Clone Name	rbart25d01
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clon...	172	7e-40
2	gb|AY103836.1| Zea mays PCO135053 mRNA sequence	163	7e-37
3	gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induc...	151	3e-33
4	ref|XM_468970.1| Oryza sativa (japonica cultivar-group), mRNA	117	4e-23
5	emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides m...	107	3e-20
6	emb|AJ843999.1| Plantago major mRNA for auxin resistance protein...	103	5e-19
7	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	100	8e-18
8	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	100	8e-18
9	emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb...	100	8e-18
10	gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced prote...	98	3e-17
11	gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protei...	90	8e-15
12	dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypoc...	90	8e-15
13	ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription facto...	70	7e-09
14	gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, com...	70	7e-09
15	gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, com...	70	7e-09
16	dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced prot...	70	7e-09
17	gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induc...	70	7e-09
18	emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Co...	70	7e-09
19	emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Co...	70	7e-09
20	gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete s...	70	7e-09
21	gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (I...	70	7e-09
22	dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone...	68	3e-08
23	ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); tra...	66	1e-07
24	gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, comp...	66	1e-07
25	gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, pa...	66	1e-07
26	ref|XM_469684.1| Oryza sativa (japonica cultivar-group), mRNA	62	2e-06
27	emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative ...	62	2e-06
28	dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clon...	62	2e-06
29	dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clon...	62	2e-06
30	dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clon...	62	2e-06
31	gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, parti...	60	7e-06
32	gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mR...	60	7e-06
33	emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Co...	60	7e-06
34	gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated pro...	58	3e-05
35	gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, parti...	56	1e-04
36	emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1...	56	1e-04
37	emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides m...	54	4e-04
38	emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides m...	52	0.002
39	gb|DQ191056.1| Glycine max clone DD8.1 SP-6 mRNA, complete cds	50	0.007
40	gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds	50	0.007
41	gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRN...	50	0.007
42	gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regul...	48	0.027
43	ref|NM_100306.2| Arabidopsis thaliana AXR3 (AUXIN RESISTANT 3); ...	46	0.11
44	gb|AC115751.6| Mus musculus chromosome 1, clone RP23-16I21, comp...	46	0.11
45	gb|AC138640.7| Mus musculus chromosome 1, clone RP23-463G19, com...	46	0.11
46	gb|AF336916.1| Arabidopsis thaliana auxin-induced protein, IAA17...	46	0.11
47	gb|AY117183.1| Arabidopsis thaliana auxin-induced protein IAA17/...	46	0.11
48	gb|AY070094.1| Arabidopsis thaliana auxin-induced protein IAA17/...	46	0.11
49	emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in ...	46	0.11
50	dbj|AK221076.1| Arabidopsis thaliana mRNA for putative auxin-ind...	46	0.11
51	gb|AY087284.1| Arabidopsis thaliana clone 33613 mRNA, complete s...	46	0.11
52	gb|U49073.1|ATU49073 Arabidopsis thaliana early auxin-induced (I...	46	0.11
53	emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA ...	44	0.43
54	emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, ...	44	0.43
55	gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, compl...	44	0.43
56	gb|AF123504.1|AF123504 Nicotiana tabacum Nt-iaa2.3 deduced prote...	44	0.43
57	ref|NM_123385.2| Arabidopsis thaliana unknown protein AT5G40210 ...	42	1.7
58	ref|XM_513609.1| PREDICTED: Pan troglodytes similar to syntaxin ...	42	1.7
59	gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence	42	1.7
60	gb|AC091781.20| Trypanosoma brucei chromosome 4 clone RPCI93-30K...	42	1.7
61	gb|AC159410.1| Trypanosoma brucei chromosome 4 clone RPCI93-1D20...	42	1.7
62	ref|NM_001033838.1| Ciona intestinalis LIM and SH3 protein (lasp...	42	1.7
63	gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome...	42	1.7
64	gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome...	42	1.7
65	gb|AC138767.7| Mus musculus chromosome 12, clone RP23-454K24, co...	42	1.7
66	gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated pro...	42	1.7
67	gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, comp...	42	1.7
68	gb|AC091879.2| Homo sapiens chromosome 5 clone CTD-3136G21, comp...	42	1.7
69	gb|AF412089.1|AF412089 Arabidopsis thaliana AT5g40210/MSN9_110 m...	42	1.7
70	gb|AC157515.2| Mus musculus BAC clone RP24-226N22 from chromosom...	42	1.7
71	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
72	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
73	gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds	42	1.7
74	dbj|AB182287.1| Ciona intestinalis mRNA for lasp, complete cds	42	1.7
75	gb|AC068121.8| Homo sapiens BAC clone RP11-181P21 from 2, comple...	42	1.7
76	dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.7
77	emb|AL672124.13| Mouse DNA sequence from clone RP23-392H8 on chr...	42	1.7
78	dbj|AB010699.1| Arabidopsis thaliana genomic DNA, chromosome 5, ...	42	1.7
79	emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (c...	42	1.7
80	gb|AC105989.14| Mus musculus chromosome 8, clone RP24-95N3, comp...	42	1.7
81	emb|AL929326.9| Zebrafish DNA sequence from clone BUSM1-SL11 in ...	42	1.7
82	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	42	1.7
83	gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome...	40	6.7
84	gb|AC103379.8| Mus musculus chromosome 13, clone RP24-245I24, co...	40	6.7
85	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	40	6.7
86	gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosom...	40	6.7
87	gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genom...	40	6.7
88	emb|CT025566.7| Mouse DNA sequence from clone RP24-151A22 on chr...	40	6.7
89	gb|AC121947.2| Mus musculus BAC clone RP24-213L3 from 13, comple...	40	6.7
90	ref|XM_652254.1| Entamoeba histolytica HM-1:IMSS hypothetical pr...	40	6.7
91	gb|AY337616.1| Gossypium barbadense Gbiaa-Re (iaa-re) mRNA, comp...	40	6.7
92	emb|AL513493.11| Human DNA sequence from clone RP11-433N2 on chr...	40	6.7
93	emb|AL391994.28| Human DNA sequence from clone RP11-382D8 on chr...	40	6.7
94	emb|AL450346.4| Human DNA sequence from clone RP11-184C23 on chr...	40	6.7
95	emb|AL357712.10| Human DNA sequence from clone GS1-756B1 on chro...	40	6.7
96	emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chrom...	40	6.7
97	emb|AL049541.24|HSJ991B18 Human DNA sequence from clone RP5-991B...	40	6.7
98	gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, part...	40	6.7
99	gb|AC105024.8| Homo sapiens chromosome 17, clone CTD-2132N18, co...	40	6.7
100	emb|CR926468.3| Mouse DNA sequence from clone RP24-191A5 on chro...	40	6.7
101	emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in...	40	6.7
102	gb|AC010760.8| Homo sapiens chromosome , clone RP11-2F9, complet...	40	6.7
103	gb|AC100733.16| Mus musculus chromosome 15, clone RP24-312H21, c...	40	6.7
104	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.7
105	gb|AY254569.1| Gossypium barbadense auxin responsive protein IAA...	40	6.7
106	gb|AC136355.7| Homo sapiens chromosome 15, clone RP11-54M9, comp...	40	6.7
107	gb|AC135068.5| Homo sapiens chromosome 15, clone RP11-294C11, co...	40	6.7
108	gb|AC134981.6| Homo sapiens chromosome 15, clone RP11-361C13, co...	40	6.7
109	gb|AC134980.3| Homo sapiens chromosome 15, clone RP11-69H14, com...	40	6.7
110	gb|AC171780.2| Homo sapiens chromosome 15, clone RP11-350K22, co...	40	6.7
111	gb|AC117708.10| Mus musculus chromosome 7, clone RP23-474J16, co...	40	6.7
112	gb|AC171558.2| Homo sapiens chromosome 15, clone RP11-983G14, co...	40	6.7
113	emb|AL512310.4|CNS07EF1 Human chromosome 14 DNA sequence BAC R-5...	40	6.7
114	dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone...	40	6.7
115	emb|AL732527.6| Mouse DNA sequence from clone RP23-259B18 on chr...	40	6.7
116	emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chro...	40	6.7
117	dbj|D86559.1| Glycyrrhiza glabra mRNA for polyketide reductase (...	40	6.7

---

>dbj|AK068213.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149K13, full
            insert sequence
          Length = 1545

 Score =  172 bits (87), Expect = 7e-40
 Identities = 108/115 (93%)
 Strand = Plus / Minus

                                                                        
Query: 376  ctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatc 435
            ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 1087 ctcagcttctgttcttgcatttctccattgccctcggtgcaaggccaatagcttctgatc 1028

                                                                   
Query: 436  ctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
            |||||||||||| ||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 1027 ctttcattatcctaaggcgcttgcatgattcaacaaacatctcccatgggacgtc 973



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 38/43 (88%), Gaps = 3/43 (6%)
 Strand = Plus / Minus

                                                       
Query: 172  acatgttcttggcttcttctttcttatgtatataacaagatga 214
            ||||||||||||||||||   |||||||||||  |||||||||
Sbjct: 1339 acatgttcttggcttctt---tcttatgtataagacaagatga 1300



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 42   agggtgcctttgcattttgtgcca 65
            ||||||||||| ||||||||||||
Sbjct: 1442 agggtgcctttacattttgtgcca 1419

---

>gb|AY103836.1| Zea mays PCO135053 mRNA sequence
          Length = 1519

 Score =  163 bits (82), Expect = 7e-37
 Identities = 103/110 (93%)
 Strand = Plus / Minus

                                                                       
Query: 375 cctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgat 434
           |||||||| |||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 998 cctcagcttctgttcttgcatttctccatggcccttggtgccaggccaatggcttctgat 939

                                                             
Query: 435 cctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgg 484
           |||||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct: 938 cctttcatgatccgaaggcgcttgcatgattcgacgaacatctcccacgg 889



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 42   agggtgcctttgcattttgtgcca 65
            ||||||||||||||| ||||||||
Sbjct: 1356 agggtgcctttgcatcttgtgcca 1333

---

>gb|AY781902.1| Saccharum hybrid cultivar isolate c57 auxin-induced protein mRNA,
           partial cds
          Length = 1046

 Score =  151 bits (76), Expect = 3e-33
 Identities = 106/116 (91%)
 Strand = Plus / Minus

                                                                       
Query: 375 cctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgat 434
           |||||||| |||||||||||||||||||| ||||| || || |||||||| |||||||||
Sbjct: 571 cctcagcttctgttcttgcatttctccatggccctcggcgcgaggccaatggcttctgat 512

                                                                   
Query: 435 cctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           |||||||| |||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct: 511 cctttcatgatccgaaggcgcttgcatgattcgacgaacatctcccacggcacgtc 456



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 42  agggtgcctttgcattttgtgcca 65
           ||||||||||||||||||||||||
Sbjct: 911 agggtgcctttgcattttgtgcca 888



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 254 ccaaaatgacttcactgatcaggagata 281
           |||||||||||||| |||||||||||||
Sbjct: 715 ccaaaatgacttcattgatcaggagata 688



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 4   taaacaacttttgatggacaa 24
           |||||||||||||||||||||
Sbjct: 960 taaacaacttttgatggacaa 940

---

>ref|XM_468970.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 707

 Score =  117 bits (59), Expect = 4e-23
 Identities = 92/103 (89%)
 Strand = Plus / Minus

                                                                       
Query: 388 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 447
           |||||||||||||||  |||||||||||||||||||| ||||| || |||||||| || |
Sbjct: 702 tcttgcatttctccactgcccttggtgcaaggccaatggcttcagaccctttcatgattc 643

                                                      
Query: 448 gaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           | ||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 642 ggaggcgtttgcacgactcgacgaacatctcccacgggacgtc 600

---

>emb|AJ306829.1|PTR306829 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA6
            gene)
          Length = 1206

 Score =  107 bits (54), Expect = 3e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                        
Query: 388  tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatcc 447
            |||||||||||||||| || ||||||||||| |||| |||||| |||||||||||||| |
Sbjct: 1027 tcttgcatttctccattgctcttggtgcaagtccaacagcttcagatcctttcattatgc 968

                                              
Query: 448  gaaggcgcttgcatgactcaacgaacatctccca 481
            |  ||||||||||||| ||||| |||||||||||
Sbjct: 967  gcgggcgcttgcatgaatcaacaaacatctccca 934

---

>emb|AJ843999.1| Plantago major mRNA for auxin resistance protein (axr2 gene)
          Length = 1195

 Score =  103 bits (52), Expect = 5e-19
 Identities = 97/112 (86%)
 Strand = Plus / Minus

                                                                       
Query: 379 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctt 438
           |||| ||| |||||||||||||||| ||||| |||||||| ||||| || || | |||||
Sbjct: 835 agcttctgctcttgcatttctccatggccctgggtgcaagtccaatggcctcagttcctt 776

                                                               
Query: 439 tcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           ||||||| || ||||||||||||||  |||| ||||||||||| ||||||||
Sbjct: 775 tcattatgcgcaggcgcttgcatgatccaacaaacatctcccatgggacgtc 724

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                            
Query: 415      caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 474
                ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 25345133 caaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgattcaacaaaca 25345192

                  
Query: 475      tc 476
                ||
Sbjct: 25345193 tc 25345194



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 376      ctcagctcctgttcttgcatttctccatcgcccttggtgc 415
                ||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 25344953 ctcagcttctgttcttgcatttctccattgccctcggtgc 25344992



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 38/43 (88%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                           
Query: 172      acatgttcttggcttcttctttcttatgtatataacaagatga 214
                ||||||||||||||||||   |||||||||||  |||||||||
Sbjct: 25344701 acatgttcttggcttctt---tcttatgtataagacaagatga 25344740



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 42       agggtgcctttgcattttgtgcca 65
                ||||||||||| ||||||||||||
Sbjct: 25344597 agggtgcctttacattttgtgcca 25344620

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                            
Query: 415      caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 474
                ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 25273309 caaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgattcaacaaaca 25273368

                  
Query: 475      tc 476
                ||
Sbjct: 25273369 tc 25273370



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 376      ctcagctcctgttcttgcatttctccatcgcccttggtgc 415
                ||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 25273129 ctcagcttctgttcttgcatttctccattgccctcggtgc 25273168



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 38/43 (88%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                           
Query: 172      acatgttcttggcttcttctttcttatgtatataacaagatga 214
                ||||||||||||||||||   |||||||||||  |||||||||
Sbjct: 25272877 acatgttcttggcttctt---tcttatgtataagacaagatga 25272916



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 42       agggtgcctttgcattttgtgcca 65
                ||||||||||| ||||||||||||
Sbjct: 25272773 agggtgcctttacattttgtgcca 25272796

---

>emb|AL837528.5|CNS08CAR Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152914

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 59/62 (95%)
 Strand = Plus / Plus

                                                                         
Query: 415   caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 474
             ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 11943 caaggccaatagcttctgatcctttcattatcctaaggcgcttgcatgattcaacaaaca 12002

               
Query: 475   tc 476
             ||
Sbjct: 12003 tc 12004



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 376   ctcagctcctgttcttgcatttctccatcgcccttggtgc 415
             ||||||| |||||||||||||||||||| ||||| |||||
Sbjct: 11763 ctcagcttctgttcttgcatttctccattgccctcggtgc 11802



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 38/43 (88%), Gaps = 3/43 (6%)
 Strand = Plus / Plus

                                                        
Query: 172   acatgttcttggcttcttctttcttatgtatataacaagatga 214
             ||||||||||||||||||   |||||||||||  |||||||||
Sbjct: 11511 acatgttcttggcttctt---tcttatgtataagacaagatga 11550



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 42    agggtgcctttgcattttgtgcca 65
             ||||||||||| ||||||||||||
Sbjct: 11407 agggtgcctttacattttgtgcca 11430

---

>gb|AF123509.1|AF123509 Nicotiana tabacum Nt-iaa4.1 deduced protein mRNA, complete cds
          Length = 884

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 91/105 (86%)
 Strand = Plus / Minus

                                                                       
Query: 377 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 436
           |||||| |||||||||||||||||||  || |||||||| || ||||| || ||||||||
Sbjct: 741 tcagcttctgttcttgcatttctccactgctcttggtgctagtccaattgcctctgatcc 682

                                                        
Query: 437 tttcattatccgaaggcgcttgcatgactcaacgaacatctccca 481
           |||||||||||  | ||| |||||||| ||||| |||||||||||
Sbjct: 681 tttcattatccttaagcgtttgcatgaatcaacaaacatctccca 637

---

>gb|AF123508.1|AF123508 Nicotiana tabacum Nt-iaa28 deduced protein mRNA, complete cds
          Length = 943

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 90/105 (85%)
 Strand = Plus / Minus

                                                                       
Query: 377 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 436
           |||||| |||||||||||||||||||  || |||||||| || ||||| || || |||||
Sbjct: 783 tcagcttctgttcttgcatttctccactgctcttggtgctagtccaatggcctcagatcc 724

                                                        
Query: 437 tttcattatccgaaggcgcttgcatgactcaacgaacatctccca 481
           |||||||||||  | ||| |||||||| ||||| |||||||||||
Sbjct: 723 tttcattatccttaagcgtttgcatgaatcaacaaacatctccca 679

---

>dbj|AB029148.1| Cucumis sativus mRNA expressed in cucumber hypocotyls, complete cds
          Length = 1187

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 93/109 (85%)
 Strand = Plus / Minus

                                                                       
Query: 376 ctcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatc 435
           ||||||| || ||||||||||||||||| |||||||||||||| ||||| || |||  ||
Sbjct: 825 ctcagcttctattcttgcatttctccatagcccttggtgcaagtccaatggcctcttttc 766

                                                            
Query: 436 ctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgg 484
           ||||||| || || || || ||||| || ||||| ||||||||||||||
Sbjct: 765 ctttcatgatacgtagacgtttgcaagattcaacaaacatctcccacgg 717

---

>ref|NM_111345.2| Arabidopsis thaliana IAA16; transcription factor AT3G04730 (IAA16)
           mRNA, complete cds
          Length = 1279

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 891 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 832

                                                          
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           || || |  || |||||||| ||||| |||||||||||||| |||||
Sbjct: 831 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtc 785

---

>gb|BT000857.1| Arabidopsis thaliana At3g04730/F7O18_22 mRNA, complete cds
          Length = 711

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 704 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 645

                                                          
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           || || |  || |||||||| ||||| |||||||||||||| |||||
Sbjct: 644 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtc 598

---

>gb|AF375420.1| Arabidopsis thaliana AT3g04730/F7O18_22 mRNA, complete cds
          Length = 1261

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 887 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 828

                                                          
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           || || |  || |||||||| ||||| |||||||||||||| |||||
Sbjct: 827 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtc 781

---

>dbj|AK221957.1| Arabidopsis thaliana mRNA for auxin-induced protein, complete cds,
           clone: RAFL22-51-M14
          Length = 519

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 244 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 185

                                                          
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           || || |  || |||||||| ||||| |||||||||||||| |||||
Sbjct: 184 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtc 138

---

>gb|AF332400.1| Arabidopsis thaliana clone C00021 (e) auxin-induced protein IAA16
           (At3g04730) mRNA, complete cds
          Length = 711

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 704 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 645

                                                          
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           || || |  || |||||||| ||||| |||||||||||||| |||||
Sbjct: 644 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtc 598

---

>emb|BX823949.1|CNS0A6JG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS9ZF01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1096

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 846 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 787

                                                          
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           || || |  || |||||||| ||||| |||||||||||||| |||||
Sbjct: 786 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtc 740

---

>emb|BX824584.1|CNS0A4VR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH58ZC08 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1234

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 875 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 816

                                                          
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           || || |  || |||||||| ||||| |||||||||||||| |||||
Sbjct: 815 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtc 769

---

>gb|AY087195.1| Arabidopsis thaliana clone 32727 mRNA, complete sequence
          Length = 1140

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 891 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 832

                                                          
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           || || |  || |||||||| ||||| |||||||||||||| |||||
Sbjct: 831 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtc 785

---

>gb|U49072.1|ATU49072 Arabidopsis thaliana early auxin-induced (IAA16) mRNA, complete cds
          Length = 1169

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| || || |  |||||||| ||||| || || ||||||||||| ||||||
Sbjct: 870 ctgttcttgcacttttctaatgcccttggagcaagtccgattgcttctgatcccttcatt 811

                                                          
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           || || |  || |||||||| ||||| |||||||||||||| |||||
Sbjct: 810 attcgtatacgtttgcatgaatcaacaaacatctcccacggtacgtc 764

---

>dbj|AP006633.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT12L11, TM0071,
             complete sequence
          Length = 69786

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 415   caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 474
             |||| ||||| |||||||||||||||||||| || ||||| ||||||||| |||| ||||
Sbjct: 23388 caagaccaattgcttctgatcctttcattattcgcaggcgtttgcatgacccaacaaaca 23329

               
Query: 475   tc 476
             ||
Sbjct: 23328 tc 23327



 Score = 48.1 bits (24), Expect = 0.027
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                     
Query: 376   ctcagctcctgttcttgcatttctccatcgcccttggtgc 415
             ||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 23559 ctcagcttctgtttttgcatttctccatggctcttggtgc 23520

---

>ref|NM_117535.4| Arabidopsis thaliana IAA14 (SOLITARY ROOT); transcription factor
           AT4G14550 (IAA14) mRNA, complete cds
          Length = 1482

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||| | |||||||| || ||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 776 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 717

                                            
Query: 444 atccgaaggcgcttgcatgactcaacgaacatc 476
           || || |  || ||||||||||| || ||||||
Sbjct: 716 atgcgcaaacgtttgcatgactcgacaaacatc 684

---

>gb|AF334718.1| Arabidopsis thaliana IAA14 (At4g14550) mRNA, complete cds
          Length = 687

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||| | |||||||| || ||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 680 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 621

                                            
Query: 444 atccgaaggcgcttgcatgactcaacgaacatc 476
           || || |  || ||||||||||| || ||||||
Sbjct: 620 atgcgcaaacgtttgcatgactcgacaaacatc 588

---

>gb|U18416.1|ATU18416 Arabidopsis thaliana IAA14 (IAA14) gene, partial cds
          Length = 732

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||| | |||||||| || ||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 488 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 429

                                            
Query: 444 atccgaaggcgcttgcatgactcaacgaacatc 476
           || || |  || ||||||||||| || ||||||
Sbjct: 428 atgcgcaaacgtttgcatgactcgacaaacatc 396

---

>ref|XM_469684.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 811

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 91/111 (81%)
 Strand = Plus / Minus

                                                                       
Query: 377 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 436
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 811 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 752

                                                              
Query: 437 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggac 487
            ||||| ||||  | ||| ||||||||||| || ||||||| |||||||||
Sbjct: 751 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggac 701

---

>emb|AJ251791.1|OSA251791 Oryza sativa partial mRNA for putative IAA1 protein (iaa1 gene)
          Length = 1068

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 91/111 (81%)
 Strand = Plus / Minus

                                                                       
Query: 377 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 436
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 863 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 804

                                                              
Query: 437 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggac 487
            ||||| ||||  | ||| ||||||||||| || ||||||| |||||||||
Sbjct: 803 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggac 753

---

>dbj|AK100790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121A20, full
           insert sequence
          Length = 1092

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 91/111 (81%)
 Strand = Plus / Minus

                                                                       
Query: 377 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 436
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 873 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 814

                                                              
Query: 437 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggac 487
            ||||| ||||  | ||| ||||||||||| || ||||||| |||||||||
Sbjct: 813 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggac 763

---

>dbj|AK062852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-A04, full
           insert sequence
          Length = 430

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 91/111 (81%)
 Strand = Plus / Minus

                                                                       
Query: 377 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 436
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 136 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 77

                                                              
Query: 437 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggac 487
            ||||| ||||  | ||| ||||||||||| || ||||||| |||||||||
Sbjct: 76  cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggac 26

---

>dbj|AK059838.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C11, full
           insert sequence
          Length = 1180

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 91/111 (81%)
 Strand = Plus / Minus

                                                                       
Query: 377 tcagctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcc 436
           ||||||| |||||||| | || ||| | || ||||||||||| ||||| ||||| || ||
Sbjct: 868 tcagctcttgttcttgtacttgtcctttgctcttggtgcaagaccaatggcttcggaacc 809

                                                              
Query: 437 tttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggac 487
            ||||| ||||  | ||| ||||||||||| || ||||||| |||||||||
Sbjct: 808 cttcatgatcctcaagcgtttgcatgactcgacaaacatctgccacgggac 758

---

>gb|AY137961.1| Mirabilis jalapa clone SM-36 Aux/IAA1 mRNA, partial cds
          Length = 291

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 81/98 (82%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| |||||||| || ||||| ||||| |||  ||| |||  ||||||||| 
Sbjct: 287 ctgttcttgcacttctccatggctcttggagcaagtccagcagcctcttttcctttcatg 228

                                                 
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctccca 481
           || ||||| |  ||||||||||| || |||||||||||
Sbjct: 227 atgcgaagccttttgcatgactccacaaacatctccca 190

---

>gb|AY129669.1| Mirabilis jalapa auxin-responsive protein IAA1 mRNA, partial cds
          Length = 990

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 81/98 (82%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| |||||||| || ||||| ||||| |||  ||| |||  ||||||||| 
Sbjct: 578 ctgttcttgcacttctccatggctcttggagcaagtccagcagcctcttttcctttcatg 519

                                                 
Query: 444 atccgaaggcgcttgcatgactcaacgaacatctccca 481
           || ||||| |  ||||||||||| || |||||||||||
Sbjct: 518 atgcgaagccttttgcatgactccacaaacatctccca 481

---

>emb|BX827786.1|CNS0A3TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH21ZC02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1476

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||| | |||||||| || ||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 769 ctgttcttgaacttctccattgctcttggagcaagtccaattgcttcggatcctttcatt 710

             
Query: 444 at 445
           ||
Sbjct: 709 at 708

---

>gb|DQ442404.1| Striga asiatica clone StIAA-2 auxin-regulated protein mRNA,
           complete cds
          Length = 1126

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 74/89 (83%)
 Strand = Plus / Minus

                                                                       
Query: 393 catttctccatcgcccttggtgcaaggccaatagcttctgatcctttcattatccgaagg 452
           ||||||||||| || |  |||||||| ||  | ||||||| ||||||||| || ||||||
Sbjct: 731 catttctccatggctcgaggtgcaagtccctttgcttctgttcctttcataatacgaagg 672

                                        
Query: 453 cgcttgcatgactcaacgaacatctccca 481
           ||||| ||||| ||||| |||||| ||||
Sbjct: 671 cgcttacatgattcaacaaacatccccca 643

---

>gb|AY137963.1| Mirabilis jalapa clone RS-74 Aux/IAA3 mRNA, partial cds
          Length = 301

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 58/68 (85%)
 Strand = Plus / Minus

                                                                       
Query: 423 atagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaacatctcccac 482
           |||||||||||||| |||||||| ||||| || ||||| || |  |||||||||||||| 
Sbjct: 101 atagcttctgatcccttcattatacgaagacgtttgcacgagttcacgaacatctcccaa 42

                   
Query: 483 gggacgtc 490
           || |||||
Sbjct: 41  ggaacgtc 34

---

>emb|AJ575098.1|TAE575098 Triticum aestivum partial mRNA for IAA1 protein
          Length = 1104

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 91/112 (81%)
 Strand = Plus / Minus

                                                                       
Query: 379 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctt 438
           ||||| |||||||| | || ||| | |||||||||||||| || || ||||| || || |
Sbjct: 776 agctcttgttcttgtacttgtccttggcccttggtgcaagaccgatggcttcggacccct 717

                                                               
Query: 439 tcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggacgtc 490
           |||| ||||  | ||| ||||||||  |||| ||||||||||| ||||||||
Sbjct: 716 tcatgatcctcaagcgtttgcatgaagcaacaaacatctcccatgggacgtc 665

---

>emb|AJ306825.1|PTR306825 Populus tremula x Populus tremuloides mRNA for aux/IAA protein (IAA2
            gene)
          Length = 1763

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 382  tcctgttcttgcatttctccatcgcccttggtgcaaggccaat 424
            ||||||| |||||||||||||| |||||||| || ||||||||
Sbjct: 1280 tcctgtttttgcatttctccatggcccttggggctaggccaat 1238

---

>emb|AJ306830.1|PTR306830 Populus tremula x Populus tremuloides mRNA for aux/IAA protein
           (IAA7 gene)
          Length = 1178

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 47/54 (87%)
 Strand = Plus / Minus

                                                                 
Query: 434 tcctttcattatccgaaggcgcttgcatgactcaacgaacatctcccacgggac 487
           |||||||||||| || || ||||||||||| ||||| ||||| ||||| |||||
Sbjct: 705 tcctttcattattcgcagccgcttgcatgattcaacaaacatgtcccatgggac 652

---

>gb|DQ191056.1| Glycine max clone DD8.1 SP-6 mRNA, complete cds
          Length = 402

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 379 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaa 423
           |||||||||||||||||||  |||| || ||||||||||| ||||
Sbjct: 310 agctcctgttcttgcattttgccatggctcttggtgcaagaccaa 266

---

>gb|DQ191055.1| Glycine max clone DD7.2 SP-5 mRNA, complete cds
          Length = 478

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 379 agctcctgttcttgcatttctccatcgcccttggtgcaaggccaa 423
           |||||||||||||||||||  |||| || ||||||||||| ||||
Sbjct: 391 agctcctgttcttgcattttgccatggctcttggtgcaagaccaa 347

---

>gb|J03919.1|SOYAUX28 Soybean auxin-regulated protein (Aux28) mRNA, complete cds
          Length = 1784

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                         
Query: 379  agctcctgttcttgcatttctccatcgcccttggtgcaaggccaa 423
            |||||||||||||||||||  |||| || ||||||||||| ||||
Sbjct: 1241 agctcctgttcttgcattttgccatggctcttggtgcaagaccaa 1197

---

>gb|AF373100.1| Populus tremula x Populus tremuloides auxin-regulated protein
           (IAA1) mRNA, complete cds
          Length = 1313

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 384 ctgttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcatt 443
           ||||||||||| |||||||  || ||||| || || ||||| || || || |||||||| 
Sbjct: 875 ctgttcttgcacttctccacagctcttggggcgagtccaatggcctcagaccctttcatg 816

                                           
Query: 444 atccgaaggcgcttgcatgactcaacgaacat 475
           ||||  | |||||||||||| ||||| |||||
Sbjct: 815 atcctcaagcgcttgcatgaatcaacaaacat 784

---

>ref|NM_100306.2| Arabidopsis thaliana AXR3 (AUXIN RESISTANT 3); transcription factor
           AT1G04250 (AXR3) mRNA, complete cds
          Length = 1057

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 388 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 442
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 803 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 749

---

>gb|AC115751.6| Mus musculus chromosome 1, clone RP23-16I21, complete sequence
          Length = 256998

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 111    agaacaagcagagcaaaaagaaa 133
              |||||||||||||||||||||||
Sbjct: 171203 agaacaagcagagcaaaaagaaa 171181

---

>gb|AC138640.7| Mus musculus chromosome 1, clone RP23-463G19, complete sequence
          Length = 167384

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 111  agaacaagcagagcaaaaagaaa 133
            |||||||||||||||||||||||
Sbjct: 4245 agaacaagcagagcaaaaagaaa 4223

---

>gb|AF336916.1| Arabidopsis thaliana auxin-induced protein, IAA17/AXR3-1
           (At1g04250) mRNA, complete cds
          Length = 690

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 388 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 442
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 679 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 625

---

>gb|AY117183.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250)
           mRNA, complete cds
          Length = 721

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 388 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 442
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 679 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 625

---

>gb|AY070094.1| Arabidopsis thaliana auxin-induced protein IAA17/AXR3-1 (At1g04250)
           mRNA, complete cds
          Length = 1033

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 388 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 442
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 761 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 707

---

>emb|BX248505.8| Zebrafish DNA sequence from clone CH211-87L2 in linkage group 14,
             complete sequence
          Length = 189425

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 340   attttgattcttgcataacattt 362
             |||||||||||||||||||||||
Sbjct: 13185 attttgattcttgcataacattt 13163

---

>dbj|AK221076.1| Arabidopsis thaliana mRNA for putative auxin-induced protein,
           IAA17/AXR3-1, complete cds, clone: RAFL22-79-F09
          Length = 452

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 388 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 442
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 206 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 152

---

>gb|AY087284.1| Arabidopsis thaliana clone 33613 mRNA, complete sequence
          Length = 1021

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 388 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 442
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 803 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 749

---

>gb|U49073.1|ATU49073 Arabidopsis thaliana early auxin-induced (IAA17) mRNA, complete cds
          Length = 971

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 388 tcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 442
           ||||||| |||||||||||||| || || || ||||| || || |||||||||||
Sbjct: 740 tcttgcacttctccatcgccctcggagcgagaccaatggcatccgatcctttcat 686

---

>emb|Z97336.1|ATFCA1 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 1
          Length = 206606

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                          
Query: 415    caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 474
              |||| ||||| ||||| |||||||||||||| || |  || ||||||||||| || ||||
Sbjct: 106636 caagtccaattgcttcggatcctttcattatgcgcaaacgtttgcatgactcgacaaaca 106695

                
Query: 475    tc 476
              ||
Sbjct: 106696 tc 106697

---

>emb|AL161539.2|ATCHRIV39 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 39
          Length = 197976

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 415   caaggccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaaca 474
             |||| ||||| ||||| |||||||||||||| || |  || ||||||||||| || ||||
Sbjct: 52132 caagtccaattgcttcggatcctttcattatgcgcaaacgtttgcatgactcgacaaaca 52191

               
Query: 475   tc 476
             ||
Sbjct: 52192 tc 52193

---

>gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, complete sequence
          Length = 191923

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 116   aagcagagcaaaaagaaaagacacaa 141
             |||||||| |||||||||||||||||
Sbjct: 85548 aagcagagaaaaaagaaaagacacaa 85573

---

>gb|AF123504.1|AF123504 Nicotiana tabacum Nt-iaa2.3 deduced protein mRNA, complete cds
          Length = 756

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 426 gcttctgatcctttcattatcc 447
           ||||||||||||||||||||||
Sbjct: 564 gcttctgatcctttcattatcc 543

---

>ref|NM_123385.2| Arabidopsis thaliana unknown protein AT5G40210 mRNA, complete cds
          Length = 1154

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 176 gttcttggcttcttctttctt 196
           |||||||||||||||||||||
Sbjct: 23  gttcttggcttcttctttctt 3

---

>ref|XM_513609.1| PREDICTED: Pan troglodytes similar to syntaxin 4 binding protein
            UNC-18c (LOC457078), mRNA
          Length = 4194

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 111  agaacaagcagagcaaaaaga 131
            |||||||||||||||||||||
Sbjct: 2549 agaacaagcagagcaaaaaga 2569

---

>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 124     caaaaagaaaagacacaatta 144
               |||||||||||||||||||||
Sbjct: 1125044 caaaaagaaaagacacaatta 1125064

---

>gb|AC091781.20| Trypanosoma brucei chromosome 4 clone RPCI93-30K5, complete sequence
          Length = 144951

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 124   caaaaagaaaagacacaatta 144
             |||||||||||||||||||||
Sbjct: 93845 caaaaagaaaagacacaatta 93865

---

>gb|AC159410.1| Trypanosoma brucei chromosome 4 clone RPCI93-1D20, complete sequence
          Length = 154694

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 124   caaaaagaaaagacacaatta 144
             |||||||||||||||||||||
Sbjct: 40947 caaaaagaaaagacacaatta 40927

---

>ref|NM_001033838.1| Ciona intestinalis LIM and SH3 protein (lasp), mRNA
          Length = 711

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 379 agctcctgttcttgcatttct 399
           |||||||||||||||||||||
Sbjct: 672 agctcctgttcttgcatttct 652

---

>gb|AC125781.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0058G18, complete sequence
          Length = 175397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 172    acatgttcttggcttcttctt 192
              |||||||||||||||||||||
Sbjct: 105892 acatgttcttggcttcttctt 105912

---

>gb|AC137751.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0014E11, complete sequence
          Length = 199348

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   acatgttcttggcttcttctt 192
             |||||||||||||||||||||
Sbjct: 46906 acatgttcttggcttcttctt 46926

---

>gb|AC138767.7| Mus musculus chromosome 12, clone RP23-454K24, complete sequence
          Length = 192692

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 291    acttaggacagagaatatgatacag 315
              |||||||||| ||||||||||||||
Sbjct: 167403 acttaggacatagaatatgatacag 167379

---

>gb|DQ442403.1| Striga asiatica clone StIAA-1 auxin-regulated protein mRNA,
           complete cds
          Length = 1228

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 386 gttcttgcatttctccatcgcccttggtgcaaggccaatagcttctgatcctttcat 442
           ||||||| |||||||||  ||||| || || || |||||||| || |||||||||||
Sbjct: 909 gttcttggatttctccacagccctgggagctagtccaatagcatcggatcctttcat 853

---

>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence
          Length = 198687

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 382    tcctgttcttgcatttctcca 402
              |||||||||||||||||||||
Sbjct: 191268 tcctgttcttgcatttctcca 191288

---

>gb|AC091879.2| Homo sapiens chromosome 5 clone CTD-3136G21, complete sequence
          Length = 170712

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 382    tcctgttcttgcatttctcca 402
              |||||||||||||||||||||
Sbjct: 168732 tcctgttcttgcatttctcca 168712

---

>gb|AF412089.1|AF412089 Arabidopsis thaliana AT5g40210/MSN9_110 mRNA, complete cds
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 176 gttcttggcttcttctttctt 196
           |||||||||||||||||||||
Sbjct: 23  gttcttggcttcttctttctt 3

---

>gb|AC157515.2| Mus musculus BAC clone RP24-226N22 from chromosome 12, complete
             sequence
          Length = 143190

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 291   acttaggacagagaatatgatacag 315
             |||||||||| ||||||||||||||
Sbjct: 32744 acttaggacatagaatatgatacag 32720

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 172      acatgttcttggcttcttctt 192
                |||||||||||||||||||||
Sbjct: 24917778 acatgttcttggcttcttctt 24917798

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 169     ctcacatgttcttggcttctt 189
               |||||||||||||||||||||
Sbjct: 3804899 ctcacatgttcttggcttctt 3804879

---

>gb|AY082522.1| Vitis vinifera Aux/IAA protein mRNA, complete cds
          Length = 1481

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 382  tcctgttcttgcatttctcca 402
            |||||||||||||||||||||
Sbjct: 1075 tcctgttcttgcatttctcca 1055

---

>dbj|AB182287.1| Ciona intestinalis mRNA for lasp, complete cds
          Length = 711

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 379 agctcctgttcttgcatttct 399
           |||||||||||||||||||||
Sbjct: 672 agctcctgttcttgcatttct 652

---

>gb|AC068121.8| Homo sapiens BAC clone RP11-181P21 from 2, complete sequence
          Length = 170846

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 191    tttcttatgtatataacaaga 211
              |||||||||||||||||||||
Sbjct: 119933 tttcttatgtatataacaaga 119953

---

>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1449_C01
          Length = 192857

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   ctcacatgttcttggcttctt 189
             |||||||||||||||||||||
Sbjct: 70116 ctcacatgttcttggcttctt 70096

---

>emb|AL672124.13| Mouse DNA sequence from clone RP23-392H8 on chromosome X, complete
              sequence
          Length = 197404

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 224    ctgactgactggaaaagagaa 244
              |||||||||||||||||||||
Sbjct: 146717 ctgactgactggaaaagagaa 146697

---

>dbj|AB010699.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSN9
          Length = 61001

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   gttcttggcttcttctttctt 196
             |||||||||||||||||||||
Sbjct: 28698 gttcttggcttcttctttctt 28718

---

>emb|X68217.1|PSIAA6R P.sativum mRNA for auxin-induced protein (clone pIAA6)
          Length = 702

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 455 cttgcatgactcaacgaacatctcccacgggac 487
           ||||||||||||||  ||||||||||| |||||
Sbjct: 394 cttgcatgactcaataaacatctcccaagggac 362

---

>gb|AC105989.14| Mus musculus chromosome 8, clone RP24-95N3, complete sequence
          Length = 194387

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 115    caagcagagcaaaaagaaaagacacaatt 143
              ||||||||||| |||||||||||| ||||
Sbjct: 108849 caagcagagcagaaagaaaagacagaatt 108821

---

>emb|AL929326.9| Zebrafish DNA sequence from clone BUSM1-SL11 in linkage group 20,
             complete sequence
          Length = 137700

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 185   ttcttctttcttatgtatata 205
             |||||||||||||||||||||
Sbjct: 18952 ttcttctttcttatgtatata 18932

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 172      acatgttcttggcttcttctt 192
                |||||||||||||||||||||
Sbjct: 25229448 acatgttcttggcttcttctt 25229468

---

>gb|AC145780.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
            OSJNBb0069P02 map near S13580, complete sequence
          Length = 88044

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 388  tcttgcatttctccatcgcccttggtgc 415
            |||||||||||||||  |||||||||||
Sbjct: 6366 tcttgcatttctccactgcccttggtgc 6339

---

>gb|AC103379.8| Mus musculus chromosome 13, clone RP24-245I24, complete sequence
          Length = 170688

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   aaagagaagatcacaaccca 256
             ||||||||||||||||||||
Sbjct: 31708 aaagagaagatcacaaccca 31727

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 388      tcttgcatttctccatcgcccttggtgc 415
                |||||||||||||||  |||||||||||
Sbjct: 24085090 tcttgcatttctccactgcccttggtgc 24085117

---

>gb|AC132284.5| Mus musculus BAC clone RP24-351O18 from chromosome 5, complete sequence
          Length = 174681

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    agcaaaaagaaaagacacaa 141
              ||||||||||||||||||||
Sbjct: 160747 agcaaaaagaaaagacacaa 160728

---

>gb|AC145379.2| Oryza sativa chromosome 3 BAC OSJNBa0010N03 genomic sequence, complete
              sequence
          Length = 140980

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 388    tcttgcatttctccatcgcccttggtgc 415
              |||||||||||||||  |||||||||||
Sbjct: 137466 tcttgcatttctccactgcccttggtgc 137439

---

>emb|CT025566.7| Mouse DNA sequence from clone RP24-151A22 on chromosome 13, complete
             sequence
          Length = 149381

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   aaagagaagatcacaaccca 256
             ||||||||||||||||||||
Sbjct: 87508 aaagagaagatcacaaccca 87527

---

>gb|AC121947.2| Mus musculus BAC clone RP24-213L3 from 13, complete sequence
          Length = 154202

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   gagcaaaaagaaaagacaca 140
             ||||||||||||||||||||
Sbjct: 98541 gagcaaaaagaaaagacaca 98522

---

>ref|XM_652254.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (2.t00121)
           partial mRNA
          Length = 2247

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 caatagcttctgatcctttc 440
           ||||||||||||||||||||
Sbjct: 670 caatagcttctgatcctttc 651

---

>gb|AY337616.1| Gossypium barbadense Gbiaa-Re (iaa-re) mRNA, complete cds
          Length = 1043

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 424 tagcttctgatcctttcattatcc 447
           ||||||||||||||||||| ||||
Sbjct: 610 tagcttctgatcctttcatgatcc 587

---

>emb|AL513493.11| Human DNA sequence from clone RP11-433N2 on chromosome 1 Contains the
             5' end of the PDE4B gene for phosphodiesterase 4B,
             cAMP-specific (phosphodiesterase E4 dunce homolog,
             Drosophila), complete sequence
          Length = 165780

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   tcctgttcttgcatttctcc 401
             ||||||||||||||||||||
Sbjct: 20832 tcctgttcttgcatttctcc 20851

---

>emb|AL391994.28| Human DNA sequence from clone RP11-382D8 on chromosome 1 Contains the
             5' end of the ARID4B gene for AT rich interactive domain
             4B (RBP1- like), a ribosomal protein L23a (RPL23A)
             pseudogene, ubiquitin-conjugating enzyme E2G 1 (UBC7
             homolog, C. elegans) (UBE2G10 pseudogene, the GGPS1 gene
             for geranylgeranyl diphosphate synthase 1 and two CpG
             islands, complete sequence
          Length = 142273

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   aagcagagcaaaaagaaaag 135
             ||||||||||||||||||||
Sbjct: 48435 aagcagagcaaaaagaaaag 48416

---

>emb|AL450346.4| Human DNA sequence from clone RP11-184C23 on chromosome 6 Contains the
              gene for a novel protein similar to FK506-binding protein
              (FKBP-12) (Peptidyl-prolyl cis-trans isomerase)(PPiase)
              (Rotamase), a pseudogene similar to part of serine
              palmitoyltransferase long chain base subunit 1(SPTLC1) and
              a novel pseudogene, complete sequence
          Length = 168467

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 125    aaaaagaaaagacacaattatgtg 148
              ||||||||||||||||| ||||||
Sbjct: 108420 aaaaagaaaagacacaaatatgtg 108443

---

>emb|AL357712.10| Human DNA sequence from clone GS1-756B1 on chromosome 10 Contains a
             novel pseudogene (FLJ34719 FLJ14936) and the 3' end of a
             novel gene, complete sequence
          Length = 110645

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   cttagacttaggacagagaa 305
             ||||||||||||||||||||
Sbjct: 88043 cttagacttaggacagagaa 88062

---

>emb|AL133380.5| Human DNA sequence from clone RP5-862P8 on chromosome 1q42.2-43
             Contains a ribosomal protein S7 (RPS7) pseudogene, pecanex
             homolog (Drosophila) (PCNX) pseudogene and the gene for
             mixed lineage kinase 4 (KIAA1804), complete sequence
          Length = 118632

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   actgactggaaaagagaaga 246
             ||||||||||||||||||||
Sbjct: 12735 actgactggaaaagagaaga 12716

---

>emb|AL049541.24|HSJ991B18 Human DNA sequence from clone RP5-991B18 on chromosome
           20q13.11-13.3 Contains a putative novel gene, ESTs, STSs
           and GSSs, complete sequence
          Length = 129874

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 299 cagagaatatgatacaggga 318
           ||||||||||||||||||||
Sbjct: 576 cagagaatatgatacaggga 557

---

>gb|AY962829.1| Prunus armeniaca auxin-induced protein mRNA, partial cds
          Length = 364

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 455 cttgcatgactcaacgaacatctcccacgggacgtc 490
           |||||||||||||   ||||||||||| ||||||||
Sbjct: 162 cttgcatgactcagtaaacatctcccaagggacgtc 127

---

>gb|AC105024.8| Homo sapiens chromosome 17, clone CTD-2132N18, complete sequence
          Length = 147662

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 108   ggaagaacaagcagagcaaa 127
             ||||||||||||||||||||
Sbjct: 22838 ggaagaacaagcagagcaaa 22857

---

>emb|CR926468.3| Mouse DNA sequence from clone RP24-191A5 on chromosome 4, complete
            sequence
          Length = 129452

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 110  aagaacaagcagagcaaaaagaaa 133
            |||||||||||| |||||||||||
Sbjct: 5755 aagaacaagcagggcaaaaagaaa 5732

---

>emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in linkage group 14,
             complete sequence
          Length = 161300

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 125   aaaaagaaaagacacaattatgtggcagacag 156
             |||||||||||||| | || ||||||||||||
Sbjct: 57982 aaaaagaaaagacaaatttttgtggcagacag 58013

---

>gb|AC010760.8| Homo sapiens chromosome , clone RP11-2F9, complete sequence
          Length = 179139

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tcctgttcttgcatttctcc 401
             ||||||||||||||||||||
Sbjct: 91797 tcctgttcttgcatttctcc 91778

---

>gb|AC100733.16| Mus musculus chromosome 15, clone RP24-312H21, complete sequence
          Length = 151696

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 110   aagaacaagcagagcaaaaagaaaagacacaa 141
             |||||||||||  |||||||||||| ||||||
Sbjct: 39295 aagaacaagcaaggcaaaaagaaaaaacacaa 39326

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 388      tcttgcatttctccatcgcccttggtgc 415
                |||||||||||||||  |||||||||||
Sbjct: 24002559 tcttgcatttctccactgcccttggtgc 24002586

---

>gb|AY254569.1| Gossypium barbadense auxin responsive protein IAA-Re (iaa-Re) mRNA,
           complete cds
          Length = 750

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 424 tagcttctgatcctttcattatcc 447
           ||||||||||||||||||| ||||
Sbjct: 317 tagcttctgatcctttcatgatcc 294

---

>gb|AC136355.7| Homo sapiens chromosome 15, clone RP11-54M9, complete sequence
          Length = 65183

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   tcctgttcttgcatttctcc 401
             ||||||||||||||||||||
Sbjct: 18021 tcctgttcttgcatttctcc 18040

---

>gb|AC135068.5| Homo sapiens chromosome 15, clone RP11-294C11, complete sequence
          Length = 178845

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   tcctgttcttgcatttctcc 401
             ||||||||||||||||||||
Sbjct: 82053 tcctgttcttgcatttctcc 82072

---

>gb|AC134981.6| Homo sapiens chromosome 15, clone RP11-361C13, complete sequence
          Length = 194789

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 382   tcctgttcttgcatttctcc 401
             ||||||||||||||||||||
Sbjct: 63054 tcctgttcttgcatttctcc 63073

---

>gb|AC134980.3| Homo sapiens chromosome 15, clone RP11-69H14, complete sequence
          Length = 151383

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tcctgttcttgcatttctcc 401
             ||||||||||||||||||||
Sbjct: 36192 tcctgttcttgcatttctcc 36173

---

>gb|AC171780.2| Homo sapiens chromosome 15, clone RP11-350K22, complete sequence
          Length = 192478

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tcctgttcttgcatttctcc 401
             ||||||||||||||||||||
Sbjct: 38659 tcctgttcttgcatttctcc 38640

---

>gb|AC117708.10| Mus musculus chromosome 7, clone RP23-474J16, complete sequence
          Length = 188333

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    aagcagagcaaaaagaaaag 135
              ||||||||||||||||||||
Sbjct: 142377 aagcagagcaaaaagaaaag 142396

---

>gb|AC171558.2| Homo sapiens chromosome 15, clone RP11-983G14, complete sequence
          Length = 201265

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tcctgttcttgcatttctcc 401
             ||||||||||||||||||||
Sbjct: 67139 tcctgttcttgcatttctcc 67120

---

>emb|AL512310.4|CNS07EF1 Human chromosome 14 DNA sequence BAC R-597A11 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185605

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 382  tcctgttcttgcatttctcc 401
            ||||||||||||||||||||
Sbjct: 6170 tcctgttcttgcatttctcc 6151

---

>dbj|AP006398.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT29J15, TM0280b,
            complete sequence
          Length = 68747

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 420  ccaatagcttctgatcctttcattatccgaaggcgcttgcatgactcaacgaacat 475
            ||||| ||||| || ||||||||||| || || |||||||| || || ||||||||
Sbjct: 4408 ccaattgcttcagaacctttcattatgcggagacgcttgcaagattctacgaacat 4463

---

>emb|AL732527.6| Mouse DNA sequence from clone RP23-259B18 on chromosome 4, complete
             sequence
          Length = 145837

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 110   aagaacaagcagagcaaaaagaaa 133
             |||||||||||| |||||||||||
Sbjct: 22479 aagaacaagcagggcaaaaagaaa 22502

---

>emb|AL928896.6| Mouse DNA sequence from clone RP23-42H18 on chromosome 2, complete
             sequence
          Length = 193932

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 47    gcctttgcattttgtgccaggaag 70
             ||||||||||||| ||||||||||
Sbjct: 26621 gcctttgcattttatgccaggaag 26598

---

>dbj|D86559.1| Glycyrrhiza glabra mRNA for polyketide reductase (GGPKR2), complete
           cds
          Length = 1197

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 323 caagcaaggttataggtattttga 346
           |||||||||||||||| |||||||
Sbjct: 192 caagcaaggttataggcattttga 215


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,860,805
Number of Sequences: 3902068
Number of extensions: 5860805
Number of successful extensions: 112357
Number of sequences better than 10.0: 117
Number of HSP's better than 10.0 without gapping: 117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111847
Number of HSP's gapped (non-prelim): 506
length of query: 492
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 470
effective length of database: 17,147,199,772
effective search space: 8059183892840
effective search space used: 8059183892840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---