ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25b08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_189425.1| Oryza sativa (japonica cultivar-group), predic... 149 9e-33
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
3dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic D... 149 9e-33
4ref|NM_189423.1| Oryza sativa (japonica cultivar-group), predic... 139 9e-30
5ref|NM_189426.1| Oryza sativa (japonica cultivar-group), predic... 133 6e-28
6dbj|AK122054.1| Oryza sativa (japonica cultivar-group) cDNA clon... 133 6e-28
7gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
8gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromos... 101 2e-18
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
10dbj|AB021175.1| Zea mays ZmRCP1 mRNA for root cap protein 1, com... 86 1e-13
11gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 gen... 80 7e-12
12dbj|AB108421.1| Oryza sativa (japonica cultivar-group) transposo... 80 7e-12
13dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
14gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
15gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
16gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosom... 72 2e-09
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
18dbj|AK106826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
20gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome... 68 3e-08
21ref|NM_189428.1| Oryza sativa (japonica cultivar-group), predic... 64 4e-07
22ref|XM_472395.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
23emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4,... 56 1e-04
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
25dbj|AK108077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
26ref|XM_477688.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
28dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
29dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
30ref|XM_477696.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.006
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
32dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
33dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
34emb|AL392185.10| Human DNA sequence from clone RP11-332M4 on chr... 42 1.6
35emb|AL031686.2|HS981L23 Human DNA sequence from clone RP5-981L23... 42 1.6
36emb|AL844864.6| Mouse DNA sequence from clone RP23-360L8 on chro... 42 1.6
37gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section ... 40 6.2
38emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.2
39emb|AL670999.4| Mouse DNA sequence from clone RP23-168F16 on chr... 40 6.2
40emb|CR352264.6| Mouse DNA sequence from clone RP23-344N9 on chro... 40 6.2
41gb|AC126613.6| Homo sapiens 12 BAC RP11-715M8 (Roswell Park Canc... 40 6.2
42gb|AC091708.2| Gallus gallus clone XXbac-68C5, complete sequence 40 6.2
43dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038 40 6.2
44gb|AC163701.4| Gallus gallus BAC clone CH261-117C7 from chromoso... 40 6.2
45gb|AC154628.2| Mus musculus BAC clone RP23-313L7 from 13, comple... 40 6.2
46gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 6.2
47emb|AL645535.16| Mouse DNA sequence from clone RP23-145G23 on ch... 40 6.2 
>ref|NM_189425.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 951

 Score =  149 bits (75), Expect = 9e-33
 Identities = 171/203 (84%)
 Strand = Plus / Minus

                                                                       
Query: 259 gcagtcggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcat 318
           |||||||||||||||||| |||||||  |||||| | |  | |||| |||| |  |||||
Sbjct: 891 gcagtcggtggagaagatgtcggaggcgacgtagctcggcgcgccgtccatgaccggcat 832

                                                                       
Query: 319 gttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacacc 378
           | ||| ||| || ||||||||||||||||| |||| |||||||||||||||||| || ||
Sbjct: 831 gctggcgctgacgctgagcttgttgacgtagtcggagcggtaggtctggccgagcacgcc 772

                                                                       
Query: 379 gtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatc 438
           |||||||||||||| |||| ||| ||||||||| |||||||||| ||| |||||||| ||
Sbjct: 771 gtggacgtcgtcggagaggtcgtagaacttgaagccgatgtcgaggtgagcgaggctgtc 712

                                  
Query: 439 gtcgtcggtcatgccgtagttgt 461
            || ||||| | ||| |||||||
Sbjct: 711 ctcctcggtgacgccatagttgt 689
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  149 bits (75), Expect = 9e-33
 Identities = 171/203 (84%)
 Strand = Plus / Plus

                                                                            
Query: 259      gcagtcggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcat 318
                |||||||||||||||||| |||||||  |||||| | |  | |||| |||| |  |||||
Sbjct: 42696700 gcagtcggtggagaagatgtcggaggcgacgtagctcggcgcgccgtccatgaccggcat 42696759

                                                                            
Query: 319      gttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacacc 378
                | ||| ||| || ||||||||||||||||| |||| |||||||||||||||||| || ||
Sbjct: 42696760 gctggcgctgacgctgagcttgttgacgtagtcggagcggtaggtctggccgagcacgcc 42696819

                                                                            
Query: 379      gtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatc 438
                |||||||||||||| |||| ||| ||||||||| |||||||||| ||| |||||||| ||
Sbjct: 42696820 gtggacgtcgtcggagaggtcgtagaacttgaagccgatgtcgaggtgagcgaggctgtc 42696879

                                       
Query: 439      gtcgtcggtcatgccgtagttgt 461
                 || ||||| | ||| |||||||
Sbjct: 42696880 ctcctcggtgacgccatagttgt 42696902



 Score =  139 bits (70), Expect = 9e-30
 Identities = 211/258 (81%)
 Strand = Plus / Plus

                                                                            
Query: 204      tggccatgccagtgaccatggagattcctgaagagcgaccaaaccgggcgaccttgcagt 263
                ||||| ||||||||||||||||||| || |    ||| || |||| ||||||   |||||
Sbjct: 42692544 tggccctgccagtgaccatggagatgccggcgcggcggccgaacctggcgacggcgcagt 42692603

                                                                            
Query: 264      cggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcatgttgg 323
                ||||||||||||| || |||   |||||| | | || ||||||||| |  |||||| |||
Sbjct: 42692604 cggtggagaagatgtcagagacgacgtagctgggagcgccgcccatcaccggcatgctgg 42692663

                                                                            
Query: 324      tgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacaccgtgga 383
                 ||| || ||||| ||||||||||| |||| |||||||||||||||||| || || ||||
Sbjct: 42692664 cgctgacgctgagattgttgacgtagtcggagcggtaggtctggccgaggacgccatgga 42692723

                                                                            
Query: 384      cgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgt 443
                | ||||||| |||| ||| ||||||||| |||| ||||| |||||||||||| || || |
Sbjct: 42692724 catcgtcggagaggtcgtagaacttgaagccgaggtcgaggtgggcgaggctgtcctcct 42692783

                                  
Query: 444      cggtcatgccgtagttgt 461
                |||| | |||||||||||
Sbjct: 42692784 cggtgacgccgtagttgt 42692801



 Score =  133 bits (67), Expect = 6e-28
 Identities = 169/203 (83%)
 Strand = Plus / Minus

                                                                            
Query: 259      gcagtcggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcat 318
                |||||||| ||||||||| |||||||  |||||| | |  | ||||||||| |  |||||
Sbjct: 42700072 gcagtcggcggagaagatgtcggaggcgacgtagcttggtgcgccgcccatgaccggcat 42700013

                                                                            
Query: 319      gttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacacc 378
                | ||| ||| || ||||||||||||||||| |||| |||||||||||||||||| || ||
Sbjct: 42700012 gctggcgctgacgctgagcttgttgacgtagtcggagcggtaggtctggccgagcacgcc 42699953

                                                                            
Query: 379      gtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatc 438
                 ||||||||||||| |||| ||| ||||||||| |||| ||||| ||| |||||||| ||
Sbjct: 42699952 atggacgtcgtcggagaggtcgtagaacttgaagccgaggtcgaggtgagcgaggctgtc 42699893

                                       
Query: 439      gtcgtcggtcatgccgtagttgt 461
                 || ||||| | ||| |||||||
Sbjct: 42699892 ctcctcggtgacgccatagttgt 42699870



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                            
Query: 355      gcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaaccc 414
                |||||| ||||||||||| || |||| ||||||| ||| |||| ||||||||||| | ||
Sbjct: 42704128 gcggtaagtctggccgagcacgccgtcgacgtcgccggagagggcgtggaacttgtagcc 42704069

                                                            
Query: 415      gatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtagt 458
                || ||||| |||| ||||| | || | | ||||| |||||||||
Sbjct: 42704068 gaggtcgaggtggacgagggtgtccttggcggtcttgccgtagt 42704025
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>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1656_A11
          Length = 148887

 Score =  149 bits (75), Expect = 9e-33
 Identities = 171/203 (84%)
 Strand = Plus / Plus

                                                                         
Query: 259   gcagtcggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcat 318
             |||||||||||||||||| |||||||  |||||| | |  | |||| |||| |  |||||
Sbjct: 29465 gcagtcggtggagaagatgtcggaggcgacgtagctcggcgcgccgtccatgaccggcat 29524

                                                                         
Query: 319   gttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacacc 378
             | ||| ||| || ||||||||||||||||| |||| |||||||||||||||||| || ||
Sbjct: 29525 gctggcgctgacgctgagcttgttgacgtagtcggagcggtaggtctggccgagcacgcc 29584

                                                                         
Query: 379   gtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatc 438
             |||||||||||||| |||| ||| ||||||||| |||||||||| ||| |||||||| ||
Sbjct: 29585 gtggacgtcgtcggagaggtcgtagaacttgaagccgatgtcgaggtgagcgaggctgtc 29644

                                    
Query: 439   gtcgtcggtcatgccgtagttgt 461
              || ||||| | ||| |||||||
Sbjct: 29645 ctcctcggtgacgccatagttgt 29667



 Score =  139 bits (70), Expect = 9e-30
 Identities = 211/258 (81%)
 Strand = Plus / Plus

                                                                         
Query: 204   tggccatgccagtgaccatggagattcctgaagagcgaccaaaccgggcgaccttgcagt 263
             ||||| ||||||||||||||||||| || |    ||| || |||| ||||||   |||||
Sbjct: 25309 tggccctgccagtgaccatggagatgccggcgcggcggccgaacctggcgacggcgcagt 25368

                                                                         
Query: 264   cggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcatgttgg 323
             ||||||||||||| || |||   |||||| | | || ||||||||| |  |||||| |||
Sbjct: 25369 cggtggagaagatgtcagagacgacgtagctgggagcgccgcccatcaccggcatgctgg 25428

                                                                         
Query: 324   tgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacaccgtgga 383
              ||| || ||||| ||||||||||| |||| |||||||||||||||||| || || ||||
Sbjct: 25429 cgctgacgctgagattgttgacgtagtcggagcggtaggtctggccgaggacgccatgga 25488

                                                                         
Query: 384   cgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgt 443
             | ||||||| |||| ||| ||||||||| |||| ||||| |||||||||||| || || |
Sbjct: 25489 catcgtcggagaggtcgtagaacttgaagccgaggtcgaggtgggcgaggctgtcctcct 25548

                               
Query: 444   cggtcatgccgtagttgt 461
             |||| | |||||||||||
Sbjct: 25549 cggtgacgccgtagttgt 25566



 Score =  133 bits (67), Expect = 6e-28
 Identities = 169/203 (83%)
 Strand = Plus / Minus

                                                                         
Query: 259   gcagtcggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcat 318
             |||||||| ||||||||| |||||||  |||||| | |  | ||||||||| |  |||||
Sbjct: 32837 gcagtcggcggagaagatgtcggaggcgacgtagcttggtgcgccgcccatgaccggcat 32778

                                                                         
Query: 319   gttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacacc 378
             | ||| ||| || ||||||||||||||||| |||| |||||||||||||||||| || ||
Sbjct: 32777 gctggcgctgacgctgagcttgttgacgtagtcggagcggtaggtctggccgagcacgcc 32718

                                                                         
Query: 379   gtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatc 438
              ||||||||||||| |||| ||| ||||||||| |||| ||||| ||| |||||||| ||
Sbjct: 32717 atggacgtcgtcggagaggtcgtagaacttgaagccgaggtcgaggtgagcgaggctgtc 32658

                                    
Query: 439   gtcgtcggtcatgccgtagttgt 461
              || ||||| | ||| |||||||
Sbjct: 32657 ctcctcggtgacgccatagttgt 32635



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                         
Query: 355   gcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaaccc 414
             |||||| ||||||||||| || |||| ||||||| ||| |||| ||||||||||| | ||
Sbjct: 36893 gcggtaagtctggccgagcacgccgtcgacgtcgccggagagggcgtggaacttgtagcc 36834

                                                         
Query: 415   gatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtagt 458
             || ||||| |||| ||||| | || | | ||||| |||||||||
Sbjct: 36833 gaggtcgaggtggacgagggtgtccttggcggtcttgccgtagt 36790
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>ref|NM_189423.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 975

 Score =  139 bits (70), Expect = 9e-30
 Identities = 211/258 (81%)
 Strand = Plus / Minus

                                                                       
Query: 204 tggccatgccagtgaccatggagattcctgaagagcgaccaaaccgggcgaccttgcagt 263
           ||||| ||||||||||||||||||| || |    ||| || |||| ||||||   |||||
Sbjct: 970 tggccctgccagtgaccatggagatgccggcgcggcggccgaacctggcgacggcgcagt 911

                                                                       
Query: 264 cggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcatgttgg 323
           ||||||||||||| || |||   |||||| | | || ||||||||| |  |||||| |||
Sbjct: 910 cggtggagaagatgtcagagacgacgtagctgggagcgccgcccatcaccggcatgctgg 851

                                                                       
Query: 324 tgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacaccgtgga 383
            ||| || ||||| ||||||||||| |||| |||||||||||||||||| || || ||||
Sbjct: 850 cgctgacgctgagattgttgacgtagtcggagcggtaggtctggccgaggacgccatgga 791

                                                                       
Query: 384 cgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgt 443
           | ||||||| |||| ||| ||||||||| |||| ||||| |||||||||||| || || |
Sbjct: 790 catcgtcggagaggtcgtagaacttgaagccgaggtcgaggtgggcgaggctgtcctcct 731

                             
Query: 444 cggtcatgccgtagttgt 461
           |||| | |||||||||||
Sbjct: 730 cggtgacgccgtagttgt 713
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>ref|NM_189426.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 993

 Score =  133 bits (67), Expect = 6e-28
 Identities = 169/203 (83%)
 Strand = Plus / Minus

                                                                       
Query: 259 gcagtcggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcat 318
           |||||||| ||||||||| |||||||  |||||| | |  | ||||||||| |  |||||
Sbjct: 933 gcagtcggcggagaagatgtcggaggcgacgtagcttggtgcgccgcccatgaccggcat 874

                                                                       
Query: 319 gttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacacc 378
           | ||| ||| || ||||||||||||||||| |||| |||||||||||||||||| || ||
Sbjct: 873 gctggcgctgacgctgagcttgttgacgtagtcggagcggtaggtctggccgagcacgcc 814

                                                                       
Query: 379 gtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatc 438
            ||||||||||||| |||| ||| ||||||||| |||| ||||| ||| |||||||| ||
Sbjct: 813 atggacgtcgtcggagaggtcgtagaacttgaagccgaggtcgaggtgagcgaggctgtc 754

                                  
Query: 439 gtcgtcggtcatgccgtagttgt 461
            || ||||| | ||| |||||||
Sbjct: 753 ctcctcggtgacgccatagttgt 731
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>dbj|AK122054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J03, full
            insert sequence
          Length = 1352

 Score =  133 bits (67), Expect = 6e-28
 Identities = 169/203 (83%)
 Strand = Plus / Minus

                                                                        
Query: 259  gcagtcggtggagaagatatcggaggtcacgtaggtagaagtgccgcccataattggcat 318
            |||||||| ||||||||| |||||||  |||||| | |  | ||||||||| |  |||||
Sbjct: 1085 gcagtcggcggagaagatgtcggaggcgacgtagcttggtgcgccgcccatgaccggcat 1026

                                                                        
Query: 319  gttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtctggccgagaacacc 378
            | ||| ||| || ||||||||||||||||| |||| |||||||||||||||||| || ||
Sbjct: 1025 gctggcgctgacgctgagcttgttgacgtagtcggagcggtaggtctggccgagcacgcc 966

                                                                        
Query: 379  gtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaagtgggcgaggctatc 438
             ||||||||||||| |||| ||| ||||||||| |||| ||||| ||| |||||||| ||
Sbjct: 965  atggacgtcgtcggagaggtcgtagaacttgaagccgaggtcgaggtgagcgaggctgtc 906

                                   
Query: 439  gtcgtcggtcatgccgtagttgt 461
             || ||||| | ||| |||||||
Sbjct: 905  ctcctcggtgacgccatagttgt 883
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>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0068N01, complete sequence
          Length = 152233

 Score =  101 bits (51), Expect = 2e-18
 Identities = 105/123 (85%)
 Strand = Plus / Minus

                                                                         
Query: 339   tgttgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggc 398
             |||||||||| |||| |||||||||||||||||| || || |||||||||||||||||  
Sbjct: 40598 tgttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggtgagcg 40539

                                                                         
Query: 399   cgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtagt 458
             | | ||||||||| |||| ||||| |||| ||||||  ||||||||||  | ||||||||
Sbjct: 40538 cctcgaacttgaagccgaggtcgaggtggacgaggcagtcgtcgtcggcgacgccgtagt 40479

                
Query: 459   tgt 461
             |||
Sbjct: 40478 tgt 40476
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>gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromosome 5 BAC, complete
             sequence
          Length = 86190

 Score =  101 bits (51), Expect = 2e-18
 Identities = 105/123 (85%)
 Strand = Plus / Minus

                                                                         
Query: 339   tgttgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggc 398
             |||||||||| |||| |||||||||||||||||| || || |||||||||||||||||  
Sbjct: 41116 tgttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggtgagcg 41057

                                                                         
Query: 399   cgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtagt 458
             | | ||||||||| |||| ||||| |||| ||||||  ||||||||||  | ||||||||
Sbjct: 41056 cctcgaacttgaagccgaggtcgaggtggacgaggcagtcgtcgtcggcgacgccgtagt 40997

                
Query: 459   tgt 461
             |||
Sbjct: 40996 tgt 40994
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  101 bits (51), Expect = 2e-18
 Identities = 105/123 (85%)
 Strand = Plus / Minus

                                                                          
Query: 339    tgttgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggc 398
              |||||||||| |||| |||||||||||||||||| || || |||||||||||||||||  
Sbjct: 378951 tgttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggtgagcg 378892

                                                                          
Query: 399    cgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtagt 458
              | | ||||||||| |||| ||||| |||| ||||||  ||||||||||  | ||||||||
Sbjct: 378891 cctcgaacttgaagccgaggtcgaggtggacgaggcagtcgtcgtcggcgacgccgtagt 378832

                 
Query: 459    tgt 461
              |||
Sbjct: 378831 tgt 378829



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                            
Query: 362      gtctggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcg 421
                |||||||| || || || |||||||||||||||||| ||| |||||||||| | | ||||
Sbjct: 27263366 gtctggcccagcacgccatggacgtcgtcggtgagggcgtagaacttgaacgccaggtcg 27263307

                                          
Query: 422      aagtgggcgaggctatcgtcgtcggt 447
                | |||||||||||  || ||||||||
Sbjct: 27263306 aggtgggcgaggcagtcatcgtcggt 27263281
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>dbj|AB021175.1| Zea mays ZmRCP1 mRNA for root cap protein 1, complete cds
          Length = 1225

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 339 tgttgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggc 398
           |||||||||| || | ||||||||||||||| || || ||||| ||||||||||||||| 
Sbjct: 901 tgttgacgtagtccgggcggtaggtctggcccagcacgccgtgcacgtcgtcggtgaggt 842

                                              
Query: 399 cgtggaacttgaacccgatgtcgaagtgggcgagg 433
           ||| ||||||||| |||| ||||| ||| ||||||
Sbjct: 841 cgtagaacttgaagccgaggtcgaggtgcgcgagg 807
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>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete
              sequence
          Length = 187707

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                          
Query: 362    gtctggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcg 421
              ||||||||||| || || |||||||||||||||||  | | ||||||||| |||| ||||
Sbjct: 159676 gtctggccgagcacgccatggacgtcgtcggtgagcgcctcgaacttgaagccgaggtcg 159735

                                                      
Query: 422    aagtgggcgaggctatcgtcgtcggtcatgccgtagttgt 461
              | |||| ||||||  ||||||||||| | |||||||||||
Sbjct: 159736 aggtggacgaggcagtcgtcgtcggtgacgccgtagttgt 159775
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>dbj|AB108421.1| Oryza sativa (japonica cultivar-group) transposon, AnacB14, complete
            sequence
          Length = 7551

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 85/100 (85%)
 Strand = Plus / Minus

                                                                        
Query: 362  gtctggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcg 421
            ||||||||||| || || |||||||||||||||||  | | ||||||||| |||| ||||
Sbjct: 5447 gtctggccgagcacgccatggacgtcgtcggtgagcgcctcgaacttgaagccgaggtcg 5388

                                                    
Query: 422  aagtgggcgaggctatcgtcgtcggtcatgccgtagttgt 461
            | |||| ||||||  ||||||||||| | |||||||||||
Sbjct: 5387 aggtggacgaggcagtcgtcgtcggtgacgccgtagttgt 5348
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                            
Query: 362      gtctggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcg 421
                ||||||||||| || || |||||||||||||||||  | | ||||||||| |||| ||||
Sbjct: 22154732 gtctggccgagcacgccatggacgtcgtcggtgagcgcctcgaacttgaagccgaggtcg 22154791

                                                        
Query: 422      aagtgggcgaggctatcgtcgtcggtcatgccgtagttgt 461
                | |||| ||||||  ||||||||||| | |||||||||||
Sbjct: 22154792 aggtggacgaggcagtcgtcgtcggtgacgccgtagttgt 22154831
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 85/100 (85%)
 Strand = Plus / Plus

                                                                            
Query: 362      gtctggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcg 421
                ||||||||||| || || |||||||||||||||||  | | ||||||||| |||| ||||
Sbjct: 22166795 gtctggccgagcacgccatggacgtcgtcggtgagcgcctcgaacttgaagccgaggtcg 22166854

                                                        
Query: 422      aagtgggcgaggctatcgtcgtcggtcatgccgtagttgt 461
                | |||| ||||||  ||||||||||| | |||||||||||
Sbjct: 22166855 aggtggacgaggcagtcgtcgtcggtgacgccgtagttgt 22166894
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>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19
              map R1938, complete sequence
          Length = 160847

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 99/120 (82%)
 Strand = Plus / Minus

                                                                          
Query: 337    cttgttgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgag 396
              |||||||||||| |||| |||||| ||||| ||||  || ||||| |||||| |||||||
Sbjct: 139042 cttgttgacgtagtcggagcggtacgtctgaccgacgacgccgtgcacgtcgccggtgag 138983

                                                                          
Query: 397    gccgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgta 456
                ||| |||||||||| | | ||||| |||||||||||  |||||| |||| | ||||||
Sbjct: 138982 cgcgtcgaacttgaacgccaggtcgaggtgggcgaggcagtcgtcgccggtgacgccgta 138923
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>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0040B10 map R2918, complete sequence
          Length = 149132

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 99/120 (82%)
 Strand = Plus / Minus

                                                                         
Query: 337   cttgttgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgag 396
             |||||||||||| |||| |||||| ||||| ||||  || ||||| |||||| |||||||
Sbjct: 15185 cttgttgacgtagtcggagcggtacgtctgaccgacgacgccgtgcacgtcgccggtgag 15126

                                                                         
Query: 397   gccgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgta 456
               ||| |||||||||| | | ||||| |||||||||||  |||||| |||| | ||||||
Sbjct: 15125 cgcgtcgaacttgaacgccaggtcgaggtgggcgaggcagtcgtcgccggtgacgccgta 15066
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 99/120 (82%)
 Strand = Plus / Minus

                                                                           
Query: 337     cttgttgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgag 396
               |||||||||||| |||| |||||| ||||| ||||  || ||||| |||||| |||||||
Sbjct: 2363043 cttgttgacgtagtcggagcggtacgtctgaccgacgacgccgtgcacgtcgccggtgag 2362984

                                                                           
Query: 397     gccgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgta 456
                 ||| |||||||||| | | ||||| |||||||||||  |||||| |||| | ||||||
Sbjct: 2362983 cgcgtcgaacttgaacgccaggtcgaggtgggcgaggcagtcgtcgccggtgacgccgta 2362924
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>dbj|AK106826.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-E12, full
            insert sequence
          Length = 1747

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 99/120 (82%)
 Strand = Plus / Plus

                                                                        
Query: 337  cttgttgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgag 396
            |||||||||||| |||| |||||| ||||| ||||  || ||||| |||||| |||||||
Sbjct: 1018 cttgttgacgtagtcggagcggtacgtctgaccgacgacgccgtgcacgtcgccggtgag 1077

                                                                        
Query: 397  gccgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgta 456
              ||| |||||||||| | | ||||| |||||||||||  |||||| |||| | ||||||
Sbjct: 1078 cgcgtcgaacttgaacgccaggtcgaggtgggcgaggcagtcgtcgccggtgacgccgta 1137
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 99/120 (82%)
 Strand = Plus / Minus

                                                                           
Query: 337     cttgttgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgag 396
               |||||||||||| |||| |||||| ||||| ||||  || ||||| |||||| |||||||
Sbjct: 2370824 cttgttgacgtagtcggagcggtacgtctgaccgacgacgccgtgcacgtcgccggtgag 2370765

                                                                           
Query: 397     gccgtggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgta 456
                 ||| |||||||||| | | ||||| |||||||||||  |||||| |||| | ||||||
Sbjct: 2370764 cgcgtcgaacttgaacgccaggtcgaggtgggcgaggcagtcgtcgccggtgacgccgta 2370705
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>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23,
              complete sequence
          Length = 191765

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                          
Query: 362    gtctggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcg 421
              |||||||| || || || |||||||||||||||||| ||| |||||||||| | | ||||
Sbjct: 138334 gtctggcccagcacgccatggacgtcgtcggtgagggcgtagaacttgaacgccaggtcg 138275

                                        
Query: 422    aagtgggcgaggctatcgtcgtcggt 447
              | |||||||||||  || ||||||||
Sbjct: 138274 aggtgggcgaggcagtcatcgtcggt 138249
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>ref|NM_189428.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1026

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                       
Query: 355 gcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaaccc 414
           |||||| ||||||||||| || |||| ||||||| ||| |||| ||||||||||| | ||
Sbjct: 864 gcggtaagtctggccgagcacgccgtcgacgtcgccggagagggcgtggaacttgtagcc 805

                                                       
Query: 415 gatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtagt 458
           || ||||| |||| ||||| | || | | ||||| |||||||||
Sbjct: 804 gaggtcgaggtggacgagggtgtccttggcggtcttgccgtagt 761
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>ref|XM_472395.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 342 tgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggccgt 401
           ||||||| |||| ||||||||||||||| || || ||||| |||||| || ||| |  ||
Sbjct: 859 tgacgtagtcggggcggtaggtctggcccagcacgccgtgcacgtcggcgctgatggagt 800

                                                                   
Query: 402 ggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtag 457
            |||||||||| | |  | || |||||||||||| |||||| |||| | |||||||
Sbjct: 799 agaacttgaacgccacattgaggtgggcgaggctgtcgtcggcggtgaggccgtag 744
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>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
             complete sequence
          Length = 143301

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                         
Query: 342   tgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggccgt 401
             ||||||| |||| ||||||||||||||| || || ||||| |||||| || ||| |  ||
Sbjct: 21066 tgacgtagtcggggcggtaggtctggcccagcacgccgtgcacgtcggcgctgatggagt 21007

                                                                     
Query: 402   ggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtag 457
              |||||||||| | |  | || |||||||||||| |||||| |||| | |||||||
Sbjct: 21006 agaacttgaacgccacattgaggtgggcgaggctgtcgtcggcggtgaggccgtag 20951
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                            
Query: 342      tgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggccgt 401
                ||||||| |||| ||||||||||||||| || || ||||| |||||| || ||| |  ||
Sbjct: 20290433 tgacgtagtcggggcggtaggtctggcccagcacgccgtgcacgtcggcgctgatggagt 20290374

                                                                        
Query: 402      ggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtag 457
                 |||||||||| | |  | || |||||||||||| |||||| |||| | |||||||
Sbjct: 20290373 agaacttgaacgccacattgaggtgggcgaggctgtcgtcggcggtgaggccgtag 20290318
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>dbj|AK108077.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E01, full
           insert sequence
          Length = 1481

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                       
Query: 342 tgacgtaatcggtgcggtaggtctggccgagaacaccgtggacgtcgtcggtgaggccgt 401
           ||||||| |||| ||||||||||||||| || || ||||| |||||| || ||| |  ||
Sbjct: 944 tgacgtagtcggggcggtaggtctggcccagcacgccgtgcacgtcggcgctgatggagt 885

                                                                   
Query: 402 ggaacttgaacccgatgtcgaagtgggcgaggctatcgtcgtcggtcatgccgtag 457
            |||||||||| | |  | || |||||||||||| |||||| |||| | |||||||
Sbjct: 884 agaacttgaacgccacattgaggtgggcgaggctgtcgtcggcggtgaggccgtag 829
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>ref|XM_477688.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 969

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 302 ccgcccataattggcatgttggtgctcacactgagcttgttgacgtaatcggtgcggtag 361
           |||||||||| ||||| ||||| ||| |||||||| |||||||| || |||  |||||  
Sbjct: 563 ccgcccataactggcaagttggcgctgacactgaggttgttgacatagtcgaagcggtga 504

                      
Query: 362 gtctggccgag 372
           |||||||||||
Sbjct: 503 gtctggccgag 493
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                            
Query: 302      ccgcccataattggcatgttggtgctcacactgagcttgttgacgtaatcggtgcggtag 361
                |||||||||| ||||| ||||| ||| |||||||| |||||||| || |||  |||||  
Sbjct: 13289221 ccgcccataactggcaagttggcgctgacactgaggttgttgacatagtcgaagcggtga 13289162

                           
Query: 362      gtctggccgag 372
                |||||||||||
Sbjct: 13289161 gtctggccgag 13289151



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 124/157 (78%)
 Strand = Plus / Plus

                                                                            
Query: 305      cccataattggcatgttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtc 364
                ||||||| ||||||||||| ||| |||||||| ||||| ||||| ||   |||||  |||
Sbjct: 13319941 cccataactggcatgttggcgctgacactgagtttgttcacgtagtcaaagcggtgagtc 13320000

                                                                            
Query: 365      tggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaag 424
                |||||||| || | ||| ||||  || |||||  | | ||||||||| |||| ||||| |
Sbjct: 13320001 tggccgaggaccctgtgcacgttatcagtgagatcatagaacttgaagccgaggtcgagg 13320060

                                                     
Query: 425      tgggcgaggctatcgtcgtcggtcatgccgtagttgt 461
                || | |||| | || || ||||| ||||| |||||||
Sbjct: 13320061 tgagtgaggttgtcctcctcggtgatgccatagttgt 13320097
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>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1123_B01
          Length = 105736

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                        
Query: 302  ccgcccataattggcatgttggtgctcacactgagcttgttgacgtaatcggtgcggtag 361
            |||||||||| ||||| ||||| ||| |||||||| |||||||| || |||  |||||  
Sbjct: 3659 ccgcccataactggcaagttggcgctgacactgaggttgttgacatagtcgaagcggtga 3600

                       
Query: 362  gtctggccgag 372
            |||||||||||
Sbjct: 3599 gtctggccgag 3589



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 124/157 (78%)
 Strand = Plus / Plus

                                                                         
Query: 305   cccataattggcatgttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtc 364
             ||||||| ||||||||||| ||| |||||||| ||||| ||||| ||   |||||  |||
Sbjct: 34379 cccataactggcatgttggcgctgacactgagtttgttcacgtagtcaaagcggtgagtc 34438

                                                                         
Query: 365   tggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaag 424
             |||||||| || | ||| ||||  || |||||  | | ||||||||| |||| ||||| |
Sbjct: 34439 tggccgaggaccctgtgcacgttatcagtgagatcatagaacttgaagccgaggtcgagg 34498

                                                  
Query: 425   tgggcgaggctatcgtcgtcggtcatgccgtagttgt 461
             || | |||| | || || ||||| ||||| |||||||
Sbjct: 34499 tgagtgaggttgtcctcctcggtgatgccatagttgt 34535
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>dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0025D09
          Length = 142593

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                         
Query: 302   ccgcccataattggcatgttggtgctcacactgagcttgttgacgtaatcggtgcggtag 361
             |||||||||| ||||| ||||| ||| |||||||| |||||||| || |||  |||||  
Sbjct: 77084 ccgcccataactggcaagttggcgctgacactgaggttgttgacatagtcgaagcggtga 77025

                        
Query: 362   gtctggccgag 372
             |||||||||||
Sbjct: 77024 gtctggccgag 77014



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 124/157 (78%)
 Strand = Plus / Plus

                                                                          
Query: 305    cccataattggcatgttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtc 364
              ||||||| ||||||||||| ||| |||||||| ||||| ||||| ||   |||||  |||
Sbjct: 107804 cccataactggcatgttggcgctgacactgagtttgttcacgtagtcaaagcggtgagtc 107863

                                                                          
Query: 365    tggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaag 424
              |||||||| || | ||| ||||  || |||||  | | ||||||||| |||| ||||| |
Sbjct: 107864 tggccgaggaccctgtgcacgttatcagtgagatcatagaacttgaagccgaggtcgagg 107923

                                                   
Query: 425    tgggcgaggctatcgtcgtcggtcatgccgtagttgt 461
              || | |||| | || || ||||| ||||| |||||||
Sbjct: 107924 tgagtgaggttgtcctcctcggtgatgccatagttgt 107960
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>ref|XM_477696.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 675

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 124/157 (78%)
 Strand = Plus / Minus

                                                                       
Query: 305 cccataattggcatgttggtgctcacactgagcttgttgacgtaatcggtgcggtaggtc 364
           ||||||| ||||||||||| ||| |||||||| ||||| ||||| ||   |||||  |||
Sbjct: 200 cccataactggcatgttggcgctgacactgagtttgttcacgtagtcaaagcggtgagtc 141

                                                                       
Query: 365 tggccgagaacaccgtggacgtcgtcggtgaggccgtggaacttgaacccgatgtcgaag 424
           |||||||| || | ||| ||||  || |||||  | | ||||||||| |||| ||||| |
Sbjct: 140 tggccgaggaccctgtgcacgttatcagtgagatcatagaacttgaagccgaggtcgagg 81

                                                
Query: 425 tgggcgaggctatcgtcgtcggtcatgccgtagttgt 461
           || | |||| | || || ||||| ||||| |||||||
Sbjct: 80  tgagtgaggttgtcctcctcggtgatgccatagttgt 44
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 362      gtctggccgagaacaccgtggacgtcgtcggtgag 396
                ||||||||||| || || |||||||||||||||||
Sbjct: 28348639 gtctggccgagcacgccatggacgtcgtcggtgag 28348605
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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0661G04
          Length = 157292

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 362   gtctggccgagaacaccgtggacgtcgtcggtgag 396
             ||||||||||| || || |||||||||||||||||
Sbjct: 61217 gtctggccgagcacgccatggacgtcgtcggtgag 61183
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>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0623A10
          Length = 156517

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                 
Query: 362    gtctggccgagaacaccgtggacgtcgtcggtgag 396
              ||||||||||| || || |||||||||||||||||
Sbjct: 146668 gtctggccgagcacgccatggacgtcgtcggtgag 146634
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>emb|AL392185.10| Human DNA sequence from clone RP11-332M4 on chromosome 9 Contain a
            novel gene, complete sequence
          Length = 69582

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 207  ccatgccagtgaccatggaga 227
            |||||||||||||||||||||
Sbjct: 3780 ccatgccagtgaccatggaga 3760
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>emb|AL031686.2|HS981L23 Human DNA sequence from clone RP5-981L23 on chromosome 20q12.1-13.2
             Contains the 5' end of the ELMO2 gene for engulfment and
             cell motility 2 (ced-12 homolog, C. elegans), a Krueppel
             type zinc-finger protein pseudogene, a Makorin (MKRN1 or
             MKRN3) ring finger protein pseudogene, a novel KRAB box
             type zinc-finger protein gene, a novel gene
             (DKFZp547G0215) and a CpG island, complete sequence
          Length = 94817

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 2     tcttctgaaatctcttttattccat 26
             ||||||||||| |||||||||||||
Sbjct: 83755 tcttctgaaatttcttttattccat 83779
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>emb|AL844864.6| Mouse DNA sequence from clone RP23-360L8 on chromosome X, complete
              sequence
          Length = 138582

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 2      tcttctgaaatctcttttattccat 26
              ||||||||||||| |||||||||||
Sbjct: 131719 tcttctgaaatcttttttattccat 131695
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>gb|AE014849.1| Plasmodium falciparum 3D7 chromosome 12, section 6 of 9 of the complete
              sequence
          Length = 250421

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     cttttattccatatgataat 34
              ||||||||||||||||||||
Sbjct: 198267 cttttattccatatgataat 198286
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>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16
          Length = 349841

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    gaacttgaacccgatgtcga 422
              ||||||||||||||||||||
Sbjct: 138060 gaacttgaacccgatgtcga 138041
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>emb|AL670999.4| Mouse DNA sequence from clone RP23-168F16 on chromosome 4 Contains the
              (pseudo)gene for a novel protein similar to high-mobility
              group box 1 (Hmgb1), complete sequence
          Length = 226259

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    ccataattggcatgttggtg 325
              ||||||||||||||||||||
Sbjct: 177933 ccataattggcatgttggtg 177952
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>emb|CR352264.6| Mouse DNA sequence from clone RP23-344N9 on chromosome 4 Contains a high
              mobility group box 1 (Hmgb1) pseudogene, complete sequence
          Length = 185595

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    ccataattggcatgttggtg 325
              ||||||||||||||||||||
Sbjct: 137266 ccataattggcatgttggtg 137285
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>gb|AC126613.6| Homo sapiens 12 BAC RP11-715M8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 125001

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 7     tgaaatctcttttattccatatgataat 34
             ||||||||||||||||| ||||| ||||
Sbjct: 18411 tgaaatctcttttattcaatatgttaat 18438
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>gb|AC091708.2| Gallus gallus clone XXbac-68C5, complete sequence
          Length = 124309

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   aactctagaatgtcaagtta 160
             ||||||||||||||||||||
Sbjct: 57269 aactctagaatgtcaagtta 57250
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>dbj|AP007169.1| Aspergillus oryzae RIB40 genomic DNA, SC038
          Length = 1725576

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 71      gatgacatgatcgtgcgtatcatg 94
               ||||||||||||||||| ||||||
Sbjct: 1125048 gatgacatgatcgtgcgcatcatg 1125071
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>gb|AC163701.4| Gallus gallus BAC clone CH261-117C7 from chromosome unknown, complete
              sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    aactctagaatgtcaagtta 160
              ||||||||||||||||||||
Sbjct: 163007 aactctagaatgtcaagtta 163026
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>gb|AC154628.2| Mus musculus BAC clone RP23-313L7 from 13, complete sequence
          Length = 212309

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      cttctgaaatctcttttatt 22
              ||||||||||||||||||||
Sbjct: 167413 cttctgaaatctcttttatt 167394
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 384     cgtcgtcggtgaggccgtgg 403
               ||||||||||||||||||||
Sbjct: 3292125 cgtcgtcggtgaggccgtgg 3292106
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>emb|AL645535.16| Mouse DNA sequence from clone RP23-145G23 on chromosome 11, complete
             sequence
          Length = 161363

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   ccatgccagtgaccatggag 226
             ||||||||||||||||||||
Sbjct: 92760 ccatgccagtgaccatggag 92741


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,914,055
Number of Sequences: 3902068
Number of extensions: 2914055
Number of successful extensions: 53721
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53387
Number of HSP's gapped (non-prelim): 315
length of query: 461
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 439
effective length of database: 17,147,199,772
effective search space: 7527620699908
effective search space used: 7527620699908
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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