ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart25c11 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 181 bits (458), Expect = 5e-46 Identities = 79/87 (90%), Positives = 83/87 (95%) Frame = -2 Query: 388 TYESDNGCNQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKK 209 TYESD CNQN GWEGSW++WTAAYPATRFYVGLTADDKS+QWVHPKNVYY VAPV+QKK Sbjct: 218 TYESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVAQKK 277 Query: 208 DNYGGIMLWDRYFDKQTNYSSLIKYYA 128 DNYGGIMLWDRYFDKQTNYSSLIKYYA Sbjct: 278 DNYGGIMLWDRYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 80.9 bits (198), Expect = 7e-16 Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 6/92 (6%) Frame = -2 Query: 385 YESDNGCNQNF----GWEGSWNEWTAAYPATRFYVGLTADDK--SYQWVHPKNVYYSVAP 224 + D C+ N G WN+WTA YP + Y+GL A + V K +YY + P Sbjct: 213 FYDDATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYYDLLP 272 Query: 223 VSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 128 QK NYGGIMLWDR++DKQT Y +KY+A Sbjct: 273 NVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 67.8 bits (164), Expect = 6e-12 Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%) Frame = -2 Query: 340 SWNEWTAAYPATRFYVGLTAD-DKSYQWVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFDK 164 SW +W AA+P ++ Y+GL A ++ W+ K++YY + + NYGG+ ++DRYFDK Sbjct: 223 SWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDK 282 Query: 163 QTNYS 149 + NY+ Sbjct: 283 KANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 58.9 bits (141), Expect = 3e-09 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Frame = -2 Query: 340 SWNEWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFD 167 SWN WT++ +T ++GL A + + P NV S + PV ++ YGG+MLW +Y+D Sbjct: 229 SWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYD 288 Query: 166 KQTNYSSLIK 137 Q+ YSS IK Sbjct: 289 DQSGYSSSIK 298
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 55.5 bits (132), Expect = 3e-08 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Frame = -2 Query: 340 SWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFD 167 SWN+WT + A +F++GL A ++ ++ P + + P +K YGG+MLW +++D Sbjct: 230 SWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWD 289 Query: 166 KQTNYSSLI 140 + YSS I Sbjct: 290 DKNGYSSSI 298
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 53.9 bits (128), Expect = 9e-08 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 5/72 (6%) Frame = -2 Query: 337 WNEWTAAYPATRFYVGL----TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRY 173 WN+WT+ PA + Y+GL TA Y PK V S V P + YGG+MLW+R Sbjct: 224 WNQWTSI-PAKKLYIGLPAAKTAAGNGYI---PKQVLMSQVLPFLKGSSKYGGVMLWNRK 279 Query: 172 FDKQTNYSSLIK 137 FD Q YSS I+ Sbjct: 280 FDVQCGYSSAIR 291
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 52.8 bits (125), Expect = 2e-07 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = -2 Query: 340 SWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFD 167 SWN WT + A + ++GL A ++ +V P + + P +K YGG+MLW +++D Sbjct: 227 SWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYD 286 Query: 166 KQTNYSSLI 140 + YSS I Sbjct: 287 DKNGYSSSI 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 49.7 bits (117), Expect = 2e-06 Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%) Frame = -2 Query: 340 SWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYF 170 +WN+WT++ A + ++G+ A D + + P +V S V P + YGG+M+WDR+ Sbjct: 221 AWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFN 279 Query: 169 DKQTNYSSLIK 137 D Q+ YS+ IK Sbjct: 280 DAQSGYSNAIK 290
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 48.9 bits (115), Expect = 3e-06 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 3/71 (4%) Frame = -2 Query: 340 SWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYF 170 SWN+WTA +P ++ Y+GL A ++ P +V S V P + NYGG+MLW + F Sbjct: 221 SWNQWTA-FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAF 279 Query: 169 DKQTNYSSLIK 137 D YS IK Sbjct: 280 D--NGYSDSIK 288
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 46.6 bits (109), Expect = 1e-05 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = -2 Query: 340 SWNEWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFD 167 SWN+WT++ A + ++G+ A + P +V S V P + YGG+MLWDR+ D Sbjct: 227 SWNQWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFND 285 Query: 166 KQTNYSSLI 140 Q+ YS I Sbjct: 286 GQSGYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 41.6 bits (96), Expect = 5e-04 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = -2 Query: 340 SWNEWTAAYPATRFYVGLTAD-DKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFD 167 SWN+WT A + ++GL A D + P + S V P + YGG+MLW + +D Sbjct: 224 SWNQWTTVQ-ANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD 282 Query: 166 KQTNYSSLIK 137 + YSS IK Sbjct: 283 --SGYSSAIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 40.8 bits (94), Expect = 8e-04 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -2 Query: 337 WNEWTAAYPATRFYVGL-TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDK 164 WN+W A A + ++GL A + P +V S V P+ YGG+MLW +++D Sbjct: 223 WNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD- 280 Query: 163 QTNYSSLIK 137 YSS IK Sbjct: 281 -NGYSSAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 35.0 bits (79), Expect = 0.043 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 11/95 (11%) Frame = -2 Query: 385 YESDNGCNQNFG----WEGSWNEWT-AAYPATR-FYVGLTADDKSYQ---WVHPKNVYYS 233 + +D C + G +W WT + YP + ++ L A + ++ P + Sbjct: 213 FYNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSALIGQ 272 Query: 232 VAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 134 V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 273 VLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)| Length = 957 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -2 Query: 292 GLTADDKSYQWVH-PKNVYYSVAPVSQKKDNYGGIMLWD 179 G T +SYQW H P+ VY + + K+ GG+++ D Sbjct: 336 GRTPGCQSYQWTHGPQQVYKKIVVSADGKNLLGGVLVGD 374
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -2 Query: 355 FGWE----GSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIM 188 FG+E G ++ W+A + YVG K H + ++ AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 187 -LW-DRYFDKQTN 155 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348
>3HAO_RAT (P46953) 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6)| (3-HAO) (3-hydroxyanthranilic acid dioxygenase) (3-hydroxyanthranilate oxygenase) Length = 286 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 Query: 304 RFYVGLTADDKSYQWVHPKNVYYSVAPVSQK 212 R+YVG T D +W H K++ +AP+ Q+ Sbjct: 117 RYYVGDTEDVLFEKWFHCKDLGTQLAPIIQE 147
>3HAO_MOUSE (Q78JT3) 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6)| (3-HAO) (3-hydroxyanthranilic acid dioxygenase) (3-hydroxyanthranilate oxygenase) Length = 286 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -2 Query: 304 RFYVGLTADDKSYQWVHPKNVYYSVAPVSQK 212 R+YVG T D +W H K++ +AP+ Q+ Sbjct: 117 RYYVGDTEDVLFEKWFHCKDLGTQLAPIIQE 147
>PIMT_GEOSL (Q74CZ5) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)| (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) Length = 207 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = -1 Query: 284 GGRQVLPVGTPQERLLQRRAGVAEEGQLRRHHALG 180 GGR V+PVGT E++L R E+G + R + G Sbjct: 158 GGRLVIPVGTQFEQVLV-RVVKQEDGSVERENITG 191
>HYAL1_MOUSE (Q91ZJ9) Hyaluronidase-1 precursor (EC 3.2.1.35) (Hyal-1)| (Hyaluronoglucosaminidase-1) Length = 462 Score = 27.3 bits (59), Expect = 9.1 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = -2 Query: 364 NQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQWV-HPKNVYYSVAPVSQKKDNYGGIM 188 N GW WN+ A YP+ L KS +V H VA VS +D + +M Sbjct: 257 NDQLGW--LWNQSYALYPSIYLPAALMGTGKSQMYVRHRVQEALRVAIVS--RDPHVPVM 312 Query: 187 LWDRYFDKQTNY 152 + + F + T+Y Sbjct: 313 PYVQIFYEMTDY 324
>NUOJ_SHIFL (P0AFE3) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 9.1 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -1 Query: 383 RERQWVQPELWVG 345 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>NUOJ_ECOLI (P0AFE0) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 9.1 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -1 Query: 383 RERQWVQPELWVG 345 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>NUOJ_ECOL6 (P0AFE1) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 9.1 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -1 Query: 383 RERQWVQPELWVG 345 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>NUOJ_ECO57 (P0AFE2) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 9.1 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -1 Query: 383 RERQWVQPELWVG 345 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,435,142 Number of Sequences: 219361 Number of extensions: 808418 Number of successful extensions: 2407 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 2346 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2396 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 1380984984 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
