Clone Information

BLAST Search Result

Clone Name	rbart25f09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)	89	5e-18
2	ERD10_ARATH (P42759) Dehydrin ERD10 (Low-temperature-induced pro...	37	0.016
3	COR47_ARATH (P31168) Dehydrin COR47 (Cold-induced COR47 protein)	36	0.047
4	ERD14_ARATH (P42763) Dehydrin ERD14	34	0.14
5	TAS14_LYCES (P22240) Abscisic acid and environmental stress-indu...	32	0.68
6	DHLEA_ARATH (Q96261) Probable dehydrin LEA	32	0.68
7	DHR21_ORYSA (P12253) Water stress-inducible protein Rab21	32	0.89
8	ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44	32	0.89
9	PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A me...	31	1.5
10	DHN3_HORVU (P12948) Dehydrin DHN3 (B17)	30	2.0
11	DHN4_HORVU (P12949) Dehydrin DHN4 (B18)	30	2.0
12	DHLE_RAPSA (P21298) Late embryogenesis abundant protein (Protein...	30	2.0
13	ECP40_DAUCA (Q07322) Embryogenic cell protein 40 (ECP40)	30	2.6
14	CS120_WHEAT (P46525) Cold-shock protein CS120	30	3.4
15	XERO2_ARATH (P42758) Dehydrin Xero 2 (Low-temperature-induced pr...	30	3.4
16	CS66_WHEAT (P46526) Cold shock protein CS66	30	3.4
17	UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Unco...	30	3.4
18	DH16B_ORYSA (P22911) Dehydrin Rab16B	29	4.4
19	SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (S...	29	4.4
20	TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) ...	29	5.8
21	COBL6_ARATH (O04500) COBRA-like protein 6 precursor	29	5.8
22	DHR15_WHEAT (Q00742) Dehydrin Rab15	29	5.8
23	DHR25_ORYSA (P30287) Dehydrin Rab25 (Drought-resistant protein 1...	29	5.8
24	DHR18_ARATH (P30185) Dehydrin Rab18	29	5.8
25	SMOC2_HUMAN (Q9H3U7) SPARC-related modular calcium-binding prote...	29	5.8
26	DHN1_MAIZE (P12950) Dehydrin DHN1 (M3) (RAB-17 protein)	29	5.8
27	DH16D_ORYSA (P22913) Dehydrin Rab16D	28	7.6
28	DHA_CRAPL (P22238) Desiccation-related protein clone PCC27-04	28	7.6
29	IRS1A_XENLA (Q91615) Insulin receptor substrate 1-A (IRS1-A) (xI...	28	7.6
30	TRUB_LEGPL (Q5WT38) tRNA pseudouridine synthase B (EC 5.4.99.-) ...	28	7.6
31	TRUB_LEGPH (Q5ZRV6) tRNA pseudouridine synthase B (EC 5.4.99.-) ...	28	7.6
32	ATM_NEUCR (Q7RZT9) Serine/threonine-protein kinase tel-1 (EC 2.7...	28	7.6
33	ISPZ_HAEDU (Q7VKZ1) Probable intracellular septation protein	28	7.6
34	IRS1B_XENLA (P84770) Insulin receptor substrate 1-B (IRS1-B) (xI...	28	7.6
35	DH16C_ORYSA (P22912) Dehydrin Rab16C	28	9.9
36	K10_DROME (P13468) DNA-binding protein K10 (Female sterile prote...	28	9.9
37	ALU4_HUMAN (P39191) Alu subfamily SB2 sequence contamination war...	28	9.9
38	ADEC_GEOKA (Q5KY53) Adenine deaminase (EC 3.5.4.2) (Adenase) (Ad...	28	9.9
39	XERO1_ARATH (P25863) Dehydrin Xero 1	28	9.9
40	FREM2_MOUSE (Q6NVD0) FRAS1-related extracellular matrix protein ...	28	9.9
41	CRK_XENLA (P87378) SH2/SH3 adaptor crk (Adapter molecule crk) (C...	28	9.9

>CO410_WHEAT (P46524) Dehydrin COR410 (Cold-induced COR410 protein)|
          Length = 262

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 42/45 (93%), Positives = 43/45 (95%)
 Frame = -1

Query: 435 EEVSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEHKPRA 301
           EEVSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAA +GEHKP A
Sbjct: 218 EEVSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAATGEHKPSA 262



 Score = 28.9 bits (63), Expect = 5.8
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 6/57 (10%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEHKPRA*SPPCPET------HHRTSI 259
           K+KKGL  K+  KLPG+  T          GEH     +P  P +      HH T +
Sbjct: 107 KKKKGLKEKLQGKLPGHKDT---------EGEHVTGLPAPAAPASVQTHGGHHDTDV 154

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>ERD10_ARATH (P42759) Dehydrin ERD10 (Low-temperature-induced protein LTI45)|
          Length = 260

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 5/37 (13%)
 Frame = -1

Query: 432 EVSSPDA---KEKKGLLGKIMDKLPGYH--KTGEEDK 337
           E ++P A   +EKKG + KI +KLPGYH   TGEE+K
Sbjct: 218 ETATPIADIPEEKKGFMDKIKEKLPGYHAKTTGEEEK 254



 Score = 33.5 bits (75), Expect = 0.24
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -1

Query: 432 EVSSPDAKEKKGLLGKIMDKLPGYHKTGEEDK 337
           E   P+ +EKKG + KI +KLPG+ K  E+ +
Sbjct: 178 EDHKPEEEEKKGFMDKIKEKLPGHSKKPEDSQ 209

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>COR47_ARATH (P31168) Dehydrin COR47 (Cold-induced COR47 protein)|
          Length = 265

 Score = 35.8 bits (81), Expect = 0.047
 Identities = 17/25 (68%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYH-KTGEED 340
           +EKKG+L KI +KLPGYH KT EE+
Sbjct: 232 EEKKGILEKIKEKLPGYHAKTTEEE 256



 Score = 35.0 bits (79), Expect = 0.081
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPS 322
           +EKKGL+ KI +KLPG+H    ED  A  S
Sbjct: 181 EEKKGLVEKIKEKLPGHHDEKAEDSPAVTS 210



 Score = 33.5 bits (75), Expect = 0.24
 Identities = 15/25 (60%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYH-KTGEED 340
           ++KKGL+ KI +KLPG+H KT E+D
Sbjct: 134 EDKKGLVEKIKEKLPGHHDKTAEDD 158

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>ERD14_ARATH (P42763) Dehydrin ERD14|
          Length = 185

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 17/26 (65%), Positives = 20/26 (76%), Gaps = 2/26 (7%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH--KTGEEDK 337
           EKKG+L KI +KLPGYH   T EE+K
Sbjct: 156 EKKGILEKIKEKLPGYHPKTTVEEEK 181



 Score = 32.7 bits (73), Expect = 0.40
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEHKPRA*SPPCPETH 274
           +EKKG + K+ +KLPG HK  E+  A A +    P    PP  E H
Sbjct: 113 EEKKGFMEKLKEKLPG-HKKPEDGSAVAAA----PVVVPPPVEEAH 153

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>TAS14_LYCES (P22240) Abscisic acid and environmental stress-inducible protein|
           TAS14 (Dehydrin TAS14)
          Length = 130

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = -1

Query: 438 AEEVSSPDAKEKKGLLGKIMDKLPGYHK------TGEEDK 337
           + E      + KKGL  KIM+K+PG H+      TGEE K
Sbjct: 77  SSEDDGEGGRRKKGLKEKIMEKMPGQHEGEYGQTTGEEKK 116



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 432 EVSSPDAKEKKGLLGKIMDKLPGYH 358
           E      +EKKG++ KI DK+PG H
Sbjct: 106 EYGQTTGEEKKGMMDKIKDKIPGMH 130

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>DHLEA_ARATH (Q96261) Probable dehydrin LEA|
          Length = 185

 Score = 32.0 bits (71), Expect = 0.68
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKKG+L KI DKLPG+H
Sbjct: 164 EKKGILEKIKDKLPGHH 180

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>DHR21_ORYSA (P12253) Water stress-inducible protein Rab21|
          Length = 172

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 438 AEEVSSPDAKEKKGLLGKIMDKLPGYH 358
           A   ++ D  EKKG++ KI +KLPG H
Sbjct: 146 AHGTTTTDTGEKKGIMDKIKEKLPGQH 172

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>ECP44_DAUCA (Q9XJ56) Phosphoprotein ECPP44|
          Length = 258

 Score = 31.6 bits (70), Expect = 0.89
 Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
 Frame = -1

Query: 405 KKGLLGKIMDKLPGYH-KTGEEDK 337
           KKG+L KI +K+PGYH KT  E++
Sbjct: 182 KKGILEKIKEKIPGYHPKTSTEEE 205



 Score = 31.6 bits (70), Expect = 0.89
 Identities = 17/37 (45%), Positives = 23/37 (62%)
 Frame = -1

Query: 435 EEVSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAP 325
           E V+ P+  +KKG + KI +KLPG  K  EE+  A P
Sbjct: 130 EVVTEPE--KKKGFMEKIKEKLPGGGKKVEEETVAPP 164

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>PHLA1_HUMAN (Q8WV24) Pleckstrin homology-like domain family A member 1 (T-cell|
           death-associated gene 51 protein) (Apoptosis-associated
           nuclear protein) (Proline- and histidine-rich protein)
           (Proline- and glutamine-rich protein) (PQ-rich protein)
          Length = 259

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 95  HPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIPPP*HGLKLKANTTHA 250
           HP P S P+  P+    H HP P+ +  P  Q  S P   HG +L  +T+++
Sbjct: 213 HPHPHSHPHSHPHP---HPHPHPHQIPHPHPQPHSQP---HGHRLLRSTSNS 258

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>DHN3_HORVU (P12948) Dehydrin DHN3 (B17)|
          Length = 161

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEH 313
           + KKGL  KI +KLPG H  G++ +     G+H
Sbjct: 74  RRKKGLKDKIKEKLPGGH--GDQQQTGGTYGQH 104



 Score = 28.9 bits (63), Expect = 5.8
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKKG++ KI +KLPG H
Sbjct: 145 EKKGIMDKIKEKLPGQH 161

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>DHN4_HORVU (P12949) Dehydrin DHN4 (B18)|
          Length = 225

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 417 DAKEKKGLLGKIMDKLPGYH 358
           D  EKKG++ KI +KLPG H
Sbjct: 206 DTGEKKGIMDKIKEKLPGQH 225

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>DHLE_RAPSA (P21298) Late embryogenesis abundant protein (Protein LEA)|
          Length = 184

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKKG+L KI +KLPG+H
Sbjct: 164 EKKGILEKIKEKLPGHH 180

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>ECP40_DAUCA (Q07322) Embryogenic cell protein 40 (ECP40)|
          Length = 306

 Score = 30.0 bits (66), Expect = 2.6
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKK +L KI DKLPG+H
Sbjct: 285 EKKSMLDKIKDKLPGHH 301

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>CS120_WHEAT (P46525) Cold-shock protein CS120|
          Length = 391

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -1

Query: 414 AKEKKGLLGKIMDKLPGYHKTGEEDKAAAPSG 319
           A EKKG++ KI +KLPG H  G+  + A   G
Sbjct: 8   AGEKKGIMEKIKEKLPGGH--GDHKETAGTHG 37



 Score = 28.9 bits (63), Expect = 5.8
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKK L+ KI DKLPG H
Sbjct: 375 EKKSLMDKIKDKLPGQH 391



 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 414 AKEKKGLLGKIMDKLPGYHKTGEE 343
           A EKKG++  I DKLPG H+  ++
Sbjct: 71  AGEKKGVMENIKDKLPGGHQDHQQ 94

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>XERO2_ARATH (P42758) Dehydrin Xero 2 (Low-temperature-induced protein LTI30)|
          Length = 193

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           +KKG+  KIM+KLPG+H
Sbjct: 11  QKKGITEKIMEKLPGHH 27



 Score = 28.9 bits (63), Expect = 5.8
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKKG+  K+M++LPG+H
Sbjct: 65  EKKGMTEKVMEQLPGHH 81



 Score = 28.9 bits (63), Expect = 5.8
 Identities = 10/17 (58%), Positives = 15/17 (88%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKKG+  K+M++LPG+H
Sbjct: 38  EKKGMTEKVMEQLPGHH 54



 Score = 28.1 bits (61), Expect = 9.9
 Identities = 11/19 (57%), Positives = 15/19 (78%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYHKT 352
           EKKG+  KI ++LPG+H T
Sbjct: 140 EKKGIAEKIKEQLPGHHGT 158

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>CS66_WHEAT (P46526) Cold shock protein CS66|
          Length = 469

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 414 AKEKKGLLGKIMDKLPGYHKTGEEDKAA 331
           A EKKG++ KI +KLPG H   +E   A
Sbjct: 8   AGEKKGIMEKIKEKLPGGHGDHKETAGA 35



 Score = 28.9 bits (63), Expect = 5.8
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKK L+ KI DKLPG H
Sbjct: 453 EKKSLMDKIKDKLPGQH 469



 Score = 28.5 bits (62), Expect = 7.6
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYHKTGEEDKAAAPSGE 316
           EKKGL+  I DKLPG H  G+  +     G+
Sbjct: 235 EKKGLMENIKDKLPGGH--GDHQQTGGTYGQ 263

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>UNC89_CAEEL (O01761) Muscle M-line assembly protein unc-89 (Uncoordinated protein|
            89)
          Length = 8081

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = -1

Query: 438  AEEVSSPDAKEKKGLLGKIMDKLPG--YHKTGEEDKAAAPSGEHKPRA*SPPCPE 280
            AEEV SP  KEK        +K P     KTG+E K  +P      +  SP  PE
Sbjct: 1424 AEEVKSPTKKEKSPSSPTKKEKSPSSPTKKTGDEVKEKSPPKSPTKKEKSPEKPE 1478

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>DH16B_ORYSA (P22911) Dehydrin Rab16B|
          Length = 164

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -1

Query: 417 DAKEKKGLLGKIMDKLPGYH 358
           +A EKKG + KI +KLPG H
Sbjct: 145 NAGEKKGFMDKIKEKLPGQH 164

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>SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB) [Contains: Peptide SR-17; Peptide
           HQ-34; Peptide KR-11]
          Length = 668

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
 Frame = -1

Query: 423 SPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAPSGEHK-----PRA*SPPCP 283
           SP+   + G   ++ +K PG+ +  EE++       H+     PRA +PP P
Sbjct: 375 SPEQDRRVGASSELRNKGPGHSEESEEERGDEGQRHHRAWAGGPRADAPPDP 426

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>TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 54  TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 167
           T    NN+   L+ +QD+ L Q  A +  ++ +I+HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAIQHLT 242

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>COBL6_ARATH (O04500) COBRA-like protein 6 precursor|
          Length = 454

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 144 SVWVYGLQFGPESGPGCCLSLFAYYYGHFV 55
           +V VY  QF     P CC+SL A+YY + V
Sbjct: 217 AVCVYS-QFRSSPSPKCCVSLSAFYYQNIV 245

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>DHR15_WHEAT (Q00742) Dehydrin Rab15|
          Length = 149

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKKG++ KI +KLPG H
Sbjct: 133 EKKGIMDKIKEKLPGQH 149



 Score = 28.9 bits (63), Expect = 5.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYHKTGEEDKA 334
           + KKG+  KI +KLPG HK  ++  A
Sbjct: 72  RRKKGMKEKIKEKLPGGHKDNQQHMA 97

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>DHR25_ORYSA (P30287) Dehydrin Rab25 (Drought-resistant protein 1) (rDRP1)|
          Length = 228

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 438 AEEVSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKA 334
           +E+      ++KK +  KI +KLPG HK  E+ +A
Sbjct: 154 SEDDGQGGRRKKKSIKEKIKEKLPGSHKQEEQKQA 188

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>DHR18_ARATH (P30185) Dehydrin Rab18|
          Length = 186

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -1

Query: 438 AEEVSSPDAKEKKGLLGKIMDKLPGYHKTGEEDKAAAPSG 319
           + E      + KKG+  KI +KLPG+H    + +A    G
Sbjct: 116 SSEDDGQGGRRKKGITQKIKEKLPGHHDQSGQAQAMGGMG 155

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>SMOC2_HUMAN (Q9H3U7) SPARC-related modular calcium-binding protein 2 precursor|
           (Secreted modular calcium-binding protein 2) (SMOC-2)
           (Smooth muscle-associated protein 2) (SMAP-2)
          Length = 446

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 390 GKIMDKLPGYHKTGEEDKAAAPSGEHKPR 304
           G + +KLP    TG+ D AAAP+ E +P+
Sbjct: 155 GSVNEKLPQREGTGKTDDAAAPALETQPQ 183

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>DHN1_MAIZE (P12950) Dehydrin DHN1 (M3) (RAB-17 protein)|
          Length = 168

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKKG++ KI +KLPG H
Sbjct: 152 EKKGIMDKIKEKLPGQH 168



 Score = 28.5 bits (62), Expect = 7.6
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYHKTGEEDKAAAPSG 319
           + KKG+  KI +KLPG HK  ++  A A +G
Sbjct: 92  RRKKGIKEKIKEKLPGGHK--DDQHATATTG 120

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>DH16D_ORYSA (P22913) Dehydrin Rab16D|
          Length = 151

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKKG++ KI +KLPG H
Sbjct: 135 EKKGIVDKIKEKLPGQH 151

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>DHA_CRAPL (P22238) Desiccation-related protein clone PCC27-04|
          Length = 117

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYH 358
           +EKKG++ KI +KLPG H
Sbjct: 100 EEKKGVMEKIKEKLPGQH 117

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>IRS1A_XENLA (Q91615) Insulin receptor substrate 1-A (IRS1-A) (xIRS-1-A)|
           (XIRS-L)
          Length = 885

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = +2

Query: 146 HKHPSPNGLHRPDLQRRSIPPP*HGLKLKANTTHANNLMEVR**VSGHGGDQALGLCSPE 325
           H+H   + LH P    RSIP P    +   + T   +L       SGHG      +C   
Sbjct: 150 HRHRGSSRLHPPLNHSRSIPMP--ATRCSPSATSPVSLSSSS--TSGHGSTSDC-MCPRR 204

Query: 326 GAAALSSSP 352
            +A++S SP
Sbjct: 205 SSASISGSP 213

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>TRUB_LEGPL (Q5WT38) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 54  TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 167
           T    NN+   L+ +QD+ L Q  A +  ++ +++HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAVQHLT 242

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>TRUB_LEGPH (Q5ZRV6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +3

Query: 54  TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 167
           T    NN+   L+ +QD+ L Q  A +  ++ +++HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAVQHLT 242

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>ATM_NEUCR (Q7RZT9) Serine/threonine-protein kinase tel-1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase tel-1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2953

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +3

Query: 87   LNNIQDLTLDQTEARIPKLNTSIRHLTGFTDRTFKDDQSLHLDTDLNLK 233
            ++N+ +  LDQT+    KL+ +++     T    +D+Q L ++T L L+
Sbjct: 1798 VHNVLEYELDQTQGMKQKLSEALKEWLTSTSPAARDNQKLLINTILYLR 1846

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>ISPZ_HAEDU (Q7VKZ1) Probable intracellular septation protein|
          Length = 183

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -3

Query: 172 KPVR*RMLVFSLGIRASVWSRVR-SWMLFKFICLLLRAL 59
           KPV   +L   L +   VW+R+   W +F  IC+L+  +
Sbjct: 98  KPVVKMLLAKELSLPTQVWNRLNLGWAIFFIICMLINII 136

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>IRS1B_XENLA (P84770) Insulin receptor substrate 1-B (IRS1-B) (xIRS-1-B)|
           (XIRS-L')
          Length = 1088

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 21/69 (30%), Positives = 30/69 (43%)
 Frame = +2

Query: 146 HKHPSPNGLHRPDLQRRSIPPP*HGLKLKANTTHANNLMEVR**VSGHGGDQALGLCSPE 325
           H+H   + LH P    RSIP P    +   + T   +L       SGHG      +C   
Sbjct: 353 HRHRGSSRLHPPLNHSRSIPMP--ATRCSPSATSPVSLSSSS--TSGHGSTSDC-MCPRR 407

Query: 326 GAAALSSSP 352
            +A++S SP
Sbjct: 408 SSASISGSP 416

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>DH16C_ORYSA (P22912) Dehydrin Rab16C|
          Length = 164

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -1

Query: 408 EKKGLLGKIMDKLPGYH 358
           EKKG + KI +KLPG H
Sbjct: 148 EKKGFMDKIKEKLPGQH 164

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>K10_DROME (P13468) DNA-binding protein K10 (Female sterile protein K10)|
          Length = 463

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = +2

Query: 83  KLKQHPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQRRSIP 205
           K +QHP P+     SP  Q   +HPSPN    P   ++  P
Sbjct: 126 KQQQHPSPNQQQPPSPNQQ---QHPSPNQQQHPSPNQQQHP 163

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>ALU4_HUMAN (P39191) Alu subfamily SB2 sequence contamination warning entry|
          Length = 603

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = -1

Query: 339 KAAAPSGEHKPRA*SPPCPETHHRTSIKLLACVVFALSLSPCQGG 205
           K   P   H P + SP    T  R   +L+ C+     +SPC  G
Sbjct: 430 KLRFPGSRHSPASASPVAGTTGARHRARLIFCIFSRDGVSPCXPG 474

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>ADEC_GEOKA (Q5KY53) Adenine deaminase (EC 3.5.4.2) (Adenase) (Adenine aminase)|
          Length = 577

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 19/80 (23%), Positives = 40/80 (50%)
 Frame = +3

Query: 18  LISRHNAQQ*TNTQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLTGFTDRTFKDD 197
           L+++H        +SA + +Q  L++I+   +D+T+ RIP    +  H+          +
Sbjct: 347 LVAQHGQTVFPAERSAESLEQPLLHSIRCQAVDETDLRIPMKRGTKAHVIEIIPNHLHTN 406

Query: 198 QSLHLDTDLNLKQTRHTPTI 257
              HL TD+++++    P+I
Sbjct: 407 ---HLITDVDVQEGAFCPSI 423

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>XERO1_ARATH (P25863) Dehydrin Xero 1|
          Length = 128

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 10/22 (45%), Positives = 17/22 (77%)
 Frame = -1

Query: 411 KEKKGLLGKIMDKLPGYHKTGE 346
           ++KKG+  KI +KLPG+H + +
Sbjct: 71  RKKKGITEKIKEKLPGHHDSNK 92

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>FREM2_MOUSE (Q6NVD0) FRAS1-related extracellular matrix protein 2 precursor (ECM3|
            homolog) (NV domain-containing protein 1)
          Length = 3160

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
 Frame = +3

Query: 111  LDQTEARIPKLNTSIRHLTGFTDRTFK------DDQSLHLDTDLNLKQTRHTPTI*WRSG 272
            L +TE  +  ++T + H++    +  K        + LH+    +L+  +H     W SG
Sbjct: 836  LRETELHVSDVDTDVTHISFTLTQAPKHGHMQISGRPLHVGGQFHLEDIKHGRISYWNSG 895

Query: 273  DES 281
            DES
Sbjct: 896  DES 898

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>CRK_XENLA (P87378) SH2/SH3 adaptor crk (Adapter molecule crk) (CRK2)|
          Length = 296

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 14/38 (36%), Positives = 16/38 (42%)
 Frame = +2

Query: 80  NKLKQHPGPDSGPN*SPYTQTEHKHPSPNGLHRPDLQR 193
           N+   HP P  GP   PY Q     P PN  + P   R
Sbjct: 197 NQENSHPQPLGGPEPGPYAQPSVNTPLPNLQNGPIFAR 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,346,497
Number of Sequences: 219361
Number of extensions: 1341207
Number of successful extensions: 3596
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 3444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3594
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result