ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY110531.1| Zea mays CL1726_-1 mRNA sequence 210 3e-51
2gb|U33318.1|ZMU33318 Zea mays sulfur starvation induced isoflavo... 210 3e-51
3ref|NM_183485.2| Oryza sativa (japonica cultivar-group), mRNA 92 2e-15
4gb|AY651065.1| Musa acuminata isoflavone reductase (IFR) mRNA, p... 92 2e-15
5gb|AY071920.1| Oryza sativa isoflavone reductase-like protein mR... 92 2e-15
6dbj|AK109339.2| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
7dbj|AK102701.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 2e-15
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
9dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 90 8e-15
10ref|NM_183484.2| Oryza sativa (japonica cultivar-group), mRNA 62 2e-06
11dbj|AK119550.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
12dbj|AK104735.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
13dbj|AK104669.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
14dbj|AK104238.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
15dbj|AK104189.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
16dbj|AK098946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
17dbj|AK061325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
18gb|AY837829.1| Linum usitatissimum putative phenylcoumaran benzy... 60 7e-06
19gb|AF242490.2|AF242490 Pinus taeda phenylcoumaran benzylic ether... 50 0.007
20gb|AF081678.1|AF081678 Pinus taeda phenylcoumaran benzylic ether... 50 0.007
21gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome... 46 0.10
22gb|AC122861.4| Mus musculus BAC clone RP23-140G16 from 19, compl... 46 0.10
23emb|BX649345.16| Zebrafish DNA sequence from clone DKEY-161F11 i... 44 0.41
24emb|AL031274.1|HS798A17 Human DNA sequence from clone RP4-798A17... 42 1.6
25emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 i... 42 1.6
26emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster 42 1.6
27gb|AC121523.6| Mus musculus chromosome 18, clone RP24-92N23, com... 40 6.4
28emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in... 40 6.4
29gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 6.4
30gb|AC161177.4| Mus musculus chromosome 18, clone RP24-131H12, co... 40 6.4
31ref|XM_310909.2| Anopheles gambiae str. PEST ENSANGP00000012709 ... 40 6.4 
>gb|AY110531.1| Zea mays CL1726_-1 mRNA sequence
          Length = 1315

 Score =  210 bits (106), Expect = 3e-51
 Identities = 160/178 (89%)
 Strand = Plus / Minus

                                                                       
Query: 296 cgcgtgcccgatcgagaagatgatgttcatcgggattggcgcctcttggatctgcttcag 355
           ||||||||||||||  | |||||||||||  ||||| |||| ||||||||||||||| ||
Sbjct: 840 cgcgtgcccgatcgccaggatgatgttcagagggatcggcgactcttggatctgcttgag 781

                                                                       
Query: 356 aacggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacgg 415
            ||||| ||||| || |||||| ||| | ||||||||||||||||||||||||||||| |
Sbjct: 780 cacggcttcctccggcacgtactcccgccggaacgtcttgccggtcttcttctcccacag 721

                                                                     
Query: 416 cgccaccagctcgttgtgcgacagcgtgttggccggcggcttgatgtacagcaccttg 473
           || || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cgacagcagctcgttgtgcgacagcgtgttggccggcggcttgatgtacagcaccttg 663



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 38/41 (92%)
 Strand = Plus / Minus

                                                    
Query: 195 tcgtcgacggtggtgtacttgacgtcagggtacagctcgct 235
           ||||||||||||||||||||||| || |||||||| |||||
Sbjct: 941 tcgtcgacggtggtgtacttgacatccgggtacagttcgct 901
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>gb|U33318.1|ZMU33318 Zea mays sulfur starvation induced isoflavone reductase-like IRL
           (IRL) mRNA, complete cds
          Length = 1325

 Score =  210 bits (106), Expect = 3e-51
 Identities = 160/178 (89%)
 Strand = Plus / Minus

                                                                       
Query: 296 cgcgtgcccgatcgagaagatgatgttcatcgggattggcgcctcttggatctgcttcag 355
           ||||||||||||||  | |||||||||||  ||||| |||| ||||||||||||||| ||
Sbjct: 840 cgcgtgcccgatcgccaggatgatgttcagagggatcggcgactcttggatctgcttgag 781

                                                                       
Query: 356 aacggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacgg 415
            ||||| ||||| || |||||| ||| | ||||||||||||||||||||||||||||| |
Sbjct: 780 cacggcttcctccggcacgtactcccgccggaacgtcttgccggtcttcttctcccacag 721

                                                                     
Query: 416 cgccaccagctcgttgtgcgacagcgtgttggccggcggcttgatgtacagcaccttg 473
           || || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cgacagcagctcgttgtgcgacagcgtgttggccggcggcttgatgtacagcaccttg 663



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 195 tcgtcgacggtggtgtacttgacgtcagggtacagctcgctcgcctccacccc 247
           ||||||||||||||||||||||| || |||||||| ||||| || ||||||||
Sbjct: 941 tcgtcgacggtggtgtacttgacatccgggtacagttcgctggcgtccacccc 889
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>ref|NM_183485.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1207

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 gatgttcatcgggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgta 376
           |||||||| ||||||   || ||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 857 gatgttcaacgggatctccgactcctggatttgcttgagcacggcgtcctcgggcacgta 798

                                                                       
Query: 377 caccctctggaacgtcttgccggtcttcttctcccacggcgccaccagctcgttgtgcga 436
           ||||||||  | | |||| || ||||||||||||||| ||||||||||||| | ||||||
Sbjct: 797 caccctctccagcttcttccccgtcttcttctcccacagcgccaccagctcctcgtgcga 738

             
Query: 437 ca 438
           ||
Sbjct: 737 ca 736



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 172 ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 220
           ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 999 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 951
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>gb|AY651065.1| Musa acuminata isoflavone reductase (IFR) mRNA, partial cds
          Length = 550

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 76/86 (88%)
 Strand = Plus / Minus

                                                                       
Query: 327 gggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgtacaccctctgg 386
           ||||||||||||||||||||||||||||| ||  | ||||| |||||||| ||||||| |
Sbjct: 434 gggattggcgcctcttggatctgcttcaggacttcttcctccgggacgtagaccctctcg 375

                                     
Query: 387 aacgtcttgccggtcttcttctccca 412
           || |||||||||  ||||||||||||
Sbjct: 374 aaggtcttgccgaccttcttctccca 349



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 64/76 (84%)
 Strand = Plus / Minus

                                                                       
Query: 211 acttgacgtcagggtacagctcgctcgcctccaccccgaacgacggcgcgatctcgatgt 270
           |||||||||||||| ||||| |  | |||||||| ||||| || ||| ||||||||| ||
Sbjct: 550 acttgacgtcagggaacagcgccgtggcctccacgccgaaagatggctcgatctcgaagt 491

                           
Query: 271 tggtctggtcgccctt 286
           |||| ||||| |||||
Sbjct: 490 tggtgtggtcaccctt 475
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>gb|AY071920.1| Oryza sativa isoflavone reductase-like protein mRNA, complete cds
          Length = 1203

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 gatgttcatcgggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgta 376
           |||||||| ||||||   || ||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 854 gatgttcaacgggatctccgactcctggatttgcttgagcacggcgtcctcgggcacgta 795

                                                                       
Query: 377 caccctctggaacgtcttgccggtcttcttctcccacggcgccaccagctcgttgtgcga 436
           ||||||||  | | |||| || ||||||||||||||| ||||||||||||| | ||||||
Sbjct: 794 caccctctccagcttcttccccgtcttcttctcccacagcgccaccagctcctcgtgcga 735

             
Query: 437 ca 438
           ||
Sbjct: 734 ca 733



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 172 ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 220
           ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 996 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 948
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>dbj|AK109339.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-E10, full
           insert sequence
          Length = 1206

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 gatgttcatcgggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgta 376
           |||||||| ||||||   || ||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 856 gatgttcaacgggatctccgactcctggatttgcttgagcacggcgtcctcgggcacgta 797

                                                                       
Query: 377 caccctctggaacgtcttgccggtcttcttctcccacggcgccaccagctcgttgtgcga 436
           ||||||||  | | |||| || ||||||||||||||| ||||||||||||| | ||||||
Sbjct: 796 caccctctccagcttcttccccgtcttcttctcccacagcgccaccagctcctcgtgcga 737

             
Query: 437 ca 438
           ||
Sbjct: 736 ca 735



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 172 ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 220
           ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 998 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 950
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>dbj|AK102701.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033103L17, full
           insert sequence
          Length = 1207

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                       
Query: 317 gatgttcatcgggattggcgcctcttggatctgcttcagaacggcgtcctcggggacgta 376
           |||||||| ||||||   || ||| ||||| ||||| || |||||||||||||| |||||
Sbjct: 857 gatgttcaacgggatctccgactcctggatttgcttgagcacggcgtcctcgggcacgta 798

                                                                       
Query: 377 caccctctggaacgtcttgccggtcttcttctcccacggcgccaccagctcgttgtgcga 436
           ||||||||  | | |||| || ||||||||||||||| ||||||||||||| | ||||||
Sbjct: 797 caccctctccagcttcttccccgtcttcttctcccacagcgccaccagctcctcgtgcga 738

             
Query: 437 ca 438
           ||
Sbjct: 737 ca 736



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                            
Query: 172 ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 220
           ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 999 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 951
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                          
Query: 342    tggatctgcttcagaacggcgtcctcggggacgtacaccctctggaacgtcttgccggtc 401
              ||||| ||||| || |||||||||||||| |||||||||||||  | | |||| || |||
Sbjct: 326620 tggatttgcttgagcacggcgtcctcgggcacgtacaccctctccagcttcttccccgtc 326679

                                                   
Query: 402    ttcttctcccacggcgccaccagctcgttgtgcgaca 438
              |||||||||||| ||||||||||||| | ||||||||
Sbjct: 326680 ttcttctcccacagcgccaccagctcctcgtgcgaca 326716



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                          
Query: 357    acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
              |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 322071 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 322130

                                                     
Query: 417    gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
                ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 322131 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 322169



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                               
Query: 172    ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 220
              ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 326336 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 326384
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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0005A05
          Length = 190834

 Score = 89.7 bits (45), Expect = 8e-15
 Identities = 84/97 (86%)
 Strand = Plus / Plus

                                                                         
Query: 342   tggatctgcttcagaacggcgtcctcggggacgtacaccctctggaacgtcttgccggtc 401
             ||||| ||||| || |||||||||||||| |||||||||||||  | | |||| || |||
Sbjct: 78458 tggatttgcttgagcacggcgtcctcgggcacgtacaccctctccagcttcttccccgtc 78517

                                                  
Query: 402   ttcttctcccacggcgccaccagctcgttgtgcgaca 438
             |||||||||||| ||||||||||||| | ||||||||
Sbjct: 78518 ttcttctcccacagcgccaccagctcctcgtgcgaca 78554



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Plus

                                                                         
Query: 357   acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
             |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 73909 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 73968

                                                    
Query: 417   gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
               ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 73969 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 74007



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                              
Query: 172   ttcagaggaacctgttgagcaagtcgtcgacggtggtgtacttgacgtc 220
             ||||||||| |||||||||  |||| |||||||||||||||| ||||||
Sbjct: 78174 ttcagaggagcctgttgaggtagtcatcgacggtggtgtactggacgtc 78222
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>ref|NM_183484.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1256

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 357 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
           |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 838 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 779

                                                  
Query: 417 gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 778 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 740
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>dbj|AK119550.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E04, full
           insert sequence
          Length = 1265

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 357 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
           |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 417 gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>dbj|AK104735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D01, full
           insert sequence
          Length = 1260

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 357 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
           |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 417 gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>dbj|AK104669.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-B02, full
           insert sequence
          Length = 1256

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 357 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
           |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 838 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 779

                                                  
Query: 417 gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 778 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 740
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>dbj|AK104238.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H12, full
           insert sequence
          Length = 1260

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 357 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
           |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 417 gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>dbj|AK104189.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-C06, full
           insert sequence
          Length = 1259

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 357 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
           |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 417 gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>dbj|AK098946.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045H04, full
           insert sequence
          Length = 1256

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 357 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
           |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 854 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 795

                                                  
Query: 417 gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 794 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 756
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>dbj|AK061325.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G05, full
           insert sequence
          Length = 1265

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                       
Query: 357 acggcgtcctcggggacgtacaccctctggaacgtcttgccggtcttcttctcccacggc 416
           |||||||||||||| |||||||| ||||  | | |||| || |||||||||||||||   
Sbjct: 842 acggcgtcctcgggcacgtacactctctccagcttcttccccgtcttcttctcccacatg 783

                                                  
Query: 417 gccaccagctcgttgtgcgacagcgtgttggccggcggc 455
             ||||||||||| ||||||||  ||||| |||||||||
Sbjct: 782 ctcaccagctcgtcgtgcgacatggtgttcgccggcggc 744
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>gb|AY837829.1| Linum usitatissimum putative phenylcoumaran benzylic ether
           reductase mRNA, partial cds
          Length = 625

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                       
Query: 204 gtggtgtacttgacgtcagggtacagctcgctcgcctccaccccgaacgacggcgcgatc 263
           ||||||||||| || |||||||| |||||   ||||||  |||||||||||||| |||||
Sbjct: 451 gtggtgtacttaacatcagggtaaagctcagacgcctctgccccgaacgacggctcgatc 392

                         
Query: 264 tcgatgttggtctg 277
           |||| || ||||||
Sbjct: 391 tcgaagtaggtctg 378
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>gb|AF242490.2|AF242490 Pinus taeda phenylcoumaran benzylic ether reductase PT1 mRNA,
           complete cds
          Length = 1204

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 195 tcgtcgacggtggtgtacttgacgtcagggtacagct 231
           ||||||||||||||||| || || |||||||||||||
Sbjct: 927 tcgtcgacggtggtgtatttcacatcagggtacagct 891
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>gb|AF081678.1|AF081678 Pinus taeda phenylcoumaran benzylic ether reductase (DDCBER1) mRNA,
           complete cds
          Length = 1204

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                
Query: 195 tcgtcgacggtggtgtacttgacgtcagggtacagct 231
           ||||||||||||||||| || || |||||||||||||
Sbjct: 927 tcgtcgacggtggtgtatttcacatcagggtacagct 891
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>gb|AC126029.3| Mus musculus BAC clone RP23-389K5 from chromosome 19, complete sequence
          Length = 212472

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 85     aaaccaacaaaagtaaccagcag 107
              |||||||||||||||||||||||
Sbjct: 203122 aaaccaacaaaagtaaccagcag 203100
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>gb|AC122861.4| Mus musculus BAC clone RP23-140G16 from 19, complete sequence
          Length = 205150

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 85     aaaccaacaaaagtaaccagcag 107
              |||||||||||||||||||||||
Sbjct: 175359 aaaccaacaaaagtaaccagcag 175381
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>emb|BX649345.16| Zebrafish DNA sequence from clone DKEY-161F11 in linkage group 11,
              complete sequence
          Length = 138432

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 21     attgcttaaagcaaaacataca 42
              ||||||||||||||||||||||
Sbjct: 108043 attgcttaaagcaaaacataca 108022
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>emb|AL031274.1|HS798A17 Human DNA sequence from clone RP4-798A17 on chromosome 1q24 Contains
             the 3' end of the FMO1 gene for flavin containing
             monooxygenase 1, a high-mobility group box 1 (HMGB1)
             pseudogene, the FMO4 gene for flavin containing
             monooxygenase 4, the TOP1P1 gene for topoisomerase (DNA) I
             pseudogene 1 and a signal recognition particle 14kDa
             (homologous Alu RNA binding protein) (SRP14) pseudogene,
             complete sequence
          Length = 130467

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    gtggtcccaagttatttgttc 63
             |||||||||||||||||||||
Sbjct: 96450 gtggtcccaagttatttgttc 96470
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>emb|BX293568.7| Zebrafish DNA sequence from clone CH211-215F13 in linkage group 20,
             complete sequence
          Length = 221849

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 38    atacagtggtcccaagttatt 58
             |||||||||||||||||||||
Sbjct: 90353 atacagtggtcccaagttatt 90333
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>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster
          Length = 64650

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 189  agcaagtcgtcgacggtggtgtact 213
            |||| ||||||||||||||||||||
Sbjct: 4503 agcatgtcgtcgacggtggtgtact 4527
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>gb|AC121523.6| Mus musculus chromosome 18, clone RP24-92N23, complete sequence
          Length = 202346

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aacatacagtggtcccaagt 54
             ||||||||||||||||||||
Sbjct: 29850 aacatacagtggtcccaagt 29831
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>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5,
             complete sequence
          Length = 144909

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    acagtggtcccaagttattt 59
             ||||||||||||||||||||
Sbjct: 29708 acagtggtcccaagttattt 29689
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 246     ccgaacgacggcgcgatctcgatg 269
               ||||||||||||||| ||||||||
Sbjct: 2910380 ccgaacgacggcgcgttctcgatg 2910357
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>gb|AC161177.4| Mus musculus chromosome 18, clone RP24-131H12, complete sequence
          Length = 189231

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aacatacagtggtcccaagt 54
             ||||||||||||||||||||
Sbjct: 83677 aacatacagtggtcccaagt 83658
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>ref|XM_310909.2| Anopheles gambiae str. PEST ENSANGP00000012709 (ENSANGG00000010220),
            partial mRNA
          Length = 2439

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 301  gcccgatcgagaagatgatg 320
            ||||||||||||||||||||
Sbjct: 1828 gcccgatcgagaagatgatg 1809


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,251,429
Number of Sequences: 3902068
Number of extensions: 3251429
Number of successful extensions: 60238
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60111
Number of HSP's gapped (non-prelim): 117
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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