Clone Name | rbart25d11 |
---|---|
Clone Library Name | barley_pub |
>gb|AY846824.1| Triticum aestivum ribosomal protein L18 mRNA, complete cds Length = 793 Score = 418 bits (211), Expect = e-114 Identities = 254/267 (95%), Gaps = 1/267 (0%) Strand = Plus / Minus Query: 171 tgcaacaaaacatggtcttcaag-ctcacaaaataaaaacagttgacagccataagaatc 229 |||||| |||||||||||||||| |||||||||| ||||||||||||||| ||||||||| Sbjct: 785 tgcaacgaaacatggtcttcaagnctcacaaaatcaaaacagttgacagcaataagaatc 726 Query: 230 ttccaaaatatcattcgaacactggggcgatagattgtgctgctctcagtactaagtact 289 || ||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||| Sbjct: 725 ttgcaaaatatcattcgaacactggggcgatagattttgctactctcagtacaaagtact 666 Query: 290 ttactaattactgtcaattgctcaaacagaacaacagccgctccacgcaaacagcgacta 349 |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 665 ttactaattactatcaattgctcaaacagaacaacagccgctccacacaaacagcgacta 606 Query: 350 accagaaagggcaacttaaaccttgaagccacggctgttcctcctaccacgagccttctc 409 || ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 605 acaagaaagggcgacttaaaccttgaagccacggctgttcctcctaccacgaaccttctc 546 Query: 410 aaacttcctacccttggagcgcacata 436 ||||||||||||||||||||||||||| Sbjct: 545 aaacttcctacccttggagcgcacata 519
>gb|BT017364.1| Zea mays clone EL01N0324F01.c mRNA sequence Length = 772 Score = 113 bits (57), Expect = 5e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 364 cttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccct 423 ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 608 cttaaaccttgaacccacggctgttcctcctgccacgagccttctcgaacttccttccct 549 Query: 424 tggagcgcacata 436 ||||||||||||| Sbjct: 548 tggagcgcacata 536
>gb|AY104839.1| Zea mays PCO137857 mRNA sequence Length = 1127 Score = 113 bits (57), Expect = 5e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 364 cttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccct 423 ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||| |||| Sbjct: 833 cttaaaccttgaacccacggctgttcctcctgccacgagccttctcgaacttccttccct 774 Query: 424 tggagcgcacata 436 ||||||||||||| Sbjct: 773 tggagcgcacata 761
>gb|DQ363992.1| Saccharum hybrid cultivar putative 60S ribosomal protein L18 mRNA, partial cds Length = 527 Score = 111 bits (56), Expect = 2e-21 Identities = 68/72 (94%) Strand = Plus / Minus Query: 365 ttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccctt 424 |||||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||| Sbjct: 318 ttaaaccttgaatccacggctgttcctcctgccacgagccttctcgaacttccttccctt 259 Query: 425 ggagcgcacata 436 |||||||||||| Sbjct: 258 ggagcgcacata 247 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Minus Query: 290 ttactaattactgtcaattgctcaaacagaac 321 ||||||||||||||| |||| ||||||||||| Sbjct: 395 ttactaattactgtcgattgatcaaacagaac 364
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 363 acttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccc 422 ||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||| Sbjct: 49878 acttagaccttgaatccacggctgttcctcctgccacgggccttctcgaacttccttccc 49819 Query: 423 ttggagcgcacata 436 |||||||||||||| Sbjct: 49818 ttggagcgcacata 49805 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 291 tactaattactgtcaattgctcaaacagaac 321 |||||||||||||| |||||||||||||||| Sbjct: 49950 tactaattactgtcgattgctcaaacagaac 49920
>dbj|AK061929.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-C09, full insert sequence Length = 839 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 363 acttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccc 422 ||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||| Sbjct: 632 acttagaccttgaatccacggctgttcctcctgccacgggccttctcgaacttccttccc 573 Query: 423 ttggagcgcacata 436 |||||||||||||| Sbjct: 572 ttggagcgcacata 559 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 291 tactaattactgtcaattgctcaaacagaac 321 |||||||||||||| |||||||||||||||| Sbjct: 704 tactaattactgtcgattgctcaaacagaac 674
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 363 acttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccc 422 ||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||| Sbjct: 3172161 acttagaccttgaatccacggctgttcctcctgccacgggccttctcgaacttccttccc 3172102 Query: 423 ttggagcgcacata 436 |||||||||||||| Sbjct: 3172101 ttggagcgcacata 3172088 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 291 tactaattactgtcaattgctcaaacagaac 321 |||||||||||||| |||||||||||||||| Sbjct: 3172233 tactaattactgtcgattgctcaaacagaac 3172203
>dbj|AK120877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027I12, full insert sequence Length = 997 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 363 acttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccc 422 ||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||| Sbjct: 633 acttagaccttgaatccacggctgttcctcctgccacgggccttctcgaacttccttccc 574 Query: 423 ttggagcgcacata 436 |||||||||||||| Sbjct: 573 ttggagcgcacata 560 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 291 tactaattactgtcaattgctcaaacagaac 321 |||||||||||||| |||||||||||||||| Sbjct: 705 tactaattactgtcgattgctcaaacagaac 675
>dbj|AK102810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108L02, full insert sequence Length = 824 Score = 99.6 bits (50), Expect = 7e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 363 acttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccc 422 ||||| |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||| Sbjct: 633 acttagaccttgaatccacggctgttcctcctgccacgggccttctcgaacttccttccc 574 Query: 423 ttggagcgcacata 436 |||||||||||||| Sbjct: 573 ttggagcgcacata 560 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 291 tactaattactgtcaattgctcaaacagaac 321 |||||||||||||| |||||||||||||||| Sbjct: 705 tactaattactgtcgattgctcaaacagaac 675
>ref|NM_185271.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 567 Score = 95.6 bits (48), Expect = 1e-16 Identities = 63/68 (92%) Strand = Plus / Minus Query: 369 accttgaagccacggctgttcctcctaccacgagccttctcaaacttcctacccttggag 428 |||||||| ||||||||||||||||| ||||| |||||||| |||||||| ||||||||| Sbjct: 563 accttgaatccacggctgttcctcctgccacgggccttctcgaacttccttcccttggag 504 Query: 429 cgcacata 436 |||||||| Sbjct: 503 cgcacata 496
>gb|BT019314.1| Zea mays clone Contig987.F mRNA sequence Length = 786 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 363 acttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccc 422 ||||| ||||||||||| | |||||||||||| || | ||||||||||||||||||||| Sbjct: 184 acttagaccttgaagcccctgctgttcctccttcctctcgccttctcaaacttcctaccc 243 Query: 423 ttggagcgcacata 436 || ||||| ||||| Sbjct: 244 ttcgagcgaacata 257
>gb|AY106208.1| Zea mays PCO085865 mRNA sequence Length = 1008 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 363 acttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccc 422 ||||| ||||||||||| | |||||||||||| || | ||||||||||||||||||||| Sbjct: 614 acttagaccttgaagcccctgctgttcctccttcctctcgccttctcaaacttcctaccc 555 Query: 423 ttggagcgcacata 436 || ||||| ||||| Sbjct: 554 ttcgagcgaacata 541
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 362 aacttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctacc 421 |||||| ||||||||||| |||||||||||| || | ||||||||||||||||| || Sbjct: 12690607 aacttagaccttgaagcctttgctgttcctccttcctctcgccttctcaaacttccttcc 12690666 Query: 422 cttggagcgcac 433 ||| |||||||| Sbjct: 12690667 ctttgagcgcac 12690678
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 362 aacttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctacc 421 |||||| ||||||||||| |||||||||||| || | ||||||||||||||||| || Sbjct: 12687370 aacttagaccttgaagcctttgctgttcctccttcctctcgccttctcaaacttccttcc 12687429 Query: 422 cttggagcgcac 433 ||| |||||||| Sbjct: 12687430 ctttgagcgcac 12687441
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 362 aacttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctacc 421 |||||| ||||||||||| |||||||||||| || | ||||||||||||||||| || Sbjct: 45060 aacttagaccttgaagcctttgctgttcctccttcctctcgccttctcaaacttccttcc 45119 Query: 422 cttggagcgcac 433 ||| |||||||| Sbjct: 45120 ctttgagcgcac 45131
>dbj|AK121580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037B18, full insert sequence Length = 769 Score = 63.9 bits (32), Expect = 4e-07 Identities = 62/72 (86%) Strand = Plus / Minus Query: 362 aacttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctacc 421 |||||| ||||||||||| |||||||||||| || | ||||||||||||||||| || Sbjct: 610 aacttagaccttgaagcctttgctgttcctccttcctctcgccttctcaaacttccttcc 551 Query: 422 cttggagcgcac 433 ||| |||||||| Sbjct: 550 ctttgagcgcac 539
>emb|AJ563457.1|CGI563457 Crassostrea gigas partial mRNA for ribosomal protein L18 (rpl18 gene) Length = 573 Score = 54.0 bits (27), Expect = 4e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 403 ccttctcaaacttcctacccttggagcgcac 433 |||||||||||||||| |||||||||||||| Sbjct: 535 ccttctcaaacttccttcccttggagcgcac 505
>emb|CR734840.2|CNS0GTS7 Tetraodon nigroviridis full-length cDNA Length = 523 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 441 accacgggccctctcaaacttcctgcccttggagcggacata 400
>emb|CR734324.2|CNS0GTDV Tetraodon nigroviridis full-length cDNA Length = 614 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 533 accacgggccctctcaaacttcctgcccttggagcggacata 492
>emb|CR712214.2|CNS0GCHU Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR727240.2|CNS0GO32 Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR722346.2|CNS0GKB4 Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR722203.2|CNS0GK75 Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR720412.2|CNS0GITE Tetraodon nigroviridis full-length cDNA Length = 604 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 522 accacgggccctctcaaacttcctgcccttggagcggacata 481
>emb|CR718786.2|CNS0GHK8 Tetraodon nigroviridis full-length cDNA Length = 654 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR718640.2|CNS0GHG6 Tetraodon nigroviridis full-length cDNA Length = 646 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 564 accacgggccctctcaaacttcctgcccttggagcggacata 523
>emb|CR718477.2|CNS0GHBN Tetraodon nigroviridis full-length cDNA Length = 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 557 accacgggccctctcaaacttcctgcccttggagcggacata 516
>emb|CR718216.2|CNS0GH4E Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR716822.2|CNS0GG1R Tetraodon nigroviridis full-length cDNA Length = 638 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 556 accacgggccctctcaaacttcctgcccttggagcggacata 515
>emb|CR716557.2|CNS0GFUE Tetraodon nigroviridis full-length cDNA Length = 646 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 564 accacgggccctctcaaacttcctgcccttggagcggacata 523
>emb|CR716126.2|CNS0GFII Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR715708.2|CNS0GF6W Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR713867.2|CNS0GDRR Tetraodon nigroviridis full-length cDNA Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 535 accacgggccctctcaaacttcctgcccttggagcggacata 494
>emb|CR713475.2|CNS0GDGV Tetraodon nigroviridis full-length cDNA Length = 638 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 556 accacgggccctctcaaacttcctgcccttggagcggacata 515
>emb|CR713262.2|CNS0GDAY Tetraodon nigroviridis full-length cDNA Length = 649 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 567 accacgggccctctcaaacttcctgcccttggagcggacata 526
>emb|CR710888.2|CNS0GBH0 Tetraodon nigroviridis full-length cDNA Length = 638 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 556 accacgggccctctcaaacttcctgcccttggagcggacata 515
>emb|CR710189.2|CNS0GAXL Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR710045.2|CNS0GATL Tetraodon nigroviridis full-length cDNA Length = 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 557 accacgggccctctcaaacttcctgcccttggagcggacata 516
>emb|CR709916.2|CNS0GAQ0 Tetraodon nigroviridis full-length cDNA Length = 649 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 567 accacgggccctctcaaacttcctgcccttggagcggacata 526
>emb|CR707932.2|CNS0G96W Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR707928.2|CNS0G96S Tetraodon nigroviridis full-length cDNA Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 535 accacgggccctctcaaacttcctgcccttggagcggacata 494
>emb|CR707373.2|CNS0G8RD Tetraodon nigroviridis full-length cDNA Length = 616 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 534 accacgggccctctcaaacttcctgcccttggagcggacata 493
>emb|CR707090.2|CNS0G8JI Tetraodon nigroviridis full-length cDNA Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 535 accacgggccctctcaaacttcctgcccttggagcggacata 494
>emb|CR706834.2|CNS0G8CE Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR706311.2|CNS0G7XV Tetraodon nigroviridis full-length cDNA Length = 649 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 567 accacgggccctctcaaacttcctgcccttggagcggacata 526
>emb|CR705355.2|CNS0G77B Tetraodon nigroviridis full-length cDNA Length = 644 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 562 accacgggccctctcaaacttcctgcccttggagcggacata 521
>emb|CR705285.2|CNS0G75D Tetraodon nigroviridis full-length cDNA Length = 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 557 accacgggccctctcaaacttcctgcccttggagcggacata 516
>emb|CR705192.2|CNS0G72S Tetraodon nigroviridis full-length cDNA Length = 642 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 560 accacgggccctctcaaacttcctgcccttggagcggacata 519
>emb|CR704690.2|CNS0G6OU Tetraodon nigroviridis full-length cDNA Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 535 accacgggccctctcaaacttcctgcccttggagcggacata 494
>emb|CR704641.2|CNS0G6NH Tetraodon nigroviridis full-length cDNA Length = 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 557 accacgggccctctcaaacttcctgcccttggagcggacata 516
>emb|CR701253.2|CNS0G41D Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR700146.2|CNS0G36M Tetraodon nigroviridis full-length cDNA Length = 645 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 563 accacgggccctctcaaacttcctgcccttggagcggacata 522
>emb|CR696223.2|CNS0G05N Tetraodon nigroviridis full-length cDNA Length = 644 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 562 accacgggccctctcaaacttcctgcccttggagcggacata 521
>emb|CR695482.2|CNS0FZL2 Tetraodon nigroviridis full-length cDNA Length = 477 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 395 accacgggccctctcaaacttcctgcccttggagcggacata 354
>emb|CR694940.2|CNS0FZ60 Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR694036.2|CNS0FYGW Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR692628.2|CNS0FXDS Tetraodon nigroviridis full-length cDNA Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 535 accacgggccctctcaaacttcctgcccttggagcggacata 494
>emb|CR690516.2|CNS0FVR4 Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR688214.2|CNS0FTZ6 Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR687256.2|CNS0FT8K Tetraodon nigroviridis full-length cDNA Length = 642 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 560 accacgggccctctcaaacttcctgcccttggagcggacata 519
>emb|CR686542.2|CNS0FSOQ Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR679416.2|CNS0FN6S Tetraodon nigroviridis full-length cDNA Length = 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 557 accacgggccctctcaaacttcctgcccttggagcggacata 516
>emb|CR677668.2|CNS0FLUL Tetraodon nigroviridis full-length cDNA Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 535 accacgggccctctcaaacttcctgcccttggagcggacata 494
>emb|CR676604.2|CNS0FL14 Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR674481.2|CNS0FJEF Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR672842.2|CNS0FI4W Tetraodon nigroviridis full-length cDNA Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 535 accacgggccctctcaaacttcctgcccttggagcggacata 494
>emb|CR672907.2|CNS0FI6P Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>emb|CR668215.2|CNS0FEKD Tetraodon nigroviridis full-length cDNA Length = 617 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 535 accacgggccctctcaaacttcctgcccttggagcggacata 494
>emb|CR667583.2|CNS0FE2T Tetraodon nigroviridis full-length cDNA Length = 646 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 564 accacgggccctctcaaacttcctgcccttggagcggacata 523
>emb|CR666251.2|CNS0FD1T Tetraodon nigroviridis full-length cDNA Length = 659 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 577 accacgggccctctcaaacttcctgcccttggagcggacata 536
>emb|CR665491.2|CNS0FCGP Tetraodon nigroviridis full-length cDNA Length = 645 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 564 accacgggccctctcaaacttcctgcccttggagcggacata 523
>emb|CR663494.2|CNS0FAX8 Tetraodon nigroviridis full-length cDNA Length = 646 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 564 accacgggccctctcaaacttcctgcccttggagcggacata 523
>emb|CR662279.2|CNS0F9ZH Tetraodon nigroviridis full-length cDNA Length = 618 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 536 accacgggccctctcaaacttcctgcccttggagcggacata 495
>emb|CR661654.2|CNS0F9I4 Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR660863.2|CNS0F8W5 Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR660093.2|CNS0F8AR Tetraodon nigroviridis full-length cDNA Length = 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 557 accacgggccctctcaaacttcctgcccttggagcggacata 516
>emb|CR659514.2|CNS0F7UO Tetraodon nigroviridis full-length cDNA Length = 646 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 564 accacgggccctctcaaacttcctgcccttggagcggacata 523
>emb|CR650864.2|CNS0F16E Tetraodon nigroviridis full-length cDNA Length = 645 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 563 accacgggccctctcaaacttcctgcccttggagcggacata 522
>emb|CR650032.2|CNS0F0JA Tetraodon nigroviridis full-length cDNA Length = 646 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 564 accacgggccctctcaaacttcctgcccttggagcggacata 523
>emb|CR650013.2|CNS0F0IR Tetraodon nigroviridis full-length cDNA Length = 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 557 accacgggccctctcaaacttcctgcccttggagcggacata 516
>emb|CR647600.2|CNS0EYNQ Tetraodon nigroviridis full-length cDNA Length = 638 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 556 accacgggccctctcaaacttcctgcccttggagcggacata 515
>emb|CR646130.2|CNS0EXIW Tetraodon nigroviridis full-length cDNA Length = 639 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 557 accacgggccctctcaaacttcctgcccttggagcggacata 516
>emb|CR643404.2|CNS0EVF6 Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR642444.2|CNS0EUOI Tetraodon nigroviridis full-length cDNA Length = 645 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 563 accacgggccctctcaaacttcctgcccttggagcggacata 522
>emb|CR642257.2|CNS0EUJB Tetraodon nigroviridis full-length cDNA Length = 645 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 563 accacgggccctctcaaacttcctgcccttggagcggacata 522
>emb|CR640900.2|CNS0ETHM Tetraodon nigroviridis full-length cDNA Length = 640 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 558 accacgggccctctcaaacttcctgcccttggagcggacata 517
>emb|CR635790.2|CNS0EPJO Tetraodon nigroviridis full-length cDNA Length = 641 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||||||||||| ||||| Sbjct: 559 accacgggccctctcaaacttcctgcccttggagcggacata 518
>ref|XM_479492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 850 Score = 48.1 bits (24), Expect = 0.024 Identities = 63/76 (82%) Strand = Plus / Minus Query: 361 caacttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctac 420 ||||||| ||||||||||| ||||||||| || || | ||||||||||| ||||| | Sbjct: 623 caacttataccttgaagcccttgctgttccttcttcctcttgccttctcaaatttccttc 564 Query: 421 ccttggagcgcacata 436 |||| ||||| ||||| Sbjct: 563 cctttgagcgaacata 548
>gb|AY190744.1| Pagrus major ribosomal protein L18 mRNA, partial cds Length = 674 Score = 48.1 bits (24), Expect = 0.024 Identities = 33/36 (91%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcg 430 |||||||||| |||| |||||||| ||||||||||| Sbjct: 538 accacgagccctctcgaacttcctgcccttggagcg 503
>emb|CR722630.2|CNS0GKJ0 Tetraodon nigroviridis full-length cDNA Length = 622 Score = 48.1 bits (24), Expect = 0.024 Identities = 27/28 (96%) Strand = Plus / Minus Query: 409 caaacttcctacccttggagcgcacata 436 |||||||||| ||||||||||||||||| Sbjct: 521 caaacttcctgcccttggagcgcacata 494
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.024 Identities = 63/76 (82%) Strand = Plus / Minus Query: 361 caacttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctac 420 ||||||| ||||||||||| ||||||||| || || | ||||||||||| ||||| | Sbjct: 28486299 caacttataccttgaagcccttgctgttccttcttcctcttgccttctcaaatttccttc 28486240 Query: 421 ccttggagcgcacata 436 |||| ||||| ||||| Sbjct: 28486239 cctttgagcgaacata 28486224
>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0037D09 Length = 140470 Score = 48.1 bits (24), Expect = 0.024 Identities = 63/76 (82%) Strand = Plus / Minus Query: 361 caacttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctac 420 ||||||| ||||||||||| ||||||||| || || | ||||||||||| ||||| | Sbjct: 52051 caacttataccttgaagcccttgctgttccttcttcctcttgccttctcaaatttccttc 51992 Query: 421 ccttggagcgcacata 436 |||| ||||| ||||| Sbjct: 51991 cctttgagcgaacata 51976
>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0618H09 Length = 142306 Score = 48.1 bits (24), Expect = 0.024 Identities = 63/76 (82%) Strand = Plus / Minus Query: 361 caacttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctac 420 ||||||| ||||||||||| ||||||||| || || | ||||||||||| ||||| | Sbjct: 43840 caacttataccttgaagcccttgctgttccttcttcctcttgccttctcaaatttccttc 43781 Query: 421 ccttggagcgcacata 436 |||| ||||| ||||| Sbjct: 43780 cctttgagcgaacata 43765
>dbj|AK066329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060D13, full insert sequence Length = 850 Score = 48.1 bits (24), Expect = 0.024 Identities = 63/76 (82%) Strand = Plus / Minus Query: 361 caacttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctac 420 ||||||| ||||||||||| ||||||||| || || | ||||||||||| ||||| | Sbjct: 623 caacttataccttgaagcccttgctgttccttcttcctcttgccttctcaaatttccttc 564 Query: 421 ccttggagcgcacata 436 |||| ||||| ||||| Sbjct: 563 cctttgagcgaacata 548
>ref|NM_111432.2| Arabidopsis thaliana RPL18 (RIBOSOMAL PROTEIN L18); structural constituent of ribosome AT3G05590 (RPL18) mRNA, complete cds Length = 834 Score = 46.1 bits (23), Expect = 0.095 Identities = 53/63 (84%) Strand = Plus / Minus Query: 364 cttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccct 423 ||||||||||||| ||||| || |||||| | || | |||||||| |||||||| |||| Sbjct: 596 cttaaaccttgaatccacgactcttcctctttcctctggccttctcgaacttccttccct 537 Query: 424 tgg 426 ||| Sbjct: 536 tgg 534
>gb|AC011620.8|ATAC011620 Arabidopsis thaliana chromosome III BAC F18C1 genomic sequence, complete sequence Length = 100887 Score = 46.1 bits (23), Expect = 0.095 Identities = 53/63 (84%) Strand = Plus / Plus Query: 364 cttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccct 423 ||||||||||||| ||||| || |||||| | || | |||||||| |||||||| |||| Sbjct: 84357 cttaaaccttgaatccacgactcttcctctttcctctggccttctcgaacttccttccct 84416 Query: 424 tgg 426 ||| Sbjct: 84417 tgg 84419
>emb|CR734138.2|CNS0GT8P Tetraodon nigroviridis full-length cDNA Length = 641 Score = 46.1 bits (23), Expect = 0.095 Identities = 29/31 (93%) Strand = Plus / Minus Query: 406 tctcaaacttcctacccttggagcgcacata 436 ||||||||||||| ||||||||||| ||||| Sbjct: 548 tctcaaacttcctgcccttggagcggacata 518
>gb|AY037224.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds Length = 794 Score = 46.1 bits (23), Expect = 0.095 Identities = 53/63 (84%) Strand = Plus / Minus Query: 364 cttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccct 423 ||||||||||||| ||||| || |||||| | || | |||||||| |||||||| |||| Sbjct: 596 cttaaaccttgaatccacgactcttcctctttcctctggccttctcgaacttccttccct 537 Query: 424 tgg 426 ||| Sbjct: 536 tgg 534
>emb|BX822675.1|CNS0A7MK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZH02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 722 Score = 46.1 bits (23), Expect = 0.095 Identities = 53/63 (84%) Strand = Plus / Minus Query: 364 cttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccct 423 ||||||||||||| ||||| || |||||| | || | |||||||| |||||||| |||| Sbjct: 563 cttaaaccttgaatccacgactcttcctctttcctctggccttctcgaacttccttccct 504 Query: 424 tgg 426 ||| Sbjct: 503 tgg 501
>emb|BX823193.1|CNS0A5VT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB9ZC10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 575 Score = 46.1 bits (23), Expect = 0.095 Identities = 53/63 (84%) Strand = Plus / Minus Query: 364 cttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccct 423 ||||||||||||| ||||| || |||||| | || | |||||||| |||||||| |||| Sbjct: 345 cttaaaccttgaatccacgactcttcctctttcctctggccttctcgaacttccttccct 286 Query: 424 tgg 426 ||| Sbjct: 285 tgg 283
>emb|BX822829.1|CNS0A4S7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB67ZC09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 714 Score = 46.1 bits (23), Expect = 0.095 Identities = 53/63 (84%) Strand = Plus / Minus Query: 364 cttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccct 423 ||||||||||||| ||||| || |||||| | || | |||||||| |||||||| |||| Sbjct: 587 cttaaaccttgaatccacgactcttcctctttcctctggccttctcgaacttccttccct 528 Query: 424 tgg 426 ||| Sbjct: 527 tgg 525
>gb|U15741.1|ATU15741 Arabidopsis thaliana cytoplasmic ribosomal protein L18 mRNA, complete cds Length = 778 Score = 46.1 bits (23), Expect = 0.095 Identities = 53/63 (84%) Strand = Plus / Minus Query: 364 cttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccct 423 ||||||||||||| ||||| || |||||| | || | |||||||| |||||||| |||| Sbjct: 591 cttaaaccttgaatccacgactcttcctctttcctctggccttctcgaacttccttccct 532 Query: 424 tgg 426 ||| Sbjct: 531 tgg 529
>gb|BC106288.1| Xenopus laevis hypothetical protein MGC64299, mRNA (cDNA clone MGC:130777 IMAGE:7765587), complete cds Length = 664 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 ctcaaacttcctacccttggagcgcacata 436 ||||||||| |||||||||||| ||||||| Sbjct: 549 ctcaaactttctacccttggagagcacata 520
>gb|AY389931.1| Latimeria chalumnae ribosomal protein L18-like mRNA, partial sequence Length = 497 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 ctcaaacttcctacccttggagcgcacata 436 ||||||||||| ||||||||||||||||| Sbjct: 493 ctcaaacttccgtcccttggagcgcacata 464
>gb|BC053773.1| Xenopus laevis hypothetical protein MGC64299, mRNA (cDNA clone MGC:64299 IMAGE:6875152), complete cds Length = 682 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 ctcaaacttcctacccttggagcgcacata 436 ||||||||| |||||||||||| ||||||| Sbjct: 567 ctcaaactttctacccttggagagcacata 538
>emb|CR712898.2|CNS0GD0U Tetraodon nigroviridis full-length cDNA Length = 1093 Score = 44.1 bits (22), Expect = 0.38 Identities = 37/42 (88%) Strand = Plus / Plus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| |||||||| || ||||| Sbjct: 1012 accacgggccctctcaaacttcctgcccttggaacggacata 1053
>emb|CR634249.2|CNS0EOCV Tetraodon nigroviridis full-length cDNA Length = 639 Score = 44.1 bits (22), Expect = 0.38 Identities = 37/42 (88%) Strand = Plus / Minus Query: 395 accacgagccttctcaaacttcctacccttggagcgcacata 436 |||||| ||| ||||||||||||| ||| ||||||| ||||| Sbjct: 557 accacgggccctctcaaacttcctgcccctggagcggacata 516
>gb|AY060533.1| Arabidopsis thaliana AT3g05590/F18C1_14 mRNA, complete cds Length = 564 Score = 44.1 bits (22), Expect = 0.38 Identities = 52/62 (83%) Strand = Plus / Minus Query: 365 ttaaaccttgaagccacggctgttcctcctaccacgagccttctcaaacttcctaccctt 424 |||||||||||| ||||| || |||||| | || | |||||||| |||||||| ||||| Sbjct: 564 ttaaaccttgaatccacgactcttcctctttcctctggccttctcgaacttccttccctt 505 Query: 425 gg 426 || Sbjct: 504 gg 503
>emb|V01439.1|XLRIB2 Fragment of Xenopus laevis mRNA for ribosomal protein L14 Length = 509 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 ctcaaacttcctacccttggagcgcacata 436 ||||||||| |||||||||||| ||||||| Sbjct: 430 ctcaaactttctacccttggagagcacata 401
>emb|X05025.1|XLRPL14 Xenopus laevis gene for ribosomal protein L14 Length = 9124 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 ctcaaacttcctacccttggagcgcacata 436 ||||||||| |||||||||||| ||||||| Sbjct: 8304 ctcaaactttctacccttggagagcacata 8275
>emb|X06223.1|XLRPL14B Xenopus laevis mRNA for ribosomal protein L14b Length = 670 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Minus Query: 407 ctcaaacttcctacccttggagcgcacata 436 ||||||||| |||||||||||| ||||||| Sbjct: 584 ctcaaactttctacccttggagagcacata 555
>gb|AC151347.2| Xenopus tropicalis clone ISB-394A6, complete sequence Length = 78040 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 taaccagaaagggcaacttaaacct 372 |||||||||||||||| |||||||| Sbjct: 22091 taaccagaaagggcaagttaaacct 22115
>emb|BX649526.2| Mouse DNA sequence from clone RP23-227O6 on chromosome 2, complete sequence Length = 35131 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 caacaaaacatggtcttcaag 193 ||||||||||||||||||||| Sbjct: 5703 caacaaaacatggtcttcaag 5723
>gb|AC103353.7| Mus musculus chromosome 12, clone RP23-450G14, complete sequence Length = 191903 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 195 tcacaaaataaaaacagttgacagc 219 |||||||||||| |||||||||||| Sbjct: 81872 tcacaaaataaagacagttgacagc 81896
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 390 ctcctaccacgagccttctcaaacttcctacccttg 425 ||||||||||| ||| |||| |||||||| |||||| Sbjct: 936346 ctcctaccacgggccatctcgaacttcctgcccttg 936381
>gb|AC109901.5| Rattus norvegicus 11 BAC CH230-280C3 (Children's Hospital Oakland Research Institute) complete sequence Length = 155026 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 caagctcacaaaataaaaac 209 |||||||||||||||||||| Sbjct: 86836 caagctcacaaaataaaaac 86817
>gb|AC096338.17| Rattus norvegicus X BAC CH230-95I19 (Children's Hospital Oakland Research Institute) complete sequence Length = 236662 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 caagctcacaaaataaaaac 209 |||||||||||||||||||| Sbjct: 82496 caagctcacaaaataaaaac 82515
>gb|AC116516.7| Mus musculus chromosome 1, clone RP24-336H7, complete sequence Length = 134253 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 197 acaaaataaaaacagttgacagcc 220 ||||||||||||||||||| |||| Sbjct: 129533 acaaaataaaaacagttgagagcc 129510
>gb|AC107179.5| Rattus norvegicus 9 BAC CH230-155P21 (Children's Hospital Oakland Research Institute) complete sequence Length = 204235 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 caagctcacaaaataaaaac 209 |||||||||||||||||||| Sbjct: 22297 caagctcacaaaataaaaac 22278
>ref|XM_570671.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND03460) partial mRNA Length = 723 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 390 ctcctaccacgagccttctcaaacttcctacccttg 425 ||||||||||| ||| |||| |||||||| |||||| Sbjct: 554 ctcctaccacgggccatctcgaacttcctgcccttg 519
>ref|XM_570672.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CND03460) partial mRNA Length = 766 Score = 40.1 bits (20), Expect = 5.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 390 ctcctaccacgagccttctcaaacttcctacccttg 425 ||||||||||| ||| |||| |||||||| |||||| Sbjct: 597 ctcctaccacgggccatctcgaacttcctgcccttg 562
>emb|CR769783.10| Zebrafish DNA sequence from clone DKEY-40A23 in linkage group 1, complete sequence Length = 222035 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 acaaaataaaaacagttgac 216 |||||||||||||||||||| Sbjct: 25876 acaaaataaaaacagttgac 25895
>gb|AC113043.7| Mus musculus chromosome 1, clone RP23-243C7, complete sequence Length = 191557 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 acaaaataaaaacagttgacagcc 220 ||||||||||||||||||| |||| Sbjct: 162332 acaaaataaaaacagttgagagcc 162355
>emb|CR925773.4| Zebrafish DNA sequence from clone DKEY-88O9 in linkage group 10, complete sequence Length = 47169 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 agctcacaaaataaaaacag 211 |||||||||||||||||||| Sbjct: 34429 agctcacaaaataaaaacag 34410
>ref|XM_962949.1| PREDICTED: Tribolium castaneum similar to CG8615-PA (LOC656416), mRNA Length = 644 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 399 cgagccttctcaaacttcctacccttgg 426 |||||| ||||||||||||| ||||||| Sbjct: 554 cgagccctctcaaacttccttcccttgg 527
>gb|AC131631.5| Rattus norvegicus 2 BAC CH230-16C23 (Children's Hospital Oakland Research Institute) complete sequence Length = 207805 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 caagctcacaaaataaaaac 209 |||||||||||||||||||| Sbjct: 53755 caagctcacaaaataaaaac 53736
>gb|AC111460.6| Rattus norvegicus BAC CH230-211F21 (Children's Hospital Oakland Research Institute) complete sequence Length = 218573 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 caagctcacaaaataaaaac 209 |||||||||||||||||||| Sbjct: 184692 caagctcacaaaataaaaac 184673
>emb|BX537132.8| Zebrafish DNA sequence from clone RP71-8L21 in linkage group 1, complete sequence Length = 132287 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 acaaaataaaaacagttgac 216 |||||||||||||||||||| Sbjct: 113540 acaaaataaaaacagttgac 113521
>emb|BX957312.8| Zebrafish DNA sequence from clone CH211-146H22 in linkage group 10, complete sequence Length = 96069 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 agctcacaaaataaaaacag 211 |||||||||||||||||||| Sbjct: 57828 agctcacaaaataaaaacag 57847
>emb|CR385068.11| Zebrafish DNA sequence from clone CH211-245H7 in linkage group 19, complete sequence Length = 177489 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 caaaataaaaacagttgaca 217 |||||||||||||||||||| Sbjct: 27279 caaaataaaaacagttgaca 27260
>gb|BC093237.1| Danio rerio zgc:112166, mRNA (cDNA clone MGC:112166 IMAGE:7430738), complete cds Length = 1319 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 agctcacaaaataaaaacag 211 |||||||||||||||||||| Sbjct: 1072 agctcacaaaataaaaacag 1053
>gb|AC090431.9| Mus Musculus Strain C57BL6/J chromosome 14 RP23-324C9, complete sequence Length = 227949 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ttcatcagaattgcattagt 36 |||||||||||||||||||| Sbjct: 57969 ttcatcagaattgcattagt 57988
>ref|NM_001017722.1| Danio rerio zgc:112166 (zgc:112166), mRNA Length = 1319 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 agctcacaaaataaaaacag 211 |||||||||||||||||||| Sbjct: 1072 agctcacaaaataaaaacag 1053
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcaacttaaaccttgaagcc 379 |||||||||||||||||||| Sbjct: 14480751 gcaacttaaaccttgaagcc 14480732
>gb|AC156274.8| Mus musculus 10 BAC RP24-286P15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 177364 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 attgccagcagagaattcta 160 |||||||||||||||||||| Sbjct: 153061 attgccagcagagaattcta 153042
>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence Length = 196848 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 tcacaaaataaaaacagttg 214 |||||||||||||||||||| Sbjct: 154599 tcacaaaataaaaacagttg 154580
>dbj|AP004134.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_C12 Length = 116758 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gcaacttaaaccttgaagcc 379 |||||||||||||||||||| Sbjct: 89249 gcaacttaaaccttgaagcc 89230
>emb|BX255950.7| Zebrafish DNA sequence from clone CH211-250K6 in linkage group 5, complete sequence Length = 151104 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 aaaataaaaacagttgacag 218 |||||||||||||||||||| Sbjct: 140896 aaaataaaaacagttgacag 140877
>emb|AJ306691.1|SSA306691 Salmo salar partial mRNA for L18 ribosomal protein (l18 gene) Length = 541 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 407 ctcaaacttcctacccttggagcg 430 |||||||||||| ||||||||||| Sbjct: 504 ctcaaacttcctgcccttggagcg 481
>emb|CR762427.15| Zebrafish DNA sequence from clone DKEY-253I9 in linkage group 1, complete sequence Length = 209003 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 acaaaataaaaacagttgac 216 |||||||||||||||||||| Sbjct: 204107 acaaaataaaaacagttgac 204088
>gb|AC153547.3| Mus musculus 10 BAC RP23-429B12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 206024 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 attgccagcagagaattcta 160 |||||||||||||||||||| Sbjct: 193741 attgccagcagagaattcta 193760
>emb|AL732392.8| Mouse DNA sequence from clone RP23-171G10 on chromosome X, complete sequence Length = 188116 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 agcagagaattctaagagac 166 |||||||||||||||||||| Sbjct: 9652 agcagagaattctaagagac 9671 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,535,664 Number of Sequences: 3902068 Number of extensions: 4535664 Number of successful extensions: 84318 Number of sequences better than 10.0: 142 Number of HSP's better than 10.0 without gapping: 142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84012 Number of HSP's gapped (non-prelim): 305 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)