Clone Information

BLAST Search Result

Clone Name	rbart25c04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	GGPPS_HEVBR (Q94ID7) Geranylgeranyl pyrophosphate synthetase, ch...	141	1e-33
2	GGPPS_CATRO (Q42698) Geranylgeranyl pyrophosphate synthetase, ch...	138	9e-33
3	GGPP1_ARATH (P34802) Geranylgeranyl pyrophosphate synthetase 1, ...	134	1e-31
4	GGPPS_SINAL (Q43133) Geranylgeranyl pyrophosphate synthetase, ch...	133	3e-31
5	GGPPS_CAPAN (P80042) Geranylgeranyl pyrophosphate synthetase, ch...	130	2e-30
6	GGPP3_ARATH (Q9LUD9) Geranylgeranyl pyrophosphate synthetase 3, ...	120	2e-27
7	GGPP4_ARATH (Q9SLG2) Geranylgeranyl pyrophosphate synthetase 4 p...	113	3e-25
8	GGPP2_ARATH (O04046) Geranylgeranyl pyrophosphate synthetase 2 p...	111	1e-24
9	GGPP6_ARATH (O22043) Geranylgeranyl pyrophosphate synthetase 6, ...	110	2e-24
10	CRTE_CYAPA (P48368) Geranylgeranyl pyrophosphate synthetase homo...	91	2e-18
11	ISPA_ECOLI (P22939) Geranyltranstransferase (EC 2.5.1.10) (Farne...	72	1e-12
12	ISPA_BRAJA (Q45220) Probable geranyltranstransferase (EC 2.5.1.1...	69	5e-12
13	ISPA_HAEIN (P45204) Geranyltranstransferase (EC 2.5.1.10) (Farne...	68	1e-11
14	ISPA_MICLU (O66126) Geranyltranstransferase (EC 2.5.1.10) (Farne...	64	2e-10
15	ISPA_RHISN (P55539) Probable geranyltranstransferase (EC 2.5.1.1...	64	2e-10
16	ISPA_BACST (Q08291) Geranyltranstransferase (EC 2.5.1.10) (Farne...	57	3e-08
17	PREA_SYNY3 (P72580) Prenyl transferase (EC 2.5.1.-)	56	6e-08
18	ISPA_BACSU (P54383) Geranyltranstransferase (EC 2.5.1.10) (Farne...	55	1e-07
19	PREA_CYAPA (P31171) Prenyl transferase (EC 2.5.1.-)	55	1e-07
20	PREA_CYACA (Q9TLS1) Prenyl transferase (EC 2.5.1.-)	54	3e-07
21	ISPB_HAEIN (P44916) Octaprenyl-diphosphate synthase (EC 2.5.1.-)...	50	3e-06
22	IDSA_METTH (O26156) Bifunctional short chain isoprenyl diphospha...	49	6e-06
23	IDSA_METTM (Q53479) Bifunctional short chain isoprenyl diphospha...	49	7e-06
24	COQ1_NEUCR (Q7S565) Probable hexaprenyl pyrophosphate synthetase...	49	7e-06
25	CRTE_RHOCA (P17060) Geranylgeranyl pyrophosphate synthetase (EC ...	48	1e-05
26	HEPS2_BACST (P55785) Heptaprenyl diphosphate synthase component ...	48	2e-05
27	COQ1_YARLI (Q6CBH3) Probable hexaprenyl pyrophosphate synthetase...	47	2e-05
28	HEPS2_BACSU (P31114) Heptaprenyl diphosphate synthase component ...	47	3e-05
29	DPS1_SCHPO (O43091) Decaprenyl-diphosphate synthase subunit 1 (E...	47	4e-05
30	ISPB_SHIFL (P0AD58) Octaprenyl-diphosphate synthase (EC 2.5.1.-)...	47	4e-05
31	ISPB_ECOLI (P0AD57) Octaprenyl-diphosphate synthase (EC 2.5.1.-)...	47	4e-05
32	PREA_PORPU (P51268) Prenyl transferase (EC 2.5.1.-)	46	6e-05
33	COQ1_YEAST (P18900) Hexaprenyl pyrophosphate synthetase, mitocho...	45	8e-05
34	IDSA_METJA (Q58270) Bifunctional short chain isoprenyl diphospha...	45	8e-05
35	ISPA_BUCAP (Q8K9A0) Geranyltranstransferase (EC 2.5.1.10) (Farne...	44	3e-04
36	DPS1_HUMAN (Q5T2R2) Decaprenyl-diphosphate synthase subunit 1 (E...	43	4e-04
37	DPS1_MOUSE (Q33DR2) Decaprenyl-diphosphate synthase subunit 1 (E...	43	5e-04
38	ISPA_BUCAI (P57537) Geranyltranstransferase (EC 2.5.1.10) (Farne...	42	7e-04
39	GGPS_SULAC (P39464) Geranylgeranyl pyrophosphate synthetase (GGP...	42	9e-04
40	GGPS_SULSO (P95999) Geranylgeranyl pyrophosphate synthetase (GGP...	40	0.003
41	GGPPS_MYCTU (P0A5H8) Probable geranylgeranyl pyrophosphate synth...	39	0.010
42	GGPPS_MYCBO (P0A5H9) Probable geranylgeranyl pyrophosphate synth...	39	0.010
43	GGR_ARATH (Q39108) Geranylgeranyl pyrophosphate synthase-related...	39	0.010
44	GGPPS_ASHGO (Q758K0) Geranylgeranyl pyrophosphate synthetase (GG...	35	0.14
45	CRTE_RHOS4 (P54976) Geranylgeranyl pyrophosphate synthetase (EC ...	33	0.32
46	FPPS2_ARATH (Q43315) Farnesyl pyrophosphate synthetase 2 (FPP sy...	33	0.54
47	FPPS1_ARATH (Q09152) Farnesyl pyrophosphate synthetase 1, mitoch...	33	0.54
48	FPPS1_PARAR (O24241) Farnesyl pyrophosphate synthetase 1 (FPP sy...	32	0.71
49	FPPS1_LUPAL (P49351) Farnesyl pyrophosphate synthetase 1 (FPP sy...	32	0.71
50	FPPS2_LUPAL (P49352) Farnesyl pyrophosphate synthetase 2 (FPP sy...	32	0.93
51	ISPA_AQUAE (O66952) Geranyltranstransferase (EC 2.5.1.10) (Farne...	32	0.93
52	FPPS2_PARAR (O24242) Farnesyl pyrophosphate synthetase 2 (FPP sy...	31	2.1
53	SYE2_THEMA (Q9X2I8) Glutamyl-tRNA synthetase 2 (EC 6.1.1.17) (Gl...	31	2.1
54	MTC2_YEAST (P53185) Protein MTC2	30	2.7
55	FPPS_MAIZE (P49353) Farnesyl pyrophosphate synthetase (FPP synth...	30	3.5
56	FPPS_ARTAN (P49350) Farnesyl pyrophosphate synthetase (FPP synth...	29	6.0
57	MSP1_PLAFK (P04932) Merozoite surface protein 1 precursor (Meroz...	29	6.0
58	DLEC1_RAT (Q68FQ8) Deleted in lung and esophageal cancer protein...	29	6.0
59	MSP1_PLAFW (P04933) Merozoite surface protein 1 precursor (Meroz...	29	6.0
60	NUON_BUCBP (Q89AT4) NADH-quinone oxidoreductase chain N (EC 1.6....	29	7.8
61	FLPA_METTH (O27283) Fibrillarin-like pre-rRNA-processing protein	29	7.8

>GGPPS_HEVBR (Q94ID7) Geranylgeranyl pyrophosphate synthetase, chloroplast|
           precursor (GGPP synthetase) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 370

 Score =  141 bits (355), Expect = 1e-33
 Identities = 71/87 (81%), Positives = 79/87 (90%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           YAR IGLLFQVVDDILDVTKSS+ELGKTAGKDL +DK TYPKLLG+EKSREFAEKL  +A
Sbjct: 284 YARDIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEA 343

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           +EQLA F+ EKAAPL+ LANYIA+RQN
Sbjct: 344 QEQLAGFDPEKAAPLIALANYIAHRQN 370

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>GGPPS_CATRO (Q42698) Geranylgeranyl pyrophosphate synthetase, chloroplast|
           precursor (GGPP synthetase) (GGPS) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 357

 Score =  138 bits (347), Expect = 9e-33
 Identities = 69/87 (79%), Positives = 78/87 (89%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           +AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL +DK TYPKLLG++KSREFAEKL  +A
Sbjct: 271 FARCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIDKSREFAEKLNREA 330

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           +EQLA F+ EKAAPL+ LANYIAYR N
Sbjct: 331 QEQLAEFDPEKAAPLIALANYIAYRDN 357

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>GGPP1_ARATH (P34802) Geranylgeranyl pyrophosphate synthetase 1, chloroplast|
           precursor (GGPP synthetase 1) (GGPS1) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 371

 Score =  134 bits (338), Expect = 1e-31
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           +AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL +DK TYPK++GLEKSREFAEKL  +A
Sbjct: 285 FARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYPKIMGLEKSREFAEKLNREA 344

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           ++QL  F+ +K APLL LANYIAYRQN
Sbjct: 345 RDQLLGFDSDKVAPLLALANYIAYRQN 371

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>GGPPS_SINAL (Q43133) Geranylgeranyl pyrophosphate synthetase, chloroplast|
           precursor (GGPP synthetase) (GGPS) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 366

 Score =  133 bits (334), Expect = 3e-31
 Identities = 67/87 (77%), Positives = 77/87 (88%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           +AR IGLLFQVVDDILDVTKSS+ELGKTAGKDL +DK TYPKL+GLEKSREFAEKL ++A
Sbjct: 280 FARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIADKLTYPKLMGLEKSREFAEKLNTEA 339

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           ++QL  F+ +K APLL LANYIA RQN
Sbjct: 340 RDQLLGFDSDKVAPLLALANYIANRQN 366

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>GGPPS_CAPAN (P80042) Geranylgeranyl pyrophosphate synthetase, chloroplast|
           precursor (GGPP synthetase) (GGPS) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 369

 Score =  130 bits (327), Expect = 2e-30
 Identities = 66/87 (75%), Positives = 75/87 (86%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           +AR IGLLFQVVDDILDVTKSSEELGKTAGKDL  DKTTYPKLLGLEK++EFA +L  +A
Sbjct: 283 FARCIGLLFQVVDDILDVTKSSEELGKTAGKDLVVDKTTYPKLLGLEKAKEFAAELNREA 342

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           K+QL  F+  KAAPL+ LA+YIAYR N
Sbjct: 343 KQQLEGFDSRKAAPLIALADYIAYRDN 369

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>GGPP3_ARATH (Q9LUD9) Geranylgeranyl pyrophosphate synthetase 3, chloroplast|
           precursor (GGPP synthetase 3) (GGPS3) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 360

 Score =  120 bits (301), Expect = 2e-27
 Identities = 61/87 (70%), Positives = 73/87 (83%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           YAR IGLLFQVVDDILDVTKS+EELGKTAGKD+ + K TYP+L+GLE+S+E AEKL  +A
Sbjct: 274 YARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSKEVAEKLRREA 333

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           +EQL  F+  KAAPL+ LA+YIA R N
Sbjct: 334 EEQLLGFDPSKAAPLVALASYIACRHN 360

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>GGPP4_ARATH (Q9SLG2) Geranylgeranyl pyrophosphate synthetase 4 precursor (GGPP|
           synthetase 4) (GGPS4) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 372

 Score =  113 bits (282), Expect = 3e-25
 Identities = 56/87 (64%), Positives = 68/87 (78%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           +AR IGLLFQVVDDILD TKSSEELGKTAGKD  + K TYPK++G+EKS+EF EKL  DA
Sbjct: 286 FARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSKEFVEKLKRDA 345

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           +E L  F+ +K  PL+ L N+IA R +
Sbjct: 346 REHLQGFDSDKVKPLIALTNFIANRNH 372

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>GGPP2_ARATH (O04046) Geranylgeranyl pyrophosphate synthetase 2 precursor (GGPP|
           synthetase 2) (GGPS2) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 376

 Score =  111 bits (277), Expect = 1e-24
 Identities = 56/85 (65%), Positives = 66/85 (77%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           +AR IGLLFQVVDDILD TKSSEELGKTAGKD  + K TYPKL+GLEKS+EF ++L  DA
Sbjct: 290 FARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYPKLIGLEKSKEFVKRLTKDA 349

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYR 235
           ++ L  F  EK APL+ L  +IA R
Sbjct: 350 RQHLQGFSSEKVAPLVALTTFIANR 374

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>GGPP6_ARATH (O22043) Geranylgeranyl pyrophosphate synthetase 6, mitochondrial|
           precursor (GGPP synthetase 6) (GGPS6) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 336

 Score =  110 bits (276), Expect = 2e-24
 Identities = 52/87 (59%), Positives = 70/87 (80%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           YAR +GL+FQV+DD+LD TKSSEELGKTAGKDL + K TYPK++G++ +RE+A++L  +A
Sbjct: 250 YARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREA 309

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           +E L  F+ +K  PLL LA+YI  RQN
Sbjct: 310 QEHLQGFDSDKVVPLLSLADYIVKRQN 336

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>CRTE_CYAPA (P48368) Geranylgeranyl pyrophosphate synthetase homolog (EC|
           2.5.1.29) (GGPP synthetase) (Farnesyltranstransferase)
          Length = 300

 Score = 90.5 bits (223), Expect = 2e-18
 Identities = 42/87 (48%), Positives = 64/87 (73%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           YA++IGL FQ++DD+LD+  + E+LGK+ GKDL + K TYP   G+E+S + AE L+ +A
Sbjct: 215 YAQNIGLAFQIIDDVLDIISTEEKLGKSIGKDLKTQKATYPSFWGVEESIKQAELLVEEA 274

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           KE++ YF+  KA PL+ +A++I  R N
Sbjct: 275 KEEILYFD-NKAIPLIAIADFIVNRNN 300

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>ISPA_ECOLI (P22939) Geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 299

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           YA SIGL FQV DDILDV   +  LGK  G D    K+TYP LLGLE++R+ A  L+ DA
Sbjct: 211 YAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDA 270

Query: 309 KEQLAYFEKEK--AAPLLYLANYIAYR 235
           ++ L    ++    + L  LA+YI  R
Sbjct: 271 RQSLKQLAEQSLDTSALEALADYIIQR 297

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>ISPA_BRAJA (Q45220) Probable geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 332

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           Y+   GL  QV+DDILDVT  +  LGKT GKD A+ K T   ++GL+++R+FA  LL DA
Sbjct: 241 YSACFGLALQVIDDILDVTADTAALGKTPGKDAAAQKPTCASIMGLQEARQFALDLLRDA 300

Query: 309 KEQLAYF--EKEKAAPLLYLANYIAYR 235
            E +A      E+ A L+  AN   ++
Sbjct: 301 GEAIAPLGPRAERLAQLIQRANAYLFK 327

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>ISPA_HAEIN (P45204) Geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 295

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 34/64 (53%), Positives = 43/64 (67%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           YA +IGL FQV DDILD+   S E+GK  G DL  DK+TYPKLLGL  +++ A+ L   A
Sbjct: 211 YAEAIGLAFQVQDDILDIEGDSAEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSA 270

Query: 309 KEQL 298
             +L
Sbjct: 271 LSEL 274

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>ISPA_MICLU (O66126) Geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 291

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 30/62 (48%), Positives = 43/62 (69%)
 Frame = -3

Query: 483 RSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDAKE 304
           +++GL+FQ+ DDILDV  S E +GKT G DL +DK+TY  LLGLE S++     L++  +
Sbjct: 208 KNVGLMFQIKDDILDVEGSFENIGKTVGSDLNNDKSTYVSLLGLEASKQLLNDKLTETYD 267

Query: 303 QL 298
            L
Sbjct: 268 AL 269

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>ISPA_RHISN (P55539) Probable geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 332

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           Y+   GL  QVVDDILD T  +  LGKT GKD A+ K T   ++GL+ +R+FA  LL +A
Sbjct: 241 YSACFGLALQVVDDILDATADTATLGKTPGKDAAAQKPTCASIMGLQAARQFALDLLCEA 300

Query: 309 KEQLAYF--EKEKAAPLLYLANYIAYR 235
            E +A      E+ A +L  A+   ++
Sbjct: 301 GEAIAPLGPRAERLAQMLQRASAYLFK 327

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>ISPA_BACST (Q08291) Geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 297

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 31/87 (35%), Positives = 50/87 (57%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           +A  +GL FQ+ DDILD+  + E++GK  G D +++K TYP LL L  ++E     +  A
Sbjct: 212 FAAHLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSLAGAKEKLAFHIEAA 271

Query: 309 KEQLAYFEKEKAAPLLYLANYIAYRQN 229
           +  L   + + AA L Y+   +A R +
Sbjct: 272 QRHLRNADVDGAA-LAYICELVAARDH 297

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>PREA_SYNY3 (P72580) Prenyl transferase (EC 2.5.1.-)|
          Length = 323

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 30/62 (48%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEK--------SREF 334
           Y + +GL FQ+VDDILD T  +E LGK AG DL S   T P L  +EK         REF
Sbjct: 203 YGKHLGLAFQIVDDILDFTSPTEVLGKPAGSDLISGNITAPALFAMEKYPLLGKLIEREF 262

Query: 333 AE 328
           A+
Sbjct: 263 AQ 264

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>ISPA_BACSU (P54383) Geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 272

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 25/62 (40%), Positives = 40/62 (64%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           ++  IG+ FQ+ DDILD+  S E++GK  G D  +DK+TYP LL LE ++   +  + +A
Sbjct: 211 FSSHIGIGFQIRDDILDLEGSEEKIGKRVGSDTTNDKSTYPSLLSLEGAKHKLDVHIKEA 270

Query: 309 KE 304
            +
Sbjct: 271 ND 272

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>PREA_CYAPA (P31171) Prenyl transferase (EC 2.5.1.-)|
          Length = 323

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 27/51 (52%), Positives = 33/51 (64%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSRE 337
           Y R +GL FQ+VDDILD T S+EELGK +  DL     T P L  LE++ E
Sbjct: 203 YGRHLGLAFQIVDDILDFTSSTEELGKPSCSDLKKGNLTAPVLFALEQNSE 253

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>PREA_CYACA (Q9TLS1) Prenyl transferase (EC 2.5.1.-)|
          Length = 323

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKS--------REF 334
           Y +++GL FQ++DDILD+T SS  LGK    DL     T P L  L K+        REF
Sbjct: 203 YGKNLGLAFQIIDDILDITSSSTALGKMTTSDLKLGNLTAPVLFALTKNSKLFKIIEREF 262

Query: 333 AEKLLSDAKEQLAYFEKEKA 274
            EK  SD  E +   ++  A
Sbjct: 263 CEK--SDISEAINIIKETNA 280

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>ISPB_HAEIN (P44916) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl|
           pyrophosphate synthetase) (OPP synthetase)
          Length = 329

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 25/63 (39%), Positives = 35/63 (55%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           Y R +G  FQ+VDD+LD + +++ LGK  G DLA  K T P L  +         L+ +A
Sbjct: 205 YGRYLGTAFQLVDDVLDYSANTQALGKNVGDDLAEGKPTLPLLHAMRHGNAQQAALIREA 264

Query: 309 KEQ 301
            EQ
Sbjct: 265 IEQ 267

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>IDSA_METTH (O26156) Bifunctional short chain isoprenyl diphosphate synthase|
           [Includes: Farnesyl pyrophosphate synthetase (EC
           2.5.1.1) (FPP synthetase)
           (Dimethylallyltranstransferase); Geranyltranstransferase
           (EC 2.5.1.10)]
          Length = 325

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEK-SREFAEKLLS 316
           Y R IGL FQ+ DD LDV    E LGK  G D+A  K T   +  LE+ S +  E+L+S
Sbjct: 202 YGRCIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALERASEKDRERLIS 260

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>IDSA_METTM (Q53479) Bifunctional short chain isoprenyl diphosphate synthase|
           [Includes: Farnesyl pyrophosphate synthetase (EC
           2.5.1.1) (FPP synthetase)
           (Dimethylallyltranstransferase); Geranyltranstransferase
           (EC 2.5.1.10)]
          Length = 324

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEK-SREFAEKLLS 316
           Y + IGL FQ+ DD LDV    E LGK  G D+A  K T   +  LE+ S E  E+L+S
Sbjct: 201 YGKFIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALEEASEEDRERLIS 259

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>COQ1_NEUCR (Q7S565) Probable hexaprenyl pyrophosphate synthetase,|
           mitochondrial precursor (EC 2.5.1.-) (HPS)
          Length = 449

 Score = 48.9 bits (115), Expect = 7e-06
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKL 361
           Y +++GL FQ+VDD+LD T+S +ELGK AG DL     T P L
Sbjct: 329 YGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLL 371

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>CRTE_RHOCA (P17060) Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)|
           (GGPP synthetase) (Farnesyltranstransferase)
          Length = 289

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 21/56 (37%), Positives = 37/56 (66%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           IG  FQ+ DD+ D   S+E +GK AG+D+A+++    K +G+E +R+  + +L+ A
Sbjct: 200 IGSAFQIADDLKDALMSAEAMGKPAGQDIANERPNAVKTMGIEGARKHLQDVLAGA 255

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>HEPS2_BACST (P55785) Heptaprenyl diphosphate synthase component II (EC|
           2.5.1.30) (HEPPP synthase subunit 2)
          Length = 320

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 22/50 (44%), Positives = 28/50 (56%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSR 340
           +   +G+ FQ+ DDILD T + E+LGK AG DL     T P L  L   R
Sbjct: 199 FGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQGNVTLPVLYALSDER 248

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>COQ1_YARLI (Q6CBH3) Probable hexaprenyl pyrophosphate synthetase,|
           mitochondrial precursor (EC 2.5.1.-) (HPS)
          Length = 452

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 23/56 (41%), Positives = 32/56 (57%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKL 322
           + +++GL FQVVDD+LD ++    LGK AG DL     T P L   EK  E  + +
Sbjct: 332 FGKNLGLCFQVVDDMLDYSEGESHLGKPAGADLKLGLATAPVLFAWEKYPELGDMI 387

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>HEPS2_BACSU (P31114) Heptaprenyl diphosphate synthase component II (EC|
           2.5.1.30) (HEPPP synthase subunit 2) (Spore germination
           protein C3)
          Length = 348

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 14/88 (15%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYP--------------KLLGLEKSR 340
           +G+ +Q++DDILD T + EELGK  G DL     T P              KL+  E ++
Sbjct: 231 VGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPVLYALKNPALKNQLKLINSETTQ 290

Query: 339 EFAEKLLSDAKEQLAYFEKEKAAPLLYL 256
           E  E ++ + K+  A  E   A   +YL
Sbjct: 291 EQLEPIIEEIKKTDA-IEASMAVSEMYL 317

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>DPS1_SCHPO (O43091) Decaprenyl-diphosphate synthase subunit 1 (EC 2.5.1.-)|
           (Decaprenyl pyrophosphate synthetase subunit 1)
          Length = 378

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 23/58 (39%), Positives = 31/58 (53%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLS 316
           Y R IG  FQ++DD+LD T   + LGK AG DL     T P L   +K  E    +++
Sbjct: 258 YGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKYPELGAMIVN 315

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>ISPB_SHIFL (P0AD58) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl|
           pyrophosphate synthetase) (OPP synthetase)
          Length = 323

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 23/63 (36%), Positives = 32/63 (50%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           Y R +G  FQ++DD+LD     E+LGK  G DL   K T P L  +        +++  A
Sbjct: 199 YGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTA 258

Query: 309 KEQ 301
            EQ
Sbjct: 259 IEQ 261

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>ISPB_ECOLI (P0AD57) Octaprenyl-diphosphate synthase (EC 2.5.1.-) (Octaprenyl|
           pyrophosphate synthetase) (OPP synthetase)
          Length = 323

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 23/63 (36%), Positives = 32/63 (50%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           Y R +G  FQ++DD+LD     E+LGK  G DL   K T P L  +        +++  A
Sbjct: 199 YGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTA 258

Query: 309 KEQ 301
            EQ
Sbjct: 259 IEQ 261

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>PREA_PORPU (P51268) Prenyl transferase (EC 2.5.1.-)|
          Length = 323

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLE---KSREFAEKLL 319
           Y + +GL FQ++DD+LD+  S++ LGK +G D  +   T P L  L    K  +  ++  
Sbjct: 203 YGKHMGLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLTAPILFALTQEGKLDQLIQREF 262

Query: 318 SDAKE-QLAYFEKEKA 274
           SD ++  LA F  +K+
Sbjct: 263 SDERDISLALFLIKKS 278

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>COQ1_YEAST (P18900) Hexaprenyl pyrophosphate synthetase, mitochondrial|
           precursor (EC 2.5.1.-) (HPS)
          Length = 473

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 8/63 (12%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKL--------LGLEKSREF 334
           + R++G+ FQ+VDD+LD T S ++LGK +G DL     T P L        LG   SR F
Sbjct: 352 FGRNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPSLGPLISRNF 411

Query: 333 AEK 325
           +E+
Sbjct: 412 SER 414

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>IDSA_METJA (Q58270) Bifunctional short chain isoprenyl diphosphate synthase|
           [Includes: Farnesyl pyrophosphate synthetase (EC
           2.5.1.1) (FPP synthetase)
           (Dimethylallyltranstransferase); Geranyltranstransferase
           (EC 2.5.1.10)]
          Length = 327

 Score = 45.4 bits (106), Expect = 8e-05
 Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 36/121 (29%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTT-----------------YPKL 361
           YA+ IGL FQ+ DD+LD+    ++LGK  G D+   K T                   ++
Sbjct: 205 YAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGKKTIIVIHALKTLDEDKKKRLLEI 264

Query: 360 LG---------------LEKSREFAEKLL----SDAKEQLAYFEKEKAAPLLYLANYIAY 238
           LG               L+ S E+A++L+     +AKE L  F K++   L  LA++I  
Sbjct: 265 LGNKNVKDEEIKEAIEILKPSIEYAKELMKQKTEEAKEYLKIFNKDRRKVLEDLADFIMS 324

Query: 237 R 235
           R
Sbjct: 325 R 325

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>ISPA_BUCAP (Q8K9A0) Geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 294

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 28/78 (35%), Positives = 42/78 (53%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           ++ SIGL FQ+ DDILD+    ++L     K     K TYP L+GL+KS+   ++L  +A
Sbjct: 211 FSVSIGLAFQIQDDILDLKNDIKKLESKRNK----TKNTYPLLIGLKKSKIKIKELYKEA 266

Query: 309 KEQLAYFEKEKAAPLLYL 256
              L   +K     +L L
Sbjct: 267 FFTLEILKKNFNVNILKL 284

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>DPS1_HUMAN (Q5T2R2) Decaprenyl-diphosphate synthase subunit 1 (EC 2.5.1.-)|
           (Decaprenyl pyrophosphate synthetase subunit 1)
           (Trans-prenyltransferase) (TPT)
          Length = 415

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSRE 337
           Y +++G+ FQ++DD+LD T  S+++GK    DL     T P L   ++  E
Sbjct: 295 YGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGLATGPVLFACQQFPE 345

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>DPS1_MOUSE (Q33DR2) Decaprenyl-diphosphate synthase subunit 1 (EC 2.5.1.-)|
           (Decaprenyl pyrophosphate synthetase subunit 1)
           (Solanesyl-diphosphate synthase subunit 1)
           (Trans-prenyltransferase) (TPT)
          Length = 409

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSRE 337
           Y +++G+ FQ++DD+LD T  S+++GK    DL     T P L   ++  E
Sbjct: 289 YGKNVGIAFQLIDDVLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPE 339

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>ISPA_BUCAI (P57537) Geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 282

 Score = 42.4 bits (98), Expect = 7e-04
 Identities = 28/74 (37%), Positives = 43/74 (58%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           ++ SIGL FQ+ DDILD  K S    KT  K +   K TYP ++GL++SR+  ++L   +
Sbjct: 211 FSISIGLAFQIQDDILDFKKDSV---KTDNKKIIK-KHTYPLIIGLDESRKKIKQLHKKS 266

Query: 309 KEQLAYFEKEKAAP 268
              L   +K+ + P
Sbjct: 267 FLALNSLKKKISIP 280

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>GGPS_SULAC (P39464) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)|
           (GGPS) [Includes: Dimethylallyltranstransferase (EC
           2.5.1.1); Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 330

 Score = 42.0 bits (97), Expect = 9e-04
 Identities = 21/60 (35%), Positives = 34/60 (56%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           +  ++G+ FQ+VDDIL +T   +ELGK    D+   K T   +  LE  +E  +K++  A
Sbjct: 204 FGTNLGIAFQIVDDILGLTADEKELGKPVFSDIREGKKTILVIKTLELCKEDEKKIVLKA 263

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>GGPS_SULSO (P95999) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)|
           (GGPS) [Includes: Dimethylallyltranstransferase (EC
           2.5.1.1); Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5.1.29)]
          Length = 332

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLL 319
           Y  ++G+ FQ+VDDIL +    +ELGK    D+   K T   +  L ++ E  +K+L
Sbjct: 206 YGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTILVIKTLSEATEDEKKIL 262

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>GGPPS_MYCTU (P0A5H8) Probable geranylgeranyl pyrophosphate synthetase (GGPP|
           synthetase) (GGPPSase) (Geranylgeranyl diphosphate
           synthase) [Includes: Dimethylallyltranstransferase (EC
           2.5.1.1); Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferas
          Length = 359

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 20/41 (48%), Positives = 23/41 (56%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYP 367
           Y R IGL FQ+VDD+L +    E  GK    DL S K T P
Sbjct: 230 YGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLP 270

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>GGPPS_MYCBO (P0A5H9) Probable geranylgeranyl pyrophosphate synthetase (GGPP|
           synthetase) (GGPPSase) (Geranylgeranyl diphosphate
           synthase) [Includes: Dimethylallyltranstransferase (EC
           2.5.1.1); Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferas
          Length = 359

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 20/41 (48%), Positives = 23/41 (56%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYP 367
           Y R IGL FQ+VDD+L +    E  GK    DL S K T P
Sbjct: 230 YGRHIGLAFQLVDDLLGIWGRPEITGKPVYSDLRSRKKTLP 270

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>GGR_ARATH (Q39108) Geranylgeranyl pyrophosphate synthase-related protein,|
           chloroplast precursor
          Length = 326

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 5/90 (5%)
 Frame = -3

Query: 489 YARSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           Y R++G+L+QVVDDI +  K S + G   G                    E AE+L   A
Sbjct: 249 YGRAVGMLYQVVDDITEDKKKSYDGGAEKG------------------MMEMAEELKEKA 290

Query: 309 KEQLAYFEK-----EKAAPLLYLANYIAYR 235
           K++L  F+      +   PL    +Y A+R
Sbjct: 291 KKELQVFDNKYGGGDTLVPLYTFVDYAAHR 320

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>GGPPS_ASHGO (Q758K0) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)|
           (GGPPSase) (Geranylgeranyl diphosphate synthase)
           [Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5
          Length = 320

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSR 340
           +G+L+QV DD L++T S     K    D+   K +YP + GL+ +R
Sbjct: 201 LGVLYQVRDDYLNLTDSRMSENKGFADDITEGKFSYPIIHGLQYAR 246

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>CRTE_RHOS4 (P54976) Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29)|
           (GGPP synthetase) (Farnesyltranstransferase)
          Length = 288

 Score = 33.5 bits (75), Expect = 0.32
 Identities = 19/56 (33%), Positives = 29/56 (51%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSDA 310
           IG  FQV DD+ D    +E LGK AG+D    +    +  G+E + +  + +L  A
Sbjct: 200 IGEAFQVADDLRDALCDAETLGKPAGQDEIHARPNAVREYGVEGAAKRLKDILGGA 255

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>FPPS2_ARATH (Q43315) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)|
           (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLL 319
           +G+ FQV DD LD     E LGK  G D+   K ++  +  LE+  E   K+L
Sbjct: 224 MGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKALERCSEEQTKIL 275

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>FPPS1_ARATH (Q09152) Farnesyl pyrophosphate synthetase 1, mitochondrial|
           precursor (FPP synthetase 1) (FPS 1) (Farnesyl
           diphosphate synthetase 1) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 384

 Score = 32.7 bits (73), Expect = 0.54
 Identities = 20/53 (37%), Positives = 28/53 (52%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLL 319
           +G+ FQV DD LD     E LGK  G D+   K ++  +  LE+  E   K+L
Sbjct: 266 MGIYFQVQDDYLDCFADPETLGK-IGTDIEDFKCSWLVVKALERCSEEQTKIL 317

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>FPPS1_PARAR (O24241) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)|
           (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSD 313
           +G  FQV DD LD   + E +GK  G D+   K ++  +  LE S E  +K+L +
Sbjct: 224 MGTYFQVQDDYLDCFGAPEVIGK-IGTDIEDFKCSWLVVKALELSNEEQKKILHE 277

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>FPPS1_LUPAL (P49351) Farnesyl pyrophosphate synthetase 1 (FPP synthetase 1)|
           (FPS 1) (Farnesyl diphosphate synthetase 1) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 32.3 bits (72), Expect = 0.71
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSD 313
           +G  FQV DD LD   + E +GK  G D+   K ++  +  LE S +  +K+L D
Sbjct: 224 MGTYFQVQDDYLDCFGAPETIGK-IGTDIEDFKCSWLVVKALELSNDEQKKVLYD 277

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>FPPS2_LUPAL (P49352) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)|
           (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 20/53 (37%), Positives = 29/53 (54%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLL 319
           +G  FQV DD LD   + E +GK  G D+   K ++  +  LE S E  +K+L
Sbjct: 224 MGTYFQVQDDYLDCFGAPETIGK-IGTDIEDFKCSWLVVKALELSNEEQKKVL 275

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>ISPA_AQUAE (O66952) Geranyltranstransferase (EC 2.5.1.10)|
           (Farnesyl-diphosphate synthase) (FPP synthase)
          Length = 262

 Score = 32.0 bits (71), Expect = 0.93
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = -3

Query: 483 RSIGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAE 328
           R +GLLFQ+VDD LD     E+LG+   +++   K  Y +L   E  +E  E
Sbjct: 201 RKVGLLFQMVDDYLDKDGFYEKLGECLKEEI---KKLYEELKEKEIFKESQE 249

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>FPPS2_PARAR (O24242) Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2)|
           (FPS 2) (Farnesyl diphosphate synthetase 2) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 342

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 19/55 (34%), Positives = 30/55 (54%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSD 313
           +G  FQV DD LD   + E +GK  G D+   K ++  +  LE + E  +K+L +
Sbjct: 224 MGTYFQVQDDYLDCFGAPEVIGK-IGTDIEDFKCSWLVVKALELANEEQKKVLHE 277

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>SYE2_THEMA (Q9X2I8) Glutamyl-tRNA synthetase 2 (EC 6.1.1.17) (Glutamate--tRNA|
           ligase 2) (GluRS 2)
          Length = 487

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -3

Query: 402 GKDLASDKTTYPKLLGLEKSREFAEKLLSDAKEQLAYFEKEKAAPLLY 259
           G D+  D   Y +   LE  RE+AEKL+ D +     ++KE  +  L+
Sbjct: 93  GPDIGGDFGPYRQSERLEIYREYAEKLVEDKRAYYVVYDKEDPSKELF 140

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>MTC2_YEAST (P53185) Protein MTC2|
          Length = 909

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +3

Query: 156 SSNPRLDVLTKLQINNEQQNNHHLSSADRQYNWPSTIAVLPSLFQNK-QVAPLHQKATFP 332
           S+N      T +  NN   NN  +S+ +R+ +W  +       +Q + Q+    + +  P
Sbjct: 393 STNTTSTTTTTITNNNNNSNNSSISNNNRKIDWTQS-------YQTRYQIPYWFEDSILP 445

Query: 333 QIPAISPTLVTW 368
            IP IS +L T+
Sbjct: 446 PIPPISKSLFTF 457

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>FPPS_MAIZE (P49353) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 350

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 18/53 (33%), Positives = 29/53 (54%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLL 319
           +G  FQV DD LD     E +GK  G D+   K ++  +  LE++ E  +++L
Sbjct: 232 MGTYFQVQDDYLDCYGDPEFIGK-IGTDIEDYKCSWLVVQALERADESQKRIL 283

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>FPPS_ARTAN (P49350) Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)|
           (Farnesyl diphosphate synthetase) [Includes:
           Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10)]
          Length = 343

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -3

Query: 477 IGLLFQVVDDILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSREFAEKLLSD 313
           +G  FQV DD LD   + E +GK  G D+   K ++  +  LE   E  +K L +
Sbjct: 225 MGTYFQVQDDYLDCFGAPEVIGK-IGTDIEDFKCSWLVVKALELPNEEQKKTLHE 278

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>MSP1_PLAFK (P04932) Merozoite surface protein 1 precursor (Merozoite surface|
            antigens) (PMMSA) (P190)
          Length = 1630

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = -3

Query: 393  LASDKTTYPKLLGLEKSREFAEKLLSDA----KEQLAYFEKEKA 274
            L  +K  Y +L+G + S  F EK+L D+     E    F K KA
Sbjct: 923  LGKNKNIYQELIGQKSSENFYEKILKDSDTFYNESFTNFVKSKA 966

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>DLEC1_RAT (Q68FQ8) Deleted in lung and esophageal cancer protein 1 homolog|
          Length = 465

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/55 (29%), Positives = 24/55 (43%)
 Frame = +3

Query: 165 PRLDVLTKLQINNEQQNNHHLSSADRQYNWPSTIAVLPSLFQNKQVAPLHQKATF 329
           P +  + +  I+NE    HHL S +  YN P      P     +   P++ K TF
Sbjct: 185 PPVKTVFRWCIDNELMQKHHLISTEDYYNDPLPFCPAP----KRSPTPMYSKMTF 235

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>MSP1_PLAFW (P04933) Merozoite surface protein 1 precursor (Merozoite surface|
            antigens) (PMMSA) (P195)
          Length = 1639

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
 Frame = -3

Query: 393  LASDKTTYPKLLGLEKSREFAEKLLSDA----KEQLAYFEKEKA 274
            L  +K  Y +L+G + S  F EK+L D+     E    F K KA
Sbjct: 932  LGKNKNIYQELIGQKSSENFYEKILKDSDTFYNESFTNFVKSKA 975

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>NUON_BUCBP (Q89AT4) NADH-quinone oxidoreductase chain N (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain N) (NDH-1, chain N)
          Length = 494

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = -2

Query: 259 LGQLYCLSAELR*--WLFCCSLLICNFVRTSSLGFEEYLNSSSHIY*FSFLPMCHENI*V 86
           LG+ Y +S  ++   WLF     IC F+ ++ +GF  YL   S ++       CH+NI +
Sbjct: 398 LGKFYLMSLVVKEHMWLF-----ICLFIISTIIGFCAYLKIISCLFVAPSDSYCHKNIII 452

Query: 85  TN 80
           ++
Sbjct: 453 SS 454

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>FLPA_METTH (O27283) Fibrillarin-like pre-rRNA-processing protein|
          Length = 224

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -3

Query: 366 KLLGLEKSREFAEKLLSDAKEQLAYFEKEKAAPLLY 259
           +LLG+ +SR+    LL DA   L+Y    +AA L+Y
Sbjct: 108 ELLGVCESRKNMAPLLEDASRPLSYLRMVEAADLVY 143


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,490,952
Number of Sequences: 219361
Number of extensions: 1344234
Number of successful extensions: 3351
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 3275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3348
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result