ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart25e05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1387 Score = 268 bits (135), Expect = 6e-69 Identities = 162/171 (94%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 1203 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 1144 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1143 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 1084 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 1083 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 1033
>ref|XM_506737.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1073_F05.31 mRNA Length = 1396 Score = 268 bits (135), Expect = 6e-69 Identities = 162/171 (94%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 1197 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 1138 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1137 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 1078 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 1077 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 1027
>gb|DQ234272.1| Oryza sativa (indica cultivar-group) cinnamyl-alcohol dehydrogenase (GH2) gene, complete cds Length = 4320 Score = 268 bits (135), Expect = 6e-69 Identities = 162/171 (94%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 3973 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 3914 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3913 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 3854 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 3853 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 3803
>tpg|BK003969.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cinnamyl alcohol dehydrogenase (CAD2) gene, complete cds Length = 4183 Score = 268 bits (135), Expect = 6e-69 Identities = 162/171 (94%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 3815 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 3756 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3755 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 3696 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 3695 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 3645
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 268 bits (135), Expect = 6e-69 Identities = 162/171 (94%) Strand = Plus / Plus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 4870345 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 4870404 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4870405 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 4870464 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 4870465 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 4870515 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaag 57 ||||||||||||||||||||| Sbjct: 35342903 ccggcgacgtcgacgacgaag 35342883
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 268 bits (135), Expect = 6e-69 Identities = 162/171 (94%) Strand = Plus / Plus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 112504 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 112563 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 112564 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 112623 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 112624 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 112674
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 268 bits (135), Expect = 6e-69 Identities = 162/171 (94%) Strand = Plus / Plus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 15084 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 15143 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 15144 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 15203 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 15204 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 15254
>dbj|AK105011.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H09, full insert sequence Length = 1376 Score = 268 bits (135), Expect = 6e-69 Identities = 162/171 (94%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 1196 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 1137 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1136 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 1077 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 1076 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 1026
>dbj|AK059804.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G04, full insert sequence Length = 1103 Score = 268 bits (135), Expect = 6e-69 Identities = 162/171 (94%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 940 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcgaggcgctc 881 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 880 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 821 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 820 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 770
>dbj|AB122054.1| Oryza sativa (japonica cultivar-group) CAD mRNA for cinnamyl alcohol dehydrogenase, partial cds Length = 653 Score = 260 bits (131), Expect = 1e-66 Identities = 161/171 (94%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| |||||||||||||| || | ||| Sbjct: 447 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctcaaggcgctc 388 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 387 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 328 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 327 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 277
>dbj|AK071794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I07, full insert sequence Length = 1396 Score = 260 bits (131), Expect = 1e-66 Identities = 161/171 (94%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| | ||| Sbjct: 1197 gttgctgccggcgacgtcgacgacgaagcgctagcggacgtcgttgcgctcgaggcgctc 1138 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1137 gagggcctggttgacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtc 1078 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||||||||| ||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 1077 gacgcagaagttgagcacctcctccgtctcggccatgctcccgatgaagct 1027
>gb|AF010290.1|AF010290 Lolium perenne cinnamyl alcohol dehydrogenase mRNA, complete cds Length = 1382 Score = 244 bits (123), Expect = 9e-62 Identities = 159/171 (92%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1145 gttgctccctgcgacgtcgacgacgaagcggtacctgacgtcgttgcgctcgagcctctc 1086 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1085 aagcgcctggttgaggtagtccatcttgacgacctcgatctgcgaggtgaggcccttgtc 1026 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 |||||||||| |||| |||||||| ||||| || ||||||||||||||||| Sbjct: 1025 gacgcagaacctgagcacctcctcggtctcctcgatgctcccgatgaagct 975
>gb|AF188295.1|AF188295 Festuca arundinacea cinnamyl alcohol dehydrogenase 2b mRNA, complete cds Length = 1526 Score = 238 bits (120), Expect = 5e-60 Identities = 159/172 (92%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1155 gttgctcccagcgacgtcgacgacgaagcggtacctgacgtcgttgcgctcgagcctctc 1096 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 |||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1095 gagcgcgtggttgaggtagtccatcttgacgacctcgatctgcgaggtgggccccttttc 1036 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctc 201 |||||||||| |||| |||||||| ||||| || |||||||||||||||||| Sbjct: 1035 gacgcagaacctgagcacctcctcggtctcctcgatgctcccgatgaagctc 984
>gb|AF188294.1|AF188294 Festuca arundinacea cinnamyl alcohol dehydrogenase 2a mRNA, complete cds Length = 1322 Score = 238 bits (120), Expect = 5e-60 Identities = 159/172 (92%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 ||||||||| ||||||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 1155 gttgctcccagcgacgtcgacgacgaagcggtacctgacatcgttgcgctcgagcctctc 1096 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1095 gagcgcgtggttgaggtagtccatcttgacgacctcgatctgcgaggtgagccccttttc 1036 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctc 201 |||||||||| |||| |||||||| ||||| || |||||||||||||||||| Sbjct: 1035 gacgcagaacctgagcacctcctcggtctcctcgatgctcccgatgaagctc 984
>gb|AF188293.1|AF188293 Festuca arundinacea cinnamyl alcohol dehydrogenase 1b mRNA, complete cds Length = 1339 Score = 236 bits (119), Expect = 2e-59 Identities = 158/171 (92%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 ||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1104 gttgctccctgcgacgtcgacgacgaagcggtacctgacgtcgttgcgctcgagcctctc 1045 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 1044 gagcgcctggttgaggtagtccatcttgacgacctcgatctgcgaggtgaggcccttttc 985 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 |||||||||| | || |||||||| ||||| || ||||||||||||||||| Sbjct: 984 gacgcagaacctaagcacctcctcggtctcctcgatgctcccgatgaagct 934
>gb|AF188292.1|AF188292 Festuca arundinacea cinnamyl alcohol dehydrogenase 1a mRNA, complete cds Length = 1501 Score = 228 bits (115), Expect = 5e-57 Identities = 157/171 (91%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 ||||||||| ||||| ||||||||||||||||| | ||||||||||||||||||||||| Sbjct: 1104 gttgctccctgcgacatcgacgacgaagcggtacctgacgtcgttgcgctcgagcctctc 1045 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 1044 gagcgcctggttgaggtagtccatcttgacgacctcgatctgcgaggtgaggcccttttc 985 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagct 200 |||||||||| | || |||||||| ||||| || ||||||||||||||||| Sbjct: 984 gacgcagaacctaagcacctcctcggtctcctcgatgctcccgatgaagct 934
>emb|AJ231135.1|SOF231135 Saccharum officinarum mRNA for cinnamyl alcohol dehydrogenase Length = 1593 Score = 190 bits (96), Expect = 1e-45 Identities = 153/172 (88%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| || Sbjct: 1245 gttgctgccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgatc 1186 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||||||| ||| ||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1185 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 1126 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctc 201 ||||||||||| ||| ||||| | |||||||| ||||| |||||||||||| Sbjct: 1125 gacgcagaactggagcacctcggcggtctcgtcgatgctgccgatgaagctc 1074
>emb|Y13733.1|ZMCADGENE Zea mays mRNA for cinnamyl alcohol dehydrogense Length = 1516 Score = 190 bits (96), Expect = 1e-45 Identities = 153/172 (88%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| ||| Sbjct: 1189 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 1130 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||||||| ||| ||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1129 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 1070 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctc 201 ||||||||||| || ||||| | |||||||| ||||| |||||||||||| Sbjct: 1069 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctc 1018
>emb|AJ005702.1|ZMA5702 Zea mays mRNA for cinnamyl alcohol dehydrogenase Length = 1517 Score = 190 bits (96), Expect = 1e-45 Identities = 153/172 (88%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| ||| Sbjct: 1134 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 1075 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||||||| ||| ||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1074 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 1015 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctc 201 ||||||||||| || ||||| | |||||||| ||||| |||||||||||| Sbjct: 1014 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctc 963
>gb|AY109876.1| Zea mays CL1675_1 mRNA sequence Length = 1649 Score = 190 bits (96), Expect = 1e-45 Identities = 153/172 (88%) Strand = Plus / Minus Query: 30 gttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctc 89 |||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| ||| Sbjct: 1190 gttgctaccggcgacgtcgacgacgaagcggtagcggacgtcgttgcgctccagccgctc 1131 Query: 90 gagcgcctggttgacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtc 149 ||||||| ||| ||||| |||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1130 cagcgcctcgttcacgtaccccatcttgaccacctcgatctgggaggtgagccccttgtc 1071 Query: 150 gacgcagaacttgaggacctcctccgtctcgtccatgctcccgatgaagctc 201 ||||||||||| || ||||| | |||||||| ||||| |||||||||||| Sbjct: 1070 gacgcagaactgaagcacctcagcggtctcgtcgatgctgccgatgaagctc 1019
>dbj|AK105739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A05, full insert sequence Length = 1091 Score = 165 bits (83), Expect = 6e-38 Identities = 95/99 (95%) Strand = Plus / Minus Query: 102 gacgtagtccatcttgacgacctcgatctgcgaggtgagccccttgtcgacgcagaactt 161 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 553 gacgtagtccatcttgacgacctcgatctgggaggtgagccccttgtcgacgcagaagtt 494 Query: 162 gaggacctcctccgtctcgtccatgctcccgatgaagct 200 ||| ||||||||||||||| ||||||||||||||||||| Sbjct: 493 gagcacctcctccgtctcggccatgctcccgatgaagct 455
>gb|AY104431.1| Zea mays PCO149657 mRNA sequence Length = 1491 Score = 85.7 bits (43), Expect = 5e-14 Identities = 79/91 (86%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcgagcgcc 96 ||||||||||||| ||||||||||||||| |||||||| |||||||| ||| | ||| Sbjct: 1280 ccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctcgagccgctccatggcc 1221 Query: 97 tggttgacgtagtccatcttgacgacctcga 127 |||||||||||||||||||| |||||||| Sbjct: 1220 gtgttgacgtagtccatcttgatgacctcga 1190
>dbj|AK072000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094F14, full insert sequence Length = 2015 Score = 75.8 bits (38), Expect = 5e-11 Identities = 80/94 (85%) Strand = Plus / Plus Query: 32 tgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcga 91 |||| ||||| ||||||| ||||||||||||||| |||||||| ||| |||| ||| | Sbjct: 125 tgctgccggcaacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 184 Query: 92 gcgcctggttgacgtagtccatcttgacgacctc 125 |||| |||||||||||||||||||| |||||| Sbjct: 185 tcgccgtgttgacgtagtccatcttgatgacctc 218
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 69.9 bits (35), Expect = 3e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 32 tgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcga 91 |||| ||||||||||||| ||||||||||||||| |||||||| ||| |||| ||| | Sbjct: 13932446 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 13932505 Query: 92 gcgcctggttgacgtagtccatcttga 118 ||| |||||||||||||||||||| Sbjct: 13932506 tcgcggtgttgacgtagtccatcttga 13932532 Score = 67.9 bits (34), Expect = 1e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 32 tgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcga 91 |||| ||||| ||||||| ||||||||||||||| || ||||| ||| |||| ||| | Sbjct: 13941682 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 13941623 Query: 92 gcgcctggttgacgtagtccatcttgacgacctc 125 |||| |||||||||||||||||||| |||||| Sbjct: 13941622 tcgccgtgttgacgtagtccatcttgatgacctc 13941589 Score = 61.9 bits (31), Expect = 7e-07 Identities = 43/47 (91%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgag 83 |||||||||||||||||||||||||| | ||||||||| | |||||| Sbjct: 13947972 ccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgag 13947926 Score = 54.0 bits (27), Expect = 2e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 37 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgag 83 ||||||||||||| |||||||||||| | ||||||||| | |||||| Sbjct: 13928573 ccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgag 13928619 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctaggttgctcccggcgacg 45 |||||||||||||||||||| Sbjct: 10253759 ctaggttgctcccggcgacg 10253740 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cccggcgacgtcgacgacga 55 |||||||||||||||||||| Sbjct: 9773748 cccggcgacgtcgacgacga 9773729
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0435D08 Length = 148912 Score = 69.9 bits (35), Expect = 3e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 32 tgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcga 91 |||| ||||||||||||| ||||||||||||||| |||||||| ||| |||| ||| | Sbjct: 86123 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 86182 Query: 92 gcgcctggttgacgtagtccatcttga 118 ||| |||||||||||||||||||| Sbjct: 86183 tcgcggtgttgacgtagtccatcttga 86209 Score = 67.9 bits (34), Expect = 1e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 32 tgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcga 91 |||| ||||| ||||||| ||||||||||||||| || ||||| ||| |||| ||| | Sbjct: 95359 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 95300 Query: 92 gcgcctggttgacgtagtccatcttgacgacctc 125 |||| |||||||||||||||||||| |||||| Sbjct: 95299 tcgccgtgttgacgtagtccatcttgatgacctc 95266 Score = 61.9 bits (31), Expect = 7e-07 Identities = 43/47 (91%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgag 83 |||||||||||||||||||||||||| | ||||||||| | |||||| Sbjct: 101649 ccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgag 101603 Score = 54.0 bits (27), Expect = 2e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 37 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgag 83 ||||||||||||| |||||||||||| | ||||||||| | |||||| Sbjct: 82250 ccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgag 82296
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0650H04 Length = 134533 Score = 69.9 bits (35), Expect = 3e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 32 tgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcga 91 |||| ||||||||||||| ||||||||||||||| |||||||| ||| |||| ||| | Sbjct: 34920 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 34979 Query: 92 gcgcctggttgacgtagtccatcttga 118 ||| |||||||||||||||||||| Sbjct: 34980 tcgcggtgttgacgtagtccatcttga 35006 Score = 67.9 bits (34), Expect = 1e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 32 tgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcga 91 |||| ||||| ||||||| ||||||||||||||| || ||||| ||| |||| ||| | Sbjct: 44156 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 44097 Query: 92 gcgcctggttgacgtagtccatcttgacgacctc 125 |||| |||||||||||||||||||| |||||| Sbjct: 44096 tcgccgtgttgacgtagtccatcttgatgacctc 44063 Score = 61.9 bits (31), Expect = 7e-07 Identities = 43/47 (91%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgag 83 |||||||||||||||||||||||||| | ||||||||| | |||||| Sbjct: 50446 ccggcgacgtcgacgacgaagcggtacctcacgtcgttcctctcgag 50400 Score = 54.0 bits (27), Expect = 2e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 37 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgag 83 ||||||||||||| |||||||||||| | ||||||||| | |||||| Sbjct: 31047 ccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgag 31093
>dbj|AK108849.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-A05, full insert sequence Length = 1084 Score = 69.9 bits (35), Expect = 3e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 32 tgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcga 91 |||| ||||||||||||| ||||||||||||||| |||||||| ||| |||| ||| | Sbjct: 32 tgctgccggcgacgtcgatgacgaagcggtagcggacgtcgttcttctccagccgctcca 91 Query: 92 gcgcctggttgacgtagtccatcttga 118 ||| |||||||||||||||||||| Sbjct: 92 tcgcggtgttgacgtagtccatcttga 118
>dbj|AK067085.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096I15, full insert sequence Length = 1916 Score = 67.9 bits (34), Expect = 1e-08 Identities = 79/94 (84%) Strand = Plus / Minus Query: 32 tgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctctcga 91 |||| ||||| ||||||| ||||||||||||||| || ||||| ||| |||| ||| | Sbjct: 1672 tgctgccggcaacgtcgatgacgaagcggtagcggacatcgttcttctccagccgctcca 1613 Query: 92 gcgcctggttgacgtagtccatcttgacgacctc 125 |||| |||||||||||||||||||| |||||| Sbjct: 1612 tcgccgtgttgacgtagtccatcttgatgacctc 1579
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 4e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 45 gtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcc 85 ||||||||||||||||||| | ||||||||||||||||||| Sbjct: 524556 gtcgacgacgaagcggtagtggacgtcgttgcgctcgagcc 524596
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 4e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 45 gtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcc 85 ||||||||||||||||||| | ||||||||||||||||||| Sbjct: 524556 gtcgacgacgaagcggtagtggacgtcgttgcgctcgagcc 524596
>emb|BX000493.1|CNS08CDJ Oryza sativa chromosome 11, . BAC OSJNBb0037D03 of library OSJNBb from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130544 Score = 65.9 bits (33), Expect = 4e-08 Identities = 39/41 (95%) Strand = Plus / Minus Query: 45 gtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcc 85 ||||||||||||||||||| | ||||||||||||||||||| Sbjct: 45756 gtcgacgacgaagcggtagtggacgtcgttgcgctcgagcc 45716
>gb|DQ358689.1| Phleum pratense cinnamyl alcohol dehydrogenase gene, partial cds Length = 1075 Score = 60.0 bits (30), Expect = 3e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 78 ctcgagcctctcgagcgcctggttgacgtagtccatcttgacgacctcga 127 |||||||| ||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 1048 ctcgagccgctcgatcgccgtgttcacgtagtccatcttgacgacctcga 999
>gb|AF472591.1| Lolium perenne cinnamyl alcohol dehydrogenase (CAD1) mRNA, complete cds Length = 1325 Score = 58.0 bits (29), Expect = 1e-05 Identities = 84/101 (83%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 28 aggttgctcccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgagcctc 87 |||| ||| ||||||||||||| |||||||||||| | |||||||| ||| |||| | Sbjct: 1077 aggtggctgccggcgacgtcgatgacgaagcggtacctgacgtcgttcttctctagccgc 1018 Query: 88 tcgagcgcctggttgac-gtagtccatcttgacgacctcga 127 |||| || |||||| ||||||||||||||||||||||| Sbjct: 1017 tcgatggcggtgttgaccgtagtccatcttgacgacctcga 977
>gb|DQ478935.1| Zizania latifolia lysine ketoglutarate reductase/saccharopine dehydrogenase biofunctional enzyme (LKR/SDH) mRNA, complete cds Length = 3240 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaagcggtagcgcacgtc 71 ||||||||||||| ||||||||||||||| ||||| Sbjct: 114 ccggcgacgtcgatgacgaagcggtagcggacgtc 80
>dbj|AK059858.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-B03, full insert sequence Length = 1407 Score = 54.0 bits (27), Expect = 2e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaagcggtagcgcacgtcgttgcgctcgag 83 ||||||||||||| |||||||||||| | ||||||||| | |||||| Sbjct: 1164 ccggcgacgtcgatgacgaagcggtacctcacgtcgttcctctcgag 1118
>ref|XM_474988.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1083 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 51 gacgaagcggtagcgcacgtcgttgcgc 78 ||||||||||||||| |||||||||||| Sbjct: 1053 gacgaagcggtagcggacgtcgttgcgc 1026
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 45 gtcgacgacgaagcggtagcgcacgtcg 72 ||||| |||||||||||||||||||||| Sbjct: 3403047 gtcgatgacgaagcggtagcgcacgtcg 3403020
>emb|X63450.1|MBADH M.bovis adh gene for alcohol dehydrogenase Length = 1619 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 45 gtcgacgacgaagcggtagcgcacgtcg 72 ||||| |||||||||||||||||||||| Sbjct: 1252 gtcgatgacgaagcggtagcgcacgtcg 1225
>emb|BX842581.1| Mycobacterium tuberculosis H37Rv complete genome; segment 10/13 Length = 348676 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 45 gtcgacgacgaagcggtagcgcacgtcg 72 ||||| |||||||||||||||||||||| Sbjct: 288273 gtcgatgacgaagcggtagcgcacgtcg 288246
>emb|BX248344.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 11/14 Length = 318050 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 45 gtcgacgacgaagcggtagcgcacgtcg 72 ||||| |||||||||||||||||||||| Sbjct: 238870 gtcgatgacgaagcggtagcgcacgtcg 238843
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Plus Query: 51 gacgaagcggtagcgcacgtcgttgcgc 78 ||||||||||||||| |||||||||||| Sbjct: 8595509 gacgaagcggtagcggacgtcgttgcgc 8595536
>dbj|AK099270.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021L06, full insert sequence Length = 1355 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 51 gacgaagcggtagcgcacgtcgttgcgc 78 ||||||||||||||| |||||||||||| Sbjct: 1149 gacgaagcggtagcggacgtcgttgcgc 1122
>dbj|AK071484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091M10, full insert sequence Length = 1378 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 51 gacgaagcggtagcgcacgtcgttgcgc 78 ||||||||||||||| |||||||||||| Sbjct: 1152 gacgaagcggtagcggacgtcgttgcgc 1125
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Minus Query: 45 gtcgacgacgaagcggtagcgcacgtcg 72 ||||| |||||||||||||||||||||| Sbjct: 3442555 gtcgatgacgaagcggtagcgcacgtcg 3442528
>emb|AL731598.2|OSJN00248 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065B15, complete sequence Length = 150007 Score = 48.1 bits (24), Expect = 0.010 Identities = 27/28 (96%) Strand = Plus / Plus Query: 51 gacgaagcggtagcgcacgtcgttgcgc 78 ||||||||||||||| |||||||||||| Sbjct: 55952 gacgaagcggtagcggacgtcgttgcgc 55979
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 46.1 bits (23), Expect = 0.041 Identities = 26/27 (96%) Strand = Plus / Minus Query: 42 gacgtcgacgacgaagcggtagcgcac 68 |||||||| |||||||||||||||||| Sbjct: 2408826 gacgtcgatgacgaagcggtagcgcac 2408800
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 80 cgagcctctcgagcgcctggttgacg 105 |||| ||||||||||||||||||||| Sbjct: 3047115 cgaggctctcgagcgcctggttgacg 3047090
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Plus Query: 45 gtcgacgacgaagcggtagcgcacgtcgtt 74 ||||| ||||||||| |||||||||||||| Sbjct: 5462968 gtcgatgacgaagcgatagcgcacgtcgtt 5462997
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 44.1 bits (22), Expect = 0.16 Identities = 31/34 (91%) Strand = Plus / Minus Query: 39 ggcgacgtcgacgacgaagcggtagcgcacgtcg 72 ||||| ||||| ||||||||||||||| |||||| Sbjct: 2874171 ggcgatgtcgatgacgaagcggtagcggacgtcg 2874138
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 cccggcgacgtcgacgacgaag 57 |||||||||||||||||||||| Sbjct: 3144159 cccggcgacgtcgacgacgaag 3144138
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.16 Identities = 31/34 (91%) Strand = Plus / Plus Query: 39 ggcgacgtcgacgacgaagcggtagcgcacgtcg 72 ||||| ||||| |||||||||||| ||||||||| Sbjct: 1336242 ggcgaggtcgatgacgaagcggtaccgcacgtcg 1336275
>emb|AJ811963.1| Linum album mRNA for cinnamyl-alcohol dehydrogenase (cad gene) Length = 1291 Score = 44.1 bits (22), Expect = 0.16 Identities = 31/34 (91%) Strand = Plus / Minus Query: 168 ctcctccgtctcgtccatgctcccgatgaagctc 201 |||||||||||| | ||||||||| ||||||||| Sbjct: 1017 ctcctccgtctccttcatgctccctatgaagctc 984
>ref|XM_468459.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1155 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaag 57 ||||||||||||||||||||| Sbjct: 134 ccggcgacgtcgacgacgaag 114
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 agaacttgaggacctcctccgtctc 179 |||||||||||| |||||||||||| Sbjct: 549719 agaacttgaggaactcctccgtctc 549695
>ref|XM_362540.1| Magnaporthe grisea 70-15 hypothetical protein (MG08123.4) partial mRNA Length = 2508 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 tgtcgacgcagaacttgagga 166 ||||||||||||||||||||| Sbjct: 781 tgtcgacgcagaacttgagga 761
>ref|XM_567665.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNK01860) partial mRNA Length = 2845 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 agaacttgaggacctcctccgtctc 179 |||||||||||| |||||||||||| Sbjct: 2119 agaacttgaggaactcctccgtctc 2095
>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29 Length = 311000 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 52 acgaagcggtagcgcacgtcg 72 ||||||||||||||||||||| Sbjct: 9917 acgaagcggtagcgcacgtcg 9897
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaag 57 ||||||||||||||||||||| Sbjct: 93237 ccggcgacgtcgacgacgaag 93217
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 0.64 Identities = 24/25 (96%) Strand = Plus / Minus Query: 44 cgtcgacgacgaagcggtagcgcac 68 |||||| |||||||||||||||||| Sbjct: 158121 cgtcgatgacgaagcggtagcgcac 158097
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 42.1 bits (21), Expect = 0.64 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 ccggcgacgtcgacgacgaag 57 ||||||||||||||||||||| Sbjct: 3451 ccggcgacgtcgacgacgaag 3431
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 acgacgaagcggtagcgcacgtcg 72 |||||||||||| ||||||||||| Sbjct: 3515643 acgacgaagcggcagcgcacgtcg 3515620
>gb|AE009153.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 179 of 256 of the complete sequence Length = 12439 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 gtcgacgacgaagcggtagcgcacgtcg 72 ||||| |||||||||||| ||||||||| Sbjct: 11020 gtcgatgacgaagcggtaacgcacgtcg 10993
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 45 gtcgacgacgaagcggtagcgcacgtcg 72 ||||| |||||||||||| ||||||||| Sbjct: 1984029 gtcgatgacgaagcggtaacgcacgtcg 1984002
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 gaagcggtagcgcacgtcgt 73 |||||||||||||||||||| Sbjct: 2430432 gaagcggtagcgcacgtcgt 2430413
>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0040N23 Length = 101061 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cccggcgacgtcgacgacga 55 |||||||||||||||||||| Sbjct: 46167 cccggcgacgtcgacgacga 46148
>dbj|AP005554.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_A10 Length = 95161 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 ctaggttgctcccggcgacg 45 |||||||||||||||||||| Sbjct: 54908 ctaggttgctcccggcgacg 54889
>dbj|AK069775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028H13, full insert sequence Length = 703 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 cccggcgacgtcgacgacga 55 |||||||||||||||||||| Sbjct: 181 cccggcgacgtcgacgacga 162 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 802,530 Number of Sequences: 3902068 Number of extensions: 802530 Number of successful extensions: 56666 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54821 Number of HSP's gapped (non-prelim): 1839 length of query: 201 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 179 effective length of database: 17,147,199,772 effective search space: 3069348759188 effective search space used: 3069348759188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
