ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart25d11 |
|---|---|
| Clone Library Name | barley_pub |
>RL18_CICAR (O65729) 60S ribosomal protein L18 (Fragment)| Length = 183 Score = 46.6 bits (109), Expect = 3e-05 Identities = 21/23 (91%), Positives = 22/23 (95%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFKV 368 YVRSKGRKFEKARGRR SRGF+V Sbjct: 161 YVRSKGRKFEKARGRRKSRGFRV 183
>RL18_ARATH (P42791) 60S ribosomal protein L18| Length = 187 Score = 45.4 bits (106), Expect = 6e-05 Identities = 20/23 (86%), Positives = 22/23 (95%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFKV 368 YVR+KGRKFEKARG+R SRGFKV Sbjct: 165 YVRAKGRKFEKARGKRKSRGFKV 187
>RL18_RAT (P12001) 60S ribosomal protein L18| Length = 187 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/22 (86%), Positives = 21/22 (95%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFK 371 YVRSKGRKFE+ARGRR SRG+K Sbjct: 165 YVRSKGRKFERARGRRASRGYK 186
>RL18_MOUSE (P35980) 60S ribosomal protein L18| Length = 187 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/22 (86%), Positives = 21/22 (95%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFK 371 YVRSKGRKFE+ARGRR SRG+K Sbjct: 165 YVRSKGRKFERARGRRASRGYK 186
>RL18_HUMAN (Q07020) 60S ribosomal protein L18| Length = 187 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/22 (86%), Positives = 21/22 (95%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFK 371 YVRSKGRKFE+ARGRR SRG+K Sbjct: 165 YVRSKGRKFERARGRRASRGYK 186
>RL18_ICTPU (Q90YV0) 60S ribosomal protein L18| Length = 187 Score = 42.7 bits (99), Expect = 4e-04 Identities = 18/22 (81%), Positives = 21/22 (95%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFK 371 Y+RSKGRKFE+ARGRR SRG+K Sbjct: 165 YIRSKGRKFERARGRRASRGYK 186
>RL18B_SCHPO (Q8TFH1) 60S ribosomal protein L18-B| Length = 187 Score = 42.7 bits (99), Expect = 4e-04 Identities = 19/23 (82%), Positives = 21/23 (91%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFKV 368 YVRS+GRKFE+ARGRR SR FKV Sbjct: 165 YVRSEGRKFERARGRRKSRAFKV 187
>RL18A_SCHPO (Q10192) 60S ribosomal protein L18-A| Length = 187 Score = 42.7 bits (99), Expect = 4e-04 Identities = 19/23 (82%), Positives = 21/23 (91%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFKV 368 YVRS+GRKFE+ARGRR SR FKV Sbjct: 165 YVRSEGRKFERARGRRKSRAFKV 187
>RL18B_XENLA (P02412) 60S ribosomal protein L18-B (L14B)| Length = 187 Score = 40.4 bits (93), Expect = 0.002 Identities = 18/22 (81%), Positives = 20/22 (90%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFK 371 YV SKGRKFE+ARGRR SRG+K Sbjct: 165 YVLSKGRKFERARGRRASRGYK 186
>RL18A_XENLA (P09897) 60S ribosomal protein L18-A (L14A)| Length = 187 Score = 40.4 bits (93), Expect = 0.002 Identities = 18/22 (81%), Positives = 20/22 (90%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFK 371 YV SKGRKFE+ARGRR SRG+K Sbjct: 165 YVLSKGRKFERARGRRASRGYK 186
>RL18_ORENI (P69091) 60S ribosomal protein L18| Length = 187 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/22 (81%), Positives = 20/22 (90%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFK 371 YVRSKGRKFE+ARGRR S G+K Sbjct: 165 YVRSKGRKFERARGRRASCGYK 186
>RL18_OREMO (P69090) 60S ribosomal protein L18| Length = 187 Score = 40.0 bits (92), Expect = 0.002 Identities = 18/22 (81%), Positives = 20/22 (90%) Frame = -1 Query: 436 YVRSKGRKFEKARGRRNSRGFK 371 YVRSKGRKFE+ARGRR S G+K Sbjct: 165 YVRSKGRKFERARGRRASCGYK 186
>RL18_YEAST (P07279) 60S ribosomal protein L18 (RP28)| Length = 186 Score = 37.4 bits (85), Expect = 0.016 Identities = 16/22 (72%), Positives = 19/22 (86%) Frame = -1 Query: 433 VRSKGRKFEKARGRRNSRGFKV 368 + S GRKFE+ARGRR S+GFKV Sbjct: 165 ILSTGRKFERARGRRRSKGFKV 186
>CCBS_OENBE (Q04648) Probable cytochrome c biosynthesis protein| Length = 577 Score = 33.9 bits (76), Expect = 0.18 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -2 Query: 237 FWKILMAVNCFYFVSLKTMFCCTLSLRILCWQCLLLNVFSLRDG 106 F ++A C + V L + CTL + I+ + C +L FS+R G Sbjct: 458 FMPWVLATACIHSVILPLLHSCTLLINIVTFLCCVLGTFSIRSG 501
>RS12_CHLTR (P66370) 30S ribosomal protein S12| Length = 123 Score = 31.6 bits (70), Expect = 0.87 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H I V K+LP +YH GA+DCAA+ + Sbjct: 68 GGEGHNLQEHSIVLVQGGRVKDLPGVRYHIVRGALDCAAVKNR 110
>RS12_CHLTA (Q3KLR1) 30S ribosomal protein S12| Length = 123 Score = 31.6 bits (70), Expect = 0.87 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H I V K+LP +YH GA+DCAA+ + Sbjct: 68 GGEGHNLQEHSIVLVQGGRVKDLPGVRYHIVRGALDCAAVKNR 110
>RS12_CHLMU (P66371) 30S ribosomal protein S12| Length = 123 Score = 31.6 bits (70), Expect = 0.87 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H I V K+LP +YH GA+DCAA+ + Sbjct: 68 GGEGHNLQEHSIVLVQGGRVKDLPGVRYHIVRGALDCAAVKNR 110
>RS12_CHLCV (Q824G2) 30S ribosomal protein S12| Length = 123 Score = 31.6 bits (70), Expect = 0.87 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H I V K+LP +YH GA+DCAA+ + Sbjct: 68 GGEGHNLQEHSIVLVQGGRVKDLPGVRYHIVRGALDCAAVKNR 110
>RS12_CHLAB (Q5L6S7) 30S ribosomal protein S12| Length = 123 Score = 31.6 bits (70), Expect = 0.87 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H I V K+LP +YH GA+DCAA+ + Sbjct: 68 GGEGHNLQEHSIVLVQGGRVKDLPGVRYHIVRGALDCAAVKNR 110
>G6PI_ACIAD (Q59088) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 557 Score = 31.2 bits (69), Expect = 1.1 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 13/80 (16%) Frame = +1 Query: 139 TLPAENSKRQGATKHGLQAHKIKTVDSHKNLPKYHSNTGAIDCAALSTK----------- 285 T+ E K A HG+ H +T + H+N+P G + L+ K Sbjct: 290 TIGVEGFKAFLAGAHGIDEH-FRTTEFHQNIPVLMGLMGIWNTNYLNLKTHAVLPYDGRL 348 Query: 286 -YFTNYCQLLK-QNNSRSTQ 339 YFT+Y Q L+ ++N +STQ Sbjct: 349 KYFTSYLQQLEMESNGKSTQ 368
>RS12_PARUW (Q6MER6) 30S ribosomal protein S12| Length = 126 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H I V K+LP +YH GA+DCAA+ + Sbjct: 68 GGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGALDCAAVKDR 110
>RS12_VIBVY (Q7MH40) 30S ribosomal protein S12| Length = 124 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA ++ + Sbjct: 68 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVNNR 110
>RS12_VIBVU (Q8DCR0) 30S ribosomal protein S12| Length = 124 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA ++ + Sbjct: 68 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVNNR 110
>RS12_SHEON (P59166) 30S ribosomal protein S12| Length = 124 Score = 30.0 bits (66), Expect = 2.5 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA ++++ Sbjct: 68 GGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCAGVTSR 110
>TMM47_BRARE (Q6PFT6) Transmembrane protein 47 (Transmembrane 4 superfamily| member 10) Length = 181 Score = 30.0 bits (66), Expect = 2.5 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = -2 Query: 339 LRGAAVVLFEQLTVISKVLSTESSTIYRPSVRMIFWKILMAVNCFYFVSLKTMFCCTLSL 160 L GA ++L L + V YRP M+F +++ C +K F T+SL Sbjct: 86 LGGAFLILLSFLVALVSVCIRSRRRFYRPVAIMLFAAVVLQACCLVLYPIK--FIETISL 143 Query: 159 RI 154 RI Sbjct: 144 RI 145
>RS12_VIBPA (Q87L43) 30S ribosomal protein S12| Length = 124 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA ++ + Sbjct: 68 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVNDR 110
>RS12_VIBF1 (Q5E8C1) 30S ribosomal protein S12| Length = 124 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA ++ + Sbjct: 68 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVNDR 110
>RS12_VIBCH (Q9KUZ9) 30S ribosomal protein S12| Length = 124 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA ++ + Sbjct: 68 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVNDR 110
>RS12_PSYAR (Q4FQG3) 30S ribosomal protein S12| Length = 124 Score = 29.6 bits (65), Expect = 3.3 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = +1 Query: 151 ENSKRQGATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 E S G H LQ H + + K+LP +YH+ GA+DCA + + Sbjct: 62 EVSSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVKDR 110
>RS12_ACTPL (O31194) 30S ribosomal protein S12 (Fragment)| Length = 82 Score = 29.6 bits (65), Expect = 3.3 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA++ + Sbjct: 38 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCASVKDR 80
>RS12_CHLPN (Q9Z800) 30S ribosomal protein S12| Length = 123 Score = 29.6 bits (65), Expect = 3.3 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H I + K+LP +YH G +DCAA+ + Sbjct: 68 GGEGHNLQEHSIVLIQGGRVKDLPGVRYHIVRGTLDCAAVKNR 110
>RS12_PHOPR (Q6LVC3) 30S ribosomal protein S12| Length = 124 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 4/41 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALS 279 G H LQ H + + K+LP +YH+ GA+DCA ++ Sbjct: 68 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVN 108
>RS12_MANSM (Q65W91) 30S ribosomal protein S12| Length = 124 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA + + Sbjct: 68 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVKDR 110
>RS12_HAEI8 (Q4QMT8) 30S ribosomal protein S12| Length = 124 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA + + Sbjct: 68 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVKDR 110
>RS12_HAEDU (Q9Z6D2) 30S ribosomal protein S12| Length = 124 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA + + Sbjct: 68 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVKDR 110
>RS12_COLP3 (Q47UW1) 30S ribosomal protein S12| Length = 124 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DC+ +S + Sbjct: 68 GGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVSDR 110
>RS12_PASMU (Q9CL86) 30S ribosomal protein S12| Length = 123 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA + + Sbjct: 67 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVKDR 109
>RS12_PASHA (P63195) 30S ribosomal protein S12| Length = 123 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA + + Sbjct: 67 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVKDR 109
>RS12_HAEPR (Q5F1R7) 30S ribosomal protein S12| Length = 123 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA + + Sbjct: 67 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVKDR 109
>RS12_HAEIN (P63196) 30S ribosomal protein S12 (Streptomycin resistance| protein) Length = 123 Score = 29.3 bits (64), Expect = 4.3 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP +YH+ GA+DCA + + Sbjct: 67 GGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCAGVKDR 109
>RS12_PSEHT (Q3ILP7) 30S ribosomal protein S12| Length = 124 Score = 28.9 bits (63), Expect = 5.7 Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + + K+LP ++H+ GA+DCA +S + Sbjct: 68 GGEGHNLQEHSVILIRGGRVKDLPGVRFHTVRGALDCAGVSDR 110
>RS12_IDILO (Q5QWB6) 30S ribosomal protein S12| Length = 124 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 4/49 (8%) Frame = +1 Query: 151 ENSKRQGATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 E S G H LQ H + + K+LP +YH+ GA+DC+ ++ + Sbjct: 62 EVSSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGALDCSGVNDR 110
>RS12_CARHZ (Q3A9R0) 30S ribosomal protein S12| Length = 126 Score = 28.9 bits (63), Expect = 5.7 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Frame = +1 Query: 169 GATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 G H LQ H + V K+LP +YH GA+DCA + + Sbjct: 68 GGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGALDCAGVQNR 110
>PPQ1_YEAST (P32945) Serine/threonine-protein phosphatase PPQ (EC 3.1.3.16)| Length = 549 Score = 28.9 bits (63), Expect = 5.7 Identities = 23/79 (29%), Positives = 33/79 (41%) Frame = +1 Query: 184 GLQAHKIKTVDSHKNLPKYHSNTGAIDCAALSTKYFTNYCQLLKQNNSRSTQTATNQKGQ 363 G AHK K +NL + + ALS+ +L+ + ST TAT Sbjct: 88 GENAHKQKIYTKDENLKSLYLDIDVSVAKALSSS--ATAPKLINTARTSSTTTATTSNNI 145 Query: 364 LKP*SHGCSSYHEPSQTSY 420 L S+ S+Y PS S+ Sbjct: 146 LTSPSYRESNYSSPSSYSF 164
>RS12_ACIAD (Q6FDS8) 30S ribosomal protein S12| Length = 124 Score = 28.5 bits (62), Expect = 7.4 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = +1 Query: 151 ENSKRQGATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 E S G H LQ H + + K+LP +YH+ G++DCA + + Sbjct: 62 EVSSYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHTVRGSLDCAGVKDR 110
>CYB_PERTA (Q94T21) Cytochrome b| Length = 380 Score = 28.1 bits (61), Expect = 9.7 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Frame = -2 Query: 333 GAAVVLFEQLTVISKV----LSTESSTIYRPSVRMIFWKILMAV 214 G + L + +++ V S + ST +RP +++FW ++ AV Sbjct: 289 GGVLALLSSILILTAVPALHASKQRSTTFRPITQLLFWTLVAAV 332
>PYR1_SQUAC (Q91437) CAD protein [Includes: Glutamine-dependent| carbamoyl-phosphate synthase (EC 6.3.5.5); Aspartate carbamoyltransferase (EC 2.1.3.2); Dihydroorotase (EC 3.5.2.3)] Length = 2242 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -2 Query: 423 RVGSLRRLVVGGTAVASRFKLPFLVSRC 340 R S RRL G AV +RF LP + RC Sbjct: 1849 RTASPRRLASSGPAVDARFHLPPRIHRC 1876
>RS12_PHOLL (Q7N9B4) 30S ribosomal protein S12| Length = 124 Score = 28.1 bits (61), Expect = 9.7 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = +1 Query: 151 ENSKRQGATKHGLQAHKIKTVDSH--KNLP--KYHSNTGAIDCAALSTK 285 E S G H LQ H + + K+LP +YH+ GA+DC+ + + Sbjct: 62 EVSSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGALDCSGVKDR 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,743,926 Number of Sequences: 219361 Number of extensions: 982393 Number of successful extensions: 2576 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 2517 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2575 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
