ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart25e12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 238 bits (120), Expect = 1e-59 Identities = 219/252 (86%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 |||||||||||||||||| || || || |||||||||||| | |||| |||||||||| | Sbjct: 16679502 gcacttcttcctgatctcgccgtcggctccggtgagcacggcgacgttgcccatcttggt 16679443 Query: 251 catggacgcgctgaagtccttaaagaactcgccgtcgaacttgccggtggcgatgcgctg 310 ||||||| ||| ||||||| | ||||||||| |||||||||||||||||||||| ||||| Sbjct: 16679442 catggactcgccgaagtccctgaagaactcgtcgtcgaacttgccggtggcgatacgctg 16679383 Query: 311 gacgtagtctttggtggtggtgtccaagaggagcgcggagtcggagcggaagagtcccct 370 |||||| | ||||||||| ||| |||||||| || ||||||| |||||| ||||| Sbjct: 16679382 cacgtagcccctggtggtggcgtcggtgaggagcgaggcgtcggaggagaagagccccct 16679323 Query: 371 ccgtttggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccat 430 ||| |||||||| ||||||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 16679322 ccgcttggcgacatggcggtagtagctggtgtcgaacgtcttgtagctgccggggtccat 16679263 Query: 431 ctccgacagcat 442 ||||||| |||| Sbjct: 16679262 ctccgacggcat 16679251 Score = 172 bits (87), Expect = 7e-40 Identities = 204/243 (83%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 ||||||||||||||||||||| || | ||||||||||| |||| |||||||||| | Sbjct: 11403504 gcacttcttcctgatctctccttcctccccggtgagcacctggacgttgcccatcttggt 11403445 Query: 251 catggacgcgctgaagtccttaaagaactcgccgtcgaacttgccggtggcgatgcgctg 310 ||||||| ||| |||||| | ||||||||| |||||||||||||||||||||| ||| | Sbjct: 11403444 catggactcgccgaagtcgctgaagaactcggcgtcgaacttgccggtggcgatccgccg 11403385 Query: 311 gacgtagtctttggtggtggtgtccaagaggagcgcggagtcggagcggaagagtcccct 370 |||||||| ||||||||| ||| ||| |||| | ||||||| |||||| ||||| Sbjct: 11403384 cacgtagtccctggtggtggcgtcggtgagcagcgacgcgtcggaggagaagagccccct 11403325 Query: 371 ccgtttggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccat 430 ||| || ||||| ||||||||||||||||||||||| |||||| |||| || |||||||| Sbjct: 11403324 ccgcttcgcgacatggcggtagtagctggtgtcgaacgtcttgtagctgcccgggtccat 11403265 Query: 431 ctc 433 ||| Sbjct: 11403264 ctc 11403262
>dbj|AP003577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0664F03 Length = 184242 Score = 238 bits (120), Expect = 1e-59 Identities = 219/252 (86%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 |||||||||||||||||| || || || |||||||||||| | |||| |||||||||| | Sbjct: 30989 gcacttcttcctgatctcgccgtcggctccggtgagcacggcgacgttgcccatcttggt 30930 Query: 251 catggacgcgctgaagtccttaaagaactcgccgtcgaacttgccggtggcgatgcgctg 310 ||||||| ||| ||||||| | ||||||||| |||||||||||||||||||||| ||||| Sbjct: 30929 catggactcgccgaagtccctgaagaactcgtcgtcgaacttgccggtggcgatacgctg 30870 Query: 311 gacgtagtctttggtggtggtgtccaagaggagcgcggagtcggagcggaagagtcccct 370 |||||| | ||||||||| ||| |||||||| || ||||||| |||||| ||||| Sbjct: 30869 cacgtagcccctggtggtggcgtcggtgaggagcgaggcgtcggaggagaagagccccct 30810 Query: 371 ccgtttggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccat 430 ||| |||||||| ||||||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 30809 ccgcttggcgacatggcggtagtagctggtgtcgaacgtcttgtagctgccggggtccat 30750 Query: 431 ctccgacagcat 442 ||||||| |||| Sbjct: 30749 ctccgacggcat 30738
>tpe|BN000609.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx80 gene for class III peroxidase 80 precursor, exons 1-2 Length = 1149 Score = 238 bits (120), Expect = 1e-59 Identities = 219/252 (86%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 |||||||||||||||||| || || || |||||||||||| | |||| |||||||||| | Sbjct: 1134 gcacttcttcctgatctcgccgtcggctccggtgagcacggcgacgttgcccatcttggt 1075 Query: 251 catggacgcgctgaagtccttaaagaactcgccgtcgaacttgccggtggcgatgcgctg 310 ||||||| ||| ||||||| | ||||||||| |||||||||||||||||||||| ||||| Sbjct: 1074 catggactcgccgaagtccctgaagaactcgtcgtcgaacttgccggtggcgatacgctg 1015 Query: 311 gacgtagtctttggtggtggtgtccaagaggagcgcggagtcggagcggaagagtcccct 370 |||||| | ||||||||| ||| |||||||| || ||||||| |||||| ||||| Sbjct: 1014 cacgtagcccctggtggtggcgtcggtgaggagcgaggcgtcggaggagaagagccccct 955 Query: 371 ccgtttggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccat 430 ||| |||||||| ||||||||||||||||||||||| |||||| |||| ||||||||||| Sbjct: 954 ccgcttggcgacatggcggtagtagctggtgtcgaacgtcttgtagctgccggggtccat 895 Query: 431 ctccgacagcat 442 ||||||| |||| Sbjct: 894 ctccgacggcat 883
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 172 bits (87), Expect = 7e-40 Identities = 204/243 (83%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 ||||||||||||||||||||| || | ||||||||||| |||| |||||||||| | Sbjct: 91213 gcacttcttcctgatctctccttcctccccggtgagcacctggacgttgcccatcttggt 91154 Query: 251 catggacgcgctgaagtccttaaagaactcgccgtcgaacttgccggtggcgatgcgctg 310 ||||||| ||| |||||| | ||||||||| |||||||||||||||||||||| ||| | Sbjct: 91153 catggactcgccgaagtcgctgaagaactcggcgtcgaacttgccggtggcgatccgccg 91094 Query: 311 gacgtagtctttggtggtggtgtccaagaggagcgcggagtcggagcggaagagtcccct 370 |||||||| ||||||||| ||| ||| |||| | ||||||| |||||| ||||| Sbjct: 91093 cacgtagtccctggtggtggcgtcggtgagcagcgacgcgtcggaggagaagagccccct 91034 Query: 371 ccgtttggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccat 430 ||| || ||||| ||||||||||||||||||||||| |||||| |||| || |||||||| Sbjct: 91033 ccgcttcgcgacatggcggtagtagctggtgtcgaacgtcttgtagctgcccgggtccat 90974 Query: 431 ctc 433 ||| Sbjct: 90973 ctc 90971
>tpe|BN000607.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx78 gene for class III peroxidase 78 precursor, exons 1-2 Length = 1093 Score = 172 bits (87), Expect = 7e-40 Identities = 204/243 (83%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 ||||||||||||||||||||| || | ||||||||||| |||| |||||||||| | Sbjct: 1075 gcacttcttcctgatctctccttcctccccggtgagcacctggacgttgcccatcttggt 1016 Query: 251 catggacgcgctgaagtccttaaagaactcgccgtcgaacttgccggtggcgatgcgctg 310 ||||||| ||| |||||| | ||||||||| |||||||||||||||||||||| ||| | Sbjct: 1015 catggactcgccgaagtcgctgaagaactcggcgtcgaacttgccggtggcgatccgccg 956 Query: 311 gacgtagtctttggtggtggtgtccaagaggagcgcggagtcggagcggaagagtcccct 370 |||||||| ||||||||| ||| ||| |||| | ||||||| |||||| ||||| Sbjct: 955 cacgtagtccctggtggtggcgtcggtgagcagcgacgcgtcggaggagaagagccccct 896 Query: 371 ccgtttggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccat 430 ||| || ||||| ||||||||||||||||||||||| |||||| |||| || |||||||| Sbjct: 895 ccgcttcgcgacatggcggtagtagctggtgtcgaacgtcttgtagctgcccgggtccat 836 Query: 431 ctc 433 ||| Sbjct: 835 ctc 833
>gb|AY751451.1| Panicum virgatum cultivar Nebraska-28 genomic sequence Length = 382 Score = 73.8 bits (37), Expect = 5e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 358 ggaagagtcccctccgtttggcgacgtggcggtagtagctggtgtcgaaggtcttgaagc 417 ||||||| ||||| || |||| ||||||| |||||||||| ||||||||||||||||| Sbjct: 249 ggaagaggcccctgcgcctggccacgtggccgtagtagctgaggtcgaaggtcttgaagc 190 Query: 418 taccggggtccatctcc 434 | || |||||||||||| Sbjct: 189 tgcccgggtccatctcc 173
>gb|AY751450.1| Cynodon dactylon var. aridus cultivar Midlawn genomic sequence Length = 498 Score = 73.8 bits (37), Expect = 5e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 366 cccctccgtttggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccgggg 425 |||||||| ||||||||||||| ||||||| | |||||||||||||||||| || ||| Sbjct: 370 cccctccgcttggcgacgtggccgtagtagttcaggtcgaaggtcttgaagctgcccggg 311 Query: 426 tccatctcc 434 ||||||||| Sbjct: 310 tccatctcc 302
>gb|AC125783.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0039K08, complete sequence Length = 122163 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttga 249 |||||||||||||||||| || || |||||||||||||||| ||| |||||||||||| Sbjct: 17984 gcacttcttcctgatctcgccttcgccgccggtgagcacgccgacgccgcccatcttga 17926 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 387 cggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctccgacagc 440 |||||||||| || ||||||||| |||||| |||||||||||||||| |||| Sbjct: 17788 cggtagtagccggcgtcgaaggtgaggaagctcccggggtccatctccgccagc 17735
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttga 249 |||||||||||||||||| || || |||||||||||||||| ||| |||||||||||| Sbjct: 25705641 gcacttcttcctgatctcgccttcgccgccggtgagcacgccgacgccgcccatcttga 25705583 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 387 cggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctccgacagc 440 |||||||||| || ||||||||| |||||| |||||||||||||||| |||| Sbjct: 25705445 cggtagtagccggcgtcgaaggtgaggaagctcccggggtccatctccgccagc 25705392 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||||| ||| |||||||||| ||||| Sbjct: 5622768 gcgccggtgagcacgccgacgctccccatcttgaccatgg 5622807
>dbj|AK108713.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-B05, full insert sequence Length = 1346 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttga 249 |||||||||||||||||| || || |||||||||||||||| ||| |||||||||||| Sbjct: 1088 gcacttcttcctgatctcgccttcgccgccggtgagcacgccgacgccgcccatcttga 1030 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 387 cggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctccgacagc 440 |||||||||| || ||||||||| |||||| |||||||||||||||| |||| Sbjct: 892 cggtagtagccggcgtcgaaggtgaggaagctcccggggtccatctccgccagc 839
>tpe|BN000663.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx134 gene for class III peroxidase 134 precursor, exons 1-2 Length = 1524 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttga 249 |||||||||||||||||| || || |||||||||||||||| ||| |||||||||||| Sbjct: 1509 gcacttcttcctgatctcgccttcgccgccggtgagcacgccgacgccgcccatcttga 1451 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 387 cggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctccgacagc 440 |||||||||| || ||||||||| |||||| |||||||||||||||| |||| Sbjct: 1313 cggtagtagccggcgtcgaaggtgaggaagctcccggggtccatctccgccagc 1260
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/59 (89%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttga 249 |||||||||||||||||| || || |||||||||||||||| ||| |||||||||||| Sbjct: 26024311 gcacttcttcctgatctcgccttcgccgccggtgagcacgccgacgccgcccatcttga 26024253 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 387 cggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctccgacagc 440 |||||||||| || ||||||||| |||||| |||||||||||||||| |||| Sbjct: 26024115 cggtagtagccggcgtcgaaggtgaggaagctcccggggtccatctccgccagc 26024062 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||||| ||| |||||||||| ||||| Sbjct: 5689245 gcgccggtgagcacgccgacgctccccatcttgaccatgg 5689284
>ref|XM_476365.1| Oryza sativa (japonica cultivar-group), mRNA Length = 744 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 342 agcgcggagtcggagcggaagagtcccctccgtttggcgacgtggcggtagtagctggtg 401 ||||||||||||||| |||||| || | || ||||| || | ||||||||||||| | Sbjct: 350 agcgcggagtcggagtggaagatgccgcggcgcttggccaccagccggtagtagctggcg 291 Query: 402 tcgaaggtcttgaagctaccggggtccatctccgacag 439 |||||||| |||||| |||||||||||||||||||| Sbjct: 290 tcgaaggtgaggaagctgccggggtccatctccgacag 253 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 185 ggcgtggcacttcttcctgatctctccctcagcgccggtgagcacg 230 ||||| |||||| ||||||||||| |||| || |||||||||||| Sbjct: 507 ggcgtagcacttgttcctgatctcgccctgcgccccggtgagcacg 462
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 342 agcgcggagtcggagcggaagagtcccctccgtttggcgacgtggcggtagtagctggtg 401 ||||||||||||||| |||||| || | || ||||| || | ||||||||||||| | Sbjct: 235935 agcgcggagtcggagtggaagatgccgcggcgcttggccaccagccggtagtagctggcg 235876 Query: 402 tcgaaggtcttgaagctaccggggtccatctccgacag 439 |||||||| |||||| |||||||||||||||||||| Sbjct: 235875 tcgaaggtgaggaagctgccggggtccatctccgacag 235838 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 391 agtagctggtgtcgaaggtcttgaagctaccggggtccatctccg 435 |||||||| ||||||| || ||||||| |||||||||||||||| Sbjct: 252646 agtagctgctgtcgaacctcgtgaagctcccggggtccatctccg 252602 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 185 ggcgtggcacttcttcctgatctctccctcagcgccggtgagcacg 230 ||||| |||||| ||||||||||| |||| || |||||||||||| Sbjct: 236092 ggcgtagcacttgttcctgatctcgccctgcgccccggtgagcacg 236047
>dbj|AP005187.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0446F04 Length = 175390 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 342 agcgcggagtcggagcggaagagtcccctccgtttggcgacgtggcggtagtagctggtg 401 ||||||||||||||| |||||| || | || ||||| || | ||||||||||||| | Sbjct: 70799 agcgcggagtcggagtggaagatgccgcggcgcttggccaccagccggtagtagctggcg 70740 Query: 402 tcgaaggtcttgaagctaccggggtccatctccgacag 439 |||||||| |||||| |||||||||||||||||||| Sbjct: 70739 tcgaaggtgaggaagctgccggggtccatctccgacag 70702 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 391 agtagctggtgtcgaaggtcttgaagctaccggggtccatctccg 435 |||||||| ||||||| || ||||||| |||||||||||||||| Sbjct: 87510 agtagctgctgtcgaacctcgtgaagctcccggggtccatctccg 87466 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 185 ggcgtggcacttcttcctgatctctccctcagcgccggtgagcacg 230 ||||| |||||| ||||||||||| |||| || |||||||||||| Sbjct: 70956 ggcgtagcacttgttcctgatctcgccctgcgccccggtgagcacg 70911
>dbj|AK107894.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-E12, full insert sequence Length = 744 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 342 agcgcggagtcggagcggaagagtcccctccgtttggcgacgtggcggtagtagctggtg 401 ||||||||||||||| |||||| || | || ||||| || | ||||||||||||| | Sbjct: 350 agcgcggagtcggagtggaagatgccgcggcgcttggccaccagccggtagtagctggcg 291 Query: 402 tcgaaggtcttgaagctaccggggtccatctccgacag 439 |||||||| |||||| |||||||||||||||||||| Sbjct: 290 tcgaaggtgaggaagctgccggggtccatctccgacag 253 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 185 ggcgtggcacttcttcctgatctctccctcagcgccggtgagcacg 230 ||||| |||||| ||||||||||| |||| || |||||||||||| Sbjct: 507 ggcgtagcacttgttcctgatctcgccctgcgccccggtgagcacg 462
>tpe|BN000626.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx97 gene for class III peroxidase 97 precursor, exons 1-2 Length = 1107 Score = 67.9 bits (34), Expect = 3e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 342 agcgcggagtcggagcggaagagtcccctccgtttggcgacgtggcggtagtagctggtg 401 ||||||||||||||| |||||| || | || ||||| || | ||||||||||||| | Sbjct: 938 agcgcggagtcggagtggaagatgccgcggcgcttggccaccagccggtagtagctggcg 879 Query: 402 tcgaaggtcttgaagctaccggggtccatctccgacag 439 |||||||| |||||| |||||||||||||||||||| Sbjct: 878 tcgaaggtgaggaagctgccggggtccatctccgacag 841 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Minus Query: 185 ggcgtggcacttcttcctgatctctccctcagcgccggtgagcacg 230 ||||| |||||| ||||||||||| |||| || |||||||||||| Sbjct: 1095 ggcgtagcacttgttcctgatctcgccctgcgccccggtgagcacg 1050
>ref|XM_473984.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 987 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 376 tggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||| | |||||||||||||||||| ||| ||||||| || |||||||||||| Sbjct: 784 tggcgatgtgcctgtagtagctggtgtcgaacgtcctgaagctccccgggtccatctcc 726 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 197 cttcctgatctctccctcagcgccggtgagcac 229 |||||||||||| |||| |||||||||||||| Sbjct: 966 cttcctgatctccccctgggcgccggtgagcac 934
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 376 tggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||| | |||||||||||||||||| ||| ||||||| || |||||||||||| Sbjct: 32006537 tggcgatgtgcctgtagtagctggtgtcgaacgtcctgaagctccccgggtccatctcc 32006479 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 197 cttcctgatctctccctcagcgccggtgagcac 229 |||||||||||| |||| |||||||||||||| Sbjct: 32006719 cttcctgatctccccctgggcgccggtgagcac 32006687
>dbj|AK068148.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134G11, full insert sequence Length = 3544 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 376 tggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||| | |||||||||||||||||| ||| ||||||| || |||||||||||| Sbjct: 3155 tggcgatgtgcctgtagtagctggtgtcgaacgtcctgaagctccccgggtccatctcc 3097 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 197 cttcctgatctctccctcagcgccggtgagcac 229 |||||||||||| |||| |||||||||||||| Sbjct: 3337 cttcctgatctccccctgggcgccggtgagcac 3305
>tpe|BN000585.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx56 gene for class III peroxidase 56 precursor, exons 1-4 Length = 1918 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 376 tggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||| | |||||||||||||||||| ||| ||||||| || |||||||||||| Sbjct: 1715 tggcgatgtgcctgtagtagctggtgtcgaacgtcctgaagctccccgggtccatctcc 1657 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 197 cttcctgatctctccctcagcgccggtgagcac 229 |||||||||||| |||| |||||||||||||| Sbjct: 1897 cttcctgatctccccctgggcgccggtgagcac 1865
>emb|AL662988.4|OSJN00186 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089N06, complete sequence Length = 141752 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 376 tggcgacgtggcggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||| | |||||||||||||||||| ||| ||||||| || |||||||||||| Sbjct: 27244 tggcgatgtgcctgtagtagctggtgtcgaacgtcctgaagctccccgggtccatctcc 27186 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 197 cttcctgatctctccctcagcgccggtgagcac 229 |||||||||||| |||| |||||||||||||| Sbjct: 27426 cttcctgatctccccctgggcgccggtgagcac 27394
>ref|NM_197545.1| Oryza sativa (japonica cultivar-group) putative peroxidase (OSJNBa0040D23.2), mRNA Length = 1204 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 gccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| ||| |||||||||||| ||||| Sbjct: 1029 gccggtgagcacgccgacggcgcccatcttgaccatgg 992
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 |||||||||||||||||| |||| |||||||||||| | ||| |||||||||||| Sbjct: 42123 gcacttcttcctgatctcgccctggctgccggtgagcacttcgacgccgcccatcttgac 42064 Query: 251 catgga 256 |||||| Sbjct: 42063 catgga 42058 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 401 gtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||||||||||| || |||||||||||| Sbjct: 41913 gtcgaacgtcttgaagctccccgggtccatctcc 41880
>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete sequence Length = 105841 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 gccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| ||| |||||||||||| ||||| Sbjct: 98373 gccggtgagcacgccgacggcgcccatcttgaccatgg 98336
>gb|AC074196.14| Oryza sativa chromosome 10 BAC OSJNBa0040D23 genomic sequence, complete sequence Length = 134102 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 gccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| ||| |||||||||||| ||||| Sbjct: 23019 gccggtgagcacgccgacggcgcccatcttgaccatgg 22982
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 gccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| ||| |||||||||||| ||||| Sbjct: 20382871 gccggtgagcacgccgacggcgcccatcttgaccatgg 20382834
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 |||||||||||||||||| |||| |||||||||||| | ||| |||||||||||| Sbjct: 24439450 gcacttcttcctgatctcgccctggctgccggtgagcacttcgacgccgcccatcttgac 24439391 Query: 251 catgga 256 |||||| Sbjct: 24439390 catgga 24439385 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 401 gtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||||||||||| || |||||||||||| Sbjct: 24439240 gtcgaacgtcttgaagctccccgggtccatctcc 24439207
>dbj|D14997.1|RICPEROX Oryza sativa (japonica cultivar-group) mRNA for peroxidase, complete cds Length = 1325 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 |||||||||||||||||| |||| |||||||||||| | ||| |||||||||||| Sbjct: 1031 gcacttcttcctgatctcgccctggctgccggtgagcacttcgacgccgcccatcttgac 972 Query: 251 catgga 256 |||||| Sbjct: 971 catgga 966 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 401 gtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||||||||||| || |||||||||||| Sbjct: 821 gtcgaacgtcttgaagctccccgggtccatctcc 788
>dbj|AK105708.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E05, full insert sequence Length = 1422 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 gccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| ||| |||||||||||| ||||| Sbjct: 1138 gccggtgagcacgccgacggcgcccatcttgaccatgg 1101
>dbj|AK104950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-A02, full insert sequence Length = 1347 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 |||||||||||||||||| |||| |||||||||||| | ||| |||||||||||| Sbjct: 1060 gcacttcttcctgatctcgccctggctgccggtgagcacttcgacgccgcccatcttgac 1001 Query: 251 catgga 256 |||||| Sbjct: 1000 catgga 995 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 401 gtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||||||||||| || |||||||||||| Sbjct: 850 gtcgaacgtcttgaagctccccgggtccatctcc 817
>dbj|AK066855.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082J20, full insert sequence Length = 1348 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 |||||||||||||||||| |||| |||||||||||| | ||| |||||||||||| Sbjct: 1061 gcacttcttcctgatctcgccctggctgccggtgagcacttcgacgccgcccatcttgac 1002 Query: 251 catgga 256 |||||| Sbjct: 1001 catgga 996 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 401 gtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||||||||||| || |||||||||||| Sbjct: 851 gtcgaacgtcttgaagctccccgggtccatctcc 818
>tpe|BN000657.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx128 gene for class III peroxidase 128 precursor, exons 1-3 Length = 1794 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 gccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| ||| |||||||||||| ||||| Sbjct: 1755 gccggtgagcacgccgacggcgcccatcttgaccatgg 1718
>tpe|BN000603.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx74 gene for class III peroxidase 74 precursor, exons 1-4 Length = 1311 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 191 gcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttgat 250 |||||||||||||||||| |||| |||||||||||| | ||| |||||||||||| Sbjct: 1296 gcacttcttcctgatctcgccctggctgccggtgagcacttcgacgccgcccatcttgac 1237 Query: 251 catgga 256 |||||| Sbjct: 1236 catgga 1231 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Minus Query: 401 gtcgaaggtcttgaagctaccggggtccatctcc 434 |||||| ||||||||||| || |||||||||||| Sbjct: 1086 gtcgaacgtcttgaagctccccgggtccatctcc 1053
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 218 gccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| ||| |||||||||||| ||||| Sbjct: 20394143 gccggtgagcacgccgacggcgcccatcttgaccatgg 20394106
>ref|XM_476366.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1050 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 391 agtagctggtgtcgaaggtcttgaagctaccggggtccatctccg 435 |||||||| ||||||| || ||||||| |||||||||||||||| Sbjct: 829 agtagctgctgtcgaacctcgtgaagctcccggggtccatctccg 785
>dbj|AP004673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0617C02 Length = 135605 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 391 agtagctggtgtcgaaggtcttgaagctaccggggtccatctccg 435 |||||||| ||||||| || ||||||| |||||||||||||||| Sbjct: 4645 agtagctgctgtcgaacctcgtgaagctcccggggtccatctccg 4601
>tpe|BN000623.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx94 gene for class III peroxidase 94 precursor, exon 1 Length = 1050 Score = 50.1 bits (25), Expect = 0.007 Identities = 40/45 (88%) Strand = Plus / Minus Query: 391 agtagctggtgtcgaaggtcttgaagctaccggggtccatctccg 435 |||||||| ||||||| || ||||||| |||||||||||||||| Sbjct: 829 agtagctgctgtcgaacctcgtgaagctcccggggtccatctccg 785
>ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| | | || ||||||||||||||||| Sbjct: 938 gcgccggtgagcacgtcgatgttgcccatcttgatcatgg 899
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| | | || ||||||||||||||||| Sbjct: 12552432 gcgccggtgagcacgtcgatgttgcccatcttgatcatgg 12552393 Score = 40.1 bits (20), Expect = 6.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 ggcgtggcacttcttcctgatctctccctcagcgccggtgagcacgcc 232 ||||| |||| |||||||||||| || | ||||||||||||||||| Sbjct: 15654808 ggcgttgcacctcttcctgatctggccggcggcgccggtgagcacgcc 15654855
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| | | || ||||||||||||||||| Sbjct: 64042 gcgccggtgagcacgtcgatgttgcccatcttgatcatgg 64003
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| | | || ||||||||||||||||| Sbjct: 138047 gcgccggtgagcacgtcgatgttgcccatcttgatcatgg 138008
>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full insert sequence Length = 1492 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| | | || ||||||||||||||||| Sbjct: 1013 gcgccggtgagcacgtcgatgttgcccatcttgatcatgg 974
>dbj|AK059977.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B01, full insert sequence Length = 1015 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| | | || ||||||||||||||||| Sbjct: 702 gcgccggtgagcacgtcgatgttgcccatcttgatcatgg 663
>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for class III peroxidase 15 precursor, exons 1-3 Length = 5322 Score = 48.1 bits (24), Expect = 0.026 Identities = 36/40 (90%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| | | || ||||||||||||||||| Sbjct: 5198 gcgccggtgagcacgtcgatgttgcccatcttgatcatgg 5159
>ref|XM_728134.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000645.00.0) partial mRNA Length = 576 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 ttctctaattccttttttaattt 47 ||||||||||||||||||||||| Sbjct: 282 ttctctaattccttttttaattt 260
>ref|XM_971027.1| PREDICTED: Tribolium castaneum similar to CG10374-PA, isoform A, transcript variant 2 (LOC660518), mRNA Length = 988 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 311 gacgtagtctttggtggtggtgt 333 ||||||||||||||||||||||| Sbjct: 424 gacgtagtctttggtggtggtgt 402
>ref|XM_962211.1| PREDICTED: Tribolium castaneum similar to CG10374-PA, isoform A, transcript variant 1 (LOC660518), mRNA Length = 955 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 311 gacgtagtctttggtggtggtgt 333 ||||||||||||||||||||||| Sbjct: 389 gacgtagtctttggtggtggtgt 367
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Plus Query: 195 ttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttg 248 ||||||| |||||| |||| |||||||||||||||| ||| |||||||||| Sbjct: 20926204 ttcttccggatctcgccctggtcgccggtgagcacgccgacgcggcccatcttg 20926257
>dbj|AK109551.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-A03, full insert sequence Length = 1325 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Minus Query: 195 ttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttg 248 ||||||| |||||| |||| |||||||||||||||| ||| |||||||||| Sbjct: 1106 ttcttccggatctcgccctggtcgccggtgagcacgccgacgcggcccatcttg 1053
>gb|AY108615.1| Zea mays PCO132912 mRNA sequence Length = 1231 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Minus Query: 218 gccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| ||| ||||||||||| ||||| Sbjct: 930 gccggtgagcacgccgacggagcccatcttgaccatgg 893
>tpe|BN000667.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx138 gene for class III peroxidase 138 precursor, exons 1-4 Length = 9140 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Minus Query: 195 ttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttg 248 ||||||| |||||| |||| |||||||||||||||| ||| |||||||||| Sbjct: 9115 ttcttccggatctcgccctggtcgccggtgagcacgccgacgcggcccatcttg 9062
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Plus Query: 195 ttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttg 248 ||||||| |||||| |||| |||||||||||||||| ||| |||||||||| Sbjct: 20852418 ttcttccggatctcgccctggtcgccggtgagcacgccgacgcggcccatcttg 20852471
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Plus Query: 195 ttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttg 248 ||||||| |||||| |||| |||||||||||||||| ||| |||||||||| Sbjct: 11694 ttcttccggatctcgccctggtcgccggtgagcacgccgacgcggcccatcttg 11747
>emb|AL731880.3|CNS08C8J Oryza sativa chromosome 12, . BAC OSJNBa0035E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 107819 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Minus Query: 195 ttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttg 248 ||||||| |||||| |||| |||||||||||||||| ||| |||||||||| Sbjct: 32791 ttcttccggatctcgccctggtcgccggtgagcacgccgacgcggcccatcttg 32738
>gb|AY106450.1| Zea mays PCO105015 mRNA sequence Length = 1470 Score = 42.1 bits (21), Expect = 1.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 386 gcggtagtagctggtgtcgaaggtcttgaagctaccggggtccatctcc 434 |||||||||||| ||||||||| |||||| ||||||||||||||| Sbjct: 884 gcggtagtagctcaggtcgaaggtgcggaagctgccggggtccatctcc 836
>gb|AC007470.12| Drosophila melanogaster clone BACR14H22, complete sequence Length = 175977 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tcaatttctctaattccttt 39 |||||||||||||||||||| Sbjct: 94072 tcaatttctctaattccttt 94053
>ref|XM_450517.1| Oryza sativa (japonica cultivar-group), mRNA Length = 987 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 gatctctccctcagcgccggtgagcacg 230 ||||||||||| ||| |||||||||||| Sbjct: 960 gatctctccctgagctccggtgagcacg 933
>ref|NM_193889.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1029 Score = 40.1 bits (20), Expect = 6.4 Identities = 41/48 (85%) Strand = Plus / Minus Query: 185 ggcgtggcacttcttcctgatctctccctcagcgccggtgagcacgcc 232 ||||| |||| |||||||||||| || | ||||||||||||||||| Sbjct: 1017 ggcgttgcacctcttcctgatctggccggcggcgccggtgagcacgcc 970
>ref|XM_514021.1| PREDICTED: Pan troglodytes LOC457544 (LOC457544), mRNA Length = 6621 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ggagcgcggagtcggagcgg 359 |||||||||||||||||||| Sbjct: 692 ggagcgcggagtcggagcgg 673
>gb|AF172282.1| Oryza sativa adh1-adh2 region Length = 339485 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||||| ||| |||||||||| ||||| Sbjct: 53197 gcgccggtgagcacgccgacgctccccatcttgaccatgg 53158
>gb|BT018922.1| Zea mays clone Contig31.F mRNA sequence Length = 1367 Score = 40.1 bits (20), Expect = 6.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 190 ggcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttga 249 |||||| ||||||||||| || | ||||||||||||||| | ||| ||||||||| Sbjct: 1010 ggcactgcttcctgatctggccgtttgcgccggtgagcacgtcgacgcggcccatcttct 951 Query: 250 tcatggac 257 |||||||| Sbjct: 950 tcatggac 943
>gb|AC102223.9| Mus musculus chromosome 1, clone RP24-296E23, complete sequence Length = 182165 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 taattccttttttaatttga 49 |||||||||||||||||||| Sbjct: 105792 taattccttttttaatttga 105811
>gb|AC092244.2| Drosophila melanogaster clone BACR19N22, complete sequence Length = 171000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ctctaattccttttttaatt 46 |||||||||||||||||||| Sbjct: 3781 ctctaattccttttttaatt 3800
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatttctctaattccttttt 41 |||||||||||||||||||| Sbjct: 2609036 aatttctctaattccttttt 2609055
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatttctctaattccttttt 41 |||||||||||||||||||| Sbjct: 2565901 aatttctctaattccttttt 2565920
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatttctctaattccttttt 41 |||||||||||||||||||| Sbjct: 2566237 aatttctctaattccttttt 2566256
>gb|AF289077.4| Homo sapiens chromosome 8 clone CTD-2003M15 map p23.2, complete sequence Length = 145170 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ttttaatttgacaatggcttttactcaa 66 |||| ||||||||||||||||| ||||| Sbjct: 122231 ttttcatttgacaatggctttttctcaa 122258
>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2 of 11 of the complete sequence Length = 613322 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 tcaatttctctaattcctttttta 43 ||||||| |||||||||||||||| Sbjct: 265721 tcaatttttctaattcctttttta 265744
>ref|XM_759689.1| Theileria parva strain Muguga hypothetical protein (TP02_0216) partial mRNA Length = 3897 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 caatttctctaattcctttt 40 |||||||||||||||||||| Sbjct: 2100 caatttctctaattcctttt 2081
>emb|AL732314.18| Human DNA sequence from clone RP13-465B17 on chromosome X Contains the 5' end of the gene for protein phosphatase 2A 48 kDa regulatory subunit (PR48), a fatty acid binding protein 5 (psoriasis-associated) (FABP5) pseudogene, a pseudogene similar to part of keratin 18 (KRT18) and nine CpG islands, complete sequence Length = 218723 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ttcttcctgatctctccctc 214 |||||||||||||||||||| Sbjct: 99588 ttcttcctgatctctccctc 99569
>gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051B13, complete sequence Length = 178000 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||||| ||| |||||||||| ||||| Sbjct: 167886 gcgccggtgagcacgccgacgctccccatcttgaccatgg 167925
>gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037P04, complete sequence Length = 139693 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||||| ||| |||||||||| ||||| Sbjct: 95328 gcgccggtgagcacgccgacgctccccatcttgaccatgg 95367
>emb|AL162717.10| Human DNA sequence from clone RP11-123H22 on chromosome 13q14.2-21.2 Contains a novel gene, complete sequence Length = 153859 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 tcaatttctctaattcctttttta 43 ||||||| |||||||||||||||| Sbjct: 145251 tcaatttttctaattcctttttta 145274
>emb|AL021398.1|HS964D12 Human DNA sequence from clone RP5-964D12 on chromosome 1q24-25 Contains the 5' end of the ASTN gene for astrotactin and the 5' end of the gene for a novel protein (KIAA1747, LOC57795), complete sequence Length = 146963 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 340 ggagcgcggagtcggagcgg 359 |||||||||||||||||||| Sbjct: 52033 ggagcgcggagtcggagcgg 52014
>gb|AC160115.2| Mus musculus BAC clone RP23-473K23 from chromosome 13, complete sequence Length = 182345 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cttcttcctgatctctccct 213 |||||||||||||||||||| Sbjct: 170848 cttcttcctgatctctccct 170829
>emb|AL034583.1|SPAC637 S.pombe chromosome I cosmid c637 Length = 35905 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tttctctaattccttttttaattt 47 ||||||||||||||| |||||||| Sbjct: 170 tttctctaattccttatttaattt 193
>emb|CR857837.1| Pongo pygmaeus mRNA; cDNA DKFZp459O1454 (from clone DKFZp459O1454) Length = 4045 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 ggagcgcggagtcggagcgg 359 |||||||||||||||||||| Sbjct: 28 ggagcgcggagtcggagcgg 47
>emb|BX571768.19| Zebrafish DNA sequence from clone DKEYP-2C4 in linkage group 11, complete sequence Length = 111222 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ataataaatcatactactac 100 |||||||||||||||||||| Sbjct: 102262 ataataaatcatactactac 102243
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gaacttgccggtggcgatgc 306 |||||||||||||||||||| Sbjct: 178045 gaacttgccggtggcgatgc 178026
>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome Length = 2694756 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tctaattccttttttaattt 47 |||||||||||||||||||| Sbjct: 1624134 tctaattccttttttaattt 1624115
>gb|AC009707.9| Homo sapiens chromosome 8, clone RP11-315I17, complete sequence Length = 176193 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ttttaatttgacaatggcttttactcaa 66 |||| ||||||||||||||||| ||||| Sbjct: 152048 ttttcatttgacaatggctttttctcaa 152075
>gb|AC105899.1| Drosophila melanogaster, chromosome 2L, region 22C-22C, BAC clone BACR11F10, complete sequence Length = 175115 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ctctaattccttttttaatt 46 |||||||||||||||||||| Sbjct: 49675 ctctaattccttttttaatt 49656
>emb|AL935185.11| Zebrafish DNA sequence from clone CH211-250A16 in linkage group 21, complete sequence Length = 191281 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ataataaatcatactactac 100 |||||||||||||||||||| Sbjct: 117625 ataataaatcatactactac 117606
>gb|AC154213.3| Mus musculus BAC clone RP24-120I12 from chromosome 14, complete sequence Length = 183773 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 tctaattccttttttaattt 47 |||||||||||||||||||| Sbjct: 76526 tctaattccttttttaattt 76507
>ref|NM_001020047.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC27D7.13c), partial mRNA Length = 2013 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 tttctctaattccttttttaattt 47 ||||||||||||||| |||||||| Sbjct: 720 tttctctaattccttatttaattt 697
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gaacttgccggtggcgatgc 306 |||||||||||||||||||| Sbjct: 287609 gaacttgccggtggcgatgc 287590
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gccggtggcgatgcgctgga 312 |||||||||||||||||||| Sbjct: 290635 gccggtggcgatgcgctgga 290616
>gb|AC018694.4|AC018694 Homo sapiens BAC clone RP11-563P16 from 11, complete sequence Length = 196832 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 gataataaatcatactacta 99 |||||||||||||||||||| Sbjct: 73177 gataataaatcatactacta 73158
>gb|AC007144.13|AC007144 Drosophila melanogaster, chromosome 2L, region 38F-39A, BAC clone BACR06G10, complete sequence Length = 176082 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 caatatcagacatacatcctcgaa 130 ||||||||||||||||| |||||| Sbjct: 111406 caatatcagacatacatgctcgaa 111383
>gb|AC008320.4|AC008320 Drosophila melanogaster, chromosome 2L, region 22A-22B, BAC clone BACR18A24, complete sequence Length = 160551 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ctctaattccttttttaatt 46 |||||||||||||||||||| Sbjct: 121570 ctctaattccttttttaatt 121589
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 gatctctccctcagcgccggtgagcacg 230 ||||||||||| ||| |||||||||||| Sbjct: 9434246 gatctctccctgagctccggtgagcacg 9434219
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ataaatcatactactacagt 103 |||||||||||||||||||| Sbjct: 584315 ataaatcatactactacagt 584334
>gb|AC154574.2| Mus musculus BAC clone RP23-399K3 from chromosome 14, complete sequence Length = 180263 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ttttaatttgacaatggctt 58 |||||||||||||||||||| Sbjct: 141013 ttttaatttgacaatggctt 141032
>gb|AC117381.5| Homo sapiens 3 BAC RP11-783D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 205933 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tgtccaagaggagcgcggag 350 |||||||||||||||||||| Sbjct: 201342 tgtccaagaggagcgcggag 201361
>gb|AC009720.19| Homo sapiens chromosome 17, clone RP11-1094H24, complete sequence Length = 146101 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tccatgcctcaatttctcta 31 |||||||||||||||||||| Sbjct: 15523 tccatgcctcaatttctcta 15542
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 cgtcgaacttgccggtggcg 302 |||||||||||||||||||| Sbjct: 2499067 cgtcgaacttgccggtggcg 2499048
>gb|AC002401.2| Homo sapiens chromosome 17, clone RP5-875H18, complete sequence Length = 113128 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tccatgcctcaatttctcta 31 |||||||||||||||||||| Sbjct: 110655 tccatgcctcaatttctcta 110674
>gb|AC009428.4|AC009428 Homo sapiens chromosome , clone RP11-45M12, complete sequence Length = 167172 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 39 ttttaatttgacaatggcttttactcaa 66 |||| ||||||||||||||||| ||||| Sbjct: 7649 ttttcatttgacaatggctttttctcaa 7676
>dbj|AP002968.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416G11 Length = 138858 Score = 40.1 bits (20), Expect = 6.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 185 ggcgtggcacttcttcctgatctctccctcagcgccggtgagcacgcc 232 ||||| |||| |||||||||||| || | ||||||||||||||||| Sbjct: 92705 ggcgttgcacctcttcctgatctggccggcggcgccggtgagcacgcc 92752
>dbj|AP005879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0024J13 Length = 127614 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 gatctctccctcagcgccggtgagcacg 230 ||||||||||| ||| |||||||||||| Sbjct: 117660 gatctctccctgagctccggtgagcacg 117633
>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0007D08 Length = 183142 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ataaatcatactactacagt 103 |||||||||||||||||||| Sbjct: 174275 ataaatcatactactacagt 174294
>dbj|AP004566.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498H04 Length = 151046 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 ataaatcatactactacagt 103 |||||||||||||||||||| Sbjct: 11693 ataaatcatactactacagt 11712
>dbj|AP006564.1| Homo sapiens genomic DNA, chromosome 18 clone:RP11-1157N02_A, complete sequence Length = 127500 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 acaactaagaatcaaagaac 174 |||||||||||||||||||| Sbjct: 56751 acaactaagaatcaaagaac 56770
>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full insert sequence Length = 1271 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||| | || ||||||||||||||||| Sbjct: 1008 gcgccggtgagcacgttgatgttgcccatcttgatcatgg 969
>gb|AY109037.1| Zea mays PCO106247 mRNA sequence Length = 1555 Score = 40.1 bits (20), Expect = 6.4 Identities = 56/68 (82%) Strand = Plus / Minus Query: 190 ggcacttcttcctgatctctccctcagcgccggtgagcacgcctacgtcgcccatcttga 249 |||||| ||||||||||| || | ||||||||||||||| | ||| ||||||||| Sbjct: 1184 ggcactgcttcctgatctggccgttggcgccggtgagcacgtcgacgcggcccatcttct 1125 Query: 250 tcatggac 257 |||||||| Sbjct: 1124 tcatggac 1117
>tpe|BN000662.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx133 gene for class III peroxidase 133 precursor, exons 1-4 Length = 1438 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||||| ||| |||||||||| ||||| Sbjct: 1398 gcgccggtgagcacgccgacgctccccatcttgaccatgg 1359
>tpe|BN000661.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx132 gene for class III peroxidase 132 precursor, exons 1-4 Length = 1438 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/40 (87%) Strand = Plus / Minus Query: 216 gcgccggtgagcacgcctacgtcgcccatcttgatcatgg 255 ||||||||||||||||| ||| |||||||||| ||||| Sbjct: 1398 gcgccggtgagcacgccgacgctccccatcttgaccatgg 1359
>tpe|BN000650.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx121 gene for class III peroxidase 121 precursor, exons 1-2 Length = 1070 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 203 gatctctccctcagcgccggtgagcacg 230 ||||||||||| ||| |||||||||||| Sbjct: 1043 gatctctccctgagctccggtgagcacg 1016
>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete sequence Length = 270158 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 caatatcagacatacatcctcgaa 130 ||||||||||||||||| |||||| Sbjct: 210224 caatatcagacatacatgctcgaa 210201
>gb|AE003633.3| Drosophila melanogaster chromosome 2L, section 42 of 83 of the complete sequence Length = 266175 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tcaatttctctaattccttt 39 |||||||||||||||||||| Sbjct: 141880 tcaatttctctaattccttt 141899
>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete sequence Length = 346734 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ctctaattccttttttaatt 46 |||||||||||||||||||| Sbjct: 48465 ctctaattccttttttaatt 48484
>gb|AC116797.11| Mus musculus chromosome 13, clone RP24-327I15, complete sequence Length = 145747 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 cttcttcctgatctctccct 213 |||||||||||||||||||| Sbjct: 21431 cttcttcctgatctctccct 21412
>gb|AC005749.1|AC005749 Drosophila melanogaster DNA sequence (P1s DS06378 (D278) and DS03995 (D277)), complete sequence Length = 96288 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ctctaattccttttttaatt 46 |||||||||||||||||||| Sbjct: 243 ctctaattccttttttaatt 262
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 aatttctctaattccttttt 41 |||||||||||||||||||| Sbjct: 2565777 aatttctctaattccttttt 2565796
>gb|AC154614.3| Mus musculus BAC clone RP23-255I2 from chromosome 14, complete sequence Length = 186187 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 ttttaatttgacaatggctt 58 |||||||||||||||||||| Sbjct: 11729 ttttaatttgacaatggctt 11748
>emb|AL009227.1|SPAC27D7 S.pombe chromosome I cosmid c27D7 Length = 35892 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 24 tttctctaattccttttttaattt 47 ||||||||||||||| |||||||| Sbjct: 30573 tttctctaattccttatttaattt 30596
>emb|AL606863.15| Mouse DNA sequence from clone RP23-37J4 on chromosome 1, complete sequence Length = 175099 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 taattccttttttaatttga 49 |||||||||||||||||||| Sbjct: 56181 taattccttttttaatttga 56200
>dbj|AB000269.1| Schizosaccharomyces pombe ssm4 gene, complete cds Length = 4599 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 tttctctaattccttttttaattt 47 ||||||||||||||| |||||||| Sbjct: 1054 tttctctaattccttatttaattt 1031 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,985,005 Number of Sequences: 3902068 Number of extensions: 3985005 Number of successful extensions: 95678 Number of sequences better than 10.0: 119 Number of HSP's better than 10.0 without gapping: 116 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 94699 Number of HSP's gapped (non-prelim): 968 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
