ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart25c05 |
|---|---|
| Clone Library Name | barley_pub |
>IFRH_MAIZE (P52580) Isoflavone reductase homolog IRL (EC 1.3.1.-)| Length = 309 Score = 164 bits (414), Expect = 1e-40 Identities = 76/99 (76%), Positives = 91/99 (91%) Frame = -2 Query: 472 KVLYIKPPANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHAS 293 KVLYIKPPANTLSHNEL++ WEKKTGKTF+R YVPE+AVLKQIQE+PIP+NII +IGHA+ Sbjct: 211 KVLYIKPPANTLSHNELLSLWEKKTGKTFRREYVPEEAVLKQIQESPIPLNIILAIGHAA 270 Query: 292 YIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 176 +++G+QT EI P+ GV+ASELYPDVKYTTVD+ LNRFL Sbjct: 271 FVRGEQTGFEIDPAKGVDASELYPDVKYTTVDEYLNRFL 309
>IFRH_SOLTU (P52578) Isoflavone reductase homolog (EC 1.3.1.-) (CP100)| Length = 308 Score = 141 bits (356), Expect = 7e-34 Identities = 63/99 (63%), Positives = 82/99 (82%) Frame = -2 Query: 472 KVLYIKPPANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHAS 293 K+LYIKPP N ++ NELV+ WEKKTGK +R+YVPE+ VLK IQEA +PMN+ SI H + Sbjct: 210 KILYIKPPHNIITLNELVSLWEKKTGKNLERLYVPEEQVLKNIQEASVPMNVGLSIYHTA 269 Query: 292 YIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 176 ++KGD TN EI PSFGVEASE+YPDVKYT +D++LN+++ Sbjct: 270 FVKGDHTNFEIEPSFGVEASEVYPDVKYTPIDEILNQYV 308
>IFRH_ARATH (P52577) Isoflavone reductase homolog P3 (EC 1.3.1.-)| Length = 310 Score = 131 bits (329), Expect = 1e-30 Identities = 61/98 (62%), Positives = 79/98 (80%) Frame = -2 Query: 472 KVLYIKPPANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHAS 293 K+LYIKP NTLS NE+V WEKK GK+ ++ ++PE+ +LK IQE+PIP+N++ SI HA Sbjct: 213 KILYIKPSNNTLSMNEIVTLWEKKIGKSLEKTHLPEEQLLKSIQESPIPINVVLSINHAV 272 Query: 292 YIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRF 179 ++ GD TNI I PSFGVEASELYPDVKYT+VD+ L+ F Sbjct: 273 FVNGD-TNISIEPSFGVEASELYPDVKYTSVDEYLSYF 309
>IFRH_TOBAC (P52579) Isoflavone reductase homolog A622 (EC 1.3.1.-)| Length = 310 Score = 112 bits (281), Expect = 4e-25 Identities = 48/99 (48%), Positives = 72/99 (72%) Frame = -2 Query: 472 KVLYIKPPANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHAS 293 K L+++PPAN LS NE+V+ WE K GKT +++Y+ E+ +L+ +QE P+P+ +I H+ Sbjct: 212 KTLHMRPPANILSFNEIVSLWEDKIGKTLEKLYLSEEDILQIVQEGPLPLRTNLAICHSV 271 Query: 292 YIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 176 ++ GD N E+ P GVEA+ELYP VKYTTVD+ N+F+ Sbjct: 272 FVNGDSANFEVQPPTGVEATELYPKVKYTTVDEFYNKFV 310
>IFR_MEDSA (P52575) Isoflavone reductase (EC 1.3.1.45) (IFR)| (2'-hydroxyisoflavone reductase) (NADPH:isoflavone oxidoreductase) Length = 318 Score = 102 bits (253), Expect = 7e-22 Identities = 49/99 (49%), Positives = 68/99 (68%) Frame = -2 Query: 472 KVLYIKPPANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHAS 293 K ++I+ P N L+ NE++A WEKK GKT ++ YV E+ VLK IQE+ P N + ++ H+ Sbjct: 221 KAVHIRLPENYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNYLLALYHSQ 280 Query: 292 YIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 176 IKGD EI P+ +EASE YPDV YTT D+ LN+F+ Sbjct: 281 QIKGDAV-YEIDPAKDIEASEAYPDVTYTTADEYLNQFV 318
>IFR_PEA (P52576) Isoflavone reductase (EC 1.3.1.45) (IFR)| (2'-hydroxyisoflavone reductase) (NADPH:isoflavone oxidoreductase) Length = 318 Score = 97.8 bits (242), Expect = 1e-20 Identities = 48/99 (48%), Positives = 67/99 (67%) Frame = -2 Query: 472 KVLYIKPPANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHAS 293 K ++I+ P N L+ NE++A WEKK GKT ++ YV E+ VLK IQ + P N + ++ H+ Sbjct: 221 KAVHIRLPNNYLTANEVIALWEKKIGKTLEKTYVSEEQVLKDIQTSSFPHNYLLALYHSQ 280 Query: 292 YIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 176 IKGD EI P+ VEA + YPDVKYTT D+ LN+F+ Sbjct: 281 QIKGDAV-YEIDPAKDVEAYDAYPDVKYTTADEYLNQFV 318
>IFR_CICAR (Q00016) Isoflavone reductase (EC 1.3.1.45) (IFR)| (2'-hydroxyisoflavone reductase) (NADPH:isoflavone oxidoreductase) Length = 318 Score = 92.4 bits (228), Expect = 5e-19 Identities = 45/99 (45%), Positives = 66/99 (66%) Frame = -2 Query: 472 KVLYIKPPANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHAS 293 K ++I+ P N L+ NE+V+ WEKK GKT ++ Y+ E+ VLK I + P N + ++ H+ Sbjct: 221 KAVHIRLPHNYLTSNEVVSLWEKKIGKTLEKSYISEEKVLKDINVSTFPHNYLLALYHSQ 280 Query: 292 YIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 176 IKGD EI P+ EA +LYPDVKYTT D+ L++F+ Sbjct: 281 QIKGDAV-YEIDPAKDAEAYDLYPDVKYTTADEYLDQFV 318
>LAR_DESUN (Q84V83) Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin| reductase) Length = 382 Score = 70.9 bits (172), Expect = 2e-12 Identities = 38/99 (38%), Positives = 52/99 (52%) Frame = -2 Query: 472 KVLYIKPPANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHAS 293 K ++ +P +N S NEL + WEKK G+T R V D +L E IP +I+ S H Sbjct: 219 KNVHFRPSSNCYSINELASLWEKKIGRTLPRFTVTADKLLAHAAENIIPESIVSSFTHDI 278 Query: 292 YIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 176 +I G Q N I VE LYPD K+ ++DD F+ Sbjct: 279 FINGCQVNFSIDEHSDVEIDTLYPDEKFRSLDDCYEDFV 317
>IFRH_LUPAL (P52581) Isoflavone reductase homolog (EC 1.3.1.-)| Length = 312 Score = 65.5 bits (158), Expect = 7e-11 Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 2/101 (1%) Frame = -2 Query: 472 KVLYIKPPANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHAS 293 K +Y++PP N L+H EL+ WE+ GK ++ + E L ++ + +GH Sbjct: 215 KTVYLRPPENILTHKELIEKWEELIGKQLEKNSISEKDFLSTLKGLDFASQV--GVGHFY 272 Query: 292 YI--KGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLNRFL 176 +I +G TN EI + G EASELYP+V YT +D L ++ Sbjct: 273 HIFYEGCLTNFEIGEN-GEEASELYPEVNYTRMDQYLKVYV 312
>RS4E_METJA (P54039) 30S ribosomal protein S4e| Length = 244 Score = 34.3 bits (77), Expect = 0.17 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Frame = -2 Query: 394 KTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDV 215 K + VY D +L I E I +I F +G +YI G + + A +E +YPD+ Sbjct: 155 KAEEDVYKTGDTLLISIPEQEIKAHIPFEVGKLAYITGGKHVGDFAKIVEIERRGIYPDI 214 Query: 214 ---------KYTTVDD 194 K+ TV D Sbjct: 215 VTLENMDGEKFKTVKD 230
>RS4E_METMP (P62428) 30S ribosomal protein S4e| Length = 244 Score = 32.0 bits (71), Expect = 0.83 Identities = 21/60 (35%), Positives = 28/60 (46%) Frame = -2 Query: 394 KTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDV 215 K + VY D+VL I E I ++ F G +YI G + E A VE LY D+ Sbjct: 155 KAEEDVYKTGDSVLISIPEQSIAGHVAFGEGKLAYITGGKHVGEFAKIVEVENRALYSDI 214
>HISZ_SYNY3 (P74592) ATP phosphoribosyltransferase regulatory subunit| Length = 401 Score = 30.4 bits (67), Expect = 2.4 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 182 PVEQVVDGGVLDVRVQLARLHPERRRDLDVG 274 PV+ +G QL R HP+RR +LD+G Sbjct: 341 PVDDTAEGATFRHAQQLRRQHPDRRVELDLG 371
>PROA_PASMU (Q9CM98) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 420 Score = 30.4 bits (67), Expect = 2.4 Identities = 14/38 (36%), Positives = 27/38 (71%) Frame = +2 Query: 128 RHHQLASNVHSRSMSSEEPVEQVVDGGVLDVRVQLARL 241 R + +A++VH +S +PV Q++DGG+LD +++ R+ Sbjct: 75 RLNDIANDVH-HVISLADPVGQLIDGGILDSGLKIERV 111
>RS4E_METVA (P14023) 30S ribosomal protein S4e| Length = 244 Score = 30.4 bits (67), Expect = 2.4 Identities = 18/60 (30%), Positives = 29/60 (48%) Frame = -2 Query: 394 KTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDV 215 K + +Y D+VL + E + ++ F+ G +YI G + E A VE LY D+ Sbjct: 155 KAEEDIYKTGDSVLVSLPEQAVVGHVEFNEGKLAYITGGKHVGEFAKVVEVEKRTLYSDI 214
>PEPCK_ARATH (Q9T074) Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (PEP| carboxykinase) (Phosphoenolpyruvate carboxylase) (PEPCK) Length = 671 Score = 30.0 bits (66), Expect = 3.2 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 12/104 (11%) Frame = +3 Query: 186 LSKSSTVVYLTSGYSSLASTPNDG------------AISMLVWSPLMYDACPIEKMMFIG 329 L+ + T+ + SGY++L + DG + ++ P Y A EKM G Sbjct: 495 LNLAQTMYHFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMKSQG 554 Query: 330 IGASWICFRTASSGTYTLWNVLPVFFSHGATSSLCDSVLAGGLM 461 W+ S G+Y + N + + + T + D++ +G L+ Sbjct: 555 -ATGWLVNTGWSGGSYGVGNRIKLAY----TRKIIDAIHSGSLL 593
>MVIM_SALTY (P37168) Virulence factor mviM| Length = 307 Score = 29.6 bits (65), Expect = 4.1 Identities = 12/28 (42%), Positives = 19/28 (67%) Frame = +2 Query: 137 QLASNVHSRSMSSEEPVEQVVDGGVLDV 220 Q+ +++H R+ S E V+ V DGG+ DV Sbjct: 208 QITTSMHRRAGSQRESVQAVTDGGLYDV 235
>PEPC2_UROPA (Q9XFA2) Phosphoenolpyruvate carboxykinase [ATP] 2 (EC 4.1.1.49)| Length = 626 Score = 29.3 bits (64), Expect = 5.4 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 12/104 (11%) Frame = +3 Query: 186 LSKSSTVVYLTSGYSSLASTPNDG------------AISMLVWSPLMYDACPIEKMMFIG 329 L+ + T+ + SGY+++ + DG + +++ P Y A EKM G Sbjct: 450 LNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYG 509 Query: 330 IGASWICFRTASSGTYTLWNVLPVFFSHGATSSLCDSVLAGGLM 461 W+ S G Y + N + + + T + D++ +G L+ Sbjct: 510 -ATGWLVNTGWSGGRYGVGNRIKLPY----TRKIIDAIHSGELL 548
>RPOB_UREPA (Q9PQV6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1434 Score = 29.3 bits (64), Expect = 5.4 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -2 Query: 340 EAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDD 194 E P MNI + AS K D+ +AP + VE + D KY T + Sbjct: 684 ETPEGMNIGLIMSLASLAKVDENGFIVAPYYVVEDGVVKEDYKYLTAHE 732
>MNHD_STAAR (Q6GID9) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +3 Query: 255 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHGATSS 428 G M VW P Y A PI + F G + + G Y + L +FFS + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAITRTLSLFFSDNVSFS 275
>PEPC1_UROPA (P49292) Phosphoenolpyruvate carboxykinase [ATP] 1 (EC 4.1.1.49)| Length = 624 Score = 28.5 bits (62), Expect = 9.2 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 12/104 (11%) Frame = +3 Query: 186 LSKSSTVVYLTSGYSSLASTPNDG------------AISMLVWSPLMYDACPIEKMMFIG 329 L+ + T+ + SGY+++ + DG + +++ P Y A EKM G Sbjct: 448 LNLAQTMYHFISGYTAIVAGTEDGVKEPTATFSACFGAAFIMYHPTKYAAMLAEKMQKYG 507 Query: 330 IGASWICFRTASSGTYTLWNVLPVFFSHGATSSLCDSVLAGGLM 461 W+ S G Y + N + + + T + D++ +G L+ Sbjct: 508 -RTGWLVNTGWSGGRYGVGNRIKLPY----TRKIIDAIHSGELL 546
>GAG_SFV3L (P27400) Gag polyprotein (Core polyprotein)| Length = 643 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/78 (21%), Positives = 34/78 (43%) Frame = -2 Query: 451 PANTLSHNELVAPWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQT 272 P N L HN + APW + ++ + D ++ P + + ++I GD+ Sbjct: 71 PVNPLVHNTIEAPWGE-----LRQAFEDLDVAEGTLRFGP--------LANGNWIPGDEY 117 Query: 271 NIEIAPSFGVEASELYPD 218 ++E P E +++ D Sbjct: 118 SMEFQPPLAQEIAQMQRD 135
>ENO_STRAW (Q82HH5) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 428 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/37 (48%), Positives = 21/37 (56%) Frame = -2 Query: 319 IIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKY 209 II +I A YI G+Q IA + V ASE Y D KY Sbjct: 222 IIEAIKQAGYIPGEQ----IALALDVAASEFYKDGKY 254
>MNHD_STAAW (P60687) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +3 Query: 255 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHGATSS 428 G M VW P Y A PI + F G + + G Y + L +FFS + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAU (P60686) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +3 Query: 255 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHGATSS 428 G M VW P Y A PI + F G + + G Y + L +FFS + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAS (Q6GAX7) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +3 Query: 255 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHGATSS 428 G M VW P Y A PI + F G + + G Y + L +FFS + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAN (P60685) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +3 Query: 255 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHGATSS 428 G M VW P Y A PI + F G + + G Y + L +FFS + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAM (P60684) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +3 Query: 255 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHGATSS 428 G M VW P Y A PI + F G + + G Y + L +FFS + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MNHD_STAAC (Q5HHD6) Na(+)/H(+) antiporter subunit D (Mnh complex subunit D)| Length = 498 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = +3 Query: 255 GAISMLVWSPLMYDACPIEKMMFIGIGASWICFRTASSGTYTLWNVLPVFFSHGATSS 428 G M VW P Y A PI + F G + + G Y + L +FFS + S Sbjct: 225 GVFPMFVWLPSAYYAPPIPIIAFFGALLTKV-------GVYAIARTLSLFFSDNVSFS 275
>MYPT1_HUMAN (O14974) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit) Length = 1030 Score = 28.5 bits (62), Expect = 9.2 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = +3 Query: 102 QQHITVDSSDITS*PQTYTVGACLQRNLLSKSSTVVYLTSGYSS 233 Q + S T+ T T A LQ++LLS +ST +T+G SS Sbjct: 559 QDDLISSSVPSTTSTPTVTSAAGLQKSLLSSTSTTTKITTGSSS 602
>YBL4_YEAST (P38211) Hypothetical protein YBR004C precursor| Length = 433 Score = 28.5 bits (62), Expect = 9.2 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 19/118 (16%) Frame = +3 Query: 177 RNLLSKSSTVVYLTSGYSSLASTPNDGAISMLVWSPLMYDACPIEKMMFIGIGASW---- 344 R + K+S + +LTS L S ++ + + C I + SW Sbjct: 145 RTIAKKTSLLFFLTSAAGFLTSIYSEPLSFFFAFVGIWSRECTISVPVLGQFDISWRYWF 204 Query: 345 -------ICFRTASS--------GTYTLWNVLPVFFSHGATSSLCDSVLAGGLMYSTL 473 CF AS G Y +++++ + + ++C +L+G LM+S L Sbjct: 205 PYSFISMACFTLASLNRSNCVLLGIYFIFDLIELTKNRKFVKAICFPLLSGSLMFSAL 262 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,625,277 Number of Sequences: 219361 Number of extensions: 1189676 Number of successful extensions: 3903 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 3807 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3897 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
