Clone Name	rbart25c04
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT009461.1| Triticum aestivum clone wr1.pk0001.a2:fis, full i...	844	0.0
2	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	260	4e-66
3	dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic D...	260	4e-66
4	dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic D...	260	4e-66
5	dbj|AK120768.1| Oryza sativa (japonica cultivar-group) cDNA clon...	260	4e-66
6	dbj|AK121529.1| Oryza sativa (japonica cultivar-group) cDNA clon...	224	2e-55
7	ref|XM_478880.1| Oryza sativa (japonica cultivar-group), mRNA	222	8e-55
8	gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome...	149	1e-32
9	gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome...	149	1e-32
10	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	149	1e-32
11	dbj|AB205047.1| Chrysanthemum x morifolium GGPS mRNA for geranyl...	72	2e-09
12	gb|AY661706.1| Adonis palaestina geranylgeranyl diphosphate synt...	64	5e-07
13	emb|AJ973134.1| Andrographis paniculata partial ggps gene for pu...	58	3e-05
14	gb|DQ432013.1| Stevia rebaudiana geranylgeranyl diphosphate synt...	56	1e-04
15	dbj|AB027706.1| Daucus carota mRNA for GGPP synthase, complete cds	56	1e-04
16	emb|CR936324.2| Medicago truncatula chromosome 5 clone mth2-62a2...	54	4e-04
17	gb|AY661707.1| Adonis palaestina geranylgeranyl diphosphate synt...	52	0.002
18	gb|DQ418482.1| Zingiber officinale geranylgeranyl diphosphate sy...	50	0.007
19	gb|DQ192185.1| Daucus carota subsp. sativus putative geranylgera...	48	0.027
20	emb|AL607023.3| Human DNA sequence from clone RP11-65E10 on chro...	46	0.11
21	emb|X80267.1|CAGERDIS C.annuum gene for geranyl-diphosphate synt...	46	0.11
22	dbj|AB034249.1| Croton sublyratus mRNA for geranylgeranyl pyroph...	46	0.11
23	dbj|AB028667.1| Gentiana lutea GENGGPS mRNA for geranylgeranyl p...	46	0.11
24	ref|NM_113869.1| Arabidopsis thaliana unknown protein AT3G29430 ...	44	0.43
25	ref|NM_112315.2| Arabidopsis thaliana GGPS3 (GERANYLGERANYL PYRO...	44	0.43
26	ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Ozsa851...	44	0.43
27	gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete s...	44	0.43
28	gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete se...	44	0.43
29	gb|DQ056612.1| Arabidopsis thaliana putative geranylgeranyl pyro...	44	0.43
30	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	44	0.43
31	dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic D...	44	0.43
32	dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	44	0.43
33	dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosome 3, ...	44	0.43
34	dbj|AK117933.1| Arabidopsis thaliana At3g14550 mRNA for putative...	44	0.43
35	dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.43
36	dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clon...	44	0.43
37	gb|U44877.1|ATU44877 Arabidopsis thaliana geranylgeranyl pyropho...	44	0.43
38	gb|DQ192184.1| Daucus carota subsp. sativus putative geranylgera...	44	0.43
39	dbj|AB027705.1| Daucus carota mRNA for GGPP synthase, complete cds	44	0.43
40	gb|AC138611.4| Mus musculus BAC clone RP23-41P19 from chromosome...	42	1.7
41	gb|AC127570.4| Mus musculus BAC clone RP24-225D13 from chromosom...	42	1.7
42	gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, comple...	42	1.7
43	gb|AC125408.3| Mus musculus BAC clone RP23-94M23 from 3, complet...	42	1.7
44	emb|AL589904.2| Human DNA sequence from clone RP11-115B7 on chro...	42	1.7
45	gb|CP000316.1| Polaromonas sp. JS666, complete genome	42	1.7
46	emb|AJ617819.1| Nannospalax ehrenbergi partial cryab gene for Hs...	42	1.7
47	dbj|AB055496.1| Hevea brasiliensis ggps mRNA for geranylgeranyl ...	42	1.7
48	gb|AF503923.1| Spalax judaei alpha-B-crystallin gene, partial cds	42	1.7
49	gb|AF503922.1| Spalax galili alpha-B-crystallin gene, partial cds	42	1.7
50	gb|AY086932.1| Arabidopsis thaliana clone 29678 mRNA, complete s...	42	1.7
51	emb|BX088590.7| Pig DNA sequence from clone XX-591C4, complete s...	42	1.7
52	emb|X92893.1|CRGGPPS C.roseus GGPP synthase gene	42	1.7
53	emb|X98795.1|SAGGPS S.alba mRNA for geranylgeranyl-pyrophosphate...	42	1.7
54	emb|AJ427968.1|SGA427968 Spalax galili gene for alpha-B-crystall...	42	1.7
55	gb|AC102363.19| Mus musculus chromosome 1, clone RP23-76B18, com...	42	1.7
56	dbj|AB055653.1| Lactuca indica var. laciniata LivlGGPPS mRNA for...	42	1.7
57	dbj|AB034250.1| Scoparia dulcis mRNA for geranylgeranyl pyrophos...	42	1.7
58	gb|AY661708.1| Adonis palaestina geranylgeranyl diphosphate synt...	40	6.6
59	ref|NM_128557.2| Arabidopsis thaliana catalytic/ protein phospha...	40	6.6
60	gb|AC116768.9| Mus musculus chromosome 8, clone RP23-395P10, com...	40	6.6
61	gb|AC130551.4| Mus musculus BAC clone RP24-538J2 from chromosome...	40	6.6
62	emb|CR450804.7| Zebrafish DNA sequence from clone CH211-275D22 i...	40	6.6
63	emb|AJ294529.1|CDI294529 Clostridium difficile ermB gene, ORF3 a...	40	6.6
64	gb|AC004680.3| Arabidopsis thaliana chromosome 2 clone F23F1 map...	40	6.6
65	gb|AC163706.2| Gallus gallus BAC clone CH261-71A16 from chromoso...	40	6.6
66	ref|XM_689081.1| PREDICTED: Danio rerio similar to FCH domain on...	40	6.6
67	gb|AC158774.6| Mus musculus chromosome 18, clone RP23-427N16, co...	40	6.6
68	gb|AF370594.1|AF370594 Arabidopsis thaliana putative protein pho...	40	6.6
69	emb|BX819166.1|CNS0A8S1 Arabidopsis thaliana Full-length cDNA Co...	40	6.6
70	gb|AC118019.11| Mus musculus chromosome 8, clone RP23-458N4, com...	40	6.6
71	gb|AC009964.11| Homo sapiens BAC clone RP11-387G23 from 2, compl...	40	6.6
72	gb|AC078940.4| Homo sapiens BAC clone RP11-144B8 from 2, complet...	40	6.6
73	gb|U18931.1|CPU18931 Clostridium perfringens 23S rRNA methylase ...	40	6.6
74	emb|CT010476.10| Mouse DNA sequence from clone RP23-339L19 on ch...	40	6.6
75	gb|AC137584.4| Mus musculus BAC clone RP23-351O20 from 9, comple...	40	6.6

---

>gb|BT009461.1| Triticum aestivum clone wr1.pk0001.a2:fis, full insert mRNA
           sequence
          Length = 680

 Score =  844 bits (426), Expect = 0.0
 Identities = 474/490 (96%)
 Strand = Plus / Minus

                                                                       
Query: 2   gacataaagcctgattcccattataatgtcttggctatctcaatgggacattggtatttg 61
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 gacataaaggctgattcccattataatgtcttggctatctcaatgggacattggtatttg 595

                                                                       
Query: 62  ccacctaactcatgtggcatttgtcacctaaatattctcatgacacatcggtagaaaact 121
           |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 594 ccacctaactcatgtggcttttgtcacctaaatattctcatgacacaacggtagaaaact 535

                                                                       
Query: 122 aaactagtatatatgagaggaagaattcagatattcctcaaatcccagacttgatgttct 181
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aaactagtatatatgaggggaagaattcagatattcctcaaatcccagacttgatgttct 475

                                                                       
Query: 182 tacaaagttacagatcaacaacgaacaacagaataaccatcaccttagttctgccgatag 241
           ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 474 tacaaagttacagataaacaacaaacaacagaataaccatcaccttagttctgccgatag 415

                                                                       
Query: 242 gcaatataattggccaagtacaatagcggtgctgccttctctttttcaaaataagcaagt 301
           |||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 414 gcaatataattggccaagtacaatagcggtgctgccttctctttatcaaaatcagcaagt 355

                                                                       
Query: 302 tgctcctttgcatcagaaagcaacttttccgcaaattcccgcgatttctccaaccctagt 361
           |||||||||||||||||||||||||| |||||||||||| | || |||||||||||||||
Sbjct: 354 tgctcctttgcatcagaaagcaacttctccgcaaattcctgtgacttctccaaccctagt 295

                                                                       
Query: 362 aacttggggtatgtcgtcttgtcactcgccaagtccttcccagctgtcttccctagctcc 421
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aacttcgggtatgtcgtcttgtcactcgccaagtccttcccagctgtcttccctagctcc 235

                                                                       
Query: 422 tctgatgacttggtgacatcaagaatgtcatcaaccacctggaacagcaacccaattgat 481
           |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 234 tctgatgacttggtcacatcaagaatgtcatcaaccacctggaacagcagcccaattgat 175

                     
Query: 482 ctggcgtact 491
           || |||||||
Sbjct: 174 ctcgcgtact 165

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  260 bits (131), Expect = 4e-66
 Identities = 275/323 (85%)
 Strand = Plus / Plus

                                                                            
Query: 145      aattcagatattcctcaaatcccagacttgatgttcttacaaagttacagatcaacaacg 204
                |||||||||||||||||||||  |  ||| |||  |||||||||||||| ||||||||  
Sbjct: 23454049 aattcagatattcctcaaatctgaatcttaatgagcttacaaagttacaaatcaacaata 23454108

                                                                            
Query: 205      aacaacagaataaccatcaccttagttctgccgataggcaatataattggccaagtacaa 264
                | |||  || || ||||||||| |||||||||||||||||||||||||||||| || || 
Sbjct: 23454109 atcaatggagtacccatcacctcagttctgccgataggcaatataattggccaggtgcag 23454168

                                                                            
Query: 265      tagcggtgctgccttctctttttcaaaataagcaagttgctcctttgcatcagaaagcaa 324
                 || ||||||||  ||||||  |||||    | |||||| ||| ||||||||||||||||
Sbjct: 23454169 aagtggtgctgcggtctcttgatcaaatcctgaaagttgttcccttgcatcagaaagcaa 23454228

                                                                            
Query: 325      cttttccgcaaattcccgcgatttctccaaccctagtaacttggggtatgtcgtcttgtc 384
                |||||| ||||| ||||| |||||||||| ||| ||||| || |||||||||||||||||
Sbjct: 23454229 cttttctgcaaactcccgtgatttctccagcccaagtaatttcgggtatgtcgtcttgtc 23454288

                                                                            
Query: 385      actcgccaagtccttcccagctgtcttccctagctcctctgatgacttggtgacatcaag 444
                |||||||||||||||||| |||||||| || |||||||| || |||||||| ||||||||
Sbjct: 23454289 actcgccaagtccttccctgctgtcttgccgagctcctcagaagacttggtcacatcaag 23454348

                                       
Query: 445      aatgtcatcaaccacctggaaca 467
                 || |||||||| ||||||||||
Sbjct: 23454349 tatatcatcaacaacctggaaca 23454371

---

>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1301_C12
          Length = 128396

 Score =  260 bits (131), Expect = 4e-66
 Identities = 275/323 (85%)
 Strand = Plus / Plus

                                                                         
Query: 145   aattcagatattcctcaaatcccagacttgatgttcttacaaagttacagatcaacaacg 204
             |||||||||||||||||||||  |  ||| |||  |||||||||||||| ||||||||  
Sbjct: 14442 aattcagatattcctcaaatctgaatcttaatgagcttacaaagttacaaatcaacaata 14501

                                                                         
Query: 205   aacaacagaataaccatcaccttagttctgccgataggcaatataattggccaagtacaa 264
             | |||  || || ||||||||| |||||||||||||||||||||||||||||| || || 
Sbjct: 14502 atcaatggagtacccatcacctcagttctgccgataggcaatataattggccaggtgcag 14561

                                                                         
Query: 265   tagcggtgctgccttctctttttcaaaataagcaagttgctcctttgcatcagaaagcaa 324
              || ||||||||  ||||||  |||||    | |||||| ||| ||||||||||||||||
Sbjct: 14562 aagtggtgctgcggtctcttgatcaaatcctgaaagttgttcccttgcatcagaaagcaa 14621

                                                                         
Query: 325   cttttccgcaaattcccgcgatttctccaaccctagtaacttggggtatgtcgtcttgtc 384
             |||||| ||||| ||||| |||||||||| ||| ||||| || |||||||||||||||||
Sbjct: 14622 cttttctgcaaactcccgtgatttctccagcccaagtaatttcgggtatgtcgtcttgtc 14681

                                                                         
Query: 385   actcgccaagtccttcccagctgtcttccctagctcctctgatgacttggtgacatcaag 444
             |||||||||||||||||| |||||||| || |||||||| || |||||||| ||||||||
Sbjct: 14682 actcgccaagtccttccctgctgtcttgccgagctcctcagaagacttggtcacatcaag 14741

                                    
Query: 445   aatgtcatcaaccacctggaaca 467
              || |||||||| ||||||||||
Sbjct: 14742 tatatcatcaacaacctggaaca 14764

---

>dbj|AP004276.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453G03
          Length = 144480

 Score =  260 bits (131), Expect = 4e-66
 Identities = 275/323 (85%)
 Strand = Plus / Plus

                                                                         
Query: 145   aattcagatattcctcaaatcccagacttgatgttcttacaaagttacagatcaacaacg 204
             |||||||||||||||||||||  |  ||| |||  |||||||||||||| ||||||||  
Sbjct: 73946 aattcagatattcctcaaatctgaatcttaatgagcttacaaagttacaaatcaacaata 74005

                                                                         
Query: 205   aacaacagaataaccatcaccttagttctgccgataggcaatataattggccaagtacaa 264
             | |||  || || ||||||||| |||||||||||||||||||||||||||||| || || 
Sbjct: 74006 atcaatggagtacccatcacctcagttctgccgataggcaatataattggccaggtgcag 74065

                                                                         
Query: 265   tagcggtgctgccttctctttttcaaaataagcaagttgctcctttgcatcagaaagcaa 324
              || ||||||||  ||||||  |||||    | |||||| ||| ||||||||||||||||
Sbjct: 74066 aagtggtgctgcggtctcttgatcaaatcctgaaagttgttcccttgcatcagaaagcaa 74125

                                                                         
Query: 325   cttttccgcaaattcccgcgatttctccaaccctagtaacttggggtatgtcgtcttgtc 384
             |||||| ||||| ||||| |||||||||| ||| ||||| || |||||||||||||||||
Sbjct: 74126 cttttctgcaaactcccgtgatttctccagcccaagtaatttcgggtatgtcgtcttgtc 74185

                                                                         
Query: 385   actcgccaagtccttcccagctgtcttccctagctcctctgatgacttggtgacatcaag 444
             |||||||||||||||||| |||||||| || |||||||| || |||||||| ||||||||
Sbjct: 74186 actcgccaagtccttccctgctgtcttgccgagctcctcagaagacttggtcacatcaag 74245

                                    
Query: 445   aatgtcatcaaccacctggaaca 467
              || |||||||| ||||||||||
Sbjct: 74246 tatatcatcaacaacctggaaca 74268

---

>dbj|AK120768.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007O22, full
            insert sequence
          Length = 1541

 Score =  260 bits (131), Expect = 4e-66
 Identities = 275/323 (85%)
 Strand = Plus / Minus

                                                                        
Query: 145  aattcagatattcctcaaatcccagacttgatgttcttacaaagttacagatcaacaacg 204
            |||||||||||||||||||||  |  ||| |||  |||||||||||||| ||||||||  
Sbjct: 1355 aattcagatattcctcaaatctgaatcttaatgagcttacaaagttacaaatcaacaata 1296

                                                                        
Query: 205  aacaacagaataaccatcaccttagttctgccgataggcaatataattggccaagtacaa 264
            | |||  || || ||||||||| |||||||||||||||||||||||||||||| || || 
Sbjct: 1295 atcaatggagtacccatcacctcagttctgccgataggcaatataattggccaggtgcag 1236

                                                                        
Query: 265  tagcggtgctgccttctctttttcaaaataagcaagttgctcctttgcatcagaaagcaa 324
             || ||||||||  ||||||  |||||    | |||||| ||| ||||||||||||||||
Sbjct: 1235 aagtggtgctgcggtctcttgatcaaatcctgaaagttgttcccttgcatcagaaagcaa 1176

                                                                        
Query: 325  cttttccgcaaattcccgcgatttctccaaccctagtaacttggggtatgtcgtcttgtc 384
            |||||| ||||| ||||| |||||||||| ||| ||||| || |||||||||||||||||
Sbjct: 1175 cttttctgcaaactcccgtgatttctccagcccaagtaatttcgggtatgtcgtcttgtc 1116

                                                                        
Query: 385  actcgccaagtccttcccagctgtcttccctagctcctctgatgacttggtgacatcaag 444
            |||||||||||||||||| |||||||| || |||||||| || |||||||| ||||||||
Sbjct: 1115 actcgccaagtccttccctgctgtcttgccgagctcctcagaagacttggtcacatcaag 1056

                                   
Query: 445  aatgtcatcaaccacctggaaca 467
             || |||||||| ||||||||||
Sbjct: 1055 tatatcatcaacaacctggaaca 1033

---

>dbj|AK121529.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030K23, full
            insert sequence
          Length = 1778

 Score =  224 bits (113), Expect = 2e-55
 Identities = 212/245 (86%)
 Strand = Plus / Minus

                                                                        
Query: 223  accttagttctgccgataggcaatataattggccaagtacaatagcggtgctgccttctc 282
            |||| |||||||||||||||||||||||||||||| || ||  || ||||||||  ||||
Sbjct: 1279 acctcagttctgccgataggcaatataattggccaggtgcagaagtggtgctgcggtctc 1220

                                                                        
Query: 283  tttttcaaaataagcaagttgctcctttgcatcagaaagcaacttttccgcaaattcccg 342
            ||  |||||    | |||||| ||| |||||||||||||||||||||| ||||| |||||
Sbjct: 1219 ttgatcaaatcctgaaagttgttcccttgcatcagaaagcaacttttctgcaaactcccg 1160

                                                                        
Query: 343  cgatttctccaaccctagtaacttggggtatgtcgtcttgtcactcgccaagtccttccc 402
             |||||||||| ||| ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 1159 tgatttctccagcccaagtaatttcgggtatgtcgtcttgtcactcgccaagtccttccc 1100

                                                                        
Query: 403  agctgtcttccctagctcctctgatgacttggtgacatcaagaatgtcatcaaccacctg 462
             |||||||| || |||||||| || |||||||| |||||||| || |||||||| |||||
Sbjct: 1099 tgctgtcttgccgagctcctcagaagacttggtcacatcaagtatatcatcaacaacctg 1040

                 
Query: 463  gaaca 467
            |||||
Sbjct: 1039 gaaca 1035

---

>ref|XM_478880.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1101

 Score =  222 bits (112), Expect = 8e-55
 Identities = 208/240 (86%)
 Strand = Plus / Minus

                                                                        
Query: 228  agttctgccgataggcaatataattggccaagtacaatagcggtgctgccttctcttttt 287
            |||||||||||||||||||||||||||||| || ||  || ||||||||  ||||||  |
Sbjct: 1099 agttctgccgataggcaatataattggccaggtgcagaagtggtgctgcggtctcttgat 1040

                                                                        
Query: 288  caaaataagcaagttgctcctttgcatcagaaagcaacttttccgcaaattcccgcgatt 347
            ||||    | |||||| ||| |||||||||||||||||||||| ||||| ||||| ||||
Sbjct: 1039 caaatcctgaaagttgttcccttgcatcagaaagcaacttttctgcaaactcccgtgatt 980

                                                                        
Query: 348  tctccaaccctagtaacttggggtatgtcgtcttgtcactcgccaagtccttcccagctg 407
            |||||| ||| ||||| || ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 979  tctccagcccaagtaatttcgggtatgtcgtcttgtcactcgccaagtccttccctgctg 920

                                                                        
Query: 408  tcttccctagctcctctgatgacttggtgacatcaagaatgtcatcaaccacctggaaca 467
            |||| || |||||||| || |||||||| |||||||| || |||||||| ||||||||||
Sbjct: 919  tcttgccgagctcctcagaagacttggtcacatcaagtatatcatcaacaacctggaaca 860

---

>gb|AC136223.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0093E24,
              complete sequence
          Length = 146492

 Score =  149 bits (75), Expect = 1e-32
 Identities = 138/159 (86%)
 Strand = Plus / Plus

                                                                          
Query: 298    aagttgctcctttgcatcagaaagcaacttttccgcaaattcccgcgatttctccaaccc 357
              |||||| ||| |||||||||||||||||||||| |||||  |||| |||||||||| |||
Sbjct: 126607 aagttgttcccttgcatcagaaagcaacttttctgcaaacccccgtgatttctccagccc 126666

                                                                          
Query: 358    tagtaacttggggtatgtcgtcttgtcactcgccaagtccttcccagctgtcttccctag 417
               ||||| || ||||||||||||||||||||||||||||||| ||| |||||||| || | 
Sbjct: 126667 aagtaatttcgggtatgtcgtcttgtcactcgccaagtcctcccctgctgtcttgccaac 126726

                                                     
Query: 418    ctcctctgatgacttggtgacatcaagaatgtcatcaac 456
              |||||| || |||||||| |||||||  || ||||||||
Sbjct: 126727 ctcctcagaagacttggtcacatcaattatatcatcaac 126765



 Score =  147 bits (74), Expect = 4e-32
 Identities = 205/247 (82%), Gaps = 5/247 (2%)
 Strand = Plus / Plus

                                                                          
Query: 215    taaccatcaccttagttctgccgata--ggcaatataattggccaagtacaatagcggtg 272
              |||||||||||| ||||||| |||||  || |||||||||||||| ||  |  || ||||
Sbjct: 127674 taaccatcacctcagttctgtcgatataggtaatataattggccaggtgtagaagtggtg 127733

                                                                          
Query: 273    ctgccttctctttttcaaaat---aagcaagttgctcctttgcatcagaaagcaactttt 329
              ||||||||||||  |||||     ||  |||||| ||| |||||||||||||||||||||
Sbjct: 127734 ctgccttctcttgatcaaatcctgaaaaaagttgttcccttgcatcagaaagcaactttt 127793

                                                                          
Query: 330    ccgcaaattcccgcgatttctccaaccctagtaacttggggtatgtcgtcttgtcactcg 389
              | |||||  |||| |||||||| | ||| ||||| || |||||| |||||||||||||||
Sbjct: 127794 ctgcaaacccccgtgatttctctagcccaagtaattttgggtatatcgtcttgtcactcg 127853

                                                                          
Query: 390    ccaagtccttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgt 449
              ||||||||||||| |||||||| || ||||| || || ||| |||| |||||||| || |
Sbjct: 127854 ccaagtccttccccgctgtcttgccaagctcgtcagaagacatggtcacatcaagtatat 127913

                     
Query: 450    catcaac 456
              |||||||
Sbjct: 127914 catcaac 127920



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                         
Query: 215    taaccatcaccttagttctgccgataggcaatataattggcca 257
              ||||||||||||  ||| || ||||||||||||||||||||||
Sbjct: 126521 taaccatcacctcggttttgtcgataggcaatataattggcca 126563



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    aattcagatattcctcaaat 164
              ||||||||||||||||||||
Sbjct: 126444 aattcagatattcctcaaat 126463

---

>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
            OJ1384_A02, complete sequence
          Length = 100251

 Score =  149 bits (75), Expect = 1e-32
 Identities = 138/159 (86%)
 Strand = Plus / Plus

                                                                        
Query: 298  aagttgctcctttgcatcagaaagcaacttttccgcaaattcccgcgatttctccaaccc 357
            |||||| ||| |||||||||||||||||||||| |||||  |||| |||||||||| |||
Sbjct: 874  aagttgttcccttgcatcagaaagcaacttttctgcaaacccccgtgatttctccagccc 933

                                                                        
Query: 358  tagtaacttggggtatgtcgtcttgtcactcgccaagtccttcccagctgtcttccctag 417
             ||||| || ||||||||||||||||||||||||||||||| ||| |||||||| || | 
Sbjct: 934  aagtaatttcgggtatgtcgtcttgtcactcgccaagtcctcccctgctgtcttgccaac 993

                                                   
Query: 418  ctcctctgatgacttggtgacatcaagaatgtcatcaac 456
            |||||| || |||||||| |||||||  || ||||||||
Sbjct: 994  ctcctcagaagacttggtcacatcaattatatcatcaac 1032



 Score =  147 bits (74), Expect = 4e-32
 Identities = 205/247 (82%), Gaps = 5/247 (2%)
 Strand = Plus / Plus

                                                                        
Query: 215  taaccatcaccttagttctgccgata--ggcaatataattggccaagtacaatagcggtg 272
            |||||||||||| ||||||| |||||  || |||||||||||||| ||  |  || ||||
Sbjct: 1941 taaccatcacctcagttctgtcgatataggtaatataattggccaggtgtagaagtggtg 2000

                                                                        
Query: 273  ctgccttctctttttcaaaat---aagcaagttgctcctttgcatcagaaagcaactttt 329
            ||||||||||||  |||||     ||  |||||| ||| |||||||||||||||||||||
Sbjct: 2001 ctgccttctcttgatcaaatcctgaaaaaagttgttcccttgcatcagaaagcaactttt 2060

                                                                        
Query: 330  ccgcaaattcccgcgatttctccaaccctagtaacttggggtatgtcgtcttgtcactcg 389
            | |||||  |||| |||||||| | ||| ||||| || |||||| |||||||||||||||
Sbjct: 2061 ctgcaaacccccgtgatttctctagcccaagtaattttgggtatatcgtcttgtcactcg 2120

                                                                        
Query: 390  ccaagtccttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgt 449
            ||||||||||||| |||||||| || ||||| || || ||| |||| |||||||| || |
Sbjct: 2121 ccaagtccttccccgctgtcttgccaagctcgtcagaagacatggtcacatcaagtatat 2180

                   
Query: 450  catcaac 456
            |||||||
Sbjct: 2181 catcaac 2187



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 215 taaccatcaccttagttctgccgataggcaatataattggcca 257
           ||||||||||||  ||| || ||||||||||||||||||||||
Sbjct: 788 taaccatcacctcggttttgtcgataggcaatataattggcca 830



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 145 aattcagatattcctcaaat 164
           ||||||||||||||||||||
Sbjct: 711 aattcagatattcctcaaat 730

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  149 bits (75), Expect = 1e-32
 Identities = 138/159 (86%)
 Strand = Plus / Plus

                                                                           
Query: 298     aagttgctcctttgcatcagaaagcaacttttccgcaaattcccgcgatttctccaaccc 357
               |||||| ||| |||||||||||||||||||||| |||||  |||| |||||||||| |||
Sbjct: 8204386 aagttgttcccttgcatcagaaagcaacttttctgcaaacccccgtgatttctccagccc 8204445

                                                                           
Query: 358     tagtaacttggggtatgtcgtcttgtcactcgccaagtccttcccagctgtcttccctag 417
                ||||| || ||||||||||||||||||||||||||||||| ||| |||||||| || | 
Sbjct: 8204446 aagtaatttcgggtatgtcgtcttgtcactcgccaagtcctcccctgctgtcttgccaac 8204505

                                                      
Query: 418     ctcctctgatgacttggtgacatcaagaatgtcatcaac 456
               |||||| || |||||||| |||||||  || ||||||||
Sbjct: 8204506 ctcctcagaagacttggtcacatcaattatatcatcaac 8204544



 Score =  147 bits (74), Expect = 4e-32
 Identities = 205/247 (82%), Gaps = 5/247 (2%)
 Strand = Plus / Plus

                                                                           
Query: 215     taaccatcaccttagttctgccgata--ggcaatataattggccaagtacaatagcggtg 272
               |||||||||||| ||||||| |||||  || |||||||||||||| ||  |  || ||||
Sbjct: 8205453 taaccatcacctcagttctgtcgatataggtaatataattggccaggtgtagaagtggtg 8205512

                                                                           
Query: 273     ctgccttctctttttcaaaat---aagcaagttgctcctttgcatcagaaagcaactttt 329
               ||||||||||||  |||||     ||  |||||| ||| |||||||||||||||||||||
Sbjct: 8205513 ctgccttctcttgatcaaatcctgaaaaaagttgttcccttgcatcagaaagcaactttt 8205572

                                                                           
Query: 330     ccgcaaattcccgcgatttctccaaccctagtaacttggggtatgtcgtcttgtcactcg 389
               | |||||  |||| |||||||| | ||| ||||| || |||||| |||||||||||||||
Sbjct: 8205573 ctgcaaacccccgtgatttctctagcccaagtaattttgggtatatcgtcttgtcactcg 8205632

                                                                           
Query: 390     ccaagtccttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgt 449
               ||||||||||||| |||||||| || ||||| || || ||| |||| |||||||| || |
Sbjct: 8205633 ccaagtccttccccgctgtcttgccaagctcgtcagaagacatggtcacatcaagtatat 8205692

                      
Query: 450     catcaac 456
               |||||||
Sbjct: 8205693 catcaac 8205699



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 215     taaccatcaccttagttctgccgataggcaatataattggcca 257
               ||||||||||||  ||| || ||||||||||||||||||||||
Sbjct: 8204300 taaccatcacctcggttttgtcgataggcaatataattggcca 8204342



 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 145     aattcagatattcctcaaat 164
               ||||||||||||||||||||
Sbjct: 8204223 aattcagatattcctcaaat 8204242

---

>dbj|AB205047.1| Chrysanthemum x morifolium GGPS mRNA for geranylgeranyl pyrophosphate
            synthase, complete cds
          Length = 1305

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 123/152 (80%)
 Strand = Plus / Minus

                                                                        
Query: 332  gcaaattcccgcgatttctccaaccctagtaacttggggtatgtcgtcttgtcactcgcc 391
            |||||||| ||||||||||| | ||| |  |||||||| || |||||||| |||  | ||
Sbjct: 1107 gcaaattcgcgcgatttctcaatccccaacaacttgggatacgtcgtcttatcagccacc 1048

                                                                        
Query: 392  aagtccttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgtca 451
            |  || || ||||| || ||||| | |||||| || || || || |||||||| ||||||
Sbjct: 1047 agatctttaccagcagttttccccaactcctcagaagatttcgtcacatcaagtatgtca 988

                                            
Query: 452  tcaaccacctggaacagcaacccaattgatct 483
            ||||| ||||| |||| |||||||||||||||
Sbjct: 987  tcaacaacctgaaacaacaacccaattgatct 956

---

>gb|AY661706.1| Adonis palaestina geranylgeranyl diphosphate synthase (Ggps1) mRNA,
           complete cds
          Length = 1349

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                       
Query: 390 ccaagtccttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgt 449
           |||| ||||| ||||| ||||| || | ||| || || ||| |||| ||||||||||| |
Sbjct: 985 ccaaatcctttccagcagtcttacccaactcttcggacgacatggtaacatcaagaatat 926

                                       
Query: 450 catcaaccacctggaacagcaacccaat 477
           |||||||||| ||||||| |||||||||
Sbjct: 925 catcaaccacttggaacaacaacccaat 898

---

>emb|AJ973134.1| Andrographis paniculata partial ggps gene for putative
           geranylgerannylpyrophosphate synthase, exon 1, locus 1
          Length = 421

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 421 ctctgatgacttggtgacatcaagaatgtcatcaaccacctggaa 465
           |||||||||||| || |||||||| |||||||| |||||||||||
Sbjct: 415 ctctgatgactttgtcacatcaagtatgtcatccaccacctggaa 371

---

>gb|DQ432013.1| Stevia rebaudiana geranylgeranyl diphosphate synthase mRNA,
           complete cds
          Length = 1264

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 428 gacttggtgacatcaagaatgtcatcaaccacctggaacagcaacccaattgatct 483
           ||||| |||||||||||||| ||||| |||||||| |||| ||| ||||| |||||
Sbjct: 921 gactttgtgacatcaagaatatcatctaccacctgaaacaacaaaccaatcgatct 866

---

>dbj|AB027706.1| Daucus carota mRNA for GGPP synthase, complete cds
          Length = 1316

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                       
Query: 398 ttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgtcatcaacc 457
           ||||| ||||||||||| |||||| | ||||| ||||| ||||| | ||| |||||||||
Sbjct: 945 ttcccggctgtcttcccgagctccgcagatgatttggtaacatctaaaatatcatcaacc 886

                               
Query: 458 acctggaacagcaacccaat 477
           || || |||| ||| |||||
Sbjct: 885 acttgaaacaacaatccaat 866

---

>emb|CR936324.2| Medicago truncatula chromosome 5 clone mth2-62a22, COMPLETE SEQUENCE
          Length = 121881

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 398   ttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgtcatcaac 456
             |||||||| || |||||||  ||||| ||||| || || ||||||||||||||||||||
Sbjct: 67967 ttcccagcagttttccctaattcctcagatgatttagtaacatcaagaatgtcatcaac 68025

---

>gb|AY661707.1| Adonis palaestina geranylgeranyl diphosphate synthase (Ggps2) mRNA,
           partial cds
          Length = 1159

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                         
Query: 432 tggtgacatcaagaatgtcatcaaccacctggaacagcaacccaat 477
           |||| ||||| ||||| ||||||||||| ||||||| |||||||||
Sbjct: 729 tggtaacatcgagaatatcatcaaccacttggaacaacaacccaat 684

---

>gb|DQ418482.1| Zingiber officinale geranylgeranyl diphosphate synthase mRNA,
           partial cds
          Length = 339

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 79/97 (81%)
 Strand = Plus / Minus

                                                                       
Query: 395 tccttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgtcatca 454
           |||||||| || ||||| || |||||||| ||||||||||| || || || ||||| || 
Sbjct: 170 tccttccctgccgtctttcccagctcctccgatgacttggtcacgtcgaggatgtcgtcg 111

                                                
Query: 455 accacctggaacagcaacccaattgatctggcgtact 491
           || || |||||||| |  ||||| || ||||||||||
Sbjct: 110 actacttggaacagtaggccaatggacctggcgtact 74

---

>gb|DQ192185.1| Daucus carota subsp. sativus putative geranylgeranyl pyrophosphate
           synthase (GGPS2) mRNA, complete cds
          Length = 1271

 Score = 48.1 bits (24), Expect = 0.027
 Identities = 66/80 (82%)
 Strand = Plus / Minus

                                                                       
Query: 398 ttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgtcatcaacc 457
           ||||| || |||||||| |||||| | ||||||||||| ||||| | ||| ||||| |||
Sbjct: 945 ttcccggccgtcttccccagctccgcagatgacttggtaacatccaaaatatcatccacc 886

                               
Query: 458 acctggaacagcaacccaat 477
           || || |||| ||| |||||
Sbjct: 885 acttgaaacaacaatccaat 866

---

>emb|AL607023.3| Human DNA sequence from clone RP11-65E10 on chromosome 10 Contains part
              of the gene for alpha-catenin-like protein (MGC26194)
              (VR22), complete sequence
          Length = 132396

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 202    acgaacaacagaataaccatcac 224
              |||||||||||||||||||||||
Sbjct: 106592 acgaacaacagaataaccatcac 106614

---

>emb|X80267.1|CAGERDIS C.annuum gene for geranyl-diphosphate synthase
          Length = 1428

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 398  ttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgtcatcaac 456
            |||||||| || || || ||||||||||| ||||| || || ||||| |||||||||||
Sbjct: 1086 ttcccagcagtttttccgagctcctctgacgacttcgtcacgtcaagtatgtcatcaac 1028

---

>dbj|AB034249.1| Croton sublyratus mRNA for geranylgeranyl pyrophosphate synthase,
           complete cds
          Length = 1107

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 431 ttggtgacatcaagaatgtcatcaaccacctggaacagcaacccaat 477
           ||||| ||||||||||| ||||| || ||||| |||| |||||||||
Sbjct: 902 ttggtcacatcaagaatatcatccactacctgaaacaacaacccaat 856

---

>dbj|AB028667.1| Gentiana lutea GENGGPS mRNA for geranylgeranyl pyrophosphate
           synthase, complete cds
          Length = 1482

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 437 acatcaagaatgtcatcaaccac 459
           |||||||||||||||||||||||
Sbjct: 980 acatcaagaatgtcatcaaccac 958

---

>ref|NM_113869.1| Arabidopsis thaliana unknown protein AT3G29430 mRNA, complete cds
          Length = 1333

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 440 tcaagaatgtcatcaaccacctggaacagcaacccaat 477
           |||||||| |||||||||||||| |||| || ||||||
Sbjct: 931 tcaagaatatcatcaaccacctgaaacaacagcccaat 894

---

>ref|NM_112315.2| Arabidopsis thaliana GGPS3 (GERANYLGERANYL PYROPHOSPHATE SYNTHASE
           3); farnesyltranstransferase AT3G14550 (GGPS3) mRNA,
           complete cds
          Length = 1308

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 443 agaatgtcatcaaccacctggaacag 468
           |||||||||||||||||||| |||||
Sbjct: 903 agaatgtcatcaaccacctgaaacag 878

---

>ref|NM_188086.1| Oryza sativa (japonica cultivar-group), Ozsa8518 predicted mRNA
          Length = 2715

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 135  tgagaggaagaattcagatatt 156
            ||||||||||||||||||||||
Sbjct: 1689 tgagaggaagaattcagatatt 1710

---

>gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete sequence
          Length = 145073

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                         
Query: 398   ttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgtcatcaacc 457
             |||||||| || ||||||| ||| | ||| || || || ||||||||||| |||||||| 
Sbjct: 55816 ttcccagcagttttccctaactcttgtgaagatttcgtcacatcaagaatatcatcaaca 55757

                       
Query: 458   acctggaaca 467
             ||||| ||||
Sbjct: 55756 acctgaaaca 55747

---

>gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete sequence
          Length = 142205

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                         
Query: 398   ttcccagctgtcttccctagctcctctgatgacttggtgacatcaagaatgtcatcaacc 457
             |||||||| || ||||||| ||| | ||| || || || ||||||||||| |||||||| 
Sbjct: 86390 ttcccagcagttttccctaactcttgtgaagatttcgtcacatcaagaatatcatcaaca 86449

                       
Query: 458   acctggaaca 467
             ||||| ||||
Sbjct: 86450 acctgaaaca 86459

---

>gb|DQ056612.1| Arabidopsis thaliana putative geranylgeranyl pyrophosphate synthase
           (At3g29430) mRNA, complete cds
          Length = 1074

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 440 tcaagaatgtcatcaaccacctggaacagcaacccaat 477
           |||||||| |||||||||||||| |||| || ||||||
Sbjct: 860 tcaagaatatcatcaaccacctgaaacaacagcccaat 823

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 135     tgagaggaagaattcagatatt 156
               ||||||||||||||||||||||
Sbjct: 9633331 tgagaggaagaattcagatatt 9633310

---

>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0038F12
          Length = 190014

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 135   tgagaggaagaattcagatatt 156
             ||||||||||||||||||||||
Sbjct: 71334 tgagaggaagaattcagatatt 71313

---

>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10
          Length = 77589

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 440   tcaagaatgtcatcaaccacctggaacagcaacccaat 477
             |||||||| |||||||||||||| |||| || ||||||
Sbjct: 62031 tcaagaatatcatcaaccacctgaaacaacagcccaat 61994

---

>dbj|AB023038.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIE1
          Length = 84462

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 443   agaatgtcatcaaccacctggaacag 468
             |||||||||||||||||||| |||||
Sbjct: 12931 agaatgtcatcaaccacctgaaacag 12956

---

>dbj|AK117933.1| Arabidopsis thaliana At3g14550 mRNA for putative geranylgeranyl
           pyrophosphate synthase (GGPS3), complete cds, clone:
           RAFL19-12-M11
          Length = 1326

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 443 agaatgtcatcaaccacctggaacag 468
           |||||||||||||||||||| |||||
Sbjct: 903 agaatgtcatcaaccacctgaaacag 878

---

>dbj|AK121307.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111L20, full
            insert sequence
          Length = 3027

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 135  tgagaggaagaattcagatatt 156
            ||||||||||||||||||||||
Sbjct: 1837 tgagaggaagaattcagatatt 1858

---

>dbj|AK064813.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E08, full
            insert sequence
          Length = 3047

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 135  tgagaggaagaattcagatatt 156
            ||||||||||||||||||||||
Sbjct: 1847 tgagaggaagaattcagatatt 1868

---

>gb|U44877.1|ATU44877 Arabidopsis thaliana geranylgeranyl pyrophosphate synthase (GGPS3)
           mRNA, partial cds
          Length = 836

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 443 agaatgtcatcaaccacctggaacag 468
           |||||||||||||||||||| |||||
Sbjct: 452 agaatgtcatcaaccacctgaaacag 427

---

>gb|DQ192184.1| Daucus carota subsp. sativus putative geranylgeranyl pyrophosphate
           synthase (GGPS1) mRNA, complete cds
          Length = 1287

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 428 gacttggtgacatcaagaatgtcatcaaccacctggaacagcaacccaat 477
           ||||| |||||||||||||| |||||||| || || |||| ||| |||||
Sbjct: 977 gactttgtgacatcaagaatatcatcaactacttgaaacaacaatccaat 928

---

>dbj|AB027705.1| Daucus carota mRNA for GGPP synthase, complete cds
          Length = 1324

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                             
Query: 428 gacttggtgacatcaagaatgtcatcaaccacctggaacagcaacccaat 477
           ||||| |||||||||||||| |||||||| || || |||| ||| |||||
Sbjct: 982 gactttgtgacatcaagaatatcatcaactacttgaaacaacaatccaat 933

---

>gb|AC138611.4| Mus musculus BAC clone RP23-41P19 from chromosome 18, complete sequence
          Length = 246348

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     gacataaagcctgattcccat 22
             |||||||||||||||||||||
Sbjct: 67114 gacataaagcctgattcccat 67134

---

>gb|AC127570.4| Mus musculus BAC clone RP24-225D13 from chromosome 18, complete sequence
          Length = 187220

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 2      gacataaagcctgattcccat 22
              |||||||||||||||||||||
Sbjct: 184989 gacataaagcctgattcccat 185009

---

>gb|AC122254.4| Mus musculus BAC clone RP23-171M24 from 3, complete sequence
          Length = 198281

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    atgtcttggctatctcaatgg 47
             |||||||||||||||||||||
Sbjct: 67306 atgtcttggctatctcaatgg 67326

---

>gb|AC125408.3| Mus musculus BAC clone RP23-94M23 from 3, complete sequence
          Length = 210519

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    atgtcttggctatctcaatgg 47
             |||||||||||||||||||||
Sbjct: 41272 atgtcttggctatctcaatgg 41252

---

>emb|AL589904.2| Human DNA sequence from clone RP11-115B7 on chromosome 6, complete
             sequence
          Length = 67797

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 395   tccttcccagctgtcttccct 415
             |||||||||||||||||||||
Sbjct: 16554 tccttcccagctgtcttccct 16574

---

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 433     ggtgacatcaagaatgtcatcaaccacctggaa 465
               ||||||||| || |||||||| |||||||||||
Sbjct: 1806287 ggtgacatccaggatgtcatccaccacctggaa 1806255

---

>emb|AJ617819.1| Nannospalax ehrenbergi partial cryab gene for HspB5 protein and
           partial mkbp gene for HspB2 protein
          Length = 1258

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 402 cagctgtcttccctagctcctctga 426
           ||||||||||||| |||||||||||
Sbjct: 962 cagctgtcttcccaagctcctctga 986

---

>dbj|AB055496.1| Hevea brasiliensis ggps mRNA for geranylgeranyl diphosphate synthase,
            complete cds
          Length = 1450

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 437  acatcaagaatgtcatcaaccacctggaacagcaacccaat 477
            ||||||||||| || ||||| || ||||||| |||||||||
Sbjct: 1041 acatcaagaatatcgtcaacaacttggaacaacaacccaat 1001

---

>gb|AF503923.1| Spalax judaei alpha-B-crystallin gene, partial cds
          Length = 976

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 402 cagctgtcttccctagctcctctga 426
           ||||||||||||| |||||||||||
Sbjct: 159 cagctgtcttcccaagctcctctga 135

---

>gb|AF503922.1| Spalax galili alpha-B-crystallin gene, partial cds
          Length = 976

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 402 cagctgtcttccctagctcctctga 426
           ||||||||||||| |||||||||||
Sbjct: 159 cagctgtcttcccaagctcctctga 135

---

>gb|AY086932.1| Arabidopsis thaliana clone 29678 mRNA, complete sequence
          Length = 1311

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 444 gaatgtcatcaaccacctggaacag 468
           ||||||||||||||||||| |||||
Sbjct: 903 gaatgtcatcaaccacctgaaacag 879

---

>emb|BX088590.7| Pig DNA sequence from clone XX-591C4, complete sequence
          Length = 165790

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 206   acaacagaataaccatcaccttagttctg 234
             |||||||||  ||||||||||||||||||
Sbjct: 39920 acaacagaaataccatcaccttagttctg 39892

---

>emb|X92893.1|CRGGPPS C.roseus GGPP synthase gene
          Length = 1271

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 437 acatcaagaatgtcatcaaccacctggaacagcaacccaat 477
           ||||||||||| ||||| || ||||| |||| |||||||||
Sbjct: 930 acatcaagaatatcatctacaacctgaaacaacaacccaat 890

---

>emb|X98795.1|SAGGPS S.alba mRNA for geranylgeranyl-pyrophosphate synthase
          Length = 1394

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 449 tcatcaaccacctggaacagcaacccaat 477
           |||||||||||||| |||| |||||||||
Sbjct: 982 tcatcaaccacctgaaacaacaacccaat 954

---

>emb|AJ427968.1|SGA427968 Spalax galili gene for alpha-B-crystallin, 5'UTR
          Length = 946

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 402 cagctgtcttccctagctcctctga 426
           ||||||||||||| |||||||||||
Sbjct: 159 cagctgtcttcccaagctcctctga 135

---

>gb|AC102363.19| Mus musculus chromosome 1, clone RP23-76B18, complete sequence
          Length = 210317

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 271    tgctgccttctctttttcaaa 291
              |||||||||||||||||||||
Sbjct: 174971 tgctgccttctctttttcaaa 174991

---

>dbj|AB055653.1| Lactuca indica var. laciniata LivlGGPPS mRNA for putative GGPP
           synthase, partial cds
          Length = 727

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 419 tcctctgatgacttggtgacatcaagaatgtcatcaaccacctggaaca 467
           ||||| || ||||| || ||||||||||| ||||| |||||||| ||||
Sbjct: 426 tcctccgacgactttgtcacatcaagaatatcatccaccacctgaaaca 378

---

>dbj|AB034250.1| Scoparia dulcis mRNA for geranylgeranyl pyrophosphate synthase,
           complete cds
          Length = 1057

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 437 acatcaagaatgtcatcaaccacctggaacagcaacccaat 477
           ||||||||||| ||||| |||||||| |||| || ||||||
Sbjct: 845 acatcaagaatatcatccaccacctgaaacaacagcccaat 805

---

>gb|AY661708.1| Adonis palaestina geranylgeranyl diphosphate synthase (Ggps3) mRNA,
           complete cds
          Length = 1211

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 419 tcctctgatgacttggtgacatcaagaatgtcatcaaccacctggaacagcaaccc 474
           ||||| || |||||||||||||| |  || ||||| ||||| ||||||| ||||||
Sbjct: 929 tcctcagaagacttggtgacatctaagatatcatccaccacttggaacaacaaccc 874

---

>ref|NM_128557.2| Arabidopsis thaliana catalytic/ protein phosphatase type 2C/
           protein serine/threonine phosphatase AT2G30020 mRNA,
           complete cds
          Length = 1375

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 aacagaataaccatcacctt 227
           ||||||||||||||||||||
Sbjct: 426 aacagaataaccatcacctt 407

---

>gb|AC116768.9| Mus musculus chromosome 8, clone RP23-395P10, complete sequence
          Length = 191757

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    attcagatattcctcaaatc 165
              ||||||||||||||||||||
Sbjct: 176280 attcagatattcctcaaatc 176261

---

>gb|AC130551.4| Mus musculus BAC clone RP24-538J2 from chromosome 9, complete sequence
          Length = 189707

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   atttctccaaccctagtaac 364
             ||||||||||||||||||||
Sbjct: 12780 atttctccaaccctagtaac 12799

---

>emb|CR450804.7| Zebrafish DNA sequence from clone CH211-275D22 in linkage group 8,
             complete sequence
          Length = 91038

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   cagatattcctcaaatccca 168
             ||||||||||||||||||||
Sbjct: 68631 cagatattcctcaaatccca 68650

---

>emb|AJ294529.1|CDI294529 Clostridium difficile ermB gene, ORF3 and ORF298
          Length = 2833

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 279  tctctttttcaaaataagca 298
            ||||||||||||||||||||
Sbjct: 1480 tctctttttcaaaataagca 1499

---

>gb|AC004680.3| Arabidopsis thaliana chromosome 2 clone F23F1 map m283, complete
             sequence
          Length = 88543

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 208   aacagaataaccatcacctt 227
             ||||||||||||||||||||
Sbjct: 26326 aacagaataaccatcacctt 26345

---

>gb|AC163706.2| Gallus gallus BAC clone CH261-71A16 from chromosome w, complete
             sequence
          Length = 206206

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   gaacaacagaataaccatca 223
             ||||||||||||||||||||
Sbjct: 68537 gaacaacagaataaccatca 68556

---

>ref|XM_689081.1| PREDICTED: Danio rerio similar to FCH domain only 1 (LOC565812),
           mRNA
          Length = 3480

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 149 cagatattcctcaaatccca 168
           ||||||||||||||||||||
Sbjct: 822 cagatattcctcaaatccca 803

---

>gb|AC158774.6| Mus musculus chromosome 18, clone RP23-427N16, complete sequence
          Length = 207351

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 169    gacttgatgttcttacaaag 188
              ||||||||||||||||||||
Sbjct: 151581 gacttgatgttcttacaaag 151562

---

>gb|AF370594.1|AF370594 Arabidopsis thaliana putative protein phosphatase 2C (At2g30020;
           F23F1.6) mRNA, complete cds
          Length = 1191

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 aacagaataaccatcacctt 227
           ||||||||||||||||||||
Sbjct: 426 aacagaataaccatcacctt 407

---

>emb|BX819166.1|CNS0A8S1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB53ZC09 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1342

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 aacagaataaccatcacctt 227
           ||||||||||||||||||||
Sbjct: 422 aacagaataaccatcacctt 403

---

>gb|AC118019.11| Mus musculus chromosome 8, clone RP23-458N4, complete sequence
          Length = 185749

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 146    attcagatattcctcaaatc 165
              ||||||||||||||||||||
Sbjct: 173772 attcagatattcctcaaatc 173791

---

>gb|AC009964.11| Homo sapiens BAC clone RP11-387G23 from 2, complete sequence
          Length = 197087

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    gtgctgccttctctttttca 289
              ||||||||||||||||||||
Sbjct: 119950 gtgctgccttctctttttca 119969

---

>gb|AC078940.4| Homo sapiens BAC clone RP11-144B8 from 2, complete sequence
          Length = 166315

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 279   tctctttttcaaaataagcaagttgctc 306
             |||||||||||||||| | |||||||||
Sbjct: 72307 tctctttttcaaaataggaaagttgctc 72280

---

>gb|U18931.1|CPU18931 Clostridium perfringens 23S rRNA methylase ErmBP (ermBP) gene,
            complete cds, and flanking DR1 and DR2 repeats
          Length = 4129

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 279  tctctttttcaaaataagca 298
            ||||||||||||||||||||
Sbjct: 2662 tctctttttcaaaataagca 2681

---

>emb|CT010476.10| Mouse DNA sequence from clone RP23-339L19 on chromosome 12, complete
              sequence
          Length = 235489

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 391    caagtccttcccagctgtct 410
              ||||||||||||||||||||
Sbjct: 168095 caagtccttcccagctgtct 168076

---

>gb|AC137584.4| Mus musculus BAC clone RP23-351O20 from 9, complete sequence
          Length = 197108

 Score = 40.1 bits (20), Expect = 6.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 345    atttctccaaccctagtaac 364
              ||||||||||||||||||||
Sbjct: 169742 atttctccaaccctagtaac 169761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,663,372
Number of Sequences: 3902068
Number of extensions: 4663372
Number of successful extensions: 87767
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87528
Number of HSP's gapped (non-prelim): 224
length of query: 491
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 469
effective length of database: 17,147,199,772
effective search space: 8042036693068
effective search space used: 8042036693068
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---