ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464571.1| Oryza sativa (japonica cultivar-group), mRNA 103 5e-19
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
3dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic D... 103 5e-19
4dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic D... 94 5e-16
5dbj|AK066593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
6dbj|AK066469.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 5e-16
7ref|XM_465318.1| Oryza sativa (japonica cultivar-group), mRNA 82 2e-12
8dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 80 7e-12
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
11gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 80 7e-12
12dbj|AP005917.2| Oryza sativa (japonica cultivar-group) genomic D... 78 3e-11
13ref|XM_464568.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
14ref|XM_470368.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
15gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare str... 50 0.006
16dbj|AK109711.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
17gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 44 0.40
18emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 44 0.40
19gb|AC124392.6| Mus musculus BAC clone RP24-441F24 from chromosom... 44 0.40
20gb|AC122346.4| Mus musculus BAC clone RP23-368L6 from 13, comple... 44 0.40
21gb|AC138355.17| Mus musculus chromosome 8, clone RP24-281G1, com... 42 1.6
22gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, com... 42 1.6
23gb|AC109162.12| Mus musculus chromosome 7, clone RP24-177G14, co... 42 1.6
24gb|BC083510.1| Homo sapiens inositol 1,3,4-triphosphate 5/6 kina... 42 1.6
25emb|AL834433.1|HSM805525 Homo sapiens mRNA; cDNA DKFZp762C186 (f... 42 1.6
26emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chrom... 42 1.6
27gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, co... 42 1.6
28dbj|AK143508.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN ... 42 1.6
29gb|AC073957.7| Homo sapiens BAC clone RP11-449P15 from 7, comple... 42 1.6
30ref|XM_941451.1| PREDICTED: Homo sapiens EH domain binding prote... 42 1.6
31ref|XM_170658.3| PREDICTED: Homo sapiens EH domain binding prote... 42 1.6
32gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
33dbj|AK024451.1| Homo sapiens mRNA for FLJ00043 protein, partial cds 42 1.6
34emb|AL683878.9| Mouse DNA sequence from clone RP23-201G13 on chr... 42 1.6
35dbj|AP001362.5| Homo sapiens genomic DNA, chromosome 11, clone:R... 42 1.6
36gb|AC144852.3| Mus musculus BAC clone RP24-341K21 from chromosom... 40 6.2
37ref|NM_177615.2| Mus musculus expressed sequence C78409 (C78409)... 40 6.2
38gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
39gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome... 40 6.2
40gb|AC127355.4| Mus musculus BAC clone RP23-96F6 from chromosome ... 40 6.2
41emb|AL356096.11| Human DNA sequence from clone RP11-366K1 on chr... 40 6.2
42emb|AL138914.9| Human DNA sequence from clone RP11-15L1 on chrom... 40 6.2
43gb|AC103018.7| Rattus norvegicus 1 CH230-196F22 (Children's Hosp... 40 6.2
44emb|AL645810.5| Zebrafish DNA sequence from clone BUSM1-37K09 Co... 40 6.2
45emb|AJ304858.2|ECO304858 Bacteriophage CP-1639 and chromosomal i... 40 6.2
46emb|BX323033.6| Zebrafish DNA sequence from clone DKEYP-63D11, c... 40 6.2
47gb|AC037479.9| Homo sapiens chromosome 15, clone RP11-616M17, co... 40 6.2
48gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome 40 6.2
49gb|AC022960.13| Homo sapiens chromosome 18, clone RP11-210K20, c... 40 6.2
50gb|AC015660.8| Homo sapiens chromosome 15, clone RP11-20G13, com... 40 6.2
51dbj|AK052641.1| Mus musculus 0 day neonate kidney cDNA, RIKEN fu... 40 6.2
52dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
53dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
54gb|AC069164.11|AC069164 Homo sapiens chromosome 13 clone RP11-33... 40 6.2
55gb|AC004968.1|AC004968 Homo sapiens PAC clone RP5-1119N5 from 14... 40 6.2
56gb|AC011445.6|AC011445 Homo sapiens chromosome 19 clone CTC-246B... 40 6.2
57ref|XM_579694.1| PREDICTED: Rattus norvegicus hypothetical gene ... 40 6.2
58dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.2
59dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
60dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 6.2
61dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
62emb|BX649262.4| Zebrafish DNA sequence from clone DKEY-174I8 in ... 40 6.2
63emb|BX546465.7| Mouse DNA sequence from clone RP23-167N13 on chr... 40 6.2
64gb|BC089587.1| Mus musculus cDNA clone MGC:107595 IMAGE:6757541,... 40 6.2
65gb|L09121.2|TTHCBA Thermus thermophilus hypothetical gliding pro... 40 6.2
66gb|AC152961.2| Mus musculus 6 BAC RP23-4H14 (Roswell Park Cancer... 40 6.2
67gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.2
68gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.2
69emb|AJ556162.1|LPH556162 Phage BP-4795 complete genome 40 6.2
70emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, c... 40 6.2
71gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2 
>ref|XM_464571.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1527

 Score =  103 bits (52), Expect = 5e-19
 Identities = 115/136 (84%)
 Strand = Plus / Minus

                                                                        
Query: 191  agctgcgtaagcctttcatacgaatcgcctcctttctccatggccctccgtgctttcgcg 250
            |||||||| || |||||||||||   ||| |||||||||||||| ||  | |||||| | 
Sbjct: 1448 agctgcgtcaggctttcatacgaggagccccctttctccatggctctgtgagctttctcc 1389

                                                                        
Query: 251  ccgtactccttggccttcctcctcctctcttcggcctcctccccaccctgcatgagctct 310
            ||||||||||| |||||||||||||||||  |||||||||| || || | |||||||| |
Sbjct: 1388 ccgtactcctttgccttcctcctcctctcgccggcctcctcgccgccgtccatgagcttt 1329

                            
Query: 311  gacaccgcgcgcgcga 326
            |||||||| |||||||
Sbjct: 1328 gacaccgcccgcgcga 1313
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  103 bits (52), Expect = 5e-19
 Identities = 115/136 (84%)
 Strand = Plus / Plus

                                                                           
Query: 191     agctgcgtaagcctttcatacgaatcgcctcctttctccatggccctccgtgctttcgcg 250
               |||||||| || |||||||||||   ||| |||||||||||||| ||  | |||||| | 
Sbjct: 6016508 agctgcgtcaggctttcatacgaggagccccctttctccatggctctgtgagctttctcc 6016567

                                                                           
Query: 251     ccgtactccttggccttcctcctcctctcttcggcctcctccccaccctgcatgagctct 310
               ||||||||||| |||||||||||||||||  |||||||||| || || | |||||||| |
Sbjct: 6016568 ccgtactcctttgccttcctcctcctctcgccggcctcctcgccgccgtccatgagcttt 6016627

                               
Query: 311     gacaccgcgcgcgcga 326
               |||||||| |||||||
Sbjct: 6016628 gacaccgcccgcgcga 6016643



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                           
Query: 217     gcctcctttctccatggccctccgtgctttcgcgccgtactccttggccttcctcctcct 276
               |||||||||| |||||||||| || |||| | | ||||||||||||||||||||||||||
Sbjct: 5966209 gcctcctttcgccatggcccttcgagcttgctcaccgtactccttggccttcctcctcct 5966268

                              
Query: 277     ctcttcggcctcctc 291
               ||| |||||||||||
Sbjct: 5966269 ctcctcggcctcctc 5966283



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                           
Query: 217     gcctcctttctccatggccctccgtgctttcgcgccgtactccttggccttcctcctcct 276
               |||||||||| |||||||||| || |||| | | ||||||||||||||||||||||||||
Sbjct: 5955823 gcctcctttcgccatggcccttcgagcttgctcaccgtactccttggccttcctcctcct 5955882

                              
Query: 277     ctcttcggcctcctc 291
               ||| |||||||||||
Sbjct: 5955883 ctcctcggcctcctc 5955897



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                            
Query: 191      agctgcgtaagcctttcatacgaatcgcctcctttctccatggccctccgtgctttcgcg 250
                |||||||| || |||||||||||   |||||||||||||||||| || |  |||||| | 
Sbjct: 13406121 agctgcgtcaggctttcatacgaggagcctcctttctccatggctctgcaagctttctcc 13406062

                                             
Query: 251      ccgtactccttggccttcctcctcctctc 279
                ||||||||||| |||||||||||||||||
Sbjct: 13406061 ccgtactccttcgccttcctcctcctctc 13406033



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                           
Query: 400     gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcggcaaagtgtgg 459
               |||||| |||||||||||||| || ||| |||||||||||||||||||||| ||||||||
Sbjct: 5966392 gccgacgccgagcacgtccacggcgagccgctcgttcaggaactggtcggcgaagtgtgg 5966451



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                           
Query: 400     gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcggcaaagtgtgg 459
               |||||| |||||||||||||| || ||| |||||||||||||||||||||| ||||||||
Sbjct: 5956006 gccgacgccgagcacgtccacggcgagccgctcgttcaggaactggtcggcgaagtgtgg 5956065



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                           
Query: 218     cctcctttctccatggccctccgtgctttcgcgccgtactccttggccttcctcctcctc 277
               ||||||||||||||||| || || |||||| | ||||||||||| |||||||||||||||
Sbjct: 5977574 cctcctttctccatggctctgcgagctttctccccgtactccttcgccttcctcctcctc 5977633

                      
Query: 278     tcttcgg 284
               || ||||
Sbjct: 5977634 tcgtcgg 5977640



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                                 
Query: 400     gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
               |||||| ||||||||||| || || ||| |||||||||||||||||||||
Sbjct: 5977756 gccgacgccgagcacgtcgacggcgagccgctcgttcaggaactggtcgg 5977805



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                            
Query: 400      gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcggcaaagtgtgg 459
                |||||| ||||||||||| || || | | |||||||||||||||||||||  ||||||||
Sbjct: 13405939 gccgacgccgagcacgtcgacggcgaaccgctcgttcaggaactggtcggagaagtgtgg 13405880



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                 
Query: 400     gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
               |||||| ||||||||||| || || ||| ||||||| |||||||||||||
Sbjct: 6002294 gccgacgccgagcacgtcgacggcgagccgctcgtttaggaactggtcgg 6002245
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>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1003_F05
          Length = 147472

 Score =  103 bits (52), Expect = 5e-19
 Identities = 115/136 (84%)
 Strand = Plus / Plus

                                                                         
Query: 191   agctgcgtaagcctttcatacgaatcgcctcctttctccatggccctccgtgctttcgcg 250
             |||||||| || |||||||||||   ||| |||||||||||||| ||  | |||||| | 
Sbjct: 37347 agctgcgtcaggctttcatacgaggagccccctttctccatggctctgtgagctttctcc 37406

                                                                         
Query: 251   ccgtactccttggccttcctcctcctctcttcggcctcctccccaccctgcatgagctct 310
             ||||||||||| |||||||||||||||||  |||||||||| || || | |||||||| |
Sbjct: 37407 ccgtactcctttgccttcctcctcctctcgccggcctcctcgccgccgtccatgagcttt 37466

                             
Query: 311   gacaccgcgcgcgcga 326
             |||||||| |||||||
Sbjct: 37467 gacaccgcccgcgcga 37482



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 400   gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
             |||||| ||||||||||| || || ||| ||||||| |||||||||||||
Sbjct: 23133 gccgacgccgagcacgtcgacggcgagccgctcgtttaggaactggtcgg 23084
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>dbj|AP005915.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0056C19
          Length = 147739

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                          
Query: 217    gcctcctttctccatggccctccgtgctttcgcgccgtactccttggccttcctcctcct 276
              |||||||||| |||||||||| || |||| | | ||||||||||||||||||||||||||
Sbjct: 144430 gcctcctttcgccatggcccttcgagcttgctcaccgtactccttggccttcctcctcct 144489

                             
Query: 277    ctcttcggcctcctc 291
              ||| |||||||||||
Sbjct: 144490 ctcctcggcctcctc 144504



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 68/75 (90%)
 Strand = Plus / Plus

                                                                          
Query: 217    gcctcctttctccatggccctccgtgctttcgcgccgtactccttggccttcctcctcct 276
              |||||||||| |||||||||| || |||| | | ||||||||||||||||||||||||||
Sbjct: 134044 gcctcctttcgccatggcccttcgagcttgctcaccgtactccttggccttcctcctcct 134103

                             
Query: 277    ctcttcggcctcctc 291
              ||| |||||||||||
Sbjct: 134104 ctcctcggcctcctc 134118



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                          
Query: 400    gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcggcaaagtgtgg 459
              |||||| |||||||||||||| || ||| |||||||||||||||||||||| ||||||||
Sbjct: 144613 gccgacgccgagcacgtccacggcgagccgctcgttcaggaactggtcggcgaagtgtgg 144672



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Plus

                                                                          
Query: 400    gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcggcaaagtgtgg 459
              |||||| |||||||||||||| || ||| |||||||||||||||||||||| ||||||||
Sbjct: 134227 gccgacgccgagcacgtccacggcgagccgctcgttcaggaactggtcggcgaagtgtgg 134286
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>dbj|AK066593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073P05, full
            insert sequence
          Length = 1795

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                        
Query: 217  gcctcctttctccatggccctccgtgctttcgcgccgtactccttggccttcctcctcct 276
            |||||||||| |||||||||| || |||| | | ||||||||||||||||||||||||||
Sbjct: 1437 gcctcctttcgccatggcccttcgagcttgctcaccgtactccttggccttcctcctcct 1378

                           
Query: 277  ctcttcggcctcctc 291
            ||| |||||||||||
Sbjct: 1377 ctcctcggcctcctc 1363



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                        
Query: 400  gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcggcaaagtgtgg 459
            |||||| |||||||||||||| || ||| |||||||||||||||||||||| ||||||||
Sbjct: 1254 gccgacgccgagcacgtccacggcgagccgctcgttcaggaactggtcggcgaagtgtgg 1195
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>dbj|AK066469.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067D15, full
            insert sequence
          Length = 1999

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 68/75 (90%)
 Strand = Plus / Minus

                                                                        
Query: 217  gcctcctttctccatggccctccgtgctttcgcgccgtactccttggccttcctcctcct 276
            |||||||||| |||||||||| || |||| | | ||||||||||||||||||||||||||
Sbjct: 1455 gcctcctttcgccatggcccttcgagcttgctcaccgtactccttggccttcctcctcct 1396

                           
Query: 277  ctcttcggcctcctc 291
            ||| |||||||||||
Sbjct: 1395 ctcctcggcctcctc 1381



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                        
Query: 400  gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcggcaaagtgtgg 459
            |||||| |||||||||||||| || ||| |||||||||||||||||||||| ||||||||
Sbjct: 1272 gccgacgccgagcacgtccacggcgagccgctcgttcaggaactggtcggcgaagtgtgg 1213
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>ref|XM_465318.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 486

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                       
Query: 191 agctgcgtaagcctttcatacgaatcgcctcctttctccatggccctccgtgctttcgcg 250
           |||||||| || |||||||||||   |||||||||||||||||| || |  |||||| | 
Sbjct: 437 agctgcgtcaggctttcatacgaggagcctcctttctccatggctctgcaagctttctcc 378

                                        
Query: 251 ccgtactccttggccttcctcctcctctc 279
           ||||||||||| |||||||||||||||||
Sbjct: 377 ccgtactccttcgccttcctcctcctctc 349



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 400 gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcggcaaagtgtgg 459
           |||||| ||||||||||| || || | | |||||||||||||||||||||  ||||||||
Sbjct: 255 gccgacgccgagcacgtcgacggcgaaccgctcgttcaggaactggtcggagaagtgtgg 196
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>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1521_G01
          Length = 144102

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Minus

                                                                          
Query: 191    agctgcgtaagcctttcatacgaatcgcctcctttctccatggccctccgtgctttcgcg 250
              |||||||| || |||||||||||   |||||||||||||||||| || |  |||||| | 
Sbjct: 131372 agctgcgtcaggctttcatacgaggagcctcctttctccatggctctgcaagctttctcc 131313

                                           
Query: 251    ccgtactccttggccttcctcctcctctc 279
              ||||||||||| |||||||||||||||||
Sbjct: 131312 ccgtactccttcgccttcctcctcctctc 131284



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                          
Query: 400    gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcggcaaagtgtgg 459
              |||||| ||||||||||| || || | | |||||||||||||||||||||  ||||||||
Sbjct: 131190 gccgacgccgagcacgtcgacggcgaaccgctcgttcaggaactggtcggagaagtgtgg 131131
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                            
Query: 191      agctgcgtaagcctttcatacgaatcgcctcctttctccatggccctccgtgctttcgcg 250
                |||||||| || |||||||||||   |||||||||||||||||| || || |||||| | 
Sbjct: 34987876 agctgcgtcaggctttcatacgaggagcctcctttctccatggctctgcgagctttctcc 34987817

                                        
Query: 251      ccgtactccttggccttcctcctc 274
                ||||||||||| ||||||||||||
Sbjct: 34987816 ccgtactccttcgccttcctcctc 34987793



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 400      gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
                |||||| ||||||||||| ||  | ||| |||||||||||||||||||||
Sbjct: 34987678 gccgacgccgagcacgtcgacgacgagccgctcgttcaggaactggtcgg 34987629



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 401      ccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
                |||| ||||||||| ||||| |||| || | ||||||||||||||||||
Sbjct: 13755425 ccgatcccgagcacctccaccgccatcttcgcgttcaggaactggtcgg 13755377



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 251     ccgtactccttggccttcctcctcctctc 279
               ||||||||||| |||||||| ||||||||
Sbjct: 8663842 ccgtactccttcgccttcctgctcctctc 8663870
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                            
Query: 191      agctgcgtaagcctttcatacgaatcgcctcctttctccatggccctccgtgctttcgcg 250
                |||||||| || |||||||||||   |||||||||||||||||| || || |||||| | 
Sbjct: 35077948 agctgcgtcaggctttcatacgaggagcctcctttctccatggctctgcgagctttctcc 35077889

                                        
Query: 251      ccgtactccttggccttcctcctc 274
                ||||||||||| ||||||||||||
Sbjct: 35077888 ccgtactccttcgccttcctcctc 35077865



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 400      gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
                |||||| ||||||||||| ||  | ||| |||||||||||||||||||||
Sbjct: 35077750 gccgacgccgagcacgtcgacgacgagccgctcgttcaggaactggtcgg 35077701



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                                 
Query: 401      ccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
                |||| ||||||||| ||||| |||| || | ||||||||||||||||||
Sbjct: 13750400 ccgatcccgagcacctccaccgccatcttcgcgttcaggaactggtcgg 13750352



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 251     ccgtactccttggccttcctcctcctctc 279
               ||||||||||| |||||||| ||||||||
Sbjct: 8661677 ccgtactccttcgccttcctgctcctctc 8661705
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>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
             sequence
          Length = 171376

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                         
Query: 191   agctgcgtaagcctttcatacgaatcgcctcctttctccatggccctccgtgctttcgcg 250
             |||||||| || |||||||||||   |||||||||||||||||| || || |||||| | 
Sbjct: 27604 agctgcgtcaggctttcatacgaggagcctcctttctccatggctctgcgagctttctcc 27663

                                     
Query: 251   ccgtactccttggccttcctcctc 274
             ||||||||||| ||||||||||||
Sbjct: 27664 ccgtactccttcgccttcctcctc 27687



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 400   gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
             |||||| ||||||||||| ||  | ||| |||||||||||||||||||||
Sbjct: 27802 gccgacgccgagcacgtcgacgacgagccgctcgttcaggaactggtcgg 27851
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>dbj|AP005917.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0235A04
          Length = 23787

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 60/67 (89%)
 Strand = Plus / Plus

                                                                        
Query: 218  cctcctttctccatggccctccgtgctttcgcgccgtactccttggccttcctcctcctc 277
            ||||||||||||||||| || || |||||| | ||||||||||| |||||||||||||||
Sbjct: 7956 cctcctttctccatggctctgcgagctttctccccgtactccttcgccttcctcctcctc 8015

                   
Query: 278  tcttcgg 284
            || ||||
Sbjct: 8016 tcgtcgg 8022



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                              
Query: 400  gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
            |||||| ||||||||||| || || ||| |||||||||||||||||||||
Sbjct: 8138 gccgacgccgagcacgtcgacggcgagccgctcgttcaggaactggtcgg 8187
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>ref|XM_464568.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 528

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 400 gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
           |||||| ||||||||||| || || ||| ||||||| |||||||||||||
Sbjct: 405 gccgacgccgagcacgtcgacggcgagccgctcgtttaggaactggtcgg 356
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>ref|XM_470368.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 690

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 400 gccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
           |||||| ||||||||||| ||  | ||| |||||||||||||||||||||
Sbjct: 237 gccgacgccgagcacgtcgacgacgagccgctcgttcaggaactggtcgg 188
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>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0048D11, from chromosome 3, complete sequence
          Length = 158911

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                              
Query: 401   ccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
             |||| ||||||||| ||||| |||| || | ||||||||||||||||||
Sbjct: 31953 ccgatcccgagcacctccaccgccatcttcgcgttcaggaactggtcgg 31905
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>dbj|AK109711.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-H01, full
           insert sequence
          Length = 1491

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 401 ccgaccccgagcacgtccacagccagctgctcgttcaggaactggtcgg 449
           |||| ||||||||| ||||| |||| || | ||||||||||||||||||
Sbjct: 147 ccgatcccgagcacctccaccgccatcttcgcgttcaggaactggtcgg 195
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 337     cagcaccggcgcggccgcgtcgtcgt 362
               |||| |||||||||||||||||||||
Sbjct: 1013486 cagcgccggcgcggccgcgtcgtcgt 1013461
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 337     cagcaccggcgcggccgcgtcgtcgt 362
               |||| |||||||||||||||||||||
Sbjct: 1829951 cagcgccggcgcggccgcgtcgtcgt 1829926
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>gb|AC124392.6| Mus musculus BAC clone RP24-441F24 from chromosome 13, complete sequence
          Length = 159514

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 265    cttcctcctcctctcttcggcctcctcccc 294
              ||||||||||||||||||  ||||||||||
Sbjct: 155316 cttcctcctcctctcttcttcctcctcccc 155345
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>gb|AC122346.4| Mus musculus BAC clone RP23-368L6 from 13, complete sequence
          Length = 198130

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 265   cttcctcctcctctcttcggcctcctcccc 294
             ||||||||||||||||||  ||||||||||
Sbjct: 63160 cttcctcctcctctcttcttcctcctcccc 63189
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>gb|AC138355.17| Mus musculus chromosome 8, clone RP24-281G1, complete sequence
          Length = 154808

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 264   ccttcctcctcctctcttcggcctcctcc 292
             |||||||||||||||||||  ||||||||
Sbjct: 70128 ccttcctcctcctctcttcctcctcctcc 70100
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>gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, complete sequence
          Length = 157478

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 264  ccttcctcctcctctcttcggcctcctcc 292
            |||||||||||||||||||  ||||||||
Sbjct: 5745 ccttcctcctcctctcttcctcctcctcc 5773
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>gb|AC109162.12| Mus musculus chromosome 7, clone RP24-177G14, complete sequence
          Length = 176990

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 261    tggccttcctcctcctctctt 281
              |||||||||||||||||||||
Sbjct: 112239 tggccttcctcctcctctctt 112219
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>gb|BC083510.1| Homo sapiens inositol 1,3,4-triphosphate 5/6 kinase, mRNA (cDNA clone
            IMAGE:6460756), **** WARNING: chimeric clone ****
          Length = 6519

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 257  tccttggccttcctcctcctc 277
            |||||||||||||||||||||
Sbjct: 5721 tccttggccttcctcctcctc 5701
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>emb|AL834433.1|HSM805525 Homo sapiens mRNA; cDNA DKFZp762C186 (from clone DKFZp762C186)
          Length = 4703

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 257 tccttggccttcctcctcctc 277
           |||||||||||||||||||||
Sbjct: 649 tccttggccttcctcctcctc 629
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>emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chromosome 11 Contains the
            Tbx4 gene for T-box 4, a ribosomal protein L21 (Rpl21)
            pseudogene and the 3' end of the Brip1 gene for BRCA1
            interacting protein C-terminal helicase 1, complete
            sequence
          Length = 238358

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 274  cctctcttcggcctcctcccc 294
            |||||||||||||||||||||
Sbjct: 6168 cctctcttcggcctcctcccc 6148
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>gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, complete sequence
          Length = 187364

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 274   cctctcttcggcctcctcccc 294
             |||||||||||||||||||||
Sbjct: 59612 cctctcttcggcctcctcccc 59592
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>dbj|AK143508.1| Mus musculus 8 cells embryo 8 cells cDNA, RIKEN full-length enriched
            library, clone:E860103I22 product:hypothetical protein,
            full insert sequence
          Length = 4484

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 274  cctctcttcggcctcctcccc 294
            |||||||||||||||||||||
Sbjct: 1946 cctctcttcggcctcctcccc 1926
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>gb|AC073957.7| Homo sapiens BAC clone RP11-449P15 from 7, complete sequence
          Length = 196204

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 264   ccttcctcctcctctcttcggcctcctcc 292
             |||||||||||||||||||  ||||||||
Sbjct: 63387 ccttcctcctcctctcttcctcctcctcc 63359



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 264   ccttcctcctcctctcttcggcctcctc 291
             |||||||||||||||||||  |||||||
Sbjct: 64753 ccttcctcctcctctcttcctcctcctc 64726



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 264   ccttcctcctcctctcttcggcctcctc 291
             |||||||||||||||||||  |||||||
Sbjct: 64509 ccttcctcctcctctcttcctcctcctc 64482
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>ref|XM_941451.1| PREDICTED: Homo sapiens EH domain binding protein 1-like 1,
           transcript variant 9 (EHBP1L1), mRNA
          Length = 5173

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 257 tccttggccttcctcctcctc 277
           |||||||||||||||||||||
Sbjct: 946 tccttggccttcctcctcctc 926
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>ref|XM_170658.3| PREDICTED: Homo sapiens EH domain binding protein 1-like 1,
           transcript variant 1 (EHBP1L1), mRNA
          Length = 5173

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 257 tccttggccttcctcctcctc 277
           |||||||||||||||||||||
Sbjct: 946 tccttggccttcctcctcctc 926
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>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
            complete sequence
          Length = 115270

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 251  ccgtactccttggccttcctcctcctctc 279
            ||||||||||| |||||||| ||||||||
Sbjct: 7493 ccgtactccttcgccttcctgctcctctc 7521
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>dbj|AK024451.1| Homo sapiens mRNA for FLJ00043 protein, partial cds
          Length = 4421

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 257 tccttggccttcctcctcctc 277
           |||||||||||||||||||||
Sbjct: 364 tccttggccttcctcctcctc 344
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>emb|AL683878.9| Mouse DNA sequence from clone RP23-201G13 on chromosome 2, complete
             sequence
          Length = 195221

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 265   cttcctcctcctctcttcggcctcctccc 293
             ||||||||||||||||||  |||||||||
Sbjct: 15328 cttcctcctcctctcttcctcctcctccc 15356
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>dbj|AP001362.5| Homo sapiens genomic DNA, chromosome 11, clone:RP11-856B14, complete
             sequence
          Length = 211382

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   tccttggccttcctcctcctc 277
             |||||||||||||||||||||
Sbjct: 61721 tccttggccttcctcctcctc 61701
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>gb|AC144852.3| Mus musculus BAC clone RP24-341K21 from chromosome 10, complete sequence
          Length = 169565

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 285    cctcctccccaccctgcatgagct 308
              |||||||||||||||| |||||||
Sbjct: 131094 cctcctccccaccctggatgagct 131117
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>ref|NM_177615.2| Mus musculus expressed sequence C78409 (C78409), mRNA
          Length = 3603

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 285  cctcctccccaccctgcatgagct 308
            |||||||||||||||| |||||||
Sbjct: 1037 cctcctccccaccctggatgagct 1060
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0079L11,
              complete sequence
          Length = 124104

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 252    cgtactccttggccttcctcctcc 275
              |||||||||| |||||||||||||
Sbjct: 112308 cgtactccttcgccttcctcctcc 112285
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>gb|AC129609.3| Mus musculus BAC clone RP23-194H4 from chromosome 7, complete sequence
          Length = 225829

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 267   tcctcctcctctcttcggcctcctcccc 294
             ||||||||||||||||  ||||||||||
Sbjct: 74714 tcctcctcctctcttcctcctcctcccc 74687



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 267   tcctcctcctctcttcggcctcctcccc 294
             ||||||||||||||||  ||||||||||
Sbjct: 74666 tcctcctcctctcttcctcctcctcccc 74639
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>gb|AC127355.4| Mus musculus BAC clone RP23-96F6 from chromosome 7, complete sequence
          Length = 150343

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 267   tcctcctcctctcttcggcctcctcccc 294
             ||||||||||||||||  ||||||||||
Sbjct: 87570 tcctcctcctctcttcctcctcctcccc 87543
to top
>emb|AL356096.11| Human DNA sequence from clone RP11-366K1 on chromosome 13 Contains a
              novel gene and a CpG island, complete sequence
          Length = 190101

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 254    tactccttggccttcctcctcctc 277
              ||||||||| ||||||||||||||
Sbjct: 187303 tactccttgaccttcctcctcctc 187326
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>emb|AL138914.9| Human DNA sequence from clone RP11-15L1 on chromosome 13 Contains part
             of a novel gene, complete sequence
          Length = 153439

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   ttggccttcctcctcctctc 279
             ||||||||||||||||||||
Sbjct: 35341 ttggccttcctcctcctctc 35360
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>gb|AC103018.7| Rattus norvegicus 1 CH230-196F22 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 212568

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    ctccttggccttcctcctcc 275
              ||||||||||||||||||||
Sbjct: 109576 ctccttggccttcctcctcc 109595
to top
>emb|AL645810.5| Zebrafish DNA sequence from clone BUSM1-37K09 Contains the cntn2 gene
            (contactin 2), a transposase pseudogene and four CpG
            islands, complete sequence
          Length = 86708

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 81   aatgcagtgatttgaaggat 100
            ||||||||||||||||||||
Sbjct: 6262 aatgcagtgatttgaaggat 6243
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>emb|AJ304858.2|ECO304858 Bacteriophage CP-1639 and chromosomal integration site
          Length = 50625

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 390   caatccggaggccgaccccgagca 413
             |||||||||||||||||| |||||
Sbjct: 38254 caatccggaggccgacccggagca 38277
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>emb|BX323033.6| Zebrafish DNA sequence from clone DKEYP-63D11, complete sequence
          Length = 171058

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    aatgcagtgatttgaaggat 100
             ||||||||||||||||||||
Sbjct: 96371 aatgcagtgatttgaaggat 96390
to top
>gb|AC037479.9| Homo sapiens chromosome 15, clone RP11-616M17, complete sequence
          Length = 177761

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     agtgatttgaaggatctact 105
              ||||||||||||||||||||
Sbjct: 147251 agtgatttgaaggatctact 147232
to top
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   ccgcgtcgtcgttcaggatc 370
             ||||||||||||||||||||
Sbjct: 13047 ccgcgtcgtcgttcaggatc 13028
to top
>gb|AC022960.13| Homo sapiens chromosome 18, clone RP11-210K20, complete sequence
          Length = 171051

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 265   cttcctcctcctctcttcggcctcctcc 292
             ||||||||||||||||||  ||||||||
Sbjct: 63490 cttcctcctcctctcttcctcctcctcc 63463
to top
>gb|AC015660.8| Homo sapiens chromosome 15, clone RP11-20G13, complete sequence
          Length = 167697

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     agtgatttgaaggatctact 105
              ||||||||||||||||||||
Sbjct: 159995 agtgatttgaaggatctact 160014
to top
>dbj|AK052641.1| Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched
            library, clone:D630010I07 product:hypothetical protein,
            full insert sequence
          Length = 3603

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 285  cctcctccccaccctgcatgagct 308
            |||||||||||||||| |||||||
Sbjct: 1037 cctcctccccaccctggatgagct 1060
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 261      tggccttcctcctcctctcttcggcctcctcc 292
                |||||||||||| |||| | ||||||||||||
Sbjct: 29600515 tggccttcctccgcctcccctcggcctcctcc 29600484
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 252     cgtactccttggccttcctcctcc 275
               |||||||||| |||||||||||||
Sbjct: 1450646 cgtactccttcgccttcctcctcc 1450623
to top
>gb|AC069164.11|AC069164 Homo sapiens chromosome 13 clone RP11-338F18, complete sequence
          Length = 169903

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 254   tactccttggccttcctcctcctc 277
             ||||||||| ||||||||||||||
Sbjct: 35871 tactccttgaccttcctcctcctc 35894
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>gb|AC004968.1|AC004968 Homo sapiens PAC clone RP5-1119N5 from 14q24.3, complete sequence
          Length = 108822

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 265  cttcctcctcctctcttcggcctcctcc 292
            ||||||||||||||||||  ||||||||
Sbjct: 3286 cttcctcctcctctcttcctcctcctcc 3259
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>gb|AC011445.6|AC011445 Homo sapiens chromosome 19 clone CTC-246B18, complete sequence
          Length = 138538

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   gccttcctcctcctctcttc 282
             ||||||||||||||||||||
Sbjct: 92109 gccttcctcctcctctcttc 92128
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>ref|XM_579694.1| PREDICTED: Rattus norvegicus hypothetical gene supported by NM_172157
            (LOC497729), mRNA
          Length = 6071

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 265  cttcctcctcctctcttcggcctcctcc 292
            ||||||||||||||||||  ||||||||
Sbjct: 3289 cttcctcctcctctcttcctcctcctcc 3262
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 259     cttggccttcctcctcctct 278
               ||||||||||||||||||||
Sbjct: 1078862 cttggccttcctcctcctct 1078881
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>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1663_H12
          Length = 125422

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 261   tggccttcctcctcctctcttcggcctcctcc 292
             |||||||||||| |||| | ||||||||||||
Sbjct: 44100 tggccttcctccgcctcccctcggcctcctcc 44069
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 399     ggccgaccccgagcacgtcc 418
               ||||||||||||||||||||
Sbjct: 2655486 ggccgaccccgagcacgtcc 2655467
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>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0655A07
          Length = 172473

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 261    tggccttcctcctcctctcttcggcctcctcc 292
              |||||||||||| |||| | ||||||||||||
Sbjct: 165021 tggccttcctccgcctcccctcggcctcctcc 164990
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>emb|BX649262.4| Zebrafish DNA sequence from clone DKEY-174I8 in linkage group 20,
             complete sequence
          Length = 55019

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    aatgcagtgatttgaaggat 100
             ||||||||||||||||||||
Sbjct: 14611 aatgcagtgatttgaaggat 14592
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>emb|BX546465.7| Mouse DNA sequence from clone RP23-167N13 on chromosome 2, complete
             sequence
          Length = 81064

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 265   cttcctcctcctctcttcggcctcctcc 292
             ||||||||||||||||||  ||||||||
Sbjct: 22904 cttcctcctcctctcttcctcctcctcc 22877
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>gb|BC089587.1| Mus musculus cDNA clone MGC:107595 IMAGE:6757541, complete cds
          Length = 2578

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 285  cctcctccccaccctgcatgagct 308
            |||||||||||||||| |||||||
Sbjct: 1035 cctcctccccaccctggatgagct 1058
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>gb|L09121.2|TTHCBA Thermus thermophilus hypothetical gliding protein (mglB),
            hypothetical gliding protein (mglA), cytochrome oxidase
            II (cbaB), cytochrome oxidase I (cbaA), hypothetical
            protein, hypothetical protein, and 30S ribosomal protein
            S15 (rpsO) genes, complete cds
          Length = 6035

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 259  cttggccttcctcctcctct 278
            ||||||||||||||||||||
Sbjct: 5004 cttggccttcctcctcctct 5023
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>gb|AC152961.2| Mus musculus 6 BAC RP23-4H14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 227467

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    cttggccttcctcctcctct 278
              ||||||||||||||||||||
Sbjct: 116755 cttggccttcctcctcctct 116774
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 345     gcgcggccgcgtcgtcgttc 364
               ||||||||||||||||||||
Sbjct: 1520283 gcgcggccgcgtcgtcgttc 1520302
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    cttggccttcctcctcctct 278
              ||||||||||||||||||||
Sbjct: 751841 cttggccttcctcctcctct 751860
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>emb|AJ556162.1|LPH556162 Phage BP-4795 complete genome
          Length = 57930

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 390   caatccggaggccgaccccgagca 413
             |||||||||||||||||| |||||
Sbjct: 41707 caatccggaggccgacccggagca 41730
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>emb|AL935200.9| Zebrafish DNA sequence from clone CH211-237I5, complete sequence
          Length = 160710

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 81  aatgcagtgatttgaaggat 100
           ||||||||||||||||||||
Sbjct: 537 aatgcagtgatttgaaggat 518
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>gb|AC129720.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683F12,
             complete sequence
          Length = 144455

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 252   cgtactccttggccttcctcctcc 275
             |||||||||| |||||||||||||
Sbjct: 44726 cgtactccttcgccttcctcctcc 44703


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,297,972
Number of Sequences: 3902068
Number of extensions: 4297972
Number of successful extensions: 125052
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123636
Number of HSP's gapped (non-prelim): 1416
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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