ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474682.1| Oryza sativa (japonica cultivar-group), predic... 92 2e-15
2dbj|AK067970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
4emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4,... 72 2e-09
5emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4,... 72 2e-09
6gb|AY110514.1| Zea mays CL948_1 mRNA sequence 70 7e-09
7dbj|AB033504.1| Populus euramericana peaco-1 mRNA for 1-aminocyc... 46 0.097
8gb|AY706156.1| Fragaria x ananassa 1-aminocyclopropane-1-carboxy... 44 0.39
9emb|AJ851828.1| Fragaria x ananassa partial mRNA for 1-aminocycl... 44 0.39
10emb|X77232.1|PPPAO1 P.persica PAO1 mRNA for 1-aminocyclopropane-... 44 0.39
11gb|AF319166.1|AF319166 Prunus persica 1-aminocyclopropane 1-carb... 44 0.39
12gb|AF129073.1|AF129073 Prunus persica 1-aminocyclopropane-1-carb... 44 0.39
13dbj|AB042105.1| Pyrus pyrifolia PPAOX2A mRNA for 1-aminocyclopro... 44 0.39
14gb|AF532976.1| Prunus persica 1-aminocyclopropane-1-carboxylate ... 44 0.39
15dbj|AB044711.1| Prunus persica PP-ACO1 mRNA for 1-aminocycloprop... 44 0.39
16emb|BX640466.9| Zebrafish DNA sequence from clone CH211-138A11 i... 42 1.5
17emb|AL844145.9| Mouse DNA sequence from clone RP23-403F4 on chro... 42 1.5
18gb|AY557991.1| Saccharomyces cerevisiae clone FLH005561.01X YMR3... 40 6.0
19gb|AY285141.1| HIV-1 isolate BR02RJ50 from Brazil protease (pol)... 40 6.0
20gb|AC129919.9| Homo sapiens chromosome 17, clone RP13-1277B16, c... 40 6.0
21gb|AC115099.6| Homo sapiens chromosome 17, clone RP11-149I9, com... 40 6.0
22gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete s... 40 6.0
23gb|AC146817.10| Medicago truncatula clone mth2-8c19, complete se... 40 6.0
24emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 o... 40 6.0
25emb|Z54141.1|SC9924 S.cerevisiae chromosome XIII cosmid 9924 40 6.0
26emb|AJ297350.1|CSI297350 Citrus sinensis partial mRNA for ACC ox... 40 6.0
27gb|AF321533.1|AF321533 Citrus sinensis ACC oxidase mRNA, complet... 40 6.0
28gb|AC127496.5| Homo sapiens chromosome 17, clone CTD-2561B21, co... 40 6.0
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.0
30ref|XM_342414.2| PREDICTED: Rattus norvegicus SH2 domain contain... 40 6.0
31gb|AC008772.6|AC008772 Homo sapiens chromosome 5 clone CTD-2016O... 40 6.0
32dbj|AB104726.1| Homo sapiens IRSp53 gene for insulin receptor su... 40 6.0
33emb|CR381582.9| Zebrafish DNA sequence from clone DKEY-28M3 in l... 40 6.0
34gb|AC006211.1|AC006211 Homo sapiens chromosome 18, clone hRPK.53... 40 6.0
35dbj|AP002478.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 6.0
36emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 ... 40 6.0
37gb|DQ295921.1| Citrus unshiu 1-aminocyclopropane-1-carboxylate o... 40 6.0
38gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10,... 40 6.0
39gb|AC168209.7| Mus musculus chromosome 5, clone RP24-392C11, com... 40 6.0
40gb|L34347.1|YSCPRE5A Saccharomyces cerevisiae (clone lambdaPM-28... 40 6.0
41gb|AC092957.6| Homo sapiens 3 BAC RP11-635I10 (Roswell Park Canc... 40 6.0 
>ref|XM_474682.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1128

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 112/134 (83%)
 Strand = Plus / Minus

                                                                       
Query: 311 atcgagaccctcggtgcatcgttcttcgcaatgactctgtgctccacactcttaaacctg 370
           |||||||| |||||| ||  ||||||||| |  ||||| ||||||||||||||  |  ||
Sbjct: 941 atcgagactctcggttcagtgttcttcgccaccactctatgctccacactcttgtaattg 882

                                                                       
Query: 371 tcattcgagatcatctgtaagagatcgcccacattgacgatgaacgcccctggtgttggc 430
           ||||| ||||||| ||| | ||||||| | ||||||||||||||||| || || ||||||
Sbjct: 881 tcattggagatcaactgcaggagatcggcaacattgacgatgaacgctccaggagttggc 822

                         
Query: 431 gtgacgtcgaccca 444
           ||||| ||||||||
Sbjct: 821 gtgacatcgaccca 808



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213  cgagtgtctccctatacaacggcgggttcttctccgacagcagctccttgatggggccat 272
            |||||| |||||| ||||| ||||||||||  || |||| |||||||||||| |||||||
Sbjct: 1048 cgagtgcctccctgtacaaaggcgggttctcatcagacaacagctccttgatcgggccat 989

                    
Query: 273  acatcctc 280
            ||||||||
Sbjct: 988  acatcctc 981
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>dbj|AK067970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124E20, full
           insert sequence
          Length = 1387

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 112/134 (83%)
 Strand = Plus / Minus

                                                                       
Query: 311 atcgagaccctcggtgcatcgttcttcgcaatgactctgtgctccacactcttaaacctg 370
           |||||||| |||||| ||  ||||||||| |  ||||| ||||||||||||||  |  ||
Sbjct: 951 atcgagactctcggttcagtgttcttcgccaccactctatgctccacactcttgtaattg 892

                                                                       
Query: 371 tcattcgagatcatctgtaagagatcgcccacattgacgatgaacgcccctggtgttggc 430
           ||||| ||||||| ||| | ||||||| | ||||||||||||||||| || || ||||||
Sbjct: 891 tcattggagatcaactgcaggagatcggcaacattgacgatgaacgctccaggagttggc 832

                         
Query: 431 gtgacgtcgaccca 444
           ||||| ||||||||
Sbjct: 831 gtgacatcgaccca 818



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                        
Query: 213  cgagtgtctccctatacaacggcgggttcttctccgacagcagctccttgatggggccat 272
            |||||| |||||| ||||| ||||||||||  || |||| |||||||||||| |||||||
Sbjct: 1058 cgagtgcctccctgtacaaaggcgggttctcatcagacaacagctccttgatcgggccat 999

                    
Query: 273  acatcctc 280
            ||||||||
Sbjct: 998  acatcctc 991
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                           
Query: 213     cgagtgtctccctatacaacggcgggttcttctccgacagcagctccttgatggggccat 272
               |||||| |||||| ||||| ||||||||||  || |||| |||||||||||| |||||||
Sbjct: 5557191 cgagtgcctccctgtacaaaggcgggttctcatcagacaacagctccttgatcgggccat 5557132

                       
Query: 273     acatcctc 280
               ||||||||
Sbjct: 5557131 acatcctc 5557124



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                     
Query: 391     gagatcgcccacattgacgatgaacgcccctggtgttggcgtgacgtcgaccca 444
               ||||||| | ||||||||||||||||| || || ||||||||||| ||||||||
Sbjct: 5556897 gagatcggcaacattgacgatgaacgctccaggagttggcgtgacatcgaccca 5556844



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                    
Query: 311     atcgagaccctcggtgcatcgttcttcgcaatgactctgtgctccacactctt 363
               |||||||| |||||| ||  ||||||||| |  ||||| ||||||||||||||
Sbjct: 5557084 atcgagactctcggttcagtgttcttcgccaccactctatgctccacactctt 5557032
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>emb|AL662994.3|OSJN00192 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006L01,
             complete sequence
          Length = 162227

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                         
Query: 213   cgagtgtctccctatacaacggcgggttcttctccgacagcagctccttgatggggccat 272
             |||||| |||||| ||||| ||||||||||  || |||| |||||||||||| |||||||
Sbjct: 14398 cgagtgcctccctgtacaaaggcgggttctcatcagacaacagctccttgatcgggccat 14339

                     
Query: 273   acatcctc 280
             ||||||||
Sbjct: 14338 acatcctc 14331



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 391   gagatcgcccacattgacgatgaacgcccctggtgttggcgtgacgtcgaccca 444
             ||||||| | ||||||||||||||||| || || ||||||||||| ||||||||
Sbjct: 14104 gagatcggcaacattgacgatgaacgctccaggagttggcgtgacatcgaccca 14051



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 311   atcgagaccctcggtgcatcgttcttcgcaatgactctgtgctccacactctt 363
             |||||||| |||||| ||  ||||||||| |  ||||| ||||||||||||||
Sbjct: 14291 atcgagactctcggttcagtgttcttcgccaccactctatgctccacactctt 14239
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>emb|AL662934.3|OSJN00136 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027O01,
              complete sequence
          Length = 150283

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Minus

                                                                          
Query: 213    cgagtgtctccctatacaacggcgggttcttctccgacagcagctccttgatggggccat 272
              |||||| |||||| ||||| ||||||||||  || |||| |||||||||||| |||||||
Sbjct: 111821 cgagtgcctccctgtacaaaggcgggttctcatcagacaacagctccttgatcgggccat 111762

                      
Query: 273    acatcctc 280
              ||||||||
Sbjct: 111761 acatcctc 111754



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 391    gagatcgcccacattgacgatgaacgcccctggtgttggcgtgacgtcgaccca 444
              ||||||| | ||||||||||||||||| || || ||||||||||| ||||||||
Sbjct: 111527 gagatcggcaacattgacgatgaacgctccaggagttggcgtgacatcgaccca 111474



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                   
Query: 311    atcgagaccctcggtgcatcgttcttcgcaatgactctgtgctccacactctt 363
              |||||||| |||||| ||  ||||||||| |  ||||| ||||||||||||||
Sbjct: 111714 atcgagactctcggttcagtgttcttcgccaccactctatgctccacactctt 111662
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>gb|AY110514.1| Zea mays CL948_1 mRNA sequence
          Length = 1344

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 182  acagagtagtaatgcgcgacatagtccctggcgagtgtctccctatacaacggcgggttc 241
            |||||||||||| | || ||||| || ||  ||||||| ||||||||||| || ||||||
Sbjct: 1066 acagagtagtaacgtgcaacatactctctcacgagtgtttccctatacaaaggagggttc 1007

                                   
Query: 242  ttctccgacagcagctccttgat 264
            | ||| |||||||||||||||||
Sbjct: 1006 tcctcggacagcagctccttgat 984
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>dbj|AB033504.1| Populus euramericana peaco-1 mRNA for
           1-aminocyclopropane-1-carboxylate oxidase, complete cds
          Length = 1204

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 338 gcaatgactctgtgctccacactctta 364
           ||||| |||||||||||||||||||||
Sbjct: 745 gcaatcactctgtgctccacactctta 719
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>gb|AY706156.1| Fragaria x ananassa 1-aminocyclopropane-1-carboxylate oxidase mRNA,
           complete cds
          Length = 1248

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 338 gcaatgactctgtgctccacactctt 363
           ||||| ||||||||||||||||||||
Sbjct: 789 gcaatcactctgtgctccacactctt 764
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>emb|AJ851828.1| Fragaria x ananassa partial mRNA for
           1-aminocyclopropane-1-carboxylate oxidase (aco1 gene)
          Length = 767

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 338 gcaatgactctgtgctccacactctt 363
           ||||| ||||||||||||||||||||
Sbjct: 616 gcaatcactctgtgctccacactctt 591
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>emb|X77232.1|PPPAO1 P.persica PAO1 mRNA for 1-aminocyclopropane-1-carboxylate oxidase
          Length = 1374

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 338 gcaatgactctgtgctccacactctt 363
           ||||| ||||||||||||||||||||
Sbjct: 762 gcaatcactctgtgctccacactctt 737
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>gb|AF319166.1|AF319166 Prunus persica 1-aminocyclopropane 1-carboxylic acid oxidase mRNA,
           complete cds
          Length = 1240

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 338 gcaatgactctgtgctccacactctt 363
           ||||| ||||||||||||||||||||
Sbjct: 745 gcaatcactctgtgctccacactctt 720
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>gb|AF129073.1|AF129073 Prunus persica 1-aminocyclopropane-1-carboxylate oxidase (ACO1) gene,
            complete cds
          Length = 2435

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 338  gcaatgactctgtgctccacactctt 363
            ||||| ||||||||||||||||||||
Sbjct: 1823 gcaatcactctgtgctccacactctt 1798
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>dbj|AB042105.1| Pyrus pyrifolia PPAOX2A mRNA for 1-aminocyclopropane-1-carboxylate
           oxidase, complete cds
          Length = 1176

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 338 gcaatgactctgtgctccacactctt 363
           ||||| ||||||||||||||||||||
Sbjct: 765 gcaatcactctgtgctccacactctt 740
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>gb|AF532976.1| Prunus persica 1-aminocyclopropane-1-carboxylate oxidase (ACO1) gene,
            complete cds.~~
          Length = 5201

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 338  gcaatgactctgtgctccacactctt 363
            ||||| ||||||||||||||||||||
Sbjct: 3945 gcaatcactctgtgctccacactctt 3920
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>dbj|AB044711.1| Prunus persica PP-ACO1 mRNA for 1-aminocyclopropane-1-carboxylate
           oxidase, partial cds
          Length = 804

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 338 gcaatgactctgtgctccacactctt 363
           ||||| ||||||||||||||||||||
Sbjct: 611 gcaatcactctgtgctccacactctt 586
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>emb|BX640466.9| Zebrafish DNA sequence from clone CH211-138A11 in linkage group 2,
              complete sequence
          Length = 182577

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 121    aggattttcctgacaaattcaaaga 145
              ||||||||||||| |||||||||||
Sbjct: 172375 aggattttcctgaaaaattcaaaga 172399
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>emb|AL844145.9| Mouse DNA sequence from clone RP23-403F4 on chromosome 2, complete
             sequence
          Length = 173053

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 342   tgactctgtgctccacactct 362
             |||||||||||||||||||||
Sbjct: 66158 tgactctgtgctccacactct 66138
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>gb|AY557991.1| Saccharomyces cerevisiae clone FLH005561.01X YMR315W gene, complete
           cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 121 aggattttcctgacaaattcaaag 144
           |||| |||||||||||||||||||
Sbjct: 71  aggaatttcctgacaaattcaaag 94
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>gb|AY285141.1| HIV-1 isolate BR02RJ50 from Brazil protease (pol) gene, partial cds
          Length = 191

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 attttcctgacaaattcaaa 143
           ||||||||||||||||||||
Sbjct: 130 attttcctgacaaattcaaa 111
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>gb|AC129919.9| Homo sapiens chromosome 17, clone RP13-1277B16, complete sequence
          Length = 182735

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   catctgtaagagatcgccca 401
             ||||||||||||||||||||
Sbjct: 34719 catctgtaagagatcgccca 34700
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>gb|AC115099.6| Homo sapiens chromosome 17, clone RP11-149I9, complete sequence
          Length = 161156

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   catctgtaagagatcgccca 401
             ||||||||||||||||||||
Sbjct: 23671 catctgtaagagatcgccca 23652
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>gb|AC142498.21| Medicago truncatula clone mth2-24a18, complete sequence
          Length = 114956

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  actctgtgctccacactctt 363
            ||||||||||||||||||||
Sbjct: 4729 actctgtgctccacactctt 4748
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>gb|AC146817.10| Medicago truncatula clone mth2-8c19, complete sequence
          Length = 114343

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 344  actctgtgctccacactcttaaacctgtcatt 375
            ||||||||||| |||||||| || ||||||||
Sbjct: 7204 actctgtgctcaacactcttgaatctgtcatt 7235
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>emb|AL021579.1|HS598F2 Human DNA sequence from clone RP4-598F2 on chromosome 1q23.1-24.3
             Contains part of the gene for HBxAg transactivated protein
             2 (XTP2), complete sequence
          Length = 99886

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    acacaaagttcccttgaaat 59
             ||||||||||||||||||||
Sbjct: 45941 acacaaagttcccttgaaat 45960
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>emb|Z54141.1|SC9924 S.cerevisiae chromosome XIII cosmid 9924
          Length = 30812

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 121  aggattttcctgacaaattcaaag 144
            |||| |||||||||||||||||||
Sbjct: 9252 aggaatttcctgacaaattcaaag 9275
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>emb|AJ297350.1|CSI297350 Citrus sinensis partial mRNA for ACC oxidase (aco-1 gene)
          Length = 392

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 actctgtgctccacactctt 363
           ||||||||||||||||||||
Sbjct: 188 actctgtgctccacactctt 169
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>gb|AF321533.1|AF321533 Citrus sinensis ACC oxidase mRNA, complete cds
          Length = 1217

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 actctgtgctccacactctt 363
           ||||||||||||||||||||
Sbjct: 781 actctgtgctccacactctt 762
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>gb|AC127496.5| Homo sapiens chromosome 17, clone CTD-2561B21, complete sequence
          Length = 166274

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   catctgtaagagatcgccca 401
             ||||||||||||||||||||
Sbjct: 12099 catctgtaagagatcgccca 12118
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 232     cggcgggttcttctccgacagcagctcc 259
               |||||||| |||| ||||||||||||||
Sbjct: 3070683 cggcgggtacttcgccgacagcagctcc 3070656
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>ref|XM_342414.2| PREDICTED: Rattus norvegicus SH2 domain containing 3C (predicted)
            (Sh2d3c_predicted), mRNA
          Length = 2175

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 244  ctccgacagcagctccttga 263
            ||||||||||||||||||||
Sbjct: 1344 ctccgacagcagctccttga 1325
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>gb|AC008772.6|AC008772 Homo sapiens chromosome 5 clone CTD-2016O11, complete sequence
          Length = 114992

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 343    gactctgtgctccacactct 362
              ||||||||||||||||||||
Sbjct: 102615 gactctgtgctccacactct 102634
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>dbj|AB104726.1| Homo sapiens IRSp53 gene for insulin receptor substrate p53 L-form,
            M-form, T-form and S-form, complete cds, alternative
            splicing
          Length = 82262

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  catctgtaagagatcgccca 401
            ||||||||||||||||||||
Sbjct: 1127 catctgtaagagatcgccca 1108
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>emb|CR381582.9| Zebrafish DNA sequence from clone DKEY-28M3 in linkage group 18, complete
              sequence
          Length = 215124

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    caaaatcataaaaggatttt 128
              ||||||||||||||||||||
Sbjct: 128005 caaaatcataaaaggatttt 128024
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>gb|AC006211.1|AC006211 Homo sapiens chromosome 18, clone hRPK.537_E_1, complete sequence
          Length = 217421

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    gaaaatatctgaatacacaa 45
             ||||||||||||||||||||
Sbjct: 23840 gaaaatatctgaatacacaa 23821
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>dbj|AP002478.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874J12, complete
             sequence
          Length = 226147

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    gaaaatatctgaatacacaa 45
             ||||||||||||||||||||
Sbjct: 47229 gaaaatatctgaatacacaa 47248
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>emb|CT573029.5| M.truncatula DNA sequence from clone MTH2-67H11 on chromosome 3, complete
              sequence
          Length = 152399

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    actctgtgctccacactctt 363
              ||||||||||||||||||||
Sbjct: 105648 actctgtgctccacactctt 105629
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>gb|DQ295921.1| Citrus unshiu 1-aminocyclopropane-1-carboxylate oxidase mRNA,
           partial cds
          Length = 834

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 344 actctgtgctccacactctt 363
           ||||||||||||||||||||
Sbjct: 632 actctgtgctccacactctt 613
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>gb|AC172879.1| Brassica rapa subsp. pekinensis clone KBrH070I10, complete sequence
          Length = 107205

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    aaaatcataaaaggattttc 129
              ||||||||||||||||||||
Sbjct: 104765 aaaatcataaaaggattttc 104746
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>gb|AC168209.7| Mus musculus chromosome 5, clone RP24-392C11, complete sequence
          Length = 140911

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   tgttgccaaaatcataaaag 122
             ||||||||||||||||||||
Sbjct: 88176 tgttgccaaaatcataaaag 88157
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>gb|L34347.1|YSCPRE5A Saccharomyces cerevisiae (clone lambdaPM-2806) 20S proteasome
            alpha-type subunit (PRE5), complete cds
          Length = 2141

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 121  aggattttcctgacaaattcaaag 144
            |||| |||||||||||||||||||
Sbjct: 2086 aggaatttcctgacaaattcaaag 2109
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>gb|AC092957.6| Homo sapiens 3 BAC RP11-635I10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161585

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    ccaattgttgccaaaatcat 117
             ||||||||||||||||||||
Sbjct: 62424 ccaattgttgccaaaatcat 62405


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,173,897
Number of Sequences: 3902068
Number of extensions: 3173897
Number of successful extensions: 59384
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59288
Number of HSP's gapped (non-prelim): 96
length of query: 447
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 425
effective length of database: 17,147,199,772
effective search space: 7287559903100
effective search space used: 7287559903100
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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