84261
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84054
Number of HSP's gapped (non-prelim): 207
length of query: 246
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 224
effective length of database: 17,147,199,772
effective search space: 3840972748928
effective search space used: 3840972748928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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