ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart25f03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 311 cctagaacgtgatgaggcttgcaatcacgaggaagccgaccaggatgagcagcgccttga 370 ||||||| |||||||||||||||||||| || || || ||||||||||| |||||||| | Sbjct: 27301683 cctagaatgtgatgaggcttgcaatcacaagaaaaccaaccaggatgagaagcgccttca 27301624 Query: 371 ggtagacatccgcctgctg 389 |||| |||||||||||||| Sbjct: 27301623 ggtacacatccgcctgctg 27301605 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 16552795 ccgcctgctgctgctgctgc 16552814
>dbj|AK099519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030E05, full insert sequence Length = 1092 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 311 cctagaacgtgatgaggcttgcaatcacgaggaagccgaccaggatgagcagcgccttga 370 ||||||| |||||||||||||||||||| || || || ||||||||||| |||||||| | Sbjct: 794 cctagaatgtgatgaggcttgcaatcacaagaaaaccaaccaggatgagaagcgccttca 735 Query: 371 ggtagacatccgcctgctg 389 |||| |||||||||||||| Sbjct: 734 ggtacacatccgcctgctg 716
>dbj|AK062128.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-D12, full insert sequence Length = 1156 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 311 cctagaacgtgatgaggcttgcaatcacgaggaagccgaccaggatgagcagcgccttga 370 ||||||| |||||||||||||||||||| || || || ||||||||||| |||||||| | Sbjct: 791 cctagaatgtgatgaggcttgcaatcacaagaaaaccaaccaggatgagaagcgccttca 732 Query: 371 ggtagacatccgcctgctg 389 |||| |||||||||||||| Sbjct: 731 ggtacacatccgcctgctg 713
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 311 cctagaacgtgatgaggcttgcaatcacgaggaagccgaccaggatgagcagcgccttga 370 ||||||| |||||||||||||||||||| || || || ||||||||||| |||||||| | Sbjct: 27227283 cctagaatgtgatgaggcttgcaatcacaagaaaaccaaccaggatgagaagcgccttca 27227224 Query: 371 ggtagacatccgcctgctg 389 |||| |||||||||||||| Sbjct: 27227223 ggtacacatccgcctgctg 27227205 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 16506028 ccgcctgctgctgctgctgc 16506047
>emb|AL831809.3|CNS08CAM Oryza sativa chromosome 12, . BAC OJ1268_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146585 Score = 93.7 bits (47), Expect = 5e-16 Identities = 71/79 (89%) Strand = Plus / Minus Query: 311 cctagaacgtgatgaggcttgcaatcacgaggaagccgaccaggatgagcagcgccttga 370 ||||||| |||||||||||||||||||| || || || ||||||||||| |||||||| | Sbjct: 114715 cctagaatgtgatgaggcttgcaatcacaagaaaaccaaccaggatgagaagcgccttca 114656 Query: 371 ggtagacatccgcctgctg 389 |||| |||||||||||||| Sbjct: 114655 ggtacacatccgcctgctg 114637
>ref|XM_599153.2| PREDICTED: Bos taurus hepatocyte nuclear factor 3 beta (HNF-3b), mRNA Length = 1884 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 382 gcctgctgctgctgctgcccgggcg 406 ||||||||||||||||||||||||| Sbjct: 1544 gcctgctgctgctgctgcccgggcg 1520
>ref|XM_599805.2| PREDICTED: Bos taurus similar to IQ motif and Sec7 domain 1 (LOC521541), mRNA Length = 3876 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 386 gctgctgctgctgcccgggcggc 408 ||||||||||||||||||||||| Sbjct: 1117 gctgctgctgctgcccgggcggc 1095
>ref|NM_204232.1| Gallus gallus HIR histone cell cycle regulation defective homolog A (S. cerevisiae) (HIRA), mRNA Length = 3144 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgcc 400 |||||||||||||||||||||| Sbjct: 1304 tccgcctgctgctgctgctgcc 1283
>gb|AC158114.7| Mus musculus chromosome 5, clone RP23-371A16, complete sequence Length = 167040 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 ctgctgctgctgctgcccgggcggcg 409 ||||||||||||||||||||| |||| Sbjct: 140767 ctgctgctgctgctgcccgggaggcg 140742
>ref|XM_363932.1| Magnaporthe grisea 70-15 predicted protein (MG01858.4) partial mRNA Length = 2571 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 377 catccgcctgctgctgctgctg 398 |||||||||||||||||||||| Sbjct: 2224 catccgcctgctgctgctgctg 2203
>ref|XM_418667.1| PREDICTED: Gallus gallus similar to epsilon-sarcoglycan (LOC420567), mRNA Length = 1630 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgcc 400 |||||||||||||||||||||| Sbjct: 77 tccgcctgctgctgctgctgcc 56
>ref|XM_977431.1| PREDICTED: Mus musculus similar to CG40351-PA.3 (LOC665515), mRNA Length = 3360 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 ctgctgctgctgctgcccgggcggcg 409 ||||||||||||||||||||| |||| Sbjct: 91 ctgctgctgctgctgcccgggaggcg 66
>emb|X99375.1|GGCHIRA G.gallus mRNA for Chira protein Length = 3144 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgcc 400 |||||||||||||||||||||| Sbjct: 1304 tccgcctgctgctgctgctgcc 1283
>gb|AC091729.4| Homo sapiens BAC clone RP13-580H13 from 7, complete sequence Length = 104285 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 389 gctgctgctgcccgggcggcgc 410 |||||||||||||||||||||| Sbjct: 40256 gctgctgctgcccgggcggcgc 40235
>dbj|AK141316.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430027B02 product:hypothetical RNA-binding region RNP-1 (RNA recognition motif)/Proline-rich region profile/Eukaryotic RNA Recognition Motif (RRM) profile/Alanine-rich region profile containing protein, full insert sequence Length = 3366 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 ctgctgctgctgctgcccgggcggcg 409 ||||||||||||||||||||| |||| Sbjct: 97 ctgctgctgctgctgcccgggaggcg 72
>emb|BX950342.2| Gallus gallus finished cDNA, clone ChEST169e19 Length = 1914 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgcc 400 |||||||||||||||||||||| Sbjct: 81 tccgcctgctgctgctgctgcc 60
>gb|AC084018.28| Homo sapiens 12 BAC RP11-347I19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175754 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 384 ctgctgctgctgctgcccgggcggcg 409 ||||||||||||||||||||| |||| Sbjct: 147251 ctgctgctgctgctgcccgggaggcg 147226
>dbj|AB091180.1| Gallus gallus mRNA for HIRA, complete cds Length = 3060 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgcc 400 |||||||||||||||||||||| Sbjct: 1241 tccgcctgctgctgctgctgcc 1220
>ref|XM_468553.1| Oryza sativa (japonica cultivar-group), mRNA Length = 555 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 293 tccgcctgctgctgctgctgc 273
>gb|AY280368.1| Bison bonasus STAT5A gene, promoter region and exon 1 Length = 972 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccggg 404 ||||||||||||||||||||| Sbjct: 777 ctgctgctgctgctgcccggg 797
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgcc 400 ||||||||||||||||||||| Sbjct: 160804 ccgcctgctgctgctgctgcc 160784
>ref|XM_957531.1| Neurospora crassa OR74A hypothetical protein (NCU06984.1) partial mRNA Length = 4632 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 384 ctgctgctgctgctgcccgggcggc 408 ||||||||||||||||| ||||||| Sbjct: 181 ctgctgctgctgctgccagggcggc 157
>ref|XM_327269.1| Neurospora crassa OR74A hypothetical protein (NCU06984.1) partial mRNA Length = 4632 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 384 ctgctgctgctgctgcccgggcggc 408 ||||||||||||||||| ||||||| Sbjct: 181 ctgctgctgctgctgccagggcggc 157
>gb|AY814927.1| Schistosoma japonicum SJCHGC01731 protein mRNA, complete cds Length = 2391 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 278 aactgacaaatgacaatagtg 298 ||||||||||||||||||||| Sbjct: 2328 aactgacaaatgacaatagtg 2308
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cctgctgctgctgctgcccgg 403 ||||||||||||||||||||| Sbjct: 11300163 cctgctgctgctgctgcccgg 11300183 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 29753481 ccgcctgctgctgctgctgc 29753500 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 26034836 ccgcctgctgctgctgctgc 26034855 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgctgctgctgctgcccggg 404 |||||||||||||||||||| Sbjct: 24567780 tgctgctgctgctgcccggg 24567799 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 7438221 ccgcctgctgctgctgctgc 7438240
>ref|XM_807436.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053504055.60) partial mRNA Length = 654 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 647 tccgcctgctgctgctgctgc 627
>emb|AL441992.17| Human DNA sequence from clone RP11-545E17 on chromosome 9 Contains the gene for protein kinase PKNbeta (pknbeta), a novel gene, the ZDHHC12 gene for zinc finger, DHHC domain containing 12 (ZNF400, FLJ14524), the gene for ZYG homolog, a novel gene (FLJ10743), the ENDOG gene for endonuclease G, a novel gene (HSPC109), the 3' end of the CCBL1 gene for cysteine conjugate-beta lyase; cytoplasmic (glutamine transaminase K, kyneurenine aminotransferase) and six CpG islands, complete sequence Length = 166664 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccggg 404 ||||||||||||||||||||| Sbjct: 104812 ctgctgctgctgctgcccggg 104832
>gb|AC145491.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0085H08, from chromosome 3, complete sequence Length = 130656 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cctgctgctgctgctgcccgg 403 ||||||||||||||||||||| Sbjct: 79116 cctgctgctgctgctgcccgg 79136
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 454 tgcccgtggccatggccgtgtccat 478 ||||||||||| ||||||||||||| Sbjct: 117560 tgcccgtggccgtggccgtgtccat 117536
>gb|AY074920.1| Alpheus lottini 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; and 5.8S ribosomal RNA gene, partial sequence Length = 1829 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccggg 404 ||||||||||||||||||||| Sbjct: 823 ctgctgctgctgctgcccggg 843
>gb|AY119481.1| Drosophila melanogaster GH07148 full insert cDNA Length = 3962 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 gctgctgctgctgcccgggcggcgc 410 |||||||||||||||| |||||||| Sbjct: 716 gctgctgctgctgcccaggcggcgc 740
>gb|AC023745.3| Drosophila melanogaster X BAC RP98-26N1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179312 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 gctgctgctgctgcccgggcggcgc 410 |||||||||||||||| |||||||| Sbjct: 70914 gctgctgctgctgcccaggcggcgc 70890
>gb|AC009367.9| Drosophila melanogaster 3L BAC RP98-48B15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 178239 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 21108 tccgcctgctgctgctgctgc 21128
>gb|AC009378.7| Drosophila melanogaster 3L BAC RP98-9E8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 180387 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 131390 tccgcctgctgctgctgctgc 131410
>tpg|BK002218.1| TPA: TPA_inf: Drosophila melanogaster HDC10938 (HDC10938) gene, complete cds Length = 797 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 34 tccgcctgctgctgctgctgc 54
>dbj|AB218813.1| Rattus norvegicus mRNA for hypothetical protein, complete cds, brain endothelial cell derived gene-1 Length = 3410 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgcc 400 ||||||||||||||||||||| Sbjct: 256 ccgcctgctgctgctgctgcc 236
>ref|NM_001039163.1| Rattus norvegicus tumor suppressor candidate 5 (Tusc5), mRNA Length = 3410 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgcc 400 ||||||||||||||||||||| Sbjct: 256 ccgcctgctgctgctgctgcc 236
>ref|NM_134551.4| Drosophila melanogaster CG32506-RA (CG32506), mRNA Length = 3723 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 2465 tccgcctgctgctgctgctgc 2445
>ref|NM_132435.1| Drosophila melanogaster CG1582-RA (CG1582), mRNA Length = 4054 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 gctgctgctgctgcccgggcggcgc 410 |||||||||||||||| |||||||| Sbjct: 808 gctgctgctgctgcccaggcggcgc 832
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 387 ctgctgctgctgcccgggcgg 407 ||||||||||||||||||||| Sbjct: 3960190 ctgctgctgctgcccgggcgg 3960170
>gb|AC011758.6|AC011758 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone BACR25I22, complete sequence Length = 164942 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 42218 tccgcctgctgctgctgctgc 42198
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgccc 401 ||||||||||||||||||||| Sbjct: 6162363 cgcctgctgctgctgctgccc 6162343
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgcc 400 ||||||||||||||||||||| Sbjct: 24092315 ccgcctgctgctgctgctgcc 24092295 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 13401843 ccgcctgctgctgctgctgc 13401862
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cctgctgctgctgctgcccgg 403 ||||||||||||||||||||| Sbjct: 11296926 cctgctgctgctgctgcccgg 11296946 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 29844903 ccgcctgctgctgctgctgc 29844922 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 26126099 ccgcctgctgctgctgctgc 26126118 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 385 tgctgctgctgctgcccggg 404 |||||||||||||||||||| Sbjct: 24485249 tgctgctgctgctgcccggg 24485268 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 7436056 ccgcctgctgctgctgctgc 7436075
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 35802249 tccgcctgctgctgctgctgc 35802269
>gb|AC134230.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0005J15, complete sequence Length = 159270 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 383 cctgctgctgctgctgcccgg 403 ||||||||||||||||||||| Sbjct: 8460 cctgctgctgctgctgcccgg 8480
>dbj|AP004082.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1149_C12 Length = 120743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 72964 tccgcctgctgctgctgctgc 72984
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgccc 401 ||||||||||||||||||||| Sbjct: 25756 cgcctgctgctgctgctgccc 25736
>dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0486F07 Length = 154926 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgccc 401 ||||||||||||||||||||| Sbjct: 118380 cgcctgctgctgctgctgccc 118360
>dbj|AK120551.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130B13, full insert sequence Length = 1645 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 383 cctgctgctgctgctgcccgg 403 ||||||||||||||||||||| Sbjct: 700 cctgctgctgctgctgcccgg 680
>gb|AY530952.1| Zea mays unknown (Z576C20.2), putative heme oxygenase 1 (Z576C20.3), anthocyanin biosynthesis regulatory protein Pl1_B73 (Z576C20.4), putative growth-regulating factor 1 (Z576C20.6), and putative aminoalcoholphosphotransferase (Z576C20.14) genes, complete cds; and putative receptor protein kinase (Z576C20.21) gene, partial cds Length = 155173 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 109995 tccgcctgctgctgctgctgc 109975
>dbj|AK062655.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E11, full insert sequence Length = 937 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgccc 401 ||||||||||||||||||||| Sbjct: 354 cgcctgctgctgctgctgccc 334
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete sequence Length = 302538 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 144410 tccgcctgctgctgctgctgc 144390
>gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68 of 83 of the complete sequence Length = 257692 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 379 tccgcctgctgctgctgctgc 399 ||||||||||||||||||||| Sbjct: 31842 tccgcctgctgctgctgctgc 31862
>gb|AE003484.3| Drosophila melanogaster chromosome X, section 36 of 74 of the complete sequence Length = 314111 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 386 gctgctgctgctgcccgggcggcgc 410 |||||||||||||||| |||||||| Sbjct: 125965 gctgctgctgctgcccaggcggcgc 125941
>gb|AY610096.1| Sus scrofa clone Clu_6918.scr.msk.p1.Contig5, mRNA sequence Length = 2592 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgccc 401 ||||||||||||||||||||| Sbjct: 179 cgcctgctgctgctgctgccc 159
>emb|AL627314.6| Mouse DNA sequence from clone RP23-354H24 on chromosome 4, complete sequence Length = 196461 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgcc 400 ||||||||||||||||||||| Sbjct: 121716 ccgcctgctgctgctgctgcc 121696
>gb|BC108451.1| Xenopus laevis cDNA clone MGC:130703 IMAGE:7768659, complete cds Length = 2644 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 931 gcctgctgctgctgctgccc 912
>gb|BC085527.1| Danio rerio zgc:103470, mRNA (cDNA clone MGC:103470 IMAGE:7237164), complete cds Length = 1351 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gcttgcccgtggccatggcc 470 |||||||||||||||||||| Sbjct: 709 gcttgcccgtggccatggcc 690
>ref|NM_194613.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0023I19.11), mRNA Length = 1788 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 73 ccgcctgctgctgctgctgc 54
>gb|DQ214743.1| Taeniopygia guttata clone 0058P0014F06 RIKEN cDNA 1500031H01 gene-like mRNA, complete sequence Length = 1375 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ctgctgctgcccgggcggcg 409 |||||||||||||||||||| Sbjct: 442 ctgctgctgcccgggcggcg 423
>ref|NM_001031096.1| Gallus gallus additional sex combs like 2 (Drosophila) (ASXL2), mRNA Length = 5430 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 1084 cgcctgctgctgctgctgcc 1103
>ref|XM_450308.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2553 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 383 cctgctgctgctgctgcccgggcggcgc 410 ||||||||||||||||||| ||| |||| Sbjct: 2158 cctgctgctgctgctgccccggctgcgc 2185
>ref|XM_527350.1| PREDICTED: Pan troglodytes cytochrome P450, family 21, subfamily A, polypeptide 2 (LOC471972), mRNA Length = 1443 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 14 gcctgctgctgctgctgccc 33
>ref|NM_190311.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2481 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 2320 ccgcctgctgctgctgctgc 2301
>ref|NM_174226.2| Bos taurus ARP3 (actin-related protein 3, yeast) homolog (ACTR3), mRNA Length = 2506 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 109 cgcctgctgctgctgctgcc 90
>ref|XM_469201.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1608 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 552 ccgcctgctgctgctgctgc 571
>gb|AY953870.1| Oryza sativa (japonica cultivar-group) undeveloped tapetum 1 (UDT1) gene, udt1-1 allele, complete cds Length = 2051 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 396 ccgcctgctgctgctgctgc 377
>ref|NM_185754.1| Oryza sativa (japonica cultivar-group), mRNA Length = 684 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 160 ccgcctgctgctgctgctgc 141
>ref|XM_473771.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2475 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 668 cgcctgctgctgctgctgcc 649
>ref|XM_473463.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 796 ccgcctgctgctgctgctgc 777
>gb|AE017135.1| Yersinia pestis biovar Medievalis str. 91001 section 9 of 16 of the complete genome Length = 291326 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 2006 gcctgctgctgctgctgccc 2025
>gb|BT018267.1| Zea mays clone EL01T0202H05.c mRNA sequence Length = 1055 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 593 ccgcctgctgctgctgctgc 574
>gb|AF019413.1|HSMHCT8S22 Homo sapiens HLA class III region containing tenascin X (tenascin-X) gene, partial cds; cytochrome P450 21-hydroxylase (CYP21B), complement component C4 (C4B) G11, helicase (SKI2W), RD, complement factor B (Bf), and complement component C2 (C2) genes, complete cds Length = 109646 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 19854 gcctgctgctgctgctgccc 19835
>gb|AY225374.1| Pongo pygmaeus calcium channel voltage-dependent P/Q type alpha 1A subunit (CACNA1A) gene, partial cds Length = 223 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 130 ccgcctgctgctgctgctgc 111
>gb|AY225373.1| Gorilla gorilla calcium channel voltage-dependent P/Q type alpha 1A subunit (CACNA1A) gene, partial cds Length = 64 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 33 ccgcctgctgctgctgctgc 14
>gb|AY225372.1| Pan troglodytes calcium channel voltage-dependent P/Q type alpha 1A subunit (CACNA1A) gene, partial cds Length = 215 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 121 ccgcctgctgctgctgctgc 102
>gb|AY022967.1| Oryza sativa microsatellite MRG5292 containing (CTG)X12, closest to marker C3120, genomic sequence Length = 236 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 97 ccgcctgctgctgctgctgc 116
>gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genomic sequence, complete sequence Length = 125380 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 68296 ccgcctgctgctgctgctgc 68277
>gb|DQ145255.1| Drosophila miranda neo-Y psq gene, partial sequence Length = 1142 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 899 ccgcctgctgctgctgctgc 918
>gb|DQ145254.1| Drosophila miranda neo-X psq gene, partial sequence Length = 1184 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 274 ccgcctgctgctgctgctgc 255
>gb|BC077288.1| Xenopus laevis hypothetical protein LOC445852, mRNA (cDNA clone IMAGE:4965316), partial cds Length = 1700 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 960 gcctgctgctgctgctgccc 941
>gb|AC147427.2| Oryza sativa chromosome 3 B1394A07 genomic sequence, complete sequence Length = 175704 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tgctgctgctgctgcccggg 404 |||||||||||||||||||| Sbjct: 68080 tgctgctgctgctgcccggg 68061
>ref|XM_594733.2| PREDICTED: Bos taurus similar to TATA-box binding protein (TATA-box factor) (TATA binding factor) (TATA sequence-binding protein) (Transcription initiation factor TFIID TBP subunit) (LOC516578), mRNA Length = 1153 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 446 ccgcctgctgctgctgctgc 427
>gb|AC009844.7| Drosophila melanogaster clone BACR01L16, complete sequence Length = 168238 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 105367 ccgcctgctgctgctgctgc 105348
>gb|AC115484.2| Drosophila melanogaster clone BACR06K01, complete sequence Length = 168504 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 gtagacatccgcctgctgctgctgctgc 399 |||| |||| |||||||||||||||||| Sbjct: 98891 gtaggcatctgcctgctgctgctgctgc 98864
>ref|XM_414057.1| PREDICTED: Gallus gallus similar to v-crk-associated tyrosine kinase substrate (LOC415691), mRNA Length = 2657 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 856 ccgcctgctgctgctgctgc 837
>ref|XM_613870.2| PREDICTED: Bos taurus similar to Von Hippel-Lindau disease tumor suppressor (pVHL) (G7 protein) (LOC540957), mRNA Length = 1017 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 ggcggcgcgtgccggggggcagcg 426 |||||| ||||||||||||||||| Sbjct: 247 ggcggcccgtgccggggggcagcg 224
>ref|XM_425816.1| PREDICTED: Gallus gallus similar to prokineticin 1; prokineticin 1 precursor; black mamba toxin-related protein; mambakine (LOC428257), mRNA Length = 318 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 26 gcctgctgctgctgctgccc 45
>ref|XM_419614.1| PREDICTED: Gallus gallus similar to PACRG (LOC421576), mRNA Length = 1442 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 196 ccgcctgctgctgctgctgc 177
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 95980 ccgcctgctgctgctgctgc 95961
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 17896 ccgcctgctgctgctgctgc 17877
>ref|XM_873281.1| PREDICTED: Bos taurus similar to E1A binding protein p400, transcript variant 6 (LOC538310), mRNA Length = 9825 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 8281 ccgcctgctgctgctgctgc 8262
>ref|XM_873176.1| PREDICTED: Bos taurus similar to E1A binding protein p400, transcript variant 5 (LOC538310), mRNA Length = 9717 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 8173 ccgcctgctgctgctgctgc 8154
>ref|XM_864423.1| PREDICTED: Bos taurus similar to E1A binding protein p400, transcript variant 2 (LOC538310), mRNA Length = 9576 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 8032 ccgcctgctgctgctgctgc 8013
>ref|XM_872971.1| PREDICTED: Bos taurus similar to E1A binding protein p400, transcript variant 4 (LOC538310), mRNA Length = 9465 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 7921 ccgcctgctgctgctgctgc 7902
>ref|XM_618510.2| PREDICTED: Bos taurus similar to E1A binding protein p400, transcript variant 1 (LOC538310), mRNA Length = 9357 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 7813 ccgcctgctgctgctgctgc 7794
>gb|BC058415.1| Mus musculus RIKEN cDNA 4931406I20 gene, mRNA (cDNA clone MGC:67356 IMAGE:6813564), complete cds Length = 2910 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 81 ccgcctgctgctgctgctgc 100
>gb|BC056359.1| Mus musculus RIKEN cDNA 4931406I20 gene, mRNA (cDNA clone MGC:73462 IMAGE:6813564), complete cds Length = 2910 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 81 ccgcctgctgctgctgctgc 100
>ref|XM_582206.2| PREDICTED: Bos taurus similar to transcriptional regulating factor 1 (LOC505848), mRNA Length = 3747 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 787 ccgcctgctgctgctgctgc 768
>ref|NM_182767.3| Homo sapiens solute carrier family 6, member 15 (SLC6A15), transcript variant 1, mRNA Length = 4807 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 212 ctgctgctgctgctgcccgg 231
>ref|NM_018057.4| Homo sapiens solute carrier family 6, member 15 (SLC6A15), transcript variant 2, mRNA Length = 4227 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 212 ctgctgctgctgctgcccgg 231
>ref|NM_000068.2| Homo sapiens calcium channel, voltage-dependent, P/Q type, alpha 1A subunit (CACNA1A), transcript variant 1, mRNA Length = 7807 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 7253 ccgcctgctgctgctgctgc 7234
>gb|AC093953.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1057_C01, complete sequence Length = 142752 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 85306 ccgcctgctgctgctgctgc 85325
>ref|NM_025739.2| Mus musculus RIKEN cDNA 4931406I20 gene (4931406I20Rik), mRNA Length = 2910 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 81 ccgcctgctgctgctgctgc 100
>ref|NM_023035.1| Homo sapiens calcium channel, voltage-dependent, P/Q type, alpha 1A subunit (CACNA1A), transcript variant 2, mRNA Length = 7812 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 7258 ccgcctgctgctgctgctgc 7239
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 2357706 gcctgctgctgctgctgccc 2357725
>gb|AF279106.2| Uncultured marine gamma proteobacterium EBAC31A08 BAC sequence Length = 128758 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctg 398 |||||||||||||||||||| Sbjct: 124829 tccgcctgctgctgctgctg 124810
>emb|AJ249440.1|BTA249440 Bos taurus mRNA for transcription factor COUP-TFI (COUP-TFI gene) Length = 2205 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 244 ccgcctgctgctgctgctgc 225
>gb|AY458644.1| Uncultured bacterium 562 clone EBAC000-45B06 genomic sequence Length = 61185 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctg 398 |||||||||||||||||||| Sbjct: 25271 tccgcctgctgctgctgctg 25252
>ref|XM_542865.2| PREDICTED: Canis familiaris similar to forkhead box A2 (LOC485742), mRNA Length = 1997 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 1257 ccgcctgctgctgctgctgc 1238
>ref|XM_533932.2| PREDICTED: Canis familiaris similar to Complement C3 precursor (LOC476728), mRNA Length = 4689 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 60 ccgcctgctgctgctgctgc 79
>emb|CT009734.9| Mouse DNA sequence from clone RP23-182E3 on chromosome 14, complete sequence Length = 202398 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gaatcaaaattacacatgat 21 |||||||||||||||||||| Sbjct: 101742 gaatcaaaattacacatgat 101723
>emb|CR954256.1| Anopheles gambiae Pen-1 region; BAC clones 30N20, 10K02, 13E09, 31J16 and 01G10 from library NotreDame1 of Anopheles gambiae (African malaria mosquito) strain PEST Length = 447895 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 177336 ctgctgctgctgctgcccgg 177355
>ref|XM_744961.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g03040) partial mRNA Length = 1380 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 934 ccgcctgctgctgctgctgc 915
>gb|AC146037.1| Pan troglodytes BAC clone RP43-44A5 from 7, complete sequence Length = 177637 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aaattacacatgatatataa 27 |||||||||||||||||||| Sbjct: 28680 aaattacacatgatatataa 28661
>gb|AC113203.10| Mus musculus chromosome 5, clone RP23-276C23, complete sequence Length = 201674 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 acatccgcctgctgctgctgctgc 399 |||||| ||||||||||||||||| Sbjct: 91936 acatcctcctgctgctgctgctgc 91959
>gb|AC125349.3| Mus musculus BAC clone RP23-394P9 from chromosome 3, complete sequence Length = 194060 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 186395 ccgcctgctgctgctgctgc 186414
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 76776 ccgcctgctgctgctgctgc 76795
>gb|AC124439.4| Mus musculus BAC clone RP24-261N14 from chromosome 9, complete sequence Length = 162530 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 58479 ccgcctgctgctgctgctgc 58498
>emb|AL662849.8| Human DNA sequence from clone XXbac-116I9 on chromosome 6 contains the C2 gene for complement component 2, the Bf gene for B-factor, properdin, the RDBP gene for RD RNA-binding protein, the SKIV2L gene for superkiller viralicidic activity 2-like (S. cerevisiae), the DOM3Z gene for dom-3 homolog Z (C. elegans), the STK19 gene for serine/threonine kinase 19, the C4A gene for complement component 4B, the 3' end of the CYP21A2 gene for cytochrome P450, subfamily XXIA (steroid 21-hydroxylase, congenital adrenal hyperplasia), polypeptide 2 and four CpG islands, complete sequence Length = 88459 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 85498 gcctgctgctgctgctgccc 85517
>gb|AY372454.1| Uncultured marine gamma proteobacterium EB000-45B06 fosmid clone Length = 61173 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctg 398 |||||||||||||||||||| Sbjct: 25271 tccgcctgctgctgctgctg 25252
>gb|AC110540.7| Mus musculus chromosome 3, clone RP23-105B8, complete sequence Length = 232416 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 16895 ccgcctgctgctgctgctgc 16876
>gb|AC154993.9| Mus musculus chromosome 3, clone RP23-246L14, complete sequence Length = 208416 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 163179 ccgcctgctgctgctgctgc 163160
>ref|NG_000013.2| Homo sapiens MHC class III complement gene cluster, monomodular haplotype (MCGC@) on chromosome 6 Length = 180017 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 90225 gcctgctgctgctgctgccc 90206
>emb|AL929593.6| Human DNA sequence from clone DAQB-124C11 on chromosome 6 Contains the 3' end of the C4A for complement component 4A, the CYP21A2 gene for cytochrome P450, family 21, subfamily A, polypepide 2, the 3' end of the TNXB gene for tenascin XB, and 0 CpG islands, complete sequence Length = 57339 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 8360 gcctgctgctgctgctgccc 8379
>emb|AL929101.4| Human DNA sequence from clone RP11-22B10 on chromosome X Contains the GSPT2 gene for G1 to S phase transition 2, a pseudogene similar to part of p30 (nuclear protein p30), a zinc finger protein pseudogene, the 5' end of a variant of the MAGED1 gene for melanoma antigen, family D, 1 and two CpG islands, complete sequence Length = 157110 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tataattggtctggtacatc 42 |||||||||||||||||||| Sbjct: 36345 tataattggtctggtacatc 36364
>emb|AL512292.5| Human DNA sequence from clone RP11-292O17 on chromosome 1 Contains a ribosomal protein L31 (RPL31) pseudogene, complete sequence Length = 135389 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 taaaatagcatatatataca 148 |||||||||||||||||||| Sbjct: 35251 taaaatagcatatatataca 35270
>emb|AL442063.8| Human DNA sequence from clone RP11-8N6 on chromosome 9 Contains the 3' end of the MELK gene for maternal embryonic leucine zipper kinase (KIAA0175), complete sequence Length = 141833 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ttgtttctcttattataaac 280 |||||||||||||||||||| Sbjct: 74097 ttgtttctcttattataaac 74078
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gcgaatcagcacgaaactac 91 |||||||||||||||||||| Sbjct: 1569931 gcgaatcagcacgaaactac 1569912
>emb|AL360093.11| Human DNA sequence from clone RP11-135J2 on chromosome 1 Contains the LYPLAL1 gene for lysophospholipase-like protein 1, a novel pseudogene (KIAA1238) and a novel transcript, complete sequence Length = 141156 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tcttattataaactgacaaa 287 |||||||||||||||||||| Sbjct: 58576 tcttattataaactgacaaa 58557
>gb|BT010077.1| Drosophila melanogaster LD09801 full insert cDNA Length = 4357 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 2804 ccgcctgctgctgctgctgc 2785
>gb|BT010038.1| Drosophila melanogaster LD44321 full insert cDNA Length = 3782 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 1364 ccgcctgctgctgctgctgc 1345
>emb|AL139243.11| Human DNA sequence from clone RP11-439D8 on chromosome 10 Contains a novel gene, the HPS1 gene for Hermansky-Pudlak syndrome 1, the 3' end of the HPSE2 gene for heparanase 2 and a CpG island, complete sequence Length = 143463 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 103985 gcctgctgctgctgctgccc 103966
>emb|AL022327.17|HS355C18 Human DNA sequence from clone RP3-355C18 on chromosome 22q13.3 Contains the KIAA0027 gene, ESTs, STSs, GSSs and seven putative CpG islands, complete sequence Length = 101270 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 ccggggggcagcggcgtggg 433 |||||||||||||||||||| Sbjct: 71592 ccggggggcagcggcgtggg 71573
>emb|CR753845.11| Human DNA sequence from clone DADB-112B14 on chromosome 6, complete sequence Length = 96090 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 77196 gcctgctgctgctgctgccc 77215 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 50829 gcctgctgctgctgctgccc 50848
>emb|BX071366.1|CNS09R8A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC8DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 851 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 668 ccgcctgctgctgctgctgc 687
>emb|BX071365.1|CNS09R89 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC8DE04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 827 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 670 ccgcctgctgctgctgctgc 651
>emb|BX065141.1|CNS09MFD Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC48DF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 872 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 690 ccgcctgctgctgctgctgc 709
>emb|BX065140.1|CNS09MFC Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC48DF04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 919 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 698 ccgcctgctgctgctgctgc 679
>emb|BX052285.1|CNS09CI9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC3BC05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 617 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 515 ccgcctgctgctgctgctgc 496
>emb|BX047862.1|CNS0993E Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC22CE11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 749 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 664 ccgcctgctgctgctgctgc 645
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 1068383 ccgcctgctgctgctgctgc 1068402
>emb|X58906.1|HSCYP216 H.sapiens CYP21 gene for steroid 21-monooxygenase Length = 2771 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 66 gcctgctgctgctgctgccc 85
>gb|DQ116758.1| Nasonia vitripennis hunchback (hb) gene, exons 3 through 5 and partial cds, alternatively spliced Length = 3102 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 191 ccgcctgctgctgctgctgc 172
>gb|DQ116757.1| Nasonia vitripennis hunchback splice variant B (hb) mRNA, complete cds, alternatively spliced Length = 2696 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 291 ccgcctgctgctgctgctgc 272
>gb|DQ116756.1| Nasonia vitripennis hunchback splice variant A (hb) mRNA, complete cds, alternatively spliced Length = 2899 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 494 ccgcctgctgctgctgctgc 475
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 2625830 gcctgctgctgctgctgccc 2625849
>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216116 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 tccgcctgctgctgctgctg 398 |||||||||||||||||||| Sbjct: 80970 tccgcctgctgctgctgctg 80989
>gb|BC070040.1| Homo sapiens solute carrier family 6, member 15, transcript variant 1, mRNA (cDNA clone MGC:87066 IMAGE:30341047), complete cds Length = 3649 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 212 ctgctgctgctgctgcccgg 231
>gb|BC044590.1| Homo sapiens ARP3 actin-related protein 3 homolog (yeast), mRNA (cDNA clone MGC:57216 IMAGE:5261640), complete cds Length = 2728 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 311 cgcctgctgctgctgctgcc 292
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgcccgg 403 |||||||||||||| ||||||||| Sbjct: 168341 ccgcctgctgctgcggctgcccgg 168318
>gb|AC133930.4| Oryza sativa chromosome 3 BAC OSJNBa0039O18 genomic sequence, complete sequence Length = 139187 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 121714 ccgcctgctgctgctgctgc 121695
>gb|BC055737.1| Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5, mRNA (cDNA clone MGC:67025 IMAGE:6415191), complete cds Length = 2026 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 338 ccgcctgctgctgctgctgc 319
>emb|AL645922.11| Human DNA sequence from clone XXbac-116M5 on chromosome 6 contains the C2 gene for complement component 2 (C2, CO2), the Bf gene for B-factor, properdin (Bf, GBG, CFAB, PBF2), the RDBP gene for RD RNA-binding protein (RDBP, RD, RDP, D6S45, NELF-E), the SKIV2L gene for superkiller viralicidic activity 2-like (S. cerevisiae) (SKIV2L, HLP, SKI2, DDX13, SKI2W, SKIV2), the DOM3Z gene for dom-3 homolog Z (C. elegans) (DOM3Z, NG6, DOM3L), the STK19 gene for serine/threonine kinase 19 (STK19, G11, RP1, D6S60, D6S60E, HLA-RP1), the C4A gene for complement component 4A (C4A, C4S, CO4), a cytochrome P450, subfamily XXIA (steroid 21-hydroxylase), polypeptide 1 pseudogene (CYP21A1P), a tenascin XA pseudogene (TNXA, XA, XB, TNX, HXBL, D6S103E), a serine/threonine kinase 19 (STK19, G11, RP1, D6S60, D6S60E, HLA-RP1) pseudogene, the C4B gene for complement component 4B (C4B, C4F, CO4), the CYP21A2 gene for cytochrome P450, subfamily XXIA (steroid 21-hydroxylase, congenital adrenal hyperplasia), polypeptide 2 (CYP21A2, CAH1, CPS1, CA21H, CYP21, CYP21B, P450c21B), the 3' end of the TNXB gene for tenascin XB (TNXB, XB, TNX, XBS, HXBL, TENX, TNXB1, TNXB2, TNXBS) and four CpG islands, complete sequence Length = 180559 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 134702 gcctgctgctgctgctgccc 134721 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 101967 gcctgctgctgctgctgccc 101986
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 102031 ccgcctgctgctgctgctgc 102050
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 49141 cgcctgctgctgctgctgcc 49122
>emb|AL049547.10|HSDJ34F7 Human DNA sequence from clone RP1-34F7 on chromosome 6p21.2-21.33 Contains the 3' end of the gene for CREB-RP (G13), the gene for tenascin XB and XA, the CYP21A2 gene for cytochrome P450, subfamily XXIA (steroid 21-hydroxylase), polypeptide 2 (CYP21, P450c21B), the C4A gene for complement component 4A, the gene for RP MHC class III complement protein (G11), the DOM3Z gene for DOM-3 (C. elegans) homolog Z, the SKIV2L gene for superkiller viralicidic activity 2 (S. cerevisiae homolog)-like (SKI2W) and the gene for RD (RDBP). Contains ESTs, STSs, GSSs and five putative CpG islands, complete sequence Length = 129811 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 86647 gcctgctgctgctgctgccc 86628
>emb|AL035245.1|DMBH61I5 Drosophila melanogaster BAC clone BACH61I5 Length = 29358 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 24164 ccgcctgctgctgctgctgc 24145
>emb|AJ414151.1| Yersinia pestis strain CO92 complete genome; segment 11/20 Length = 334050 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 323273 gcctgctgctgctgctgccc 323292
>emb|AJ251829.1|SSC251829 Sus scrofa MHC class I SLA genomic region, haplotype H01, clone BAC 207G8 Length = 152211 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 atatatatacacaggagttc 157 |||||||||||||||||||| Sbjct: 134110 atatatatacacaggagttc 134091
>emb|AJ238216.2|GGA238216 Gallus gallus mRNA for supporting-cell antigen Length = 5515 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cctgctgctgctgctgcccg 402 |||||||||||||||||||| Sbjct: 76 cctgctgctgctgctgcccg 95
>gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167071 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 108027 ctgctgctgctgctgcccgg 108046
>emb|AJ719496.1| Gallus gallus mRNA for hypothetical protein, clone 2n14 Length = 5430 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 1084 cgcctgctgctgctgctgcc 1103
>emb|CR925987.1| Pongo pygmaeus mRNA; cDNA DKFZp459E0220 (from clone DKFZp459E0220) Length = 2648 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 233 cgcctgctgctgctgctgcc 214
>emb|AL671256.1|TBN19B2 Trypanosoma brucei VO2 VSG expression site BAC Length = 137759 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 24204 ccgcctgctgctgctgctgc 24223
>emb|CR859690.1| Pongo pygmaeus mRNA; cDNA DKFZp468G058 (from clone DKFZp468G058) Length = 2701 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 285 cgcctgctgctgctgctgcc 266
>ref|NM_204621.1| Gallus gallus protein tyrosine phosphatase, receptor type, J (PTPRJ), mRNA Length = 5515 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 cctgctgctgctgctgcccg 402 |||||||||||||||||||| Sbjct: 76 cctgctgctgctgctgcccg 95
>emb|CR361558.6| Zebrafish DNA sequence from clone DKEY-22K11 in linkage group 13, complete sequence Length = 204631 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 183202 ctgctgctgctgctgcccgg 183221
>gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60001 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 1343 ctgctgctgctgctgcccgg 1324
>gb|AC018922.22| Homo sapiens 12 BAC RP11-485C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166256 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 165292 ctgctgctgctgctgcccgg 165273
>emb|BX296538.9| Zebrafish DNA sequence from clone DKEY-275P19 in linkage group 25, complete sequence Length = 192787 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 gcttgcccgtggccatggcc 470 |||||||||||||||||||| Sbjct: 49603 gcttgcccgtggccatggcc 49622
>dbj|AB244213.1| Xenopus tropicalis mRNA for thyroid hormone receptor alpha, complete cds Length = 1936 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 41 ctgctgctgctgctgcccgg 22
>dbj|AP003791.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065G12 Length = 165006 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 17603 ccgcctgctgctgctgctgc 17622
>emb|X99897.1|HSPQCCA1 H.sapiens mRNA for P/Q-type calcium channel alpha1 subunit Length = 7446 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 7249 ccgcctgctgctgctgctgc 7230
>ref|NM_021828.3| Homo sapiens heparanase 2 (HPSE2), mRNA Length = 2293 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 2215 gcctgctgctgctgctgccc 2234
>gb|AC010067.7| Drosophila melanogaster 3L BAC RP98-10I10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179856 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 14401 ccgcctgctgctgctgctgc 14382
>gb|AC091211.3| Drosophila melanogaster 3L BAC RP98-26E12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194589 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 172430 ccgcctgctgctgctgctgc 172449
>gb|AC091228.3| Drosophila melanogaster 3L BAC RP98-10L9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 156142 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 71955 ccgcctgctgctgctgctgc 71936
>gb|AC010047.8| Drosophila melanogaster 3L BAC RP98-28E17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164201 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 18853 ccgcctgctgctgctgctgc 18872
>dbj|AK094037.1| Homo sapiens cDNA FLJ36718 fis, clone UTERU2010747, highly similar to Homo sapiens heparanase-like protein HPA2b mRNA Length = 2064 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 1986 gcctgctgctgctgctgccc 2005
>gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169618 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 108442 ccgcctgctgctgctgctgc 108423
>tpg|BK003327.1| TPA: TPA_inf: Drosophila melanogaster HDC00979 (HDC00979) gene, complete cds Length = 330 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 174 ccgcctgctgctgctgctgc 155
>dbj|AK054616.1| Homo sapiens cDNA FLJ30054 fis, clone ADRGL1000160, highly similar to CYTOCHROME P450 XXIB (EC 1.14.99.10) Length = 1915 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 23 gcctgctgctgctgctgccc 42
>dbj|AK022853.1| Homo sapiens cDNA FLJ12791 fis, clone NT2RP2001991, highly similar to SODIUM- AND CHLORIDE-DEPENDENT TRANSPORTER NTT73 Length = 2657 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 ctgctgctgctgctgcccgg 403 |||||||||||||||||||| Sbjct: 180 ctgctgctgctgctgcccgg 199
>ref|NM_206286.1| Drosophila melanogaster CG10107-RC, transcript variant C (CG10107), mRNA Length = 5867 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 1788 ccgcctgctgctgctgctgc 1769
>ref|NM_168038.1| Drosophila melanogaster CG32264-RD, transcript variant D (CG32264), mRNA Length = 3801 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 1358 ccgcctgctgctgctgctgc 1339
>ref|NM_166077.1| Drosophila melanogaster CG12424-RC, transcript variant C (CG12424), mRNA Length = 4335 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 2804 ccgcctgctgctgctgctgc 2785
>ref|NM_166076.1| Drosophila melanogaster CG12424-RB, transcript variant B (CG12424), mRNA Length = 4043 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 2512 ccgcctgctgctgctgctgc 2493
>ref|NM_139799.3| Drosophila melanogaster CG10107-RA, transcript variant A (CG10107), mRNA Length = 5852 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 1773 ccgcctgctgctgctgctgc 1754
>ref|NM_137165.1| Drosophila melanogaster CG12424-RA, transcript variant A (CG12424), mRNA Length = 3832 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 2301 ccgcctgctgctgctgctgc 2282
>ref|NM_001038734.1| Drosophila melanogaster Hr4 CG16902-RC (Hr4), mRNA Length = 6112 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 3106 ccgcctgctgctgctgctgc 3087
>ref|NM_005721.3| Homo sapiens ARP3 actin-related protein 3 homolog (yeast) (ACTR3), mRNA Length = 2728 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 311 cgcctgctgctgctgctgcc 292
>gb|AC093669.4| Homo sapiens BAC clone RP11-540E16 from 4, complete sequence Length = 96120 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 agaacgtgatgaggcttgca 333 |||||||||||||||||||| Sbjct: 10708 agaacgtgatgaggcttgca 10727
>ref|NM_000500.5| Homo sapiens cytochrome P450, family 21, subfamily A, polypeptide 2 (CYP21A2), mRNA Length = 2114 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 132 gcctgctgctgctgctgccc 151
>gb|AY046896.1| Trypanosoma brucei clone Cos-12 RHS1 pseudogene, non-LTR retrotransposon RIME, and non-LTR retrotransposon ingi, complete sequence Length = 8670 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 419 ccgcctgctgctgctgctgc 438
>gb|AY046893.1| Trypanosoma brucei clone Cos-02 RHS1 (RHS1) gene, complete cds Length = 2667 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 134 ccgcctgctgctgctgctgc 153
>gb|M12793.1|HUMMHCP41 Homo sapiens CYP21P gene, exons 2 through 10 and CYP21P pseudogenes, complete sequence Length = 5147 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 1696 gcctgctgctgctgctgccc 1715
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 65836 ccgcctgctgctgctgctgc 65855
>ref|NG_004658.1| Homo sapiens MHC class III complement gene cluster, bimodular haplotype (MCGC2@) on chromosome 6 Length = 201523 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 111220 gcctgctgctgctgctgccc 111239 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 78485 gcctgctgctgctgctgccc 78504
>gb|AF004884.1|AF004884 Homo sapiens neuronal calcium channel alpha 1A subunit isoform A-1 mRNA, complete cds Length = 7808 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 7227 ccgcctgctgctgctgctgc 7208
>gb|AF004883.1|AF004883 Homo sapiens neuronal calcium channel alpha 1A subunit isoform 1A-2 mRNA, complete cds Length = 7791 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 7210 ccgcctgctgctgctgctgc 7191
>gb|BC113308.1| Bos taurus cDNA clone MGC:138100 IMAGE:8089033, complete cds Length = 1951 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 610 ccgcctgctgctgctgctgc 591
>gb|AY971884.1| Drosophila melanogaster hormone receptor 4 (Hr4) mRNA, complete cds Length = 6113 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 3106 ccgcctgctgctgctgctgc 3087
>gb|AC007419.7| Drosophila melanogaster, chromosome 2L, region 25E-25F, BAC clone BACR07G15, complete sequence Length = 190668 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 39617 ccgcctgctgctgctgctgc 39636
>gb|AC092399.2| Drosophila melanogaster, chromosome 2L, region 36B-36C, BAC clone BACR31N11, complete sequence Length = 122013 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 gtagacatccgcctgctgctgctgctgc 399 |||| |||| |||||||||||||||||| Sbjct: 74128 gtaggcatctgcctgctgctgctgctgc 74101
>dbj|AK042683.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730015D19 product:sialyltransferase 7 ((alpha-N-acetylneuraminyl 2,3-betagalactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) E, full insert sequence Length = 1704 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 378 ccgcctgctgctgctgctgc 359
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 375159 ccgcctgctgctgctgctgc 375178
>ref|NG_005163.1| Homo sapiens MHC class III complement gene cluster, monomodular haplotype (MCGC3@) on chromosome 6 Length = 164376 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 72115 gcctgctgctgctgctgccc 72134
>dbj|AK028975.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732477A13 product:unclassifiable, full insert sequence Length = 2635 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 119 ccgcctgctgctgctgctgc 138
>dbj|AK038434.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230010I09 product:sialyltransferase 7 ((alpha-N-acetylneuraminyl 2,3-betagalactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) E, full insert sequence Length = 2007 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 342 ccgcctgctgctgctgctgc 323
>dbj|AK041785.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630037N20 product:hypothetical protein, full insert sequence Length = 2373 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 219 ccgcctgctgctgctgctgc 238
>dbj|AK034387.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330185J01 product:sialyltransferase 7 ((alpha-N-acetylneuraminyl 2,3-betagalactosyl-1,3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) E, full insert sequence Length = 2827 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 342 ccgcctgctgctgctgctgc 323
>gb|AC011446.6|AC011446 Homo sapiens chromosome 19 clone CTC-250I14, complete sequence Length = 115932 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 78812 ccgcctgctgctgctgctgc 78831
>emb|AL935033.5| Zebrafish DNA sequence from clone CH211-160F23 in linkage group 17, complete sequence Length = 162648 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 tgtttctcttattataaact 281 |||||||||||||||||||| Sbjct: 36582 tgtttctcttattataaact 36563
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 30415763 cgcctgctgctgctgctgcc 30415744 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 27833359 ccgcctgctgctgctgctgc 27833378
>gb|AF350262.1|AF350262 Argiope aurantia major ampullate spidroin 1 (MaSp1) gene, partial cds Length = 1344 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 178 ccgcctgctgctgctgctgc 159
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 1068383 ccgcctgctgctgctgctgc 1068402
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 20328719 ccgcctgctgctgctgctgc 20328700 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 383 cctgctgctgctgctgcccgggcggcgc 410 ||||||||||||||||||| ||| |||| Sbjct: 4020527 cctgctgctgctgctgccccggctgcgc 4020500
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 21760814 ccgcctgctgctgctgctgc 21760795
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tgcccgtggccatggccgtg 473 |||||||||||||||||||| Sbjct: 21477746 tgcccgtggccatggccgtg 21477727
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 39215897 ccgcctgctgctgctgctgc 39215916
>emb|BX679671.7| Human DNA sequence from clone DASS-307J8 on chromosome 6, complete sequence Length = 96335 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 33593 gcctgctgctgctgctgccc 33612
>emb|BX936373.1| Human DNA sequence from clone DASS-307J8 on chromosome 6, complete sequence Length = 36539 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 382 gcctgctgctgctgctgccc 401 |||||||||||||||||||| Sbjct: 33593 gcctgctgctgctgctgccc 33612
>gb|AC068616.5| Homo sapiens BAC clone RP11-580J2 from 2, complete sequence Length = 152573 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aaatagcatatatatacaca 150 |||||||||||||||||||| Sbjct: 143832 aaatagcatatatatacaca 143851
>ref|NM_175804.2| Bos taurus nuclear receptor subfamily 2, group F, member 1 (NR2F1), mRNA Length = 2205 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 244 ccgcctgctgctgctgctgc 225
>gb|U57899.1|ZMU57899 Zea mays repressor-like protein (in1) gene, complete cds Length = 8291 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 762 ccgcctgctgctgctgctgc 743
>gb|AC110769.2| Homo sapiens BAC clone RP11-141B14 from 2, complete sequence Length = 135317 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 26770 cgcctgctgctgctgctgcc 26751
>ref|NM_012028.2| Mus musculus ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1, 3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 (St6galnac5), mRNA Length = 2827 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 342 ccgcctgctgctgctgctgc 323
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 454 tgcccgtggccatggccgtgtcca 477 ||||||||||||||| |||||||| Sbjct: 1327788 tgcccgtggccatggacgtgtcca 1327811
>dbj|AP003313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0035F12 Length = 153439 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 91657 ccgcctgctgctgctgctgc 91676
>ref|NM_001007350.1| Danio rerio zgc:103470 (zgc:103470), mRNA Length = 1351 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gcttgcccgtggccatggcc 470 |||||||||||||||||||| Sbjct: 709 gcttgcccgtggccatggcc 690
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 77997 ccgcctgctgctgctgctgc 77978
>dbj|AP005738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0066C12 Length = 168874 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 383 cctgctgctgctgctgcccgggcggcgc 410 ||||||||||||||||||| ||| |||| Sbjct: 4008 cctgctgctgctgctgccccggctgcgc 3981
>dbj|AK201606.1| Mus musculus cDNA, clone:Y1G0138M10, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000057343, based on BLAT search Length = 323 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 300 ccgcctgctgctgctgctgc 319
>dbj|AP005458.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0567G03 Length = 196834 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tgcccgtggccatggccgtg 473 |||||||||||||||||||| Sbjct: 34930 tgcccgtggccatggccgtg 34911
>dbj|AP005456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0513E02 Length = 141477 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 454 tgcccgtggccatggccgtg 473 |||||||||||||||||||| Sbjct: 112246 tgcccgtggccatggccgtg 112227
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 107846 ccgcctgctgctgctgctgc 107827
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 383 cctgctgctgctgctgcccgggcggcgc 410 ||||||||||||||||||| ||| |||| Sbjct: 152039 cctgctgctgctgctgccccggctgcgc 152012
>emb|AJ515320.1|NKU515320 Nepeta kurdica 5.8S rRNA gene, ITS1 and ITS2 Length = 759 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 398 gcccgggcggcgcgtgccgggggg 421 ||||||||||||||| |||||||| Sbjct: 203 gcccgggcggcgcgtcccgggggg 180
>dbj|AK121038.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051E10, full insert sequence Length = 2259 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 138 ccgcctgctgctgctgctgc 119
>ref|XM_552232.1| Anopheles gambiae str. PEST ENSANGP00000027837 (ENSANGG00000025096), partial mRNA Length = 3399 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 360 cgcctgctgctgctgctgcc 341
>ref|XM_552190.1| Anopheles gambiae str. PEST ENSANGP00000025878 (ENSANGG00000013288), mRNA Length = 1430 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 693 ccgcctgctgctgctgctgc 674
>dbj|AK111219.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B10, full insert sequence Length = 2621 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 887 ccgcctgctgctgctgctgc 868
>dbj|AK110546.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-B09, full insert sequence Length = 1197 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 396 ccgcctgctgctgctgctgc 377
>ref|XM_311352.2| Anopheles gambiae str. PEST ENSANGP00000021326 (ENSANGG00000018837), partial mRNA Length = 1137 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 tccgcctgctgctgctgctg 398 |||||||||||||||||||| Sbjct: 364 tccgcctgctgctgctgctg 345
>dbj|AK110059.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-D08, full insert sequence Length = 3071 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 1406 cgcctgctgctgctgctgcc 1387
>gb|AC004492.1|AC004492 Homo sapiens BAC clone CTA-363E19 from 7q31.1, complete sequence Length = 165608 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 aaattacacatgatatataa 27 |||||||||||||||||||| Sbjct: 127327 aaattacacatgatatataa 127346
>dbj|AK101205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030O21, full insert sequence Length = 2925 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 ccgcctgctgctgctgctgc 399 |||||||||||||||||||| Sbjct: 2566 ccgcctgctgctgctgctgc 2547
>gb|AF006083.1|AF006083 Homo sapiens actin-related protein Arp3 (ARP3) mRNA, complete cds Length = 2146 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgcctgctgctgctgctgcc 400 |||||||||||||||||||| Sbjct: 163 cgcctgctgctgctgctgcc 144 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,975,015 Number of Sequences: 3902068 Number of extensions: 4975015 Number of successful extensions: 343269 Number of sequences better than 10.0: 309 Number of HSP's better than 10.0 without gapping: 320 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 337894 Number of HSP's gapped (non-prelim): 5368 length of query: 521 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 498 effective length of database: 17,143,297,704 effective search space: 8537362256592 effective search space used: 8537362256592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
