ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart25e01 |
|---|---|
| Clone Library Name | barley_pub |
>RS3_ICTPU (Q90YS2) 40S ribosomal protein S3| Length = 245 Score = 122 bits (306), Expect = 5e-28 Identities = 60/77 (77%), Positives = 63/77 (81%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+G Sbjct: 140 GKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIG 199 Query: 310 PTTPLPDLVTIHPPKEE 260 P PLPD V+I PKEE Sbjct: 200 PKKPLPDHVSIVEPKEE 216
>RS3_RAT (P62909) 40S ribosomal protein S3| Length = 243 Score = 121 bits (303), Expect = 1e-27 Identities = 59/77 (76%), Positives = 63/77 (81%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+G Sbjct: 140 GKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIG 199 Query: 310 PTTPLPDLVTIHPPKEE 260 P PLPD V+I PK+E Sbjct: 200 PKKPLPDHVSIVEPKDE 216
>RS3_MOUSE (P62908) 40S ribosomal protein S3| Length = 243 Score = 121 bits (303), Expect = 1e-27 Identities = 59/77 (76%), Positives = 63/77 (81%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+G Sbjct: 140 GKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIG 199 Query: 310 PTTPLPDLVTIHPPKEE 260 P PLPD V+I PK+E Sbjct: 200 PKKPLPDHVSIVEPKDE 216
>RS32_XENLA (P47835) 40S ribosomal protein S3-B (S1B)| Length = 246 Score = 121 bits (303), Expect = 1e-27 Identities = 59/77 (76%), Positives = 63/77 (81%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+G Sbjct: 140 GKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIG 199 Query: 310 PTTPLPDLVTIHPPKEE 260 P PLPD V+I PK+E Sbjct: 200 PKKPLPDHVSIVEPKDE 216
>RS31_XENLA (P02350) 40S ribosomal protein S3-A (S1A)| Length = 246 Score = 121 bits (303), Expect = 1e-27 Identities = 59/77 (76%), Positives = 63/77 (81%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+G Sbjct: 140 GKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIG 199 Query: 310 PTTPLPDLVTIHPPKEE 260 P PLPD V+I PK+E Sbjct: 200 PKKPLPDHVSIVEPKDE 216
>RS3_PONPY (Q5R465) 40S ribosomal protein S3| Length = 243 Score = 120 bits (302), Expect = 2e-27 Identities = 59/77 (76%), Positives = 63/77 (81%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+G Sbjct: 140 GKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIG 199 Query: 310 PTTPLPDLVTIHPPKEE 260 P PLPD V+I PK+E Sbjct: 200 PKKPLPDHVSIVEPKDE 216
>RS3_HUMAN (P23396) 40S ribosomal protein S3| Length = 243 Score = 120 bits (302), Expect = 2e-27 Identities = 59/77 (76%), Positives = 63/77 (81%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+G Sbjct: 140 GKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIG 199 Query: 310 PTTPLPDLVTIHPPKEE 260 P PLPD V+I PK+E Sbjct: 200 PKKPLPDHVSIVEPKDE 216
>RS3_BOVIN (Q3T169) 40S ribosomal protein S3| Length = 243 Score = 120 bits (302), Expect = 2e-27 Identities = 59/77 (76%), Positives = 63/77 (81%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+G Sbjct: 140 GKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIG 199 Query: 310 PTTPLPDLVTIHPPKEE 260 P PLPD V+I PK+E Sbjct: 200 PKKPLPDHVSIVEPKDE 216
>RS3_AMBME (P79891) 40S ribosomal protein S3| Length = 253 Score = 120 bits (302), Expect = 2e-27 Identities = 59/77 (76%), Positives = 63/77 (81%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG PVN Y+D AVRHVLLRQGVLGIKVKIML WDP GK+G Sbjct: 140 GKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLAWDPSGKIG 199 Query: 310 PTTPLPDLVTIHPPKEE 260 P PLPD V+I PK+E Sbjct: 200 PKKPLPDHVSIVEPKDE 216
>RS3_DROME (Q06559) 40S ribosomal protein S3| Length = 246 Score = 114 bits (286), Expect = 1e-25 Identities = 55/83 (66%), Positives = 63/83 (75%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGVLGIKVK+ML +DPK K+G Sbjct: 142 GKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIG 201 Query: 310 PTTPLPDLVTIHPPKEEDELRPP 242 P PLPD V++ PKEE P Sbjct: 202 PKKPLPDNVSVVEPKEEKIYETP 224
>RS3_MANSE (P48153) 40S ribosomal protein S3| Length = 243 Score = 110 bits (276), Expect = 2e-24 Identities = 57/98 (58%), Positives = 67/98 (68%), Gaps = 1/98 (1%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAKSMKF DG MI SG P N+Y++ A RHVLLRQGVLGIKVKIML WD +GK G Sbjct: 141 GKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNG 200 Query: 310 PTTPLPDLVTIHPPKEED-ELRPPALIEV*TPSSASRP 200 P P PD + + PK+E L P + I P+ +P Sbjct: 201 PKKPQPDHILVTEPKDEPAPLEPTSDIRSLAPAPLPQP 238
>RS3_CAEEL (P48152) 40S ribosomal protein S3| Length = 247 Score = 106 bits (264), Expect = 4e-23 Identities = 53/77 (68%), Positives = 60/77 (77%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLR QRAK+MKF DG MI SG PVN+YI AVRHV LRQGV+GIKVKIML +DP+G+ G Sbjct: 142 GKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNG 201 Query: 310 PTTPLPDLVTIHPPKEE 260 P LPD V I P+EE Sbjct: 202 PRNALPDHVQIVEPQEE 218
>RS3_YEAST (P05750) 40S ribosomal protein S3 (YS3) (RP13)| Length = 239 Score = 103 bits (256), Expect = 3e-22 Identities = 54/85 (63%), Positives = 65/85 (76%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLRA RAK+MKF DG++I SGQPVN++ID A RHVL+RQGVLGIKVKIM D K + G Sbjct: 139 GKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKVKIMRD-PAKSRTG 197 Query: 310 PTTPLPDLVTIHPPKEEDELRPPAL 236 P LPD VTI PKEE+ + P++ Sbjct: 198 PKA-LPDAVTIIEPKEEEPILAPSV 221
>RS3_SCHPO (O60128) 40S ribosomal protein S3| Length = 249 Score = 99.0 bits (245), Expect = 6e-21 Identities = 51/83 (61%), Positives = 61/83 (73%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKLRA RAKSMKF DG+MI SGQP ++ID+A RHVLLRQGVLG+KVKIML P+ K Sbjct: 142 GKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGVLGVKVKIML---PEPKTR 198 Query: 310 PTTPLPDLVTIHPPKEEDELRPP 242 LPD+V + PKEE+ + P Sbjct: 199 QKKSLPDIVVVLDPKEEEPITKP 221
>RS3_ENCCU (Q8SQM3) 40S ribosomal protein S3| Length = 228 Score = 88.2 bits (217), Expect = 1e-17 Identities = 42/76 (55%), Positives = 55/76 (72%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL+ QRAKS+KF+DG +I SG V +YI+ V +QGV+GI+V+IML +DP+G LG Sbjct: 151 GKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLG 210 Query: 310 PTTPLPDLVTIHPPKE 263 P PLPD +TI P E Sbjct: 211 PNYPLPDRITILEPSE 226
>RS3_PYRHO (O59424) 30S ribosomal protein S3P| Length = 210 Score = 50.1 bits (118), Expect = 3e-06 Identities = 28/80 (35%), Positives = 39/80 (48%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL +RAKS++F GY+ G P + LL+ GV+G+KV IM Sbjct: 134 GKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------P 184 Query: 310 PTTPLPDLVTIHPPKEEDEL 251 P LPD + I E+E+ Sbjct: 185 PDARLPDEIEIVEKPAEEEV 204
>RS3_PYRAB (Q9V1U1) 30S ribosomal protein S3P| Length = 210 Score = 49.7 bits (117), Expect = 4e-06 Identities = 28/80 (35%), Positives = 39/80 (48%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL +RAKS++F GY+ G P + LL+ GV+G+KV IM Sbjct: 134 GKLTGERAKSVRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------P 184 Query: 310 PTTPLPDLVTIHPPKEEDEL 251 P LPD + I E+E+ Sbjct: 185 PDARLPDEIEIIEKPVEEEV 204
>RS3_PYRFU (Q8U004) 30S ribosomal protein S3P| Length = 210 Score = 49.3 bits (116), Expect = 6e-06 Identities = 28/80 (35%), Positives = 39/80 (48%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL +RAKS++F GY+ G P + LL+ GV+G+KV IM Sbjct: 134 GKLTGERAKSIRFYQGYLAKVGNPAETLVSKGYAQALLKLGVIGVKVAIM---------P 184 Query: 310 PTTPLPDLVTIHPPKEEDEL 251 P LPD + I E+E+ Sbjct: 185 PGARLPDEIEIIEKPVEEEV 204
>RS3_METKA (Q8TX35) 30S ribosomal protein S3P| Length = 227 Score = 48.1 bits (113), Expect = 1e-05 Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 1/82 (1%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL RA++ KF +G + G+P +EY+ + + G +G+ V+IM Sbjct: 142 GKLIGARARTEKFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRIM---------P 192 Query: 310 PTTPLPDLVTIHPPKE-EDELR 248 P LPD + I PP+E EDEL+ Sbjct: 193 PDVELPDELEIRPPEEVEDELK 214
>RS3_PYRKO (Q5JDH5) 30S ribosomal protein S3P| Length = 209 Score = 48.1 bits (113), Expect = 1e-05 Identities = 27/78 (34%), Positives = 37/78 (47%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL +RAKS++F GY+ G P + L+ GV+G+KV IM Sbjct: 134 GKLTGERAKSVRFYQGYLAKVGNPAETLVSRGYAQAQLKLGVIGVKVSIM---------P 184 Query: 310 PTTPLPDLVTIHPPKEED 257 P LPD + I EE+ Sbjct: 185 PDAKLPDEIEIKEIVEEE 202
>RS3_METTH (O26116) 30S ribosomal protein S3P| Length = 258 Score = 47.8 bits (112), Expect = 2e-05 Identities = 27/75 (36%), Positives = 39/75 (52%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GK+R R+ + KF DGY+ G+P +++ V L+ GVLG+ V+IM Sbjct: 133 GKIRGARSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVRIM---------P 183 Query: 310 PTTPLPDLVTIHPPK 266 P LPD V I P+ Sbjct: 184 PDVVLPDKVEIEDPR 198
>RS3_METBF (Q46GA1) 30S ribosomal protein S3P| Length = 311 Score = 47.4 bits (111), Expect = 2e-05 Identities = 28/76 (36%), Positives = 37/76 (48%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL R++ KF DGY+ SG PV+E +D + + G LG KV+I + Sbjct: 134 GKLTGARSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKVRI---------IQ 184 Query: 310 PTTPLPDLVTIHPPKE 263 P LPD T P E Sbjct: 185 PGVVLPDSYTTTEPSE 200
>RS3_METMA (Q8PV44) 30S ribosomal protein S3P| Length = 307 Score = 46.6 bits (109), Expect = 4e-05 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 1/97 (1%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL R++ KF DGY+ SG PV E +D + + G LG KV+I + Sbjct: 134 GKLTGARSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKVRI---------IQ 184 Query: 310 PTTPLPDLVTIHPPKE-EDELRPPALIEV*TPSSASR 203 P LPD + E E+ PA +V P+ A + Sbjct: 185 PGVVLPDSYKVRESVEIEEPAEKPAEKQVEKPAVAPK 221
>RS3_METJA (P54034) 30S ribosomal protein S3P| Length = 208 Score = 46.2 bits (108), Expect = 5e-05 Identities = 29/81 (35%), Positives = 41/81 (50%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL +RA++ KF GYM G+P E +D + GV+G+ VKIM Sbjct: 133 GKLTGERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVKIM---------R 183 Query: 310 PTTPLPDLVTIHPPKEEDELR 248 P LPD + I KE+ E++ Sbjct: 184 PDVLLPDEIII---KEDAEVK 201
>RS3_METMP (Q6LXE7) 30S ribosomal protein S3P| Length = 211 Score = 45.4 bits (106), Expect = 8e-05 Identities = 24/71 (33%), Positives = 38/71 (53%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL +R+++ KF DGYM G+P ++ + + L+ G++G+ VKIM Sbjct: 133 GKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIM---------R 183 Query: 310 PTTPLPDLVTI 278 P LPD + I Sbjct: 184 PDVSLPDEIVI 194
>RS3_METAC (Q8TRU1) 30S ribosomal protein S3P| Length = 318 Score = 45.1 bits (105), Expect = 1e-04 Identities = 27/82 (32%), Positives = 41/82 (50%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL R++ KF DGY+ SG PV E +D + + G LG KV+I+ P L Sbjct: 134 GKLTGARSRVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKVRII---QPGVVLP 190 Query: 310 PTTPLPDLVTIHPPKEEDELRP 245 + + + V + P E+ +P Sbjct: 191 DSYKVRESVEVEEPAEKPAEKP 212
>RS3_SULAC (Q4JB46) 30S ribosomal protein S3P| Length = 231 Score = 43.5 bits (101), Expect = 3e-04 Identities = 21/49 (42%), Positives = 32/49 (65%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 344 GKL ++RAK K K+G + SGQ + + ID A+ +L+ GV G++V I Sbjct: 135 GKLTSERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVVI 183
>RS3_SULSO (Q9UXA0) 30S ribosomal protein S3P| Length = 229 Score = 43.1 bits (100), Expect = 4e-04 Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 2/73 (2%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIM--LDWDPKGK 317 GKL +RA+ K K+G + SGQ + + ID A+ +L+ G+ G++V I L + K Sbjct: 135 GKLTTERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVITKPLKIEDKIN 194 Query: 316 LGPTTPLPDLVTI 278 L + +P V++ Sbjct: 195 LKESPSVPQEVSV 207
>RS3_HALMA (P20281) 30S ribosomal protein S3P (HmaS3) (HS1)| Length = 304 Score = 43.1 bits (100), Expect = 4e-04 Identities = 21/67 (31%), Positives = 36/67 (53%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GK+ R++ KF GY+ +G+P E +D+ V +++ G +G++VKI + Sbjct: 134 GKVTGARSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRVKI---------IP 184 Query: 310 PTTPLPD 290 P LPD Sbjct: 185 PNAELPD 191
>RS3_AERPE (Q9YF78) 30S ribosomal protein S3P| Length = 246 Score = 42.7 bits (99), Expect = 5e-04 Identities = 22/55 (40%), Positives = 33/55 (60%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDP 326 GKL ++RA+ KFK G + SG V+E +D A + L +GV+G+ V I+ P Sbjct: 136 GKLTSERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKGVIGVDVIIVKPGKP 190
>RS3_NATPD (Q3IMY2) 30S ribosomal protein S3P| Length = 305 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GK+ R++ KF GY+ +G+P +D+ V +++ G +G++VKI + Sbjct: 134 GKVTGARSRVEKFNRGYIKHNGEPAESIVDSGVGTAVMKLGTIGVQVKI---------IP 184 Query: 310 PTTPLPDLVTIHPPKE-EDELRPP 242 P LPD ++ E ED + P Sbjct: 185 PEAELPDDFEVYEDIEVEDFVEEP 208
>RS3_SULTO (Q975I7) 30S ribosomal protein S3P| Length = 225 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 10/67 (14%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKV----------KIM 341 GKL ++RAK K K+G + SG +++ +D AV +L+ GV G+++ KI Sbjct: 135 GKLTSERAKYEKLKEGVVYKSGAFLDKIVDRAVAIAMLKPGVYGVEILITKPMKSVDKIE 194 Query: 340 LDWDPKG 320 L PKG Sbjct: 195 LREQPKG 201
>RS3_PICTO (Q6L1C1) 30S ribosomal protein S3P| Length = 217 Score = 41.2 bits (95), Expect = 0.002 Identities = 24/80 (30%), Positives = 39/80 (48%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GK+ +RA++ KF G + SG+P ++ L+ G++G+ V+I L Sbjct: 133 GKISGERARAQKFMFGKIKYSGEPARSGVEYGFSEAKLKTGIIGVSVRI---------LK 183 Query: 310 PTTPLPDLVTIHPPKEEDEL 251 LPD + I P K E E+ Sbjct: 184 SNYRLPDDIEIKPVKIEKEV 203
>RS3_HALSA (P15009) 30S ribosomal protein S3P (HS4) (HHAS3)| Length = 302 Score = 39.7 bits (91), Expect = 0.004 Identities = 22/80 (27%), Positives = 37/80 (46%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GK+ R + KF GY+ +G+P E +D +++ G +G+ VKI + Sbjct: 134 GKVTGNRGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGVNVKI---------IP 184 Query: 310 PTTPLPDLVTIHPPKEEDEL 251 P LPD I + ++L Sbjct: 185 PNAELPDDFEIQEDADIEDL 204
>RS3_ARCFU (O28360) 30S ribosomal protein S3P| Length = 229 Score = 36.6 bits (83), Expect = 0.038 Identities = 20/67 (29%), Positives = 33/67 (49%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GKL ++RA++ KF G ++ +G P + + + GVLG+ V+I + Sbjct: 133 GKLVSERARTEKFVAGTIVHTGDPAESMVQKGFDIAIKKLGVLGVSVRI---------IP 183 Query: 310 PTTPLPD 290 P LPD Sbjct: 184 PDVTLPD 190
>RS3_THEAC (Q9HIR5) 30S ribosomal protein S3P| Length = 225 Score = 36.2 bits (82), Expect = 0.049 Identities = 23/71 (32%), Positives = 36/71 (50%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GK+ +RA+ KF G + SG+P ++ + L+ G+LG+ VKI L Sbjct: 133 GKISGERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTVKI---------LN 183 Query: 310 PTTPLPDLVTI 278 P LPD+ +I Sbjct: 184 PEYKLPDVFSI 194
>RS3_THEVO (Q97BX1) 30S ribosomal protein S3P| Length = 225 Score = 35.8 bits (81), Expect = 0.064 Identities = 23/71 (32%), Positives = 36/71 (50%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLG 311 GK+ +RA+ KF G + SG+P ++ + L+ G+LG+ VKI L Sbjct: 133 GKISGERARYQKFIYGNVKYSGEPGSKGMLVGFSTAKLKVGILGVTVKI---------LN 183 Query: 310 PTTPLPDLVTI 278 P LPD+ +I Sbjct: 184 PEYKLPDVFSI 194
>RS3_PYRAE (Q8ZWI0) 30S ribosomal protein S3P| Length = 218 Score = 35.8 bits (81), Expect = 0.064 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = -2 Query: 490 GKLRAQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKI 344 GKL +RA+ K G + G + AV HVLL+ G+ GI+V+I Sbjct: 144 GKLSTERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRI 192
>IL2RB_PANTR (Q38J84) Interleukin-2 receptor beta chain precursor (IL-2| receptor) (P70-75) (High affinity IL-2 receptor beta subunit) (CD122 antigen) Length = 551 Score = 33.5 bits (75), Expect = 0.32 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Frame = -2 Query: 358 IKVKIMLDWDPKGKLGPTTP-LPDLVTIHPPKE 263 ++ ++ DWDP+ LGP TP +PDLV PP E Sbjct: 459 LQERVPRDWDPQ-PLGPPTPGVPDLVDFQPPPE 490
>IL2RB_HUMAN (P14784) Interleukin-2 receptor beta chain precursor (IL-2| receptor) (P70-75) (p75) (High affinity IL-2 receptor beta subunit) (CD122 antigen) Length = 551 Score = 33.5 bits (75), Expect = 0.32 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%) Frame = -2 Query: 358 IKVKIMLDWDPKGKLGPTTP-LPDLVTIHPPKE 263 ++ ++ DWDP+ LGP TP +PDLV PP E Sbjct: 459 LQERVPRDWDPQ-PLGPPTPGVPDLVDFQPPPE 490
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 29.6 bits (65), Expect = 4.6 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 328 PKGKLGPTTPLPDLVTIHPPKEEDELRPPAL 236 P ++ +PLP + + PP EE L PPAL Sbjct: 646 PPPEVSRLSPLPVVSRLSPPPEESPLSPPAL 676
>IL2RB_MACFA (Q38J85) Interleukin-2 receptor beta chain precursor (IL-2| receptor) (P70-75) (High affinity IL-2 receptor beta subunit) (CD122 antigen) Length = 551 Score = 29.6 bits (65), Expect = 4.6 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = -2 Query: 358 IKVKIMLDWDPKGKLGPTTP-LPDLVTIHPPKE 263 ++ ++ DWDP+ LGP TP +PDLV P E Sbjct: 459 LQERVPRDWDPQP-LGPPTPGVPDLVDFQPRPE 490
>CBID_CHRVO (Q7NXR0) Putative cobalt-precorrin-6A synthase [deacetylating] (EC| 2.1.1.-) Length = 377 Score = 29.6 bits (65), Expect = 4.6 Identities = 23/56 (41%), Positives = 27/56 (48%) Frame = +2 Query: 212 TTGSLDLNQSRGAQLVLLLRGVDGDEVRQGGGRAKFALGVPVKHNLHLDTKNALSE 379 TTGS + A L+LLL GVD DEV F L VPV+ LD +E Sbjct: 23 TTGSCATAAVKAA-LMLLLDGVDADEVFISLPDPDFYLAVPVESVAWLDENTVRAE 77
>RT03_ORYSA (P46773) Mitochondrial ribosomal protein S3| Length = 538 Score = 29.3 bits (64), Expect = 6.0 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -2 Query: 415 NEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGK 317 N+ ID A+ V R G+ G+KV+I + KG+ Sbjct: 498 NQKIDYALAEVSTRNGISGVKVRISYSQNKKGR 530
>TBX6_MOUSE (P70327) T-box transcription factor TBX6 (T-box protein 6)| Length = 540 Score = 28.9 bits (63), Expect = 7.8 Identities = 13/22 (59%), Positives = 14/22 (63%) Frame = -2 Query: 337 DWDPKGKLGPTTPLPDLVTIHP 272 DW+P GK P LPD V IHP Sbjct: 157 DWEPSGKAEPR--LPDRVYIHP 176 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,190,570 Number of Sequences: 219361 Number of extensions: 1261489 Number of successful extensions: 3490 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 3389 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3486 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3478785780 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
