ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_464533.1| Oryza sativa (japonica cultivar-group), mRNA 70 6e-09
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
3dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
4gb|AC011072.9| Drosophila melanogaster clone BACR48A20, complete... 46 0.089
5gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51... 46 0.089
6gb|AC149630.3| Rhinolophus ferrumequinum clone VMRC7-251C10, com... 44 0.35
7gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 gen... 44 0.35
8gb|AC150241.3| Rhinolophus ferrumequinum clone VMRC7-311G24, com... 44 0.35
9dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
10gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 44 0.35
11gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
12gb|AC004896.1| Homo sapiens PAC clone RP4-811H12 from 7, complet... 42 1.4
13gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, comple... 42 1.4
14gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome 42 1.4
15ref|XM_476777.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
16gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
17gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 geno... 40 5.5
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
19emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 i... 40 5.5
20gb|AY253266.1| Thlaspi arvense 2 AGAMOUS-like protein gene, puta... 40 5.5
21gb|AY253254.1| Thlaspi arvense 1 AGAMOUS-like protein gene, puta... 40 5.5
22emb|AL513462.1|NCB8L3 Neurospora crassa DNA linkage group V BAC ... 40 5.5
23emb|BX664716.19| Zebrafish DNA sequence from clone DKEY-3D4 in l... 40 5.5
24emb|BX248236.16| Zebrafish DNA sequence from clone CH211-207B24 ... 40 5.5
25gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosom... 40 5.5
26dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
29dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.5
30dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
31dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
32dbj|AK108598.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
33dbj|AK072410.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
34dbj|AK065761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
35emb|AL935316.7| Zebrafish DNA sequence from clone CH211-239C9 in... 40 5.5
36gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
37emb|AL954133.5| Zebrafish DNA sequence from clone CH211-222H22, ... 40 5.5
38gb|AC024069.29| Mus musculus BAC Clone 402k12 RPCI-23, complete ... 40 5.5
39gb|AC024915.24| Mus musculus C57CL/6J RPCI-23, complete sequence 40 5.5

>ref|XM_464533.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1353

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 121  gcctcaaggacttggcaatggaggacgcggtttttggcccggctgcggccg 171
            ||||| |||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 1349 gcctcgaggacttggcaatggaggacgcggttcttggcgcggccgcggccg 1299



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 254  cggcggcgacgtcgacgaccaacacgctcatgtcgtt 290
            |||||||||||||||||||  | ||||||||||||||
Sbjct: 1219 cggcggcgacgtcgacgacggagacgctcatgtcgtt 1183



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                  
Query: 121     gcctcaaggacttggcaatggaggacgcggtttttggcccggctgcggccg 171
               ||||| |||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 5755375 gcctcgaggacttggcaatggaggacgcggttcttggcgcggccgcggccg 5755425



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 254     cggcggcgacgtcgacgaccaacacgctcatgtcgtt 290
               |||||||||||||||||||  | ||||||||||||||
Sbjct: 5755505 cggcggcgacgtcgacgacggagacgctcatgtcgtt 5755541



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 161      ggctgcggccggcaatgctt 180
                ||||||||||||||||||||
Sbjct: 25219329 ggctgcggccggcaatgctt 25219310



to top

>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1135_F06
          Length = 102230

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 121   gcctcaaggacttggcaatggaggacgcggtttttggcccggctgcggccg 171
             ||||| |||||||||||||||||||||||||| ||||| |||| |||||||
Sbjct: 44889 gcctcgaggacttggcaatggaggacgcggttcttggcgcggccgcggccg 44939



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 254   cggcggcgacgtcgacgaccaacacgctcatgtcgtt 290
             |||||||||||||||||||  | ||||||||||||||
Sbjct: 45019 cggcggcgacgtcgacgacggagacgctcatgtcgtt 45055



to top

>gb|AC011072.9| Drosophila melanogaster clone BACR48A20, complete sequence
          Length = 166178

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 257   cggcgacgtcgacgaccaacacgctca 283
             ||||||||||||||||| |||||||||
Sbjct: 95657 cggcgacgtcgacgacccacacgctca 95683



to top

>gb|AE003799.4| Drosophila melanogaster chromosome 2R, section 51 of 73 of the complete
              sequence
          Length = 316981

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 257    cggcgacgtcgacgaccaacacgctca 283
              ||||||||||||||||| |||||||||
Sbjct: 100036 cggcgacgtcgacgacccacacgctca 100062



to top

>gb|AC149630.3| Rhinolophus ferrumequinum clone VMRC7-251C10, complete sequence
          Length = 163389

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 198    gaagctctttatctgtcctttg 219
              ||||||||||||||||||||||
Sbjct: 143122 gaagctctttatctgtcctttg 143101



to top

>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
              sequence
          Length = 165394

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 42     ccgttacaatgtacggacatgtttgctagt 71
              ||||||||||| |||||||||||| |||||
Sbjct: 105538 ccgttacaatgcacggacatgtttactagt 105567



to top

>gb|AC150241.3| Rhinolophus ferrumequinum clone VMRC7-311G24, complete sequence
          Length = 174113

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 198   gaagctctttatctgtcctttg 219
             ||||||||||||||||||||||
Sbjct: 68606 gaagctctttatctgtcctttg 68585



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 42       ccgttacaatgtacggacatgtttgctagt 71
                ||||||||||| |||||||||||| |||||
Sbjct: 19477672 ccgttacaatgcacggacatgtttactagt 19477701



to top

>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 198    gaagctctttatctgtcctttg 219
              ||||||||||||||||||||||
Sbjct: 997377 gaagctctttatctgtcctttg 997356



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 198    gaagctctttatctgtcctttg 219
              ||||||||||||||||||||||
Sbjct: 390340 gaagctctttatctgtcctttg 390319



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 42       ccgttacaatgtacggacatgtttgctagt 71
                ||||||||||| |||||||||||| |||||
Sbjct: 19488948 ccgttacaatgcacggacatgtttactagt 19488977



to top

>gb|AC004896.1| Homo sapiens PAC clone RP4-811H12 from 7, complete sequence
          Length = 162215

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    gctctttatctgtcctttgcc 221
              |||||||||||||||||||||
Sbjct: 136887 gctctttatctgtcctttgcc 136867



to top

>gb|AC129177.3| Mus musculus BAC clone RP23-175A22 from 3, complete sequence
          Length = 229072

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 16    gtgtgtatgtgaagtaaaaaa 36
             |||||||||||||||||||||
Sbjct: 81006 gtgtgtatgtgaagtaaaaaa 81026



to top

>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome
          Length = 5411809

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 34      aaataaatccgttacaatgta 54
               |||||||||||||||||||||
Sbjct: 2907010 aaataaatccgttacaatgta 2907030



to top

>ref|XM_476777.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 447

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 254 cggcggcgacgtcgacgacc 273
           ||||||||||||||||||||
Sbjct: 109 cggcggcgacgtcgacgacc 90



to top

>gb|AC146938.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0062O09 map near S6115, complete sequence
          Length = 148654

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    agtgtgtatgtgaagtaaaa 34
             ||||||||||||||||||||
Sbjct: 39229 agtgtgtatgtgaagtaaaa 39248



to top

>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete
             sequence
          Length = 163712

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   cggcggcgacgtcgacgacc 273
             ||||||||||||||||||||
Sbjct: 59204 cggcggcgacgtcgacgacc 59223



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 254      cggcggcgacgtcgacgacc 273
                ||||||||||||||||||||
Sbjct: 29712173 cggcggcgacgtcgacgacc 29712154



to top

>emb|BX663608.26| Zebrafish DNA sequence from clone DKEY-223I19 in linkage group 7,
              complete sequence
          Length = 190528

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     taagagtgtgtatgtgaagt 30
              ||||||||||||||||||||
Sbjct: 130685 taagagtgtgtatgtgaagt 130666



to top

>gb|AY253266.1| Thlaspi arvense 2 AGAMOUS-like protein gene, putative regulatory
            intron and partial cds
          Length = 2966

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   atgtgaagtaaaaaataaat 41
            ||||||||||||||||||||
Sbjct: 2734 atgtgaagtaaaaaataaat 2715



to top

>gb|AY253254.1| Thlaspi arvense 1 AGAMOUS-like protein gene, putative regulatory
            intron and partial cds
          Length = 2991

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 22   atgtgaagtaaaaaataaat 41
            ||||||||||||||||||||
Sbjct: 2759 atgtgaagtaaaaaataaat 2740



to top

>emb|AL513462.1|NCB8L3 Neurospora crassa DNA linkage group V BAC contig B8L3
          Length = 112716

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   caacacgctcatgtcgtttc 292
             ||||||||||||||||||||
Sbjct: 46209 caacacgctcatgtcgtttc 46228



to top

>emb|BX664716.19| Zebrafish DNA sequence from clone DKEY-3D4 in linkage group 9, complete
              sequence
          Length = 198430

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     taagagtgtgtatgtgaagt 30
              ||||||||||||||||||||
Sbjct: 190708 taagagtgtgtatgtgaagt 190689



to top

>emb|BX248236.16| Zebrafish DNA sequence from clone CH211-207B24 in linkage group 3,
             complete sequence
          Length = 228572

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    agagtgtgtatgtgaagtaa 32
             ||||||||||||||||||||
Sbjct: 39147 agagtgtgtatgtgaagtaa 39166



to top

>gb|AC154190.2| Mus musculus BAC clone RP24-465P16 from chromosome 16, complete
             sequence
          Length = 150894

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    tgtgtatgtgaagtaaaaaa 36
             ||||||||||||||||||||
Sbjct: 96574 tgtgtatgtgaagtaaaaaa 96593



to top

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 15       agtgtgtatgtgaagtaaaa 34
                ||||||||||||||||||||
Sbjct: 12600606 agtgtgtatgtgaagtaaaa 12600587



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 254     cggcggcgacgtcgacgacc 273
               ||||||||||||||||||||
Sbjct: 3856036 cggcggcgacgtcgacgacc 3856055



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 254      cggcggcgacgtcgacgacc 273
                ||||||||||||||||||||
Sbjct: 29803595 cggcggcgacgtcgacgacc 29803576



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 248     ctgccccggcggcgacgtcgacga 271
               |||| |||||||||||||||||||
Sbjct: 2820362 ctgctccggcggcgacgtcgacga 2820339



to top

>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496D04
          Length = 197358

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 254   cggcggcgacgtcgacgacc 273
             ||||||||||||||||||||
Sbjct: 95148 cggcggcgacgtcgacgacc 95167



to top

>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1469H02
          Length = 136602

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 161    ggctgcggccggcaatgctt 180
              ||||||||||||||||||||
Sbjct: 119722 ggctgcggccggcaatgctt 119703



to top

>dbj|AK108598.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-E04, full
            insert sequence
          Length = 1660

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ggctgcggccggcaatgctt 180
            ||||||||||||||||||||
Sbjct: 1429 ggctgcggccggcaatgctt 1448



to top

>dbj|AK072410.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083A20, full
            insert sequence
          Length = 2655

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 161  ggctgcggccggcaatgctt 180
            ||||||||||||||||||||
Sbjct: 1324 ggctgcggccggcaatgctt 1343



to top

>dbj|AK065761.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040O19, full
            insert sequence
          Length = 2757

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 254  cggcggcgacgtcgacgacc 273
            ||||||||||||||||||||
Sbjct: 1035 cggcggcgacgtcgacgacc 1016



to top

>emb|AL935316.7| Zebrafish DNA sequence from clone CH211-239C9 in linkage group 3,
             complete sequence
          Length = 174887

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    agagtgtgtatgtgaagtaa 32
             ||||||||||||||||||||
Sbjct: 80946 agagtgtgtatgtgaagtaa 80927



to top

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 15       agtgtgtatgtgaagtaaaa 34
                ||||||||||||||||||||
Sbjct: 12679913 agtgtgtatgtgaagtaaaa 12679894



to top

>emb|AL954133.5| Zebrafish DNA sequence from clone CH211-222H22, complete sequence
          Length = 206373

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     atgtgaagtaaaaaataaat 41
              ||||||||||||||||||||
Sbjct: 139279 atgtgaagtaaaaaataaat 139260



to top

>gb|AC024069.29| Mus musculus BAC Clone 402k12 RPCI-23, complete sequence
          Length = 242808

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tatcttaagagtgtgtatgt 25
             ||||||||||||||||||||
Sbjct: 32438 tatcttaagagtgtgtatgt 32419



to top

>gb|AC024915.24| Mus musculus C57CL/6J RPCI-23, complete sequence
          Length = 225646

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     tatcttaagagtgtgtatgt 25
             ||||||||||||||||||||
Sbjct: 32438 tatcttaagagtgtgtatgt 32419


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,712,596
Number of Sequences: 3902068
Number of extensions: 3712596
Number of successful extensions: 66580
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65966
Number of HSP's gapped (non-prelim): 614
length of query: 408
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 386
effective length of database: 17,147,199,772
effective search space: 6618819111992
effective search space used: 6618819111992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top