>ref|XM_322589.1| Neurospora crassa OR74A hypothetical protein (NCU03332.1) partial
           mRNA
          Length = 939

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 154 ccaccatccacggcccacgcctgcgcgttcacataactgctctcatcact 203
           ||||||||||| ||||| || |||||||| ||||| || |||||||||||
Sbjct: 896 ccaccatccaccgcccatgcttgcgcgttgacatagctactctcatcact 847

>ref|XM_950803.1| Neurospora crassa OR74A hypothetical protein (NCU03332.1) partial
           mRNA
          Length = 939

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 154 ccaccatccacggcccacgcctgcgcgttcacataactgctctcatcact 203
           ||||||||||| ||||| || |||||||| ||||| || |||||||||||
Sbjct: 896 ccaccatccaccgcccatgcttgcgcgttgacatagctactctcatcact 847

>emb|BX284749.1|NCB10C3 Neurospora crassa DNA linkage group II BAC clone B10C3
          Length = 71352

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 154   ccaccatccacggcccacgcctgcgcgttcacataactgctctcatcact 203
             ||||||||||| ||||| || |||||||| ||||| || |||||||||||
Sbjct: 20052 ccaccatccaccgcccatgcttgcgcgttgacatagctactctcatcact 20003

>ref|XM_653086.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0574.2), mRNA
          Length = 864

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 166 gcccacgcctgcgcgttcacataactgctctcatcactcgccaagaaca 214
           |||||||||||| ||||||| ||||| |||||||| ||  |||||||||
Sbjct: 809 gcccacgcctgcccgttcacgtaactactctcatcgcttcccaagaaca 761

>ref|XM_741260.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g01040)
           partial mRNA
          Length = 762

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 415 accgccgccttggacgccgagta 437
           |||||||||||||||||||||||
Sbjct: 476 accgccgccttggacgccgagta 454

>gb|AC121275.20| Mus musculus chromosome 8, clone RP24-234C3, complete sequence
          Length = 158075

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 75     acccctttttacatccaacag 95
              |||||||||||||||||||||
Sbjct: 150584 acccctttttacatccaacag 150604

>gb|AC131953.1| Homo sapiens BAC clone RP11-632F7 from 4, complete sequence
          Length = 133973

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 124  cctgggacaaaaggcatgccaccac 148
            |||||||||| ||||||||||||||
Sbjct: 9135 cctgggacaacaggcatgccaccac 9111

>gb|AC121952.4| Mus musculus BAC clone RP24-217M18 from chromosome 8, complete sequence
          Length = 111845

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     acccctttttacatccaacag 95
              |||||||||||||||||||||
Sbjct: 106112 acccctttttacatccaacag 106092

>gb|AC161376.2| Mus musculus BAC clone RP23-264M10 from chromosome 16, complete sequence
          Length = 199086

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    tcacataactgctctcatca 201
              ||||||||||||||||||||
Sbjct: 128049 tcacataactgctctcatca 128030

>gb|AY659092.1| Synthetic construct Peudomonas aeruginosa clone FLH037357.01F
           PA5161 gene, partial cds
          Length = 1059

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 gccgccttggacgccgagta 437
           ||||||||||||||||||||
Sbjct: 494 gccgccttggacgccgagta 475

>gb|AC068607.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-392C14, complete
              sequence
          Length = 218081

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 125    ctgggacaaaaggcatgccaccac 148
              ||||||| ||||||||||||||||
Sbjct: 132714 ctgggactaaaggcatgccaccac 132691

>ref|XM_745912.1| Aspergillus fumigatus Af293 3-oxoacyl-acyl-carrier-protein
           reductase (Afu6g11210) partial mRNA
          Length = 972

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 321 cgtcatccccgtctcgatca 340
           ||||||||||||||||||||
Sbjct: 762 cgtcatccccgtctcgatca 743

>ref|XM_381645.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01469.1)
           partial mRNA
          Length = 909

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 265 agctgcccaatcttcttctcacttcccc 292
           ||||| ||||||||||||||||| ||||
Sbjct: 755 agctgaccaatcttcttctcactgcccc 728

>emb|X56744.1|PPTRYP P.platessa mRNA for trypsinogen
          Length = 893

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 367 atcccactgcccacaagctg 386
           ||||||||||||||||||||
Sbjct: 381 atcccactgcccacaagctg 400

>emb|AL807577.1|AFA12H2 Aspergillus fumigatus BAC AFA12F2
          Length = 79718

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 321   cgtcatccccgtctcgatca 340
             ||||||||||||||||||||
Sbjct: 61477 cgtcatccccgtctcgatca 61496

>emb|AJ298597.1|PAE98597 Pseudomonas aeruginosa rmlB gene for dTDP-D-glucose 4,6-dehydratase
          Length = 1059

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 gccgccttggacgccgagta 437
           ||||||||||||||||||||
Sbjct: 494 gccgccttggacgccgagta 475

>gb|AC090137.4| Homo sapiens chromosome 8, clone RP11-56A10, complete sequence
          Length = 169989

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   ggggcaaacagcattacacc 364
             ||||||||||||||||||||
Sbjct: 73802 ggggcaaacagcattacacc 73783

>gb|AE012160.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 68
           of 460 of the complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 gccgccttggacgccgagta 437
           ||||||||||||||||||||
Sbjct: 635 gccgccttggacgccgagta 616

>gb|AF204145.1| Xanthomonas campestris pv. campestris LPS biosynthetic cluster,
            partial sequence; and putative electron-transferring
            flavoprotein beta subunit (etfS) and putative
            electron-transferring flavoprotein alpha subunit (etfL)
            genes, complete cds
          Length = 37753

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 418  gccgccttggacgccgagta 437
            ||||||||||||||||||||
Sbjct: 8447 gccgccttggacgccgagta 8466

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 418     gccgccttggacgccgagta 437
               ||||||||||||||||||||
Sbjct: 4294921 gccgccttggacgccgagta 4294940

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 154      ccaccatccacggcccacgc 173
                ||||||||||||||||||||
Sbjct: 31615669 ccaccatccacggcccacgc 31615688

>gb|AC092609.2| Homo sapiens BAC clone RP11-160A16 from 4, complete sequence
          Length = 150751

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    ctgggacaaaaggcatgccaccac 148
              ||||||| ||||||||||||||||
Sbjct: 117394 ctgggactaaaggcatgccaccac 117417

>gb|AC008892.7| Homo sapiens chromosome 5 clone CTD-2227I18, complete sequence
          Length = 113628

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   gacaaaaggcatgccaccac 148
             ||||||||||||||||||||
Sbjct: 81658 gacaaaaggcatgccaccac 81677

>gb|AE004929.1| Pseudomonas aeruginosa PAO1, section 490 of 529 of the complete
           genome
          Length = 10638

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 418 gccgccttggacgccgagta 437
           ||||||||||||||||||||
Sbjct: 871 gccgccttggacgccgagta 852

>dbj|AP004774.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0431B06
          Length = 154796

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 154    ccaccatccacggcccacgc 173
              ||||||||||||||||||||
Sbjct: 106229 ccaccatccacggcccacgc 106248

>dbj|AP000763.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-809N8, complete
              sequence
          Length = 189920

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 394    catgtctgcataagactaacaacc 417
              ||||||||||||| ||||||||||
Sbjct: 112816 catgtctgcataatactaacaacc 112839

>gb|AC161875.5| Mus musculus BAC clone RP24-349D15 from chromosome 16, complete sequence
          Length = 163441

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 272    caatcttcttctcacttcccctcgctct 299
              ||||||||||||| ||||||||| ||||
Sbjct: 104984 caatcttcttctctcttcccctccctct 104957

>gb|AC125371.4| Mus musculus BAC clone RP24-401O6 from 16, complete sequence
          Length = 194685

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   tcacataactgctctcatca 201
             ||||||||||||||||||||
Sbjct: 31718 tcacataactgctctcatca 31699

>emb|AJ430371.1|SLA430371 Silene latifolia partial mRNA from Men-470 gene
          Length = 408

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 255 caacggattcagctgcccaatctt 278
           ||||||| ||||||||||||||||
Sbjct: 200 caacggactcagctgcccaatctt 223


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,053,665
Number of Sequences: 3902068
Number of extensions: 3053665
Number of successful extensions: 49117
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49027
Number of HSP's gapped (non-prelim): 90
length of query: 510
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 488
effective length of database: 17,147,199,772
effective search space: 8367833488736
effective search space used: 8367833488736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)