ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108995.1| Zea mays PCO109727 mRNA sequence 305 7e-80
2ref|NM_188437.1| Oryza sativa (japonica cultivar-group), predic... 264 2e-67
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 264 2e-67
4dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic D... 264 2e-67
5dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic D... 264 2e-67
6dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
7dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
8dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clon... 264 2e-67
9gb|AY104407.1| Zea mays PCO114073 mRNA sequence 76 1e-10
10ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa815... 72 2e-09
11ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa814... 70 8e-09
12dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 8e-09
13dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 8e-09
14ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa815... 66 1e-07
15dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
16ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa814... 60 7e-06
17dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
18gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full... 56 1e-04
19dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
20dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
21dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
22gb|AY103823.1| Zea mays PCO141891 mRNA sequence 56 1e-04
23dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
24dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
25dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
26dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
27dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
28gb|AY107565.1| Zea mays PCO081097 mRNA sequence 52 0.002
29ref|XM_476138.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
30gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence 50 0.007
31gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.007
32gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.007
33gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full... 50 0.007
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
35dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
36gb|AY104167.1| Zea mays PCO062696 mRNA sequence 50 0.007
37emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on ch... 50 0.007
38gb|AC078992.23| Homo sapiens 12q BAC RP11-144F15 (Roswell Park C... 46 0.11
39ref|XM_476136.1| Oryza sativa (japonica cultivar-group), predic... 44 0.43
40gb|AY580163.1| Oryza sativa (japonica cultivar-group) putative l... 44 0.43
41gb|AC118230.6| Mus musculus chromosome 10, clone RP23-462F16, co... 44 0.43
42gb|AC159653.8| Mus musculus 10 BAC RP23-479H2 (Roswell Park Canc... 44 0.43
43dbj|AK100289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
44dbj|AK059511.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
45ref|XM_464842.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
46gb|AC139130.10| Mus musculus chromosome 15, clone RP23-210B16, c... 42 1.7
47gb|AC157518.6| Mus musculus BAC clone RP23-457D23 from chromosom... 42 1.7
48emb|CT010454.8| Mouse DNA sequence from clone RP23-348C22 on chr... 42 1.7
49gb|AC118026.7| Mus musculus chromosome 10, clone RP23-463I7, com... 42 1.7
50gb|BT008971.1| Triticum aestivum clone wdk1c.pk023.m3:fis, full ... 42 1.7
51gb|AC160115.2| Mus musculus BAC clone RP23-473K23 from chromosom... 42 1.7
52gb|AC103077.6| Rattus norvegicus BAC CH230-224J5 (Children's Ho... 42 1.7
53emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on ch... 42 1.7
54emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on ch... 42 1.7
55dbj|AB208007.1| Oryzias latipes gene for hoxC8a, complete cds 42 1.7
56dbj|AB232922.1| Oryzias latipes hox gene cluster, complete cds, ... 42 1.7
57gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosom... 42 1.7
58dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
59ref|XM_217901.3| PREDICTED: Rattus norvegicus similar to RIKEN c... 42 1.7
60dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
61dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
62dbj|AK070671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
63emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f1... 42 1.7
64dbj|AK061300.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
65gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, comp... 42 1.7
66emb|BX005269.4| Zebrafish DNA sequence from clone CH211-160L17 i... 42 1.7
67gb|AC130926.4| Rattus norvegicus BAC CH230-39O11 (Children's Ho... 42 1.7
68emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11... 42 1.7
69gb|AC102764.12| Mus musculus chromosome 8, clone RP24-266L17, co... 42 1.7
70emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chro... 42 1.7
71emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chr... 42 1.7
72dbj|AB026965.1| Oryzias latipes mRNA for HOXC8A, partial cds 42 1.7
73gb|AC164170.7| Mus musculus 10 BAC RP24-419C12 (Roswell Park Can... 40 6.7
74gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 6.7
75gb|AY618698.1| Avena prostrata strain CC7060 beta-amyrin synthas... 40 6.7
76gb|AE002107.1| Ureaplasma parvum serovar 3 str. ATCC 700970 sect... 40 6.7
77gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, com... 40 6.7
78gb|AC115810.17| Mus musculus chromosome 16, clone RP23-417P10, c... 40 6.7
79gb|AC129773.4| Mus musculus BAC clone RP24-73D4 from chromosome ... 40 6.7
80emb|CR354562.12| Zebrafish DNA sequence from clone DKEY-25B23 in... 40 6.7
81emb|CR724248.2|CNS0GLRY Tetraodon nigroviridis full-length cDNA 40 6.7
82gb|AC114652.7| Mus musculus chromosome 18, clone RP24-156O17, co... 40 6.7
83ref|XM_788802.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.7
84gb|AY158230.1| Mus musculus strain 129/SvJ chromosome 10 clone 1... 40 6.7
85gb|AC129312.6| Mus musculus BAC clone RP24-405K6 from chromosome... 40 6.7
86gb|AC117388.3| Homo sapiens 3 BAC RP11-22C21 (Roswell Park Cance... 40 6.7
87gb|AY171572.1|AY171569S4 Petromyzon marinus ABCB9-like TAP-famil... 40 6.7
88gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosom... 40 6.7
89gb|AC068039.6| Homo sapiens BAC clone RP11-703L16 from 2, comple... 40 6.7
90gb|AC079907.25| Homo sapiens 12q BAC RP11-554E23 (Roswell Park C... 40 6.7
91ref|XM_311349.2| Anopheles gambiae str. PEST ENSANGP00000001678 ... 40 6.7
92emb|BX004787.8| Zebrafish DNA sequence from clone DKEY-28B17 in ... 40 6.7
93emb|BX005319.6| Zebrafish DNA sequence from clone DKEY-10F23, co... 40 6.7
94gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, comple... 40 6.7
95emb|BX005190.8| Mouse DNA sequence from clone RP23-383A22 on chr... 40 6.7
96gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, comple... 40 6.7
97gb|AC140407.5| Mus musculus BAC clone RP23-142K9 from chromosome... 40 6.7
98gb|AC117715.10| Mus musculus chromosome 7, clone RP23-62M19, com... 40 6.7
99gb|AC154774.2| Mus musculus BAC clone RP24-455C12 from chromosom... 40 6.7
100gb|AC171336.3| Mus musculus BAC RP24-286O17 (Roswell Park Cance... 40 6.7 
>gb|AY108995.1| Zea mays PCO109727 mRNA sequence
          Length = 847

 Score =  305 bits (154), Expect = 7e-80
 Identities = 202/218 (92%)
 Strand = Plus / Minus

                                                                       
Query: 266 tcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgtag 325
           |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 386 tcgaggatgggcgggtcggcgaagggcccgtagagccagcccctggcgatgtggccgtag 327

                                                                       
Query: 326 gctgcctccgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacgcg 385
           || ||||||||||||||||||||||||||||||||||||||||| |||||   |||||||
Sbjct: 326 gcggcctccgtgaggtggatgccgtcccagctccagtggttggaggggtccgggcacgcg 267

                                                                       
Query: 386 tacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccggc 445
           ||||| || ||||| |||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 266 tacgcccccggctcgccgcacttggacgtcaggttgaagttgtactcgcccacgcccggc 207

                                                 
Query: 446 gccccgcagcacgccctcggcttctgcctcagcatccc 483
           || ||||||||||||| |||| ||||| ||||||||||
Sbjct: 206 gcgccgcagcacgcccgcggcgtctgcttcagcatccc 169
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>ref|NM_188437.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1119

 Score =  264 bits (133), Expect = 2e-67
 Identities = 193/213 (90%)
 Strand = Plus / Minus

                                                                        
Query: 264  tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 323
            |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 1105 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 1046

                                                                        
Query: 324  aggctgcctccgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 383
            |||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1045 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 986

                                                                        
Query: 384  cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 443
            ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 985  cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 926

                                             
Query: 444  gcgccccgcagcacgccctcggcttctgcctca 476
            | |||||||||||||||| |||| |||||||||
Sbjct: 925  gagccccgcagcacgcccgcggcgtctgcctca 893
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  264 bits (133), Expect = 2e-67
 Identities = 193/213 (90%)
 Strand = Plus / Minus

                                                                           
Query: 264     tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 323
               |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 6282233 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 6282174

                                                                           
Query: 324     aggctgcctccgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 383
               |||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 6282173 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 6282114

                                                                           
Query: 384     cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 443
               ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 6282113 cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 6282054

                                                
Query: 444     gcgccccgcagcacgccctcggcttctgcctca 476
               | |||||||||||||||| |||| |||||||||
Sbjct: 6282053 gagccccgcagcacgcccgcggcgtctgcctca 6282021



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                               
Query: 310     ggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccagct 357
               ||||||| || ||||||| |||||||||||||||||||||||||||||
Sbjct: 6365997 ggcgatgcgggcgtaggccgcctccgtgaggtggatgccgtcccagct 6365950



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                      
Query: 317     tggccgtaggctgcctccgtgaggtggatgccgtcccag 355
               ||||||||||| |||||||||||||||||||||||||||
Sbjct: 6342901 tggccgtaggccgcctccgtgaggtggatgccgtcccag 6342863



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                    
Query: 321     cgtaggctgcctccgtgaggtggatgccgtcccagct 357
               ||||||| |||||||||||||||||||||||||||||
Sbjct: 6380766 cgtaggccgcctccgtgaggtggatgccgtcccagct 6380730



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                             
Query: 310     ggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccag 355
               ||||||| || ||||||| ||||||||||||||||| |||||||||
Sbjct: 6356932 ggcgatgcgggcgtaggccgcctccgtgaggtggatcccgtcccag 6356887
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>dbj|AP003104.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OSJNBa0038J17
          Length = 180186

 Score =  264 bits (133), Expect = 2e-67
 Identities = 193/213 (90%)
 Strand = Plus / Minus

                                                                          
Query: 264    tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 323
              |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 144431 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 144372

                                                                          
Query: 324    aggctgcctccgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 383
              |||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 144371 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 144312

                                                                          
Query: 384    cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 443
              ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 144311 cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 144252

                                               
Query: 444    gcgccccgcagcacgccctcggcttctgcctca 476
              | |||||||||||||||| |||| |||||||||
Sbjct: 144251 gagccccgcagcacgcccgcggcgtctgcctca 144219
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>dbj|AP001633.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0515G01
          Length = 175072

 Score =  264 bits (133), Expect = 2e-67
 Identities = 193/213 (90%)
 Strand = Plus / Minus

                                                                         
Query: 264   tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 323
             |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 53299 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 53240

                                                                         
Query: 324   aggctgcctccgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 383
             |||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 53239 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 53180

                                                                         
Query: 384   cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 443
             ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 53179 cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 53120

                                              
Query: 444   gcgccccgcagcacgccctcggcttctgcctca 476
             | |||||||||||||||| |||| |||||||||
Sbjct: 53119 gagccccgcagcacgcccgcggcgtctgcctca 53087



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                              
Query: 310    ggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccagct 357
              ||||||| || ||||||| |||||||||||||||||||||||||||||
Sbjct: 137063 ggcgatgcgggcgtaggccgcctccgtgaggtggatgccgtcccagct 137016



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                     
Query: 317    tggccgtaggctgcctccgtgaggtggatgccgtcccag 355
              ||||||||||| |||||||||||||||||||||||||||
Sbjct: 113967 tggccgtaggccgcctccgtgaggtggatgccgtcccag 113929



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                   
Query: 321    cgtaggctgcctccgtgaggtggatgccgtcccagct 357
              ||||||| |||||||||||||||||||||||||||||
Sbjct: 151832 cgtaggccgcctccgtgaggtggatgccgtcccagct 151796



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 310    ggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccag 355
              ||||||| || ||||||| ||||||||||||||||| |||||||||
Sbjct: 127998 ggcgatgcgggcgtaggccgcctccgtgaggtggatcccgtcccag 127953
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>dbj|AK104740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D10, full
            insert sequence
          Length = 1356

 Score =  264 bits (133), Expect = 2e-67
 Identities = 193/213 (90%)
 Strand = Plus / Minus

                                                                        
Query: 264  tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 323
            |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 1029 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 970

                                                                        
Query: 324  aggctgcctccgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 383
            |||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 969  aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 910

                                                                        
Query: 384  cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 443
            ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 909  cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 850

                                             
Query: 444  gcgccccgcagcacgccctcggcttctgcctca 476
            | |||||||||||||||| |||| |||||||||
Sbjct: 849  gagccccgcagcacgcccgcggcgtctgcctca 817
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>dbj|AK065001.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E04, full
            insert sequence
          Length = 1583

 Score =  264 bits (133), Expect = 2e-67
 Identities = 193/213 (90%)
 Strand = Plus / Minus

                                                                        
Query: 264  tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 323
            |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 1257 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 1198

                                                                        
Query: 324  aggctgcctccgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 383
            |||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1197 aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 1138

                                                                        
Query: 384  cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 443
            ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 1137 cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 1078

                                             
Query: 444  gcgccccgcagcacgccctcggcttctgcctca 476
            | |||||||||||||||| |||| |||||||||
Sbjct: 1077 gagccccgcagcacgcccgcggcgtctgcctca 1045
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>dbj|AK060120.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-F04, full
            insert sequence
          Length = 1356

 Score =  264 bits (133), Expect = 2e-67
 Identities = 193/213 (90%)
 Strand = Plus / Minus

                                                                        
Query: 264  tctcgacgatgggcgggtcggcgaagggcccgtagagccatcccctggcgatgtggccgt 323
            |||||| |||||| ||||||||||| || ||||||||||| ||| |||||||||||||||
Sbjct: 1029 tctcgaggatgggagggtcggcgaacgggccgtagagccagcccttggcgatgtggccgt 970

                                                                        
Query: 324  aggctgcctccgtgaggtggatgccgtcccagctccagtggttggacgggtcgtcgcacg 383
            |||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 969  aggacgcctcggtgaggtggatgccgtcccagctccagtggttcgacgggtcgtcgcacg 910

                                                                        
Query: 384  cgtacgcgccgggctccccgcacttggacgtcaggttgaagttgtacacccccacgcccg 443
            ||||||  || || ||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct: 909  cgtacgaccccgggtccccgcacttggacgtcaggttgaagttgtactccccgacccccg 850

                                             
Query: 444  gcgccccgcagcacgccctcggcttctgcctca 476
            | |||||||||||||||| |||| |||||||||
Sbjct: 849  gagccccgcagcacgcccgcggcgtctgcctca 817
to top
>gb|AY104407.1| Zea mays PCO114073 mRNA sequence
          Length = 1726

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                        
Query: 279  ggtcggcgaagggcccgtagagccatcccctggcgatgtggccgtaggctgcctccgtga 338
            |||| ||||| |||||||| ||||| ||  ||||||| |||| |||||| |||||||| |
Sbjct: 1365 ggtccgcgaaaggcccgtatagccagcctttggcgatatggcggtaggcagcctccgtca 1306

                                  
Query: 339  ggtggatgccgtcccagctcca 360
            |||| |||||||||||||||||
Sbjct: 1305 ggtgaatgccgtcccagctcca 1284
to top
>ref|NM_188456.1| Oryza sativa (japonica cultivar-group), Ozsa8151 predicted mRNA
          Length = 1137

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                            
Query: 310  ggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccagct 357
            ||||||| || ||||||| |||||||||||||||||||||||||||||
Sbjct: 1077 ggcgatgcgggcgtaggccgcctccgtgaggtggatgccgtcccagct 1030
to top
>ref|NM_188451.1| Oryza sativa (japonica cultivar-group), Ozsa8146 predicted mRNA
          Length = 1194

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 317  tggccgtaggctgcctccgtgaggtggatgccgtcccag 355
            ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1076 tggccgtaggccgcctccgtgaggtggatgccgtcccag 1038
to top
>dbj|AK104443.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-G04, full
            insert sequence
          Length = 1526

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 317  tggccgtaggctgcctccgtgaggtggatgccgtcccag 355
            ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1146 tggccgtaggccgcctccgtgaggtggatgccgtcccag 1108
to top
>dbj|AK058429.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E09, full
            insert sequence
          Length = 1531

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 317  tggccgtaggctgcctccgtgaggtggatgccgtcccag 355
            ||||||||||| |||||||||||||||||||||||||||
Sbjct: 1146 tggccgtaggccgcctccgtgaggtggatgccgtcccag 1108
to top
>ref|NM_188460.1| Oryza sativa (japonica cultivar-group), Ozsa8155 predicted mRNA
          Length = 1110

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                 
Query: 321  cgtaggctgcctccgtgaggtggatgccgtcccagct 357
            ||||||| |||||||||||||||||||||||||||||
Sbjct: 1039 cgtaggccgcctccgtgaggtggatgccgtcccagct 1003
to top
>dbj|AP002861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0665D10
          Length = 134967

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                 
Query: 321  cgtaggctgcctccgtgaggtggatgccgtcccagct 357
            ||||||| |||||||||||||||||||||||||||||
Sbjct: 3161 cgtaggccgcctccgtgaggtggatgccgtcccagct 3125
to top
>ref|NM_188454.1| Oryza sativa (japonica cultivar-group), Ozsa8149 predicted mRNA
          Length = 1137

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 310  ggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccag 355
            ||||||| || ||||||| ||||||||||||||||| |||||||||
Sbjct: 1071 ggcgatgcgggcgtaggccgcctccgtgaggtggatcccgtcccag 1026
to top
>dbj|AK107557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B05, full
            insert sequence
          Length = 1723

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                          
Query: 310  ggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccag 355
            ||||||| || ||||||| ||||||||||||||||| |||||||||
Sbjct: 1300 ggcgatgcgggcgtaggccgcctccgtgaggtggatcccgtcccag 1255
to top
>gb|BT009331.1| Triticum aestivum clone wlm24.pk0027.a6:fis, full insert mRNA
            sequence
          Length = 1634

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 322  gtaggctgcctccgtgaggtggatgccgtcccagct 357
            |||||| ||||| |||||||||||||||||||||||
Sbjct: 1187 gtaggcggcctcggtgaggtggatgccgtcccagct 1152
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                               
Query: 326     gctgcctccgtgaggtggatgccgtcccagct 357
               |||||||| |||||||||||||||||||||||
Sbjct: 2907400 gctgcctcggtgaggtggatgccgtcccagct 2907431



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                             
Query: 329     gcctccgtgaggtggatgccgtcccagctc 358
               ||||||||||| ||||||||||||||||||
Sbjct: 2894447 gcctccgtgagatggatgccgtcccagctc 2894418
to top
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046E09
          Length = 146776

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 326   gctgcctccgtgaggtggatgccgtcccagct 357
             |||||||| |||||||||||||||||||||||
Sbjct: 67546 gctgcctcggtgaggtggatgccgtcccagct 67577



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 329   gcctccgtgaggtggatgccgtcccagctc 358
             ||||||||||| ||||||||||||||||||
Sbjct: 54593 gcctccgtgagatggatgccgtcccagctc 54564
to top
>dbj|AK066113.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I09, full
            insert sequence
          Length = 1392

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 326  gctgcctccgtgaggtggatgccgtcccagct 357
            |||||||| |||||||||||||||||||||||
Sbjct: 1032 gctgcctcggtgaggtggatgccgtcccagct 1001
to top
>gb|AY103823.1| Zea mays PCO141891 mRNA sequence
          Length = 1313

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 322  gtaggctgcctccgtgaggtggatgccgtcccagct 357
            |||||| ||||| |||||||||||||||||||||||
Sbjct: 1138 gtaggcggcctcggtgaggtggatgccgtcccagct 1103
to top
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0085L11
          Length = 148142

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                            
Query: 329    gcctccgtgaggtggatgccgtcccagctc 358
              ||||||||||| ||||||||||||||||||
Sbjct: 137928 gcctccgtgagatggatgccgtcccagctc 137899
to top
>dbj|AK121780.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M11, full
            insert sequence
          Length = 1430

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 329  gcctccgtgaggtggatgccgtcccagctc 358
            ||||||||||| ||||||||||||||||||
Sbjct: 1081 gcctccgtgagatggatgccgtcccagctc 1052
to top
>dbj|AK104883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-H08, full
            insert sequence
          Length = 1429

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 329  gcctccgtgaggtggatgccgtcccagctc 358
            ||||||||||| ||||||||||||||||||
Sbjct: 1080 gcctccgtgagatggatgccgtcccagctc 1051
to top
>dbj|AK104394.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C04, full
            insert sequence
          Length = 1417

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 329  gcctccgtgaggtggatgccgtcccagctc 358
            ||||||||||| ||||||||||||||||||
Sbjct: 1078 gcctccgtgagatggatgccgtcccagctc 1049
to top
>dbj|AK061497.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D03, full
            insert sequence
          Length = 1450

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 329  gcctccgtgaggtggatgccgtcccagctc 358
            ||||||||||| ||||||||||||||||||
Sbjct: 1078 gcctccgtgagatggatgccgtcccagctc 1049
to top
>gb|AY107565.1| Zea mays PCO081097 mRNA sequence
          Length = 916

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Minus

                                             
Query: 322 gtaggctgcctccgtgaggtggatgccgtcccag 355
           |||||| ||||| |||||||||||||||||||||
Sbjct: 549 gtaggccgcctcggtgaggtggatgccgtcccag 516
to top
>ref|XM_476138.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1113

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 329  gcctccgtgaggtggatgccgtcccagct 357
            ||||| |||||||||||||||||||||||
Sbjct: 1022 gcctcggtgaggtggatgccgtcccagct 994
to top
>gb|BT019092.1| Zea mays clone Contig690.F mRNA sequence
          Length = 811

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 329 gcctccgtgaggtggatgccgtcccagct 357
           ||||| |||||||||||||||||||||||
Sbjct: 501 gcctcggtgaggtggatgccgtcccagct 473
to top
>gb|AC104705.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1008_D08,
             complete sequence
          Length = 94286

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 329   gcctccgtgaggtggatgccgtcccagct 357
             ||||| |||||||||||||||||||||||
Sbjct: 46188 gcctcggtgaggtggatgccgtcccagct 46160



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 322   gtaggctgcctccgtgaggtggatgccgtcccag 355
             |||||| ||||| || ||||||||||||||||||
Sbjct: 10429 gtaggcggcctcggtaaggtggatgccgtcccag 10396
to top
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07,
              complete sequence
          Length = 123167

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 329    gcctccgtgaggtggatgccgtcccagct 357
              ||||| |||||||||||||||||||||||
Sbjct: 113089 gcctcggtgaggtggatgccgtcccagct 113061



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 322   gtaggctgcctccgtgaggtggatgccgtcccag 355
             |||||| ||||| || ||||||||||||||||||
Sbjct: 77330 gtaggcggcctcggtaaggtggatgccgtcccag 77297
to top
>gb|BT009201.1| Triticum aestivum clone wle1n.pk0009.e6:fis, full insert mRNA
            sequence
          Length = 1334

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                 
Query: 322  gtaggctgcctccgtgaggtggatgccgtcccagctc 358
            |||||| |||||||| |||||||| ||||||||||||
Sbjct: 1064 gtaggccgcctccgtcaggtggatcccgtcccagctc 1028
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 329     gcctccgtgaggtggatgccgtcccagct 357
               ||||| |||||||||||||||||||||||
Sbjct: 6741927 gcctcggtgaggtggatgccgtcccagct 6741899



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 322     gtaggctgcctccgtgaggtggatgccgtcccag 355
               |||||| ||||| || ||||||||||||||||||
Sbjct: 6706168 gtaggcggcctcggtaaggtggatgccgtcccag 6706135
to top
>dbj|AK122049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114D08, full
            insert sequence
          Length = 1551

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 329  gcctccgtgaggtggatgccgtcccagct 357
            ||||| |||||||||||||||||||||||
Sbjct: 1112 gcctcggtgaggtggatgccgtcccagct 1084
to top
>gb|AY104167.1| Zea mays PCO062696 mRNA sequence
          Length = 1460

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 329  gcctccgtgaggtggatgccgtcccagct 357
            |||||||| ||||||||||||||||||||
Sbjct: 1092 gcctccgtcaggtggatgccgtcccagct 1064
to top
>emb|AL669929.14| Mouse DNA sequence from clone RP23-197J15 on chromosome X, complete
             sequence
          Length = 204206

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 175   ttttcatttctctacatacatacag 199
             |||||||||||||||||||||||||
Sbjct: 69461 ttttcatttctctacatacatacag 69485
to top
>gb|AC078992.23| Homo sapiens 12q BAC RP11-144F15 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 84657

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 466   cttctgcctcagcatcccccatt 488
             |||||||||||||||||||||||
Sbjct: 65835 cttctgcctcagcatcccccatt 65857
to top
>ref|XM_476136.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1086

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 322  gtaggctgcctccgtgaggtggatgccgtcccag 355
            |||||| ||||| || ||||||||||||||||||
Sbjct: 1026 gtaggcggcctcggtaaggtggatgccgtcccag 993
to top
>gb|AY580163.1| Oryza sativa (japonica cultivar-group) putative lipase mRNA, complete
            cds
          Length = 1413

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 322  gtaggctgcctccgtgaggtggatgccgtcccag 355
            |||||| ||||| || ||||||||||||||||||
Sbjct: 1088 gtaggcggcctcggtaaggtggatgccgtcccag 1055
to top
>gb|AC118230.6| Mus musculus chromosome 10, clone RP23-462F16, complete sequence
          Length = 204781

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 174   gttttcatttctctacatacatacag 199
             ||||||||||||||||||||| ||||
Sbjct: 50824 gttttcatttctctacatacagacag 50849
to top
>gb|AC159653.8| Mus musculus 10 BAC RP23-479H2 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 168480

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 174   gttttcatttctctacatacatacag 199
             ||||||||||||||||||||| ||||
Sbjct: 49074 gttttcatttctctacatacagacag 49049
to top
>dbj|AK100289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023075I03, full
            insert sequence
          Length = 1410

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 322  gtaggctgcctccgtgaggtggatgccgtcccag 355
            |||||| ||||| || ||||||||||||||||||
Sbjct: 1092 gtaggcggcctcggtaaggtggatgccgtcccag 1059
to top
>dbj|AK059511.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-B05, full
            insert sequence
          Length = 1422

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 322  gtaggctgcctccgtgaggtggatgccgtcccag 355
            |||||| ||||| || ||||||||||||||||||
Sbjct: 1103 gtaggcggcctcggtaaggtggatgccgtcccag 1070
to top
>ref|XM_464842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1149

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 308  ctggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccagctcca 360
            ||||| ||||| ||||| || ||||| || ||||| ||||| |||||||||||
Sbjct: 1097 ctggcaatgtgaccgtaagccgcctctgtcaggtgaatgccatcccagctcca 1045
to top
>gb|AC139130.10| Mus musculus chromosome 15, clone RP23-210B16, complete sequence
          Length = 198154

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 175   ttttcatttctctacatacatacag 199
             ||||||||| |||||||||||||||
Sbjct: 23102 ttttcatttttctacatacatacag 23126
to top
>gb|AC157518.6| Mus musculus BAC clone RP23-457D23 from chromosome 15, complete
             sequence
          Length = 172962

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 175   ttttcatttctctacatacatacag 199
             ||||||||| |||||||||||||||
Sbjct: 15223 ttttcatttttctacatacatacag 15199
to top
>emb|CT010454.8| Mouse DNA sequence from clone RP23-348C22 on chromosome 13, complete
              sequence
          Length = 221281

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 175    ttttcatttctctacatacatacag 199
              ||||||||| |||||||||||||||
Sbjct: 115038 ttttcatttttctacatacatacag 115062
to top
>gb|AC118026.7| Mus musculus chromosome 10, clone RP23-463I7, complete sequence
          Length = 191392

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 175    ttttcatttctctacatacatacag 199
              ||||||||| |||||||||||||||
Sbjct: 155452 ttttcatttttctacatacatacag 155428
to top
>gb|BT008971.1| Triticum aestivum clone wdk1c.pk023.m3:fis, full insert mRNA sequence
          Length = 1472

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 322  gtaggctgcctccgtgaggtggatgccgtcccagctc 358
            |||||| ||||| || | |||||||||||||||||||
Sbjct: 1113 gtaggcggcctcggtcatgtggatgccgtcccagctc 1077
to top
>gb|AC160115.2| Mus musculus BAC clone RP23-473K23 from chromosome 13, complete
             sequence
          Length = 182345

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 175   ttttcatttctctacatacatacag 199
             |||||||||||||||||||| ||||
Sbjct: 26682 ttttcatttctctacatacagacag 26658
to top
>gb|AC103077.6| Rattus norvegicus  BAC CH230-224J5 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 200930

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 175    ttttcatttctctacatacatacag 199
              ||||||||| |||||||||||||||
Sbjct: 127890 ttttcatttttctacatacatacag 127914
to top
>emb|AL596103.22| Mouse DNA sequence from clone RP23-309E16 on chromosome 11 Contains
            the P4ha2 gene for procollagen-proline 2-oxoglutarate
            4-dioxygenase (proline 4-hydroxylase) alpha II
            polypeptide, a novel pseudogene, two novel genes, a
            diazepam binding inhibitor (Dbi) pseudogene, the Csf2
            gene for colony stimulating factor 2
            (granulocyte-macrophage), the Il3 gene for interleukin 3
            and a CpG island, complete sequence
          Length = 199500

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 175  ttttcatttctctacatacatacag 199
            ||||||||| |||||||||||||||
Sbjct: 1599 ttttcatttttctacatacatacag 1575
to top
>emb|AL596444.10| Mouse DNA sequence from clone RP23-354D12 on chromosome 11 Contains
           the gene for reversion induced LIM protein (Ril), the
           Slc22a4 and Slc22a9 genes for solute carrier family 22
           (organic cation transporter), members 4 and 9, a
           Sin3-associated polypeptide 18 (Sap18) pseudogene, a
           pseudogene similar to part of solute carrier family 22
           (organic cation transporter), member 4 Slc22a4 and two
           CpG islands, complete sequence
          Length = 171301

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 175 ttttcatttctctacatacatacag 199
           ||||||||| |||||||||||||||
Sbjct: 402 ttttcatttttctacatacatacag 426
to top
>dbj|AB208007.1| Oryzias latipes gene for hoxC8a, complete cds
          Length = 1829

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 460  cctcggcttctgcctcagcatcccc 484
            ||||||||||||||||||| |||||
Sbjct: 1752 cctcggcttctgcctcagcctcccc 1728
to top
>dbj|AB232922.1| Oryzias latipes hox gene cluster, complete cds, contains hoxCa
          Length = 238642

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 460    cctcggcttctgcctcagcatcccc 484
              ||||||||||||||||||| |||||
Sbjct: 105969 cctcggcttctgcctcagcctcccc 105993
to top
>gb|AC154835.3| Mus musculus BAC clone RP24-573N16 from chromosome 13, complete sequence
          Length = 166266

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 175    ttttcatttctctacatacatacag 199
              ||||||||| |||||||||||||||
Sbjct: 141049 ttttcatttttctacatacatacag 141073
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                    
Query: 308     ctggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccagctcca 360
               ||||| ||||| ||||| || ||||| || ||||| ||||| |||||||||||
Sbjct: 8503752 ctggcaatgtgaccgtaagccgcctctgtcaggtgaatgccatcccagctcca 8503700
to top
>ref|XM_217901.3| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5730409F24
           (predicted) (LOC308178), mRNA
          Length = 1095

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 430 cacccccacgcccggcgcccc 450
           |||||||||||||||||||||
Sbjct: 560 cacccccacgcccggcgcccc 580
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>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0011N12
          Length = 158586

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                   
Query: 308    ctggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccagctcca 360
              ||||| ||||| ||||| || ||||| || ||||| ||||| |||||||||||
Sbjct: 156602 ctggcaatgtgaccgtaagccgcctctgtcaggtgaatgccatcccagctcca 156550
to top
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1113_G05
          Length = 131445

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                  
Query: 308   ctggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccagctcca 360
             ||||| ||||| ||||| || ||||| || ||||| ||||| |||||||||||
Sbjct: 53022 ctggcaatgtgaccgtaagccgcctctgtcaggtgaatgccatcccagctcca 52970
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>dbj|AK070671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056M20, full
            insert sequence
          Length = 3220

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                 
Query: 308  ctggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccagctcca 360
            ||||| ||||| ||||| || ||||| || ||||| ||||| |||||||||||
Sbjct: 2898 ctggcaatgtgaccgtaagccgcctctgtcaggtgaatgccatcccagctcca 2846
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>emb|CT963110.1| Medicago truncatula chromosome 5 clone mth2-64f16, COMPLETE SEQUENCE
          Length = 109924

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 105   aattaataacaatgaattaat 125
             |||||||||||||||||||||
Sbjct: 86990 aattaataacaatgaattaat 86970
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>dbj|AK061300.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E12, full
           insert sequence
          Length = 1100

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 308 ctggcgatgtggccgtaggctgcctccgtgaggtggatgccgtcccagctcca 360
           ||||| ||||| ||||| || ||||| || ||||| ||||| |||||||||||
Sbjct: 778 ctggcaatgtgaccgtaagccgcctctgtcaggtgaatgccatcccagctcca 726
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>gb|AC109197.9| Mus musculus chromosome 1, clone RP23-309A8, complete sequence
          Length = 255342

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 175   ttttcatttctctacatacatacag 199
             ||||||||| |||||||||||||||
Sbjct: 54610 ttttcatttttctacatacatacag 54634
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>emb|BX005269.4| Zebrafish DNA sequence from clone CH211-160L17 in linkage group 2,
              complete sequence
          Length = 185170

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 410    gacgtcaggttgaagttgtac 430
              |||||||||||||||||||||
Sbjct: 105220 gacgtcaggttgaagttgtac 105200
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>gb|AC130926.4| Rattus norvegicus  BAC CH230-39O11 (Children's Hospital Oakland Research
              Institute Rat (BN/SsNHsd/MCW) BAC library) complete
              sequence
          Length = 217219

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 175    ttttcatttctctacatacatacag 199
              ||||||||| |||||||||||||||
Sbjct: 135650 ttttcatttttctacatacatacag 135626
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>emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11, COMPLETE SEQUENCE
          Length = 107624

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 105  aattaataacaatgaattaat 125
            |||||||||||||||||||||
Sbjct: 1835 aattaataacaatgaattaat 1815
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>gb|AC102764.12| Mus musculus chromosome 8, clone RP24-266L17, complete sequence
          Length = 185178

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 175    ttttcatttctctacatacatacag 199
              ||||||||| |||||||||||||||
Sbjct: 164592 ttttcatttttctacatacatacag 164616
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>emb|AL731823.19| Mouse DNA sequence from clone RP23-60B2 on chromosome X, complete
             sequence
          Length = 102565

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 175   ttttcatttctctacatacatacag 199
             ||||||||| |||||||||||||||
Sbjct: 14517 ttttcatttttctacatacatacag 14541
to top
>emb|AL732396.11| Mouse DNA sequence from clone RP23-93M14 on chromosome X, complete
              sequence
          Length = 173254

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 175    ttttcatttctctacatacatacag 199
              ||||||||| |||||||||||||||
Sbjct: 119609 ttttcatttttctacatacatacag 119585
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>dbj|AB026965.1| Oryzias latipes mRNA for HOXC8A, partial cds
          Length = 398

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 460 cctcggcttctgcctcagcatcccc 484
           ||||||||||||||||||| |||||
Sbjct: 173 cctcggcttctgcctcagcctcccc 149
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>gb|AC164170.7| Mus musculus 10 BAC RP24-419C12 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 158496

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 187    tacatacatacagtaacccatgtg 210
              |||||||||||||||| |||||||
Sbjct: 111130 tacatacatacagtaaaccatgtg 111107
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 161     ttttctttgactcgttttca 180
               ||||||||||||||||||||
Sbjct: 2595498 ttttctttgactcgttttca 2595517
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>gb|AY618698.1| Avena prostrata strain CC7060 beta-amyrin synthase gene, complete
           cds
          Length = 2274

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 gtacgcaaaaaacaaccctc 240
           ||||||||||||||||||||
Sbjct: 198 gtacgcaaaaaacaaccctc 217
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>gb|AE002107.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 8 of 59 of the
            complete genome
          Length = 13180

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 106  attaataacaatgaattaat 125
            ||||||||||||||||||||
Sbjct: 3565 attaataacaatgaattaat 3584
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>gb|AC099934.14| Mus musculus chromosome 12, clone RP23-17K9, complete sequence
          Length = 234795

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    ttttcatttctctacataca 194
              ||||||||||||||||||||
Sbjct: 226422 ttttcatttctctacataca 226441
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>gb|AC115810.17| Mus musculus chromosome 16, clone RP23-417P10, complete sequence
          Length = 221406

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   ttttcatttctctacataca 194
             ||||||||||||||||||||
Sbjct: 17575 ttttcatttctctacataca 17594
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>gb|AC129773.4| Mus musculus BAC clone RP24-73D4 from chromosome 19, complete sequence
          Length = 218771

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   ttttcatttctctacataca 194
             ||||||||||||||||||||
Sbjct: 21781 ttttcatttctctacataca 21762
to top
>emb|CR354562.12| Zebrafish DNA sequence from clone DKEY-25B23 in linkage group 23,
             complete sequence
          Length = 201764

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    aaagatcacagacataacca 105
             ||||||||||||||||||||
Sbjct: 10455 aaagatcacagacataacca 10474
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>emb|CR724248.2|CNS0GLRY Tetraodon nigroviridis full-length cDNA
          Length = 1191

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 353 cagctccagtggttggacgg 372
           ||||||||||||||||||||
Sbjct: 838 cagctccagtggttggacgg 819
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>gb|AC114652.7| Mus musculus chromosome 18, clone RP24-156O17, complete sequence
          Length = 148737

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   catgcatgtgtgttcttttc 165
             ||||||||||||||||||||
Sbjct: 54420 catgcatgtgtgttcttttc 54439
to top
>ref|XM_788802.1| PREDICTED: Strongylocentrotus purpuratus similar to abnormal
            CHEmotaxis CHE-11, putative protein, with a coiled coil-4
            domain, of eukaryotic origin (che-11) (LOC589151), mRNA
          Length = 3411

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 106  attaataacaatgaattaat 125
            ||||||||||||||||||||
Sbjct: 2734 attaataacaatgaattaat 2715
to top
>gb|AY158230.1| Mus musculus strain 129/SvJ chromosome 10 clone 10A1 unknown genomic
             sequence
          Length = 77891

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 187   tacatacatacagtaacccatgtg 210
             |||||||||||||||| |||||||
Sbjct: 45954 tacatacatacagtaaaccatgtg 45931
to top
>gb|AC129312.6| Mus musculus BAC clone RP24-405K6 from chromosome 1, complete sequence
          Length = 197135

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 130    acagcacagcacaagacatgcatgtgtg 157
              |||||||||||||| |||| ||||||||
Sbjct: 127247 acagcacagcacaacacatccatgtgtg 127274
to top
>gb|AC117388.3| Homo sapiens 3 BAC RP11-22C21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 53800

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cagacataaccaattaataa 113
             ||||||||||||||||||||
Sbjct: 19411 cagacataaccaattaataa 19392
to top
>gb|AY171572.1|AY171569S4 Petromyzon marinus ABCB9-like TAP-family protein (ABCB9) gene, exon
           6
          Length = 725

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 119 aattaatctgcacagcacagcaca 142
           |||||||||||| |||||||||||
Sbjct: 566 aattaatctgcatagcacagcaca 543
to top
>gb|AC157822.2| Mus musculus BAC clone RP23-392J15 from chromosome 12, complete sequence
          Length = 185536

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ttttcatttctctacataca 194
              ||||||||||||||||||||
Sbjct: 165199 ttttcatttctctacataca 165180
to top
>gb|AC068039.6| Homo sapiens BAC clone RP11-703L16 from 2, complete sequence
          Length = 199514

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    attaataacaatgaattaat 125
              ||||||||||||||||||||
Sbjct: 190012 attaataacaatgaattaat 190031
to top
>gb|AC079907.25| Homo sapiens 12q BAC RP11-554E23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 184840

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   accaattaataacaatgaat 121
             ||||||||||||||||||||
Sbjct: 79096 accaattaataacaatgaat 79077
to top
>ref|XM_311349.2| Anopheles gambiae str. PEST ENSANGP00000001678 (ENSANGG00000001397),
            partial mRNA
          Length = 7146

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 273  tgggcgggtcggcgaagggc 292
            ||||||||||||||||||||
Sbjct: 5987 tgggcgggtcggcgaagggc 6006
to top
>emb|BX004787.8| Zebrafish DNA sequence from clone DKEY-28B17 in linkage group 23,
              complete sequence
          Length = 198036

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     aaagatcacagacataacca 105
              ||||||||||||||||||||
Sbjct: 151335 aaagatcacagacataacca 151354
to top
>emb|BX005319.6| Zebrafish DNA sequence from clone DKEY-10F23, complete sequence
          Length = 225639

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 87     aagatcacagacataaccaattaataacaatg 118
              ||||| ||||| |||| |||||||||||||||
Sbjct: 208518 aagataacagatataagcaattaataacaatg 208549
to top
>gb|AC133938.4| Mus musculus BAC clone RP23-399J17 from 3, complete sequence
          Length = 208906

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    acatgcatgtgtgttctttt 164
              ||||||||||||||||||||
Sbjct: 130173 acatgcatgtgtgttctttt 130192
to top
>emb|BX005190.8| Mouse DNA sequence from clone RP23-383A22 on chromosome X, complete
              sequence
          Length = 212955

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 175    ttttcatttctctacatacataca 198
              ||||||||| ||||||||||||||
Sbjct: 142835 ttttcatttttctacatacataca 142812
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>gb|AC131724.4| Mus musculus BAC clone RP23-129E9 from 19, complete sequence
          Length = 225611

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ttttcatttctctacataca 194
              ||||||||||||||||||||
Sbjct: 225232 ttttcatttctctacataca 225213
to top
>gb|AC140407.5| Mus musculus BAC clone RP23-142K9 from chromosome unknown, complete
              sequence
          Length = 193404

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 175    ttttcatttctctacatacataca 198
              ||||||||| ||||||||||||||
Sbjct: 120616 ttttcatttttctacatacataca 120593
to top
>gb|AC117715.10| Mus musculus chromosome 7, clone RP23-62M19, complete sequence
          Length = 234594

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    attaataacaatgaattaat 125
              ||||||||||||||||||||
Sbjct: 139830 attaataacaatgaattaat 139849
to top
>gb|AC154774.2| Mus musculus BAC clone RP24-455C12 from chromosome 16, complete
             sequence
          Length = 187085

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   ttttcatttctctacataca 194
             ||||||||||||||||||||
Sbjct: 65780 ttttcatttctctacataca 65761
to top
>gb|AC171336.3| Mus musculus  BAC RP24-286O17 (Roswell Park Cancer Institute
           (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 164528

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 187 tacatacatacagtaacccatgtg 210
           |||||||||||||||| |||||||
Sbjct: 201 tacatacatacagtaaaccatgtg 178


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,056,290
Number of Sequences: 3902068
Number of extensions: 5056290
Number of successful extensions: 142457
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142120
Number of HSP's gapped (non-prelim): 337
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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