>COBL6_ARATH (O04500) COBRA-like protein 6 precursor|
          Length = 454

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -1

Query: 142 SVWVYGLQFGPESGPGCCLSLFAYYYGHFV 53
           +V VY  QF     P CC+SL A+YY + V
Sbjct: 217 AVCVYS-QFRSSPSPKCCVSLSAFYYQNIV 245

>TRUB_LEGPA (Q5X1C5) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 52  TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 165
           T    NN+   L+ +QD+ L Q  A +  ++ +I+HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAIQHLT 242

>ISPZ_HAEDU (Q7VKZ1) Probable intracellular septation protein|
          Length = 183

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -3

Query: 170 KPVR*RMLVFSLGIRASVWSRVR-SWMLFKFICLLLRAL 57
           KPV   +L   L +   VW+R+   W +F  IC+L+  +
Sbjct: 98  KPVVKMLLAKELSLPTQVWNRLNLGWAIFFIICMLINII 136

>TRUB_LEGPL (Q5WT38) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 52  TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 165
           T    NN+   L+ +QD+ L Q  A +  ++ +++HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAVQHLT 242

>TRUB_LEGPH (Q5ZRV6) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 303

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 52  TQSARNNKQINLNNIQDLTLDQTEARIPKLNTSIRHLT 165
           T    NN+   L+ +QD+ L Q  A +  ++ +++HLT
Sbjct: 205 TAGFENNRMYTLDELQDMPLSQRLACLIPIDQAVQHLT 242

>CRK_XENLA (P87378) SH2/SH3 adaptor crk (Adapter molecule crk) (CRK2)|
          Length = 296

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = +3

Query: 78  NKLKQHPGPDSGPN*SPYTQTEHKHPSPN 164
           N+   HP P  GP   PY Q     P PN
Sbjct: 197 NQENSHPQPLGGPEPGPYAQPSVNTPLPN 225


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,414,204
Number of Sequences: 219361
Number of extensions: 443655
Number of successful extensions: 1317
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1296
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)