>FIXK_BRAJA (P29286) Nitrogen fixation regulation protein fixK|
          Length = 237

 Score = 32.3 bits (72), Expect = 0.50
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
 Frame = -2

Query: 159 VVIRPTFHICLVCFVHSTAFCLCLSAAKKVE---LPRTVYFSV*KYMLSEQ 16
           V+I P  H C  C + ++A C  L AA+  E   L R V+FS  + + SE+
Sbjct: 6   VMIEPNGHFCSDCAIRTSAVCSSLDAAELREFEHLGRRVHFSSGETVFSEE 56

>YDZA_SCHPO (O13717) Hypothetical protein C14C4.10c in chromosome I|
          Length = 329

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
 Frame = -3

Query: 269 LRGVPAQC-VHRHVILEPATARACMAWQFDHLSACCFSW*FDRRSIFALYVSCTVLRFVY 93
           LRG+     V   + L P++AR C+ W   +         +D R I + +     LR   
Sbjct: 229 LRGITHSIFVDLFIFLSPSSARHCLCWSLPYFQH------YDLRFIASFFTQFYRLRLHQ 282

Query: 92  VYPQQRRWSCHVQYIFQCENICFP 21
           VYP+         ++F C N  +P
Sbjct: 283 VYPRG-------NWVFTCLNGYYP 299

>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein|
           At4g12040
          Length = 175

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +3

Query: 195 CHACTRGCRLENHMTVHALGGYSS*MNLPSCTIRQP--LHPL 314
           C  C R  R E   T  A     + + LPSC+I  P   HPL
Sbjct: 35  CSKCYRSLRAEEDQTAVAKAAVKNSLKLPSCSIIAPGQKHPL 76

>BC11A_HUMAN (Q9H165) B-cell lymphoma/leukemia 11A (B-cell CLL/lymphoma 11A)|
           (COUP-TF-interacting protein 1) (Ecotropic viral
           integration site 9 protein) (EVI-9)
          Length = 835

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +3

Query: 54  LYVAAPPSLLRIDINKTQYCARNIQGKYGTSVELPRKTTC*EV---VELPCHACTRGCRL 224
           L  A PPS   +     ++C +    K+ +++ + R++   E      L  HACT+  +L
Sbjct: 363 LQSAPPPSQPPVKSKSCEFCGKTF--KFQSNLVVHRRSHTGEKPYKCNLCDHACTQASKL 420

Query: 225 ENHMTVH 245
           + HM  H
Sbjct: 421 KRHMKTH 427

>BC11A_MOUSE (Q9QYE3) B-cell lymphoma/leukemia 11A (B-cell CLL/lymphoma 11A)|
           (COUP-TF-interacting protein 1) (Ecotropic viral
           integration site 9 protein) (EVI-9)
          Length = 773

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +3

Query: 54  LYVAAPPSLLRIDINKTQYCARNIQGKYGTSVELPRKTTC*EV---VELPCHACTRGCRL 224
           L  A PPS   +     ++C +    K+ +++ + R++   E      L  HACT+  +L
Sbjct: 363 LQSAPPPSQPPVKSKSCEFCGKTF--KFQSNLVVHRRSHTGEKPYKCNLCDHACTQASKL 420

Query: 225 ENHMTVH 245
           + HM  H
Sbjct: 421 KRHMKTH 427

>PARE_SALTY (P0A2I5) DNA topoisomerase 4 subunit B (EC 5.99.1.-) (Topoisomerase|
           IV subunit B)
          Length = 630

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 54  LYVAAPPSLLRIDINKTQYCARNIQGKYGTSVELPRK 164
           +YVA PP L RID+ K  Y A   + K G   +L RK
Sbjct: 519 VYVALPP-LYRIDLGKEVYYALTEEEKAGVLEQLKRK 554

>PARE_SALTI (P0A2I6) DNA topoisomerase 4 subunit B (EC 5.99.1.-) (Topoisomerase|
           IV subunit B)
          Length = 630

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = +3

Query: 54  LYVAAPPSLLRIDINKTQYCARNIQGKYGTSVELPRK 164
           +YVA PP L RID+ K  Y A   + K G   +L RK
Sbjct: 519 VYVALPP-LYRIDLGKEVYYALTEEEKAGVLEQLKRK 554

>CB010_HUMAN (Q7Z570) Protein C2orf10|
          Length = 1209

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 5/100 (5%)
 Frame = +1

Query: 22  GKHIFSH*KIYCTWQLHLLCCG*T*TKRSTVHETYKANME-----RRSNYHEKQHAERWS 186
           GKH  ++ + YC W+  +  C  +   RS V +     M      +R        +ER+ 
Sbjct: 712 GKHNLTYSRTYCCWKTKMSSC--SQDHRSLVLQNDMKRMSQNQAVKRGYNSVMNESERFY 769

Query: 187 NCHAMHARAVAGSRIT*RCTHWAGTPRR*TSPPARSGSPC 306
                H+ + +      R  H    P     PP+ S +PC
Sbjct: 770 RKRRQHSHSYSSDESLNRQNH---LPEEFLRPPSTSVAPC 806

>PLB2_YEAST (Q03674) Lysophospholipase 2 precursor (EC 3.1.1.5) (Phospholipase|
           B 2)
          Length = 706

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = -1

Query: 322 SSCRGCKGCRIVQEGRFIYEEYPPNACTVM*FSSRQPRVHAWHGSSTTSQHVVFRGNST 146
           S+  GC GC I++  +       P  CT   F+      + W+G+ +TS +    GNST
Sbjct: 548 SNFLGCIGCAIIRRKQESLNATLPPECTKC-FAD-----YCWNGTLSTSANPELSGNST 600

>DXS_CHRVO (Q7NUK5) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)|
           (1-deoxyxylulose-5-phosphate synthase) (DXP synthase)
           (DXPS)
          Length = 616

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +2

Query: 107 VLCTKHTRQIWNVGRITTKNNMLRGGRTAMPCMH-----ARLPARESHD 238
           V  T H R +W+VG  T  + +L G R  M  M      A  P RE  +
Sbjct: 60  VFDTPHDRLVWDVGHQTYPHKILTGRRERMHTMRQHNGLAGFPKREESE 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,581,141
Number of Sequences: 219361
Number of extensions: 994361
Number of successful extensions: 2777
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2777
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)