Clone Name | rbart25e03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_469909.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1682 Score = 313 bits (158), Expect = 3e-82 Identities = 260/294 (88%) Strand = Plus / Minus Query: 211 tcagaaggtggccttcttgagcgaggtgatggtgaccgaggacccgagcggcgaggaccc 270 ||||||||||||||||||||||||||||| |||||| || || ||||||| |||| || Sbjct: 1539 tcagaaggtggccttcttgagcgaggtgacggtgacagatgagccgagcgtggaggtgcc 1480 Query: 271 gacctgcacgtcgaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgat 330 ||||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||| Sbjct: 1479 gacctcgacgtcgaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgac 1420 Query: 331 gagcaccacgaagtccttgccggcgcactgcttgtcctgcagcgtcggcgtcgccgactc 390 |||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 1419 gagcacgacgaagtccttgccggcgcactgcttgtcgtgcagggtgggcgccgccgtctc 1360 Query: 391 tggcccgttggaccacacgacgtaccggagcagccgctcgccgtcctcgcccatgaacct 450 |||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| Sbjct: 1359 gggcccgttggaccacacgacgtggcggagcagccgcgcgccgtcctcgccgaggaacct 1300 Query: 451 gtcggggacgtactcctcggcgcgctggaacacccgcgggtccttggtcgccat 504 ||| || ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 1299 gtccggcacgtactcctccggccgcgcgaacacccgcgggtccttggtcgccat 1246
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 313 bits (158), Expect = 3e-82 Identities = 260/294 (88%) Strand = Plus / Plus Query: 211 tcagaaggtggccttcttgagcgaggtgatggtgaccgaggacccgagcggcgaggaccc 270 ||||||||||||||||||||||||||||| |||||| || || ||||||| |||| || Sbjct: 31461309 tcagaaggtggccttcttgagcgaggtgacggtgacagatgagccgagcgtggaggtgcc 31461368 Query: 271 gacctgcacgtcgaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgat 330 ||||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||| Sbjct: 31461369 gacctcgacgtcgaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgac 31461428 Query: 331 gagcaccacgaagtccttgccggcgcactgcttgtcctgcagcgtcggcgtcgccgactc 390 |||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 31461429 gagcacgacgaagtccttgccggcgcactgcttgtcgtgcagggtgggcgccgccgtctc 31461488 Query: 391 tggcccgttggaccacacgacgtaccggagcagccgctcgccgtcctcgcccatgaacct 450 |||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| Sbjct: 31461489 gggcccgttggaccacacgacgtggcggagcagccgcgcgccgtcctcgccgaggaacct 31461548 Query: 451 gtcggggacgtactcctcggcgcgctggaacacccgcgggtccttggtcgccat 504 ||| || ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 31461549 gtccggcacgtactcctccggccgcgcgaacacccgcgggtccttggtcgccat 31461602
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 313 bits (158), Expect = 3e-82 Identities = 260/294 (88%) Strand = Plus / Minus Query: 211 tcagaaggtggccttcttgagcgaggtgatggtgaccgaggacccgagcggcgaggaccc 270 ||||||||||||||||||||||||||||| |||||| || || ||||||| |||| || Sbjct: 131287 tcagaaggtggccttcttgagcgaggtgacggtgacagatgagccgagcgtggaggtgcc 131228 Query: 271 gacctgcacgtcgaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgat 330 ||||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||| Sbjct: 131227 gacctcgacgtcgaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgac 131168 Query: 331 gagcaccacgaagtccttgccggcgcactgcttgtcctgcagcgtcggcgtcgccgactc 390 |||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 131167 gagcacgacgaagtccttgccggcgcactgcttgtcgtgcagggtgggcgccgccgtctc 131108 Query: 391 tggcccgttggaccacacgacgtaccggagcagccgctcgccgtcctcgcccatgaacct 450 |||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| Sbjct: 131107 gggcccgttggaccacacgacgtggcggagcagccgcgcgccgtcctcgccgaggaacct 131048 Query: 451 gtcggggacgtactcctcggcgcgctggaacacccgcgggtccttggtcgccat 504 ||| || ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 131047 gtccggcacgtactcctccggccgcgcgaacacccgcgggtccttggtcgccat 130994
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 313 bits (158), Expect = 3e-82 Identities = 260/294 (88%) Strand = Plus / Minus Query: 211 tcagaaggtggccttcttgagcgaggtgatggtgaccgaggacccgagcggcgaggaccc 270 ||||||||||||||||||||||||||||| |||||| || || ||||||| |||| || Sbjct: 34491 tcagaaggtggccttcttgagcgaggtgacggtgacagatgagccgagcgtggaggtgcc 34432 Query: 271 gacctgcacgtcgaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgat 330 ||||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||| Sbjct: 34431 gacctcgacgtcgaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgac 34372 Query: 331 gagcaccacgaagtccttgccggcgcactgcttgtcctgcagcgtcggcgtcgccgactc 390 |||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 34371 gagcacgacgaagtccttgccggcgcactgcttgtcgtgcagggtgggcgccgccgtctc 34312 Query: 391 tggcccgttggaccacacgacgtaccggagcagccgctcgccgtcctcgcccatgaacct 450 |||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| Sbjct: 34311 gggcccgttggaccacacgacgtggcggagcagccgcgcgccgtcctcgccgaggaacct 34252 Query: 451 gtcggggacgtactcctcggcgcgctggaacacccgcgggtccttggtcgccat 504 ||| || ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 34251 gtccggcacgtactcctccggccgcgcgaacacccgcgggtccttggtcgccat 34198
>dbj|AB116527.1| Oryza sativa (japonica cultivar-group) aos mRNA for allene oxide synthase, complete cds Length = 1918 Score = 313 bits (158), Expect = 3e-82 Identities = 260/294 (88%) Strand = Plus / Minus Query: 211 tcagaaggtggccttcttgagcgaggtgatggtgaccgaggacccgagcggcgaggaccc 270 ||||||||||||||||||||||||||||| |||||| || || ||||||| |||| || Sbjct: 1662 tcagaaggtggccttcttgagcgaggtgacggtgacagatgagccgagcgtggaggtgcc 1603 Query: 271 gacctgcacgtcgaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgat 330 ||||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||| Sbjct: 1602 gacctcgacgtcgaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgac 1543 Query: 331 gagcaccacgaagtccttgccggcgcactgcttgtcctgcagcgtcggcgtcgccgactc 390 |||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 1542 gagcacgacgaagtccttgccggcgcactgcttgtcgtgcagggtgggcgccgccgtctc 1483 Query: 391 tggcccgttggaccacacgacgtaccggagcagccgctcgccgtcctcgcccatgaacct 450 |||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| Sbjct: 1482 gggcccgttggaccacacgacgtggcggagcagccgcgcgccgtcctcgccgaggaacct 1423 Query: 451 gtcggggacgtactcctcggcgcgctggaacacccgcgggtccttggtcgccat 504 ||| || ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 1422 gtccggcacgtactcctccggccgcgcgaacacccgcgggtccttggtcgccat 1369
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 313 bits (158), Expect = 3e-82 Identities = 260/294 (88%) Strand = Plus / Plus Query: 211 tcagaaggtggccttcttgagcgaggtgatggtgaccgaggacccgagcggcgaggaccc 270 ||||||||||||||||||||||||||||| |||||| || || ||||||| |||| || Sbjct: 31551825 tcagaaggtggccttcttgagcgaggtgacggtgacagatgagccgagcgtggaggtgcc 31551884 Query: 271 gacctgcacgtcgaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgat 330 ||||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||| Sbjct: 31551885 gacctcgacgtcgaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgac 31551944 Query: 331 gagcaccacgaagtccttgccggcgcactgcttgtcctgcagcgtcggcgtcgccgactc 390 |||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 31551945 gagcacgacgaagtccttgccggcgcactgcttgtcgtgcagggtgggcgccgccgtctc 31552004 Query: 391 tggcccgttggaccacacgacgtaccggagcagccgctcgccgtcctcgcccatgaacct 450 |||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| Sbjct: 31552005 gggcccgttggaccacacgacgtggcggagcagccgcgcgccgtcctcgccgaggaacct 31552064 Query: 451 gtcggggacgtactcctcggcgcgctggaacacccgcgggtccttggtcgccat 504 ||| || ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 31552065 gtccggcacgtactcctccggccgcgcgaacacccgcgggtccttggtcgccat 31552118
>dbj|AK068620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K19, full insert sequence Length = 1997 Score = 313 bits (158), Expect = 3e-82 Identities = 260/294 (88%) Strand = Plus / Minus Query: 211 tcagaaggtggccttcttgagcgaggtgatggtgaccgaggacccgagcggcgaggaccc 270 ||||||||||||||||||||||||||||| |||||| || || ||||||| |||| || Sbjct: 1756 tcagaaggtggccttcttgagcgaggtgacggtgacagatgagccgagcgtggaggtgcc 1697 Query: 271 gacctgcacgtcgaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgat 330 ||||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||| Sbjct: 1696 gacctcgacgtcgaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgac 1637 Query: 331 gagcaccacgaagtccttgccggcgcactgcttgtcctgcagcgtcggcgtcgccgactc 390 |||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 1636 gagcacgacgaagtccttgccggcgcactgcttgtcgtgcagggtgggcgccgccgtctc 1577 Query: 391 tggcccgttggaccacacgacgtaccggagcagccgctcgccgtcctcgcccatgaacct 450 |||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| Sbjct: 1576 gggcccgttggaccacacgacgtggcggagcagccgcgcgccgtcctcgccgaggaacct 1517 Query: 451 gtcggggacgtactcctcggcgcgctggaacacccgcgggtccttggtcgccat 504 ||| || ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 1516 gtccggcacgtactcctccggccgcgcgaacacccgcgggtccttggtcgccat 1463
>dbj|AK066137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054B10, full insert sequence Length = 3951 Score = 313 bits (158), Expect = 3e-82 Identities = 260/294 (88%) Strand = Plus / Plus Query: 211 tcagaaggtggccttcttgagcgaggtgatggtgaccgaggacccgagcggcgaggaccc 270 ||||||||||||||||||||||||||||| |||||| || || ||||||| |||| || Sbjct: 1716 tcagaaggtggccttcttgagcgaggtgacggtgacagatgagccgagcgtggaggtgcc 1775 Query: 271 gacctgcacgtcgaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgat 330 ||||| ||||||||||||||||| |||||||||| |||| ||| |||||||||||||| Sbjct: 1776 gacctcgacgtcgaaggagtcgtatcggaggaagagctcgacgaggaggaggcgcgcgac 1835 Query: 331 gagcaccacgaagtccttgccggcgcactgcttgtcctgcagcgtcggcgtcgccgactc 390 |||||| ||||||||||||||||||||||||||||| ||||| || |||| ||||| ||| Sbjct: 1836 gagcacgacgaagtccttgccggcgcactgcttgtcgtgcagggtgggcgccgccgtctc 1895 Query: 391 tggcccgttggaccacacgacgtaccggagcagccgctcgccgtcctcgcccatgaacct 450 |||||||||||||||||||||| |||||||||||| ||||||||||||| | |||||| Sbjct: 1896 gggcccgttggaccacacgacgtggcggagcagccgcgcgccgtcctcgccgaggaacct 1955 Query: 451 gtcggggacgtactcctcggcgcgctggaacacccgcgggtccttggtcgccat 504 ||| || ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 1956 gtccggcacgtactcctccggccgcgcgaacacccgcgggtccttggtcgccat 2009
>gb|AY488135.1| Zea mays allene oxide synthase (aos) mRNA, complete cds Length = 1768 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 289 gtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaagtcctt 348 ||||||||||||||||| |||| ||| |||||| | ||| ||||||||||||| ||| Sbjct: 1467 gtcgtagcggaggaagagctcgacgaggaggagcctgccgaccagcaccacgaagttctt 1408 Query: 349 gccggcgcactgcttgt 365 |||| ||||||||||| Sbjct: 1407 cccggggcactgcttgt 1391
>gb|AY104188.1| Zea mays PCO060855 mRNA sequence Length = 1768 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 289 gtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaagtcctt 348 ||||||||||||||||| |||| ||| |||||| | ||| ||||||||||||| ||| Sbjct: 1467 gtcgtagcggaggaagagctcgacgaggaggagcctgccgaccagcaccacgaagttctt 1408 Query: 349 gccggcgcactgcttgt 365 |||| ||||||||||| Sbjct: 1407 cccggggcactgcttgt 1391
>gb|DQ428532.1| Sorghum propinquum locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428531.1| Sorghum bicolor voucher PI585454 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428530.1| Sorghum bicolor voucher PI267539 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428529.1| Sorghum bicolor voucher PI267408 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428528.1| Sorghum bicolor voucher PI221607 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428527.1| Sorghum bicolor voucher PI152702 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428525.1| Sorghum bicolor voucher NSL87902 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428524.1| Sorghum bicolor voucher NSL87666 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428523.1| Sorghum bicolor voucher NSL77217 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428522.1| Sorghum bicolor voucher NSL77034 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428519.1| Sorghum bicolor voucher NSL55243 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428518.1| Sorghum bicolor voucher NSL51365 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428516.1| Sorghum bicolor voucher NSL51030a locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428515.1| Sorghum bicolor voucher NSL50875 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>gb|DQ428514.1| Sorghum bicolor voucher BTx623 locus PRC1203 genomic sequence Length = 518 Score = 54.0 bits (27), Expect = 5e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 283 gaaggagtcgtagcggaggaagatctcggcgacgaggaggcgcgcgatgagcaccacgaa 342 ||||| |||||| |||||||||| |||| ||| || ||| | ||| ||||||||| || Sbjct: 322 gaaggtgtcgtaacggaggaagagctcgacgaggaagagcctgccgacgagcaccacaaa 263 Query: 343 gtccttgccggcgcactgcttgt 365 || |||||||| ||||||||||| Sbjct: 262 gttcttgccggggcactgcttgt 240
>ref|XM_533160.2| PREDICTED: Canis familiaris similar to B5 receptor (LOC475950), mRNA Length = 1266 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 200 cagaagagaactcagaaggtggccttc 226 |||||||||||||||||||||| |||| Sbjct: 159 cagaagagaactcagaaggtggacttc 185
>gb|DQ428526.1| Sorghum bicolor voucher NSL92371 locus PRC1203 genomic sequence Length = 518 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 331 gagcaccacgaagtccttgccggcgcactgcttgt 365 ||||||||| |||| |||||||| ||||||||||| Sbjct: 274 gagcaccacaaagttcttgccggggcactgcttgt 240
>gb|DQ428521.1| Sorghum bicolor voucher NSL56174 locus PRC1203 genomic sequence Length = 518 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 331 gagcaccacgaagtccttgccggcgcactgcttgt 365 ||||||||| |||| |||||||| ||||||||||| Sbjct: 274 gagcaccacaaagttcttgccggggcactgcttgt 240
>gb|DQ428520.1| Sorghum bicolor voucher NSL56003 locus PRC1203 genomic sequence Length = 518 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 331 gagcaccacgaagtccttgccggcgcactgcttgt 365 ||||||||| |||| |||||||| ||||||||||| Sbjct: 274 gagcaccacaaagttcttgccggggcactgcttgt 240
>gb|DQ428517.1| Sorghum bicolor voucher NSL51030b locus PRC1203 genomic sequence Length = 518 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 331 gagcaccacgaagtccttgccggcgcactgcttgt 365 ||||||||| |||| |||||||| ||||||||||| Sbjct: 274 gagcaccacaaagttcttgccggggcactgcttgt 240
>emb|AJ316566.1|PPA316566 Physcomitrella patens mRNA for allene oxide synthase (aos gene) Length = 2013 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 335 accacgaagtccttgccggcgcactgcttgt 365 ||||| |||||||| |||||||||||||||| Sbjct: 1342 accaccaagtcctttccggcgcactgcttgt 1312
>gb|AY703450.1| Citrullus lanatus 13-hydroperoxide lyase mRNA, complete cds Length = 1632 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 332 agcaccacgaagtccttgccggcgcactgcttgt 365 |||||||| || ||||| |||||||||||||||| Sbjct: 1352 agcaccaccaaatccttcccggcgcactgcttgt 1319
>emb|AJ318870.1|HVU318870 Hordeum vulgare mRNA for fatty acid hydroperoxide lyase (13-hpl gene) Length = 1673 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 289 gtcgtagcggaggaagatctcggcgacgag 318 |||||||||| |||||| |||||||||||| Sbjct: 1434 gtcgtagcggcggaagagctcggcgacgag 1405
>gb|U00428.1|U00428 Linum usitatissimum allene oxide synthase mRNA complete cds Length = 2038 Score = 44.1 bits (22), Expect = 0.44 Identities = 61/74 (82%) Strand = Plus / Minus Query: 334 caccacgaagtccttgccggcgcactgcttgtcctgcagcgtcggcgtcgccgactctgg 393 ||||||||| ||||| || ||||||||||||| | || |||||||| ||| ||| || Sbjct: 1736 caccacgaaatccttccctgcgcactgcttgttcgccacgctcggcgtctccgtctccgg 1677 Query: 394 cccgttggaccaca 407 |||||| ||||||| Sbjct: 1676 cccgttcgaccaca 1663
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 332 agcaccacgaagtccttgccggcgc 356 |||||||||||||| |||||||||| Sbjct: 782892 agcaccacgaagtcgttgccggcgc 782868
>gb|AC125106.3| Mus musculus BAC clone RP24-221A9 from chromosome 9, complete sequence Length = 159785 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 tttgttacacaaatcctccaa 81 ||||||||||||||||||||| Sbjct: 43525 tttgttacacaaatcctccaa 43505
>gb|AE014838.1| Plasmodium falciparum 3D7 chromosome 11 section 3 of 8 of the complete sequence Length = 250029 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 95 tctatcacatgcatagtgtaa 115 ||||||||||||||||||||| Sbjct: 208085 tctatcacatgcatagtgtaa 208105
>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16 Length = 123385 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 agcagccgctcgccgtcctcg 439 ||||||||||||||||||||| Sbjct: 14135 agcagccgctcgccgtcctcg 14115
>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14 Length = 255260 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 419 agcagccgctcgccgtcctcg 439 ||||||||||||||||||||| Sbjct: 149963 agcagccgctcgccgtcctcg 149943
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 419 agcagccgctcgccgtcctcg 439 ||||||||||||||||||||| Sbjct: 133674 agcagccgctcgccgtcctcg 133694
>gb|U24241.2|SCU24241 Sorangium cellulosum acyl-CoA dehydrogenase (sorE), beta-hydroxybutyryl-CoA dehydrogenase (sorD), putative methoxymalonyl-CoA synthase (sorC), reductase (sorR), soraphen polyketide synthase A (sorA), soraphen polyketide synthase B (sorB), O-methyltransferase (sorM), beta-mannanase, and xylanse-arabinofuranosidase bifunctional enzyme genes, complete cds; and unknown genes Length = 67523 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 310 ggcgacgaggaggcgcgcgatgagc 334 |||||||||| |||||||||||||| Sbjct: 32018 ggcgacgaggtggcgcgcgatgagc 31994
>gb|AC005730.1|AC005730 Homo sapiens chromosome 17, clone hRPK.209_D_14, complete sequence Length = 162025 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 213 agaaggtggccttcttgagcgaggt 237 ||||||||||||||||| ||||||| Sbjct: 83979 agaaggtggccttcttgcgcgaggt 84003
>gb|AY496432.1| Apis mellifera defensin/royalisin precursor, gene, complete cds Length = 2012 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 aaaagaaatttttgttacacaaat 74 ||||||||||||||| |||||||| Sbjct: 198 aaaagaaatttttgtcacacaaat 221
>gb|AC160873.4| Colobus guereza clone CH272-426J14, complete sequence Length = 196315 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aggaaaagaaatttttgtta 67 |||||||||||||||||||| Sbjct: 131003 aggaaaagaaatttttgtta 130984
>ref|XM_474158.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 624 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 cggcgacgaggaggcgcgcg 328 |||||||||||||||||||| Sbjct: 148 cggcgacgaggaggcgcgcg 129
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 ctgcagcgtcggcgtcgccg 386 |||||||||||||||||||| Sbjct: 20310 ctgcagcgtcggcgtcgccg 20329
>ref|XM_507434.1| PREDICTED Oryza sativa (japonica cultivar-group), P0576F08.10 mRNA Length = 1378 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ctcgccgtcctcgcccatgaacct 450 ||||| |||||||||||||||||| Sbjct: 926 ctcgctgtcctcgcccatgaacct 903
>ref|XM_463983.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1312 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ctcgccgtcctcgcccatgaacct 450 ||||| |||||||||||||||||| Sbjct: 853 ctcgctgtcctcgcccatgaacct 830
>ref|XM_506704.2| PREDICTED Oryza sativa (japonica cultivar-group), P0576F08.10 mRNA Length = 1338 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ctcgccgtcctcgcccatgaacct 450 ||||| |||||||||||||||||| Sbjct: 853 ctcgctgtcctcgcccatgaacct 830
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aggaaaagaaatttttgtta 67 |||||||||||||||||||| Sbjct: 1851407 aggaaaagaaatttttgtta 1851388
>ref|XM_591758.2| PREDICTED: Bos taurus similar to pleckstrin homology-like domain, family A, member 1 (LOC540135), mRNA Length = 1188 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 419 agcagccgctcgccgtcctcgccc 442 ||||||||| |||||||||||||| Sbjct: 359 agcagccgcgcgccgtcctcgccc 336
>gb|AC087103.3| Papio anubis clone RP41-353B7, complete sequence Length = 172661 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aggaaaagaaatttttgtta 67 |||||||||||||||||||| Sbjct: 143652 aggaaaagaaatttttgtta 143633
>gb|AC126245.3| Mus musculus BAC clone RP24-354D8 from chromosome 17, complete sequence Length = 160440 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 agaagagaactcagaaggtg 220 |||||||||||||||||||| Sbjct: 134475 agaagagaactcagaaggtg 134456
>emb|AL449264.18| Human DNA sequence from clone RP11-485H8 on chromosome 1 Contains the 5' end of the CASQ2 gene for calsequestrin 2 (cardiac muscle), the NHLH2 gene for nescient helix loop helix 2, a heterogeneous nuclear ribonucleoprotein A1 (HNRPA1) pseudogene and two CpG islands, complete sequence Length = 164655 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 aactcagaaggtggccttct 227 |||||||||||||||||||| Sbjct: 26462 aactcagaaggtggccttct 26443
>gb|AC146674.3| Callithrix jacchus clone CH259-338M13, complete sequence Length = 228448 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aggaaaagaaatttttgtta 67 |||||||||||||||||||| Sbjct: 127452 aggaaaagaaatttttgtta 127433
>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06, complete sequence Length = 151506 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cggcgacgaggaggcgcgcg 328 |||||||||||||||||||| Sbjct: 119018 cggcgacgaggaggcgcgcg 119037
>gb|BC065349.1| Danio rerio zgc:77358, mRNA (cDNA clone MGC:77358 IMAGE:6968467), complete cds Length = 1220 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 tcggcgcgctggaacacccgcggg 490 ||||||||| |||||||||||||| Sbjct: 778 tcggcgcgcaggaacacccgcggg 755
>ref|NM_205632.1| Danio rerio zgc:77358 (zgc:77358), mRNA Length = 1220 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 467 tcggcgcgctggaacacccgcggg 490 ||||||||| |||||||||||||| Sbjct: 778 tcggcgcgcaggaacacccgcggg 755
>gb|AF081954.1| Cucumis melo allene oxide synthase (AOS) mRNA, complete cds Length = 1711 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 gtcgaaggagtcgtagcggaggaa 303 ||||||||||||||| |||||||| Sbjct: 1527 gtcgaaggagtcgtaacggaggaa 1504
>gb|AC173452.3| Papio anubis clone RP41-379N3, complete sequence Length = 93212 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aggaaaagaaatttttgtta 67 |||||||||||||||||||| Sbjct: 42951 aggaaaagaaatttttgtta 42932
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cggcgacgaggaggcgcgcg 328 |||||||||||||||||||| Sbjct: 33346757 cggcgacgaggaggcgcgcg 33346776
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 ctcgccgtcctcgcccatgaacct 450 ||||| |||||||||||||||||| Sbjct: 1481724 ctcgctgtcctcgcccatgaacct 1481747
>gb|AF532117.1| Mus musculus strain 129/SvJ BAC clone citb9k22 from the MHC region, complete sequence Length = 173288 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 agaagagaactcagaaggtg 220 |||||||||||||||||||| Sbjct: 108858 agaagagaactcagaaggtg 108839
>gb|DP000026.1| Pongo pygmaeus target 1 genomic scaffold Length = 1819346 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aggaaaagaaatttttgtta 67 |||||||||||||||||||| Sbjct: 1704897 aggaaaagaaatttttgtta 1704878
>gb|AF165214.1|AF165214 Bacteriophage D3, complete genome Length = 56425 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 acggcggtcggccacggcca 201 |||||||||||||||||||| Sbjct: 43109 acggcggtcggccacggcca 43128
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0576F08 Length = 135314 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 ctcgccgtcctcgcccatgaacct 450 ||||| |||||||||||||||||| Sbjct: 45145 ctcgctgtcctcgcccatgaacct 45168
>dbj|AK119901.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-D02, full insert sequence Length = 1359 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ctcgccgtcctcgcccatgaacct 450 ||||| |||||||||||||||||| Sbjct: 853 ctcgctgtcctcgcccatgaacct 830
>dbj|AK111954.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-D05, full insert sequence Length = 937 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ctcgccgtcctcgcccatgaacct 450 ||||| |||||||||||||||||| Sbjct: 478 ctcgctgtcctcgcccatgaacct 455
>dbj|AK111795.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105K22, full insert sequence Length = 1378 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ctcgccgtcctcgcccatgaacct 450 ||||| |||||||||||||||||| Sbjct: 926 ctcgctgtcctcgcccatgaacct 903
>dbj|AK111420.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-G08, full insert sequence Length = 977 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 cggcgacgaggaggcgcgcg 328 |||||||||||||||||||| Sbjct: 179 cggcgacgaggaggcgcgcg 160
>dbj|AK104468.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D04, full insert sequence Length = 1312 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 427 ctcgccgtcctcgcccatgaacct 450 ||||| |||||||||||||||||| Sbjct: 853 ctcgctgtcctcgcccatgaacct 830
>gb|AC165188.3| Aotus nancymaae clone CH258-452D17, complete sequence Length = 81011 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 aggaaaagaaatttttgtta 67 |||||||||||||||||||| Sbjct: 7969 aggaaaagaaatttttgtta 7950
>dbj|AK067094.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098P05, full insert sequence Length = 912 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 cggcgacgaggaggcgcgcg 328 |||||||||||||||||||| Sbjct: 196 cggcgacgaggaggcgcgcg 177
>gb|AC154819.2| Mus musculus BAC clone RP24-535A1 from 17, complete sequence Length = 165136 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 agaagagaactcagaaggtg 220 |||||||||||||||||||| Sbjct: 74922 agaagagaactcagaaggtg 74903
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 423 gccgctcgccgtcctcgcccatga 446 ||||||||||| |||||||||||| Sbjct: 39381 gccgctcgccggcctcgcccatga 39358
>emb|Z83317.1|CEF13G11 Caenorhabditis elegans Cosmid F13G11, complete sequence Length = 38225 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 gaaaagaaatttttgttacacaaa 73 ||||||||||||||||| |||||| Sbjct: 6355 gaaaagaaatttttgtttcacaaa 6378
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 aggaggcgcgcgatgagcac 336 |||||||||||||||||||| Sbjct: 1893373 aggaggcgcgcgatgagcac 1893392 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,683,456 Number of Sequences: 3902068 Number of extensions: 3683456 Number of successful extensions: 71412 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 77 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70914 Number of HSP's gapped (non-prelim): 496 length of query: 504 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 482 effective length of database: 17,147,199,772 effective search space: 8264950290104 effective search space used: 8264950290104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)