Clone Name | rbart25f01 |
---|---|
Clone Library Name | barley_pub |
>PXL1_YEAST (P36166) Paxillin-like protein 1| Length = 706 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/69 (28%), Positives = 32/69 (46%) Frame = -2 Query: 454 SSIKKPANMPFLNDSGKRKSPGFLSDKPIHKKQKHERPSEGRRFVGDGSSVGTPFVRNNV 275 S I N L S ++KSPG S + + +E R + +V TP+ N+ Sbjct: 311 SKIYPDDNFSGLESSKEQKSPGVSSSSTKVEDLSLDGLNEKRLSITSSENVETPYTATNL 370 Query: 274 KQKQSIAEL 248 + +Q IA+L Sbjct: 371 QVEQLIAQL 379
>IF2_UREPA (Q9PQH1) Translation initiation factor IF-2| Length = 614 Score = 30.0 bits (66), Expect = 2.9 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 3/66 (4%) Frame = -2 Query: 385 LSDKPIHKKQKHERPSEGRRFVGDGSSVGTPFVRNNVKQKQSIAELAALAGKD---KLTA 215 L KP+ E P+ G +F+ + N+VKQK+ E A L D K+ Sbjct: 347 LPSKPVKVSGFEEVPTAGDKFLALADEKQARAIANDVKQKKMRLERAMLQSSDIRTKIAN 406 Query: 214 GEVRKL 197 GE++ + Sbjct: 407 GELKNI 412
>PROB_GEOKA (Q5KYA3) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 374 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/42 (38%), Positives = 23/42 (54%) Frame = -2 Query: 319 GDGSSVGTPFVRNNVKQKQSIAELAALAGKDKLTAGEVRKLL 194 GDG+ +G PF + +KQ IA A +AG + +G LL Sbjct: 249 GDGTYIGVPFPKQMQMRKQWIAYHAPVAGMITVDSGAEEALL 290
>IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 828 Score = 29.6 bits (65), Expect = 3.8 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 7/42 (16%) Frame = +2 Query: 74 YQQKPSP*SAW-----FARNGSPFLQVLP--KKKRDGLGSLG 178 Y++KPS +++ FAR SP LQ+LP + DGLG G Sbjct: 259 YEKKPSQTASYERLDVFARPASPSLQLLPWRESSLDGLGGTG 300
>ATS9_HUMAN (Q9P2N4) ADAMTS-9 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 9) (ADAM-TS 9) (ADAM-TS9) Length = 1935 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = -1 Query: 350 RETLRGQAVCRGWQQCWHTVCQEQCQAETVHRRACC 243 RE G+ GW+ T C + C T RRA C Sbjct: 989 REKCSGECNTGGWRYSAWTECSKSCDGGTQRRRAIC 1024
>PHOSP_RINDR (Q03335) Phosphoprotein (Protein P)| Length = 507 Score = 29.6 bits (65), Expect = 3.8 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Frame = -2 Query: 448 IKKPANMPFLNDSGKR--KSPGFLSD----KPIHKKQKHERPSEGRRFVGDGSSVGTPFV 287 +KKPA+ D+GK +S G L KPI KK S RFV DGS + Sbjct: 410 LKKPASERQSKDTGKLGIESKGLLKKEFQLKPIEKKS-----SSAIRFVPDGSVASRSVI 464 Query: 286 RNNVK 272 R+ +K Sbjct: 465 RSIIK 469
>PHOSP_RINDK (P35945) Phosphoprotein (Protein P)| Length = 507 Score = 29.6 bits (65), Expect = 3.8 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Frame = -2 Query: 448 IKKPANMPFLNDSGKR--KSPGFLSD----KPIHKKQKHERPSEGRRFVGDGSSVGTPFV 287 +KKPA+ D+GK +S G L KPI KK S RFV DGS + Sbjct: 410 LKKPASERQSKDTGKLGIESKGLLKKEFQLKPIEKKS-----SSAIRFVPDGSVASRSVI 464 Query: 286 RNNVK 272 R+ +K Sbjct: 465 RSIIK 469
>LAMA2_HUMAN (P24043) Laminin alpha-2 chain precursor (Laminin M chain) (Merosin| heavy chain) Length = 3110 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%) Frame = +3 Query: 279 LFLTNGVPTLLPSPTNRLPS-EGLSCFCFLWIGLSDRKPGDFLLPLSFKN 425 LF+ P PSP +P EG +W + + P DF P+SFKN Sbjct: 2660 LFVGGAPPEFQPSPLRNIPPFEGC-----IWNLVINSVPMDFARPVSFKN 2704
>CPB3_CAEJA (Q6E3D2) Cytoplasmic polyadenylation element-binding protein 3| Length = 734 Score = 28.9 bits (63), Expect = 6.4 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -2 Query: 439 PANMPFLNDSGKRKSPGFLSDKPIHKKQKHER 344 P+ S K+ S F S KPIH+KQ R Sbjct: 138 PSRFSVFGRSAKKVSESFSSQKPIHRKQSARR 169
>ZN434_HUMAN (Q9NX65) Zinc finger protein 434| Length = 485 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/88 (25%), Positives = 40/88 (45%) Frame = -1 Query: 413 QWQEEIARFPIGQTDPQETETRETLRGQAVCRGWQQCWHTVCQEQCQAETVHRRACCSGW 234 +++ EI + + D +E E + L+ ++ RG WH+ Q+ ++E RR C Sbjct: 202 EFKNEIKKENLKWDDSEEVEINKALQRKS--RGVY--WHSELQKGLESEPTSRRQC---- 253 Query: 233 *G*TDRRGGPEAAQAGNFSQGSLAHLSF 150 R P ++ SQ ++H SF Sbjct: 254 ------RNSPGESEEKTPSQEKMSHQSF 275
>CCG8_NEUCR (Q01306) Clock-controlled protein 8| Length = 661 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = -3 Query: 210 RSGSCSSRKFQPREPSPSLFFFGS 139 RS S SS +FQ REP+P F GS Sbjct: 132 RSRSPSSNRFQTREPAPLSLFDGS 155 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,937,760 Number of Sequences: 219361 Number of extensions: 1441423 Number of successful extensions: 3871 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3684 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3864 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)