ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inh... 670 0.0
2dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhi... 434 e-118
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
4dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
5gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
7dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
8dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
10dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 56 1e-04
11dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
12dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
13dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
14dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
15dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
16dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for ... 56 1e-04
17dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
18dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
19dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
20dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
21dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 50 0.007
22ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.028
23dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
24dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
25dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
26ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.44
27gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv.... 44 0.44
28gb|AY107125.1| Zea mays PCO125117 mRNA sequence 44 0.44
29gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.8
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.8
31emb|CR661974.2|CNS0F9R0 Tetraodon nigroviridis full-length cDNA 42 1.8
32emb|AL590608.6| Human DNA sequence from clone RP11-363F12 on chr... 42 1.8
33emb|CR378665.1| Photobacterium profundum SS9; segment 3/12 42 1.8
34gb|AC129928.3| Homo sapiens chromosome 8, clone RP11-1112C19, co... 42 1.8
35emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in l... 42 1.8
36dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
37gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.8
38dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome 42 1.8
39dbj|BS000117.1| Pan troglodytes chromosome 22 clone:RP43-027E03,... 42 1.8
40dbj|AB063285.1| Homo sapiens HLCS gene for holocarboxylase synth... 42 1.8
41dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
42dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
43dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
44dbj|AP001726.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.8
45dbj|AP005362.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.8
46dbj|AP000698.1| Homo sapiens genomic DNA, chromosome 21q22.2, co... 42 1.8
47gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.9
48gb|AC150651.3| Bos taurus BAC CH240-451E16 (Children's Hospital... 40 6.9
49ref|XM_323898.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.9
50ref|XM_950893.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.9
51gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome... 40 6.9
52gb|AC185956.1| Populus trichocarpa clone Pop1-93N08, complete se... 40 6.9
53emb|CR318625.10| Zebrafish DNA sequence from clone DKEY-119A7 in... 40 6.9
54emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in... 40 6.9
55ref|XM_733178.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 6.9
56ref|XM_739283.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 6.9
57gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete se... 40 6.9
58emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in... 40 6.9
59emb|AL591503.9| Human DNA sequence from clone RP11-571E6 on chro... 40 6.9
60emb|BX855620.10| Zebrafish DNA sequence from clone DKEY-9M4 in l... 40 6.9
61emb|CR382398.1| Plasmodium falciparum chromosome 6, complete seq... 40 6.9
62emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 i... 40 6.9
63emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 i... 40 6.9
64emb|BX569788.6| Zebrafish DNA sequence from clone CH211-161N19 i... 40 6.9
65gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complet... 40 6.9
66gb|AF465311.1| Dictyostelium discoideum ABC transporter ABCA.9 (... 40 6.9
67emb|BX119984.15| Zebrafish DNA sequence from clone DKEY-257N17 i... 40 6.9
68gb|AC154693.2| Mus musculus BAC clone RP24-340P22 from chromosom... 40 6.9
69dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
70dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
71dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN... 40 6.9
72dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.9
73dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
74gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete s... 40 6.9
75dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
76dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.9
77emb|BX901933.15| Zebrafish DNA sequence from clone DKEY-114H6 in... 40 6.9
78emb|AL929231.3| Zebrafish DNA sequence from clone BUSM1-46P4, co... 40 6.9
79emb|AL928816.2| Zebrafish DNA sequence from clone BUSM1-265N4, c... 40 6.9
80emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in... 40 6.9
81gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone... 40 6.9
82emb|BX927330.9| Zebrafish DNA sequence from clone DKEY-43B14 in ... 40 6.9
83gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 fr... 40 6.9
84gb|AC004062.1|AC004062 Homo sapiens chromosome 4 clone B316M24 m... 40 6.9
85gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 6.9
86emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chro... 40 6.9 
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene)
          Length = 915

 Score =  670 bits (338), Expect = 0.0
 Identities = 377/390 (96%)
 Strand = Plus / Minus

                                                                       
Query: 123 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 915 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtatcggtccca 856

                                                                       
Query: 183 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 242
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 855 gagcatgatgccgccgtagttgtccttcttctgcgccaccggcgcgacgccgtagtagac 796

                                                                       
Query: 243 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 302
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 795 gttcttggggtgtacccactggtgggacttgtcgtccgccgtgagcccgacgtagaaccg 736

                                                                       
Query: 303 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 362
           |||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 735 ggtggccgggtacgccgccgtccacttgtcccacgagccctcccacccaaggttctggtt 676

                                                                       
Query: 363 gcacccattgtcgctctcgtatgtcctcacgtggacgcgctcgaagatccccgtcgccag 422
           |||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 675 gcaccacttgtcgctctcgtaggtcctcacgtgggcgcgctcgaagatccccgtcgccag 616

                                                                       
Query: 423 cgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtgcag 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtgcag 556

                                         
Query: 483 cggcttccccggccccccgcggatgttgtg 512
           |||||||||||| |||||||||||||||||
Sbjct: 555 cggcttccccgggcccccgcggatgttgtg 526
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>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III,
           complete cds
          Length = 934

 Score =  434 bits (219), Expect = e-118
 Identities = 350/393 (89%), Gaps = 3/393 (0%)
 Strand = Plus / Minus

                                                                       
Query: 123 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 182
           ||||||||||||||||||  |||| ||||||| | |||||||||||||||| ||||||||
Sbjct: 932 tcaggcgtagtacttgatgtagctactgtagtcgctctgcttgtcgaagtatcggtccca 873

                                                                       
Query: 183 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 242
           ||||||||  ||||||||||||||||||||||||  |||||||| || || |||||||||
Sbjct: 872 gagcatgaccccgccgtagttgtccttcttctgcaccaccggcgtgatgccgtagtagac 813

                                                                       
Query: 243 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 302
           |||||||||||||| ||||||||| ||||| ||||| || |||||||||| | |||||||
Sbjct: 812 gttcttggggtgtatccactggtacgacttctcgtcggcggtgagcccgatgaagaaccg 753

                                                                       
Query: 303 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 362
           |||||| ||||||||||||||||||  || |||||   |||||||| |   || ||||||
Sbjct: 752 ggtggccgggtacgccgccgtccacctgtcccacgcctcctcccacgccccgtactggtt 693

                                                                       
Query: 363 gcacccattgtcgct---ctcgtatgtcctcacgtggacgcgctcgaagatccccgtcgc 419
           |||| | ||||||||   ||||||  |||||||||| |||||||| ||||||||||||||
Sbjct: 692 gcacgccttgtcgctctcctcgtagatcctcacgtgcacgcgctccaagatccccgtcgc 633

                                                                       
Query: 420 cagcgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cagcgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtg 573

                                            
Query: 480 cagcggcttccccggccccccgcggatgttgtg 512
           ||||||||||||||| || ||||||||||||||
Sbjct: 572 cagcggcttccccgggccgccgcggatgttgtg 540
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                            
Query: 135      cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 194
                ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 14484656 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 14484715

                                                                            
Query: 195      gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 254
                |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 14484716 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 14484775

                       
Query: 255      tacccac 261
                 ||||||
Sbjct: 14484776 cacccac 14484782



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                                
Query: 465      cgtcgccgtcaggtgcagcggcttccccggccccccgcggatgttgtg 512
                |||||| |||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 14490283 cgtcgctgtcaggtgcagcggcttcccgggcgcgccgcggatgttgtg 14490330



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 393      gtggacgcgctcgaagatccccgtcgcca 421
                ||||| |||||||||||||||||||||||
Sbjct: 14490211 gtggatgcgctcgaagatccccgtcgcca 14490239



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 292      acgtagaaccgggtggcagggtacgccgccgtc 324
                ||||||||||| || || |||||||||||||||
Sbjct: 14484813 acgtagaaccgtgtcgccgggtacgccgccgtc 14484845
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>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                         
Query: 135   cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 194
             ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 77830 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 77889

                                                                         
Query: 195   gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 254
             |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 77890 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 77949

                    
Query: 255   tacccac 261
              ||||||
Sbjct: 77950 cacccac 77956



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 465   cgtcgccgtcaggtgcagcggcttccccggccccccgcggatgttgtg 512
             |||||| |||||||||||||||||||| ||| | ||||||||||||||
Sbjct: 83457 cgtcgctgtcaggtgcagcggcttcccgggcgcgccgcggatgttgtg 83504



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 393   gtggacgcgctcgaagatccccgtcgcca 421
             ||||| |||||||||||||||||||||||
Sbjct: 83385 gtggatgcgctcgaagatccccgtcgcca 83413



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 292   acgtagaaccgggtggcagggtacgccgccgtc 324
             ||||||||||| || || |||||||||||||||
Sbjct: 77987 acgtagaaccgtgtcgccgggtacgccgccgtc 78019
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0022E16 map C481S, complete sequence
          Length = 179668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 156   ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
             ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 82293 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 82246



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 162   cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
             ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 88121 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 88163



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 386   tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
             |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 64128 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 64088



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 164   tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
             |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 83663 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 83703



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 386   tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
             ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 58277 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 58237
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 156      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28123738 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28123691



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 162      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28129566 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28129608



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 386      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
                |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 28105573 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 28105533



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 164      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28125108 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28125148



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 386      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
                ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 28099010 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 28098970
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>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full
           insert sequence
          Length = 1176

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 156 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 988 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 941
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>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full
           insert sequence
          Length = 1234

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 156 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 989 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 942
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 156      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28108616 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28108569



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 162      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28114444 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28114486



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 386      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
                |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 28090451 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 28090411



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 164      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28109986 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28110026



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 386      tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
                ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 28083888 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 28083848
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>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1220

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 156 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 963 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 916
to top
>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C60571
          Length = 1220

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 156 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 975 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 928
to top
>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C11701
          Length = 1171

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 156 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 933 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 886
to top
>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C12269
          Length = 1214

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 156 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 973 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 926
to top
>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C3540
          Length = 1229

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 156 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 972 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 925
to top
>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds,clone:C10295
          Length = 1199

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 156 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 954 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 907
to top
>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase
           homologue (OsChib3H-a)H-, complete cds, clone:C60129
          Length = 1187

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 156 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 203
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 957 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 910
to top
>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full
           insert sequence
          Length = 1162

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 162 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 927 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 885
to top
>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full
           insert sequence
          Length = 1193

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 162 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 931 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 889
to top
>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full
           insert sequence
          Length = 1153

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 162 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 918 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 876
to top
>dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E05, full
           insert sequence
          Length = 1076

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 386 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
           |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 695 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 655
to top
>dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1145

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 386 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
           |||||||||||| |||| |||| | ||||||||||||||||
Sbjct: 673 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 633
to top
>ref|NM_193094.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 951

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 158 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 217
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 916 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 857

                   
Query: 218 acaccggc 225
           || |||||
Sbjct: 856 actccggc 849



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 390 cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 429
           |||||||||||||||||||   ||||| || |||||||||
Sbjct: 654 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 615
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                            
Query: 158      tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 217
                |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 26162477 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 26162418

                        
Query: 218      acaccggc 225
                || |||||
Sbjct: 26162417 actccggc 26162410



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                        
Query: 390      cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 429
                |||||||||||||||||||   ||||| || |||||||||
Sbjct: 26162215 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 26162176
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>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full
           insert sequence
          Length = 1165

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 158 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 217
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 964 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 905

                   
Query: 218 acaccggc 225
           || |||||
Sbjct: 904 actccggc 897



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 390 cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 429
           |||||||||||||||||||   ||||| || |||||||||
Sbjct: 702 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 663
to top
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 158   tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 217
             |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 54335 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 54276

                     
Query: 218   acaccggc 225
             || |||||
Sbjct: 54275 actccggc 54268



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 390   cacgtggacgcgctcgaagatccccgtcgccagcgcccgc 429
             |||||||||||||||||||   ||||| || |||||||||
Sbjct: 54073 cacgtggacgcgctcgaaggcgcccgtggcgagcgcccgc 54034
to top
>ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus similar to putative
           endoplasmic reticulum protein, with at least 5
           transmembrane domains, of eukaryotic origin (56.3 kD)
           (4P439) (LOC592817), mRNA
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 145 ctgctgtagttggtctgcttgt 166
           ||||||||||||||||||||||
Sbjct: 86  ctgctgtagttggtctgcttgt 107
to top
>gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv. INRA 258,
           mercuric chloride-treated, leaves, mRNA Partial, 945 nt]
          Length = 945

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 175 cggtcccagagcatgatgccgccgtagttg 204
           |||||||| | |||||||||||||||||||
Sbjct: 870 cggtcccacaccatgatgccgccgtagttg 841
to top
>gb|AY107125.1| Zea mays PCO125117 mRNA sequence
          Length = 1252

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 175 cggtcccagagcatgatgccgccgtagttg 204
           |||||||| | |||||||||||||||||||
Sbjct: 928 cggtcccacaccatgatgccgccgtagttg 899
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 405    gaagatccccgtcgccagcgc 425
              |||||||||||||||||||||
Sbjct: 765298 gaagatccccgtcgccagcgc 765318
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 16      attattatttttatttatcca 36
               |||||||||||||||||||||
Sbjct: 9296566 attattatttttatttatcca 9296586
to top
>emb|CR661974.2|CNS0F9R0 Tetraodon nigroviridis full-length cDNA
          Length = 1323

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   tattatttttatttatccaag 38
            |||||||||||||||||||||
Sbjct: 1059 tattatttttatttatccaag 1079
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>emb|AL590608.6| Human DNA sequence from clone RP11-363F12 on chromosome 6, complete
             sequence
          Length = 200337

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    attattatttttatttatcca 36
             |||||||||||||||||||||
Sbjct: 75724 attattatttttatttatcca 75704
to top
>emb|CR378665.1| Photobacterium profundum SS9; segment 3/12
          Length = 347213

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    attattatttttatttatcca 36
             |||||||||||||||||||||
Sbjct: 55388 attattatttttatttatcca 55368
to top
>gb|AC129928.3| Homo sapiens chromosome 8, clone RP11-1112C19, complete sequence
          Length = 141478

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 14     caattattatttttatttatc 34
              |||||||||||||||||||||
Sbjct: 106374 caattattatttttatttatc 106394
to top
>emb|BX537141.17| Zebrafish DNA sequence from clone DKEY-9E8 in linkage group 2, complete
              sequence
          Length = 264534

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 16     attattatttttatttatccaagta 40
              |||||||||||||||||| ||||||
Sbjct: 242608 attattatttttatttattcaagta 242584
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 16      attattatttttatttatcca 36
               |||||||||||||||||||||
Sbjct: 9294399 attattatttttatttatcca 9294419
to top
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0014A21, from chromosome 3, complete sequence
          Length = 134014

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 16    attattatttttatttatcca 36
             |||||||||||||||||||||
Sbjct: 59687 attattatttttatttatcca 59667
to top
>dbj|BA000011.4| Thermoplasma volcanium GSS1 DNA, complete genome
          Length = 1584804

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 12     ttcaattattatttttattta 32
              |||||||||||||||||||||
Sbjct: 956438 ttcaattattatttttattta 956458
to top
>dbj|BS000117.1| Pan troglodytes chromosome 22 clone:RP43-027E03, map 22, complete
             sequences
          Length = 155641

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    tcaattattatttttatttat 33
             |||||||||||||||||||||
Sbjct: 82472 tcaattattatttttatttat 82492
to top
>dbj|AB063285.1| Homo sapiens HLCS gene for holocarboxylase synthetase, complete cds
          Length = 250000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     tcaattattatttttatttat 33
              |||||||||||||||||||||
Sbjct: 217230 tcaattattatttttatttat 217210
to top
>dbj|AK102731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105P15, full
           insert sequence
          Length = 1008

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 386 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
           ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 612 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 572
to top
>dbj|AK064356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-B03, full
           insert sequence
          Length = 1150

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 386 tcctcacgtggacgcgctcgaagatccccgtcgccagcgcc 426
           ||||||| |||| |||| |||| | ||||||||||||||||
Sbjct: 659 tcctcacatggatgcgcgcgaacacccccgtcgccagcgcc 619
to top
>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full
           insert sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 164 tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 204
           |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 940 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 900
to top
>dbj|AP001726.1| Homo sapiens genomic DNA, chromosome 21q, section 70/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     tcaattattatttttatttat 33
              |||||||||||||||||||||
Sbjct: 335682 tcaattattatttttatttat 335702
to top
>dbj|AP005362.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1574E2, complete
              sequence
          Length = 219049

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 14     caattattatttttatttatc 34
              |||||||||||||||||||||
Sbjct: 147526 caattattatttttatttatc 147506
to top
>dbj|AP000698.1| Homo sapiens genomic DNA, chromosome 21q22.2, cosmid clone:D8F6,
             CBR1-HLCS region
          Length = 39159

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    tcaattattatttttatttat 33
             |||||||||||||||||||||
Sbjct: 21346 tcaattattatttttatttat 21366
to top
>gb|AC104270.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1037_G10,
             complete sequence
          Length = 181130

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 391   acgtggacgcgctcgaagatccccgtcgccagcgcc 426
             ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 94040 acgtggatgcggtggaagagccccgtcgccagcgcc 94005



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 391   acgtggacgcgctcgaagatccccgtcgccagcgcc 426
             ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 71656 acgtggatgcggtggaagagccccgtcgccagcgcc 71621
to top
>gb|AC150651.3| Bos taurus  BAC CH240-451E16 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 174648

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 16    attattatttttatttatccaagt 39
             |||||||||||||||||| |||||
Sbjct: 12410 attattatttttatttattcaagt 12387
to top
>ref|XM_323898.1| Neurospora crassa OR74A hypothetical protein (NCU04546.1) partial
            mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 413  ccgtcgccagcgcccgcccc 432
            ||||||||||||||||||||
Sbjct: 1232 ccgtcgccagcgcccgcccc 1251
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>ref|XM_950893.1| Neurospora crassa OR74A hypothetical protein (NCU04546.1) partial
            mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 413  ccgtcgccagcgcccgcccc 432
            ||||||||||||||||||||
Sbjct: 1232 ccgtcgccagcgcccgcccc 1251
to top
>gb|AC159638.2| Mus musculus BAC clone RP24-78C16 from chromosome 12, complete sequence
          Length = 190196

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ttcaattattatttttattt 31
             ||||||||||||||||||||
Sbjct: 37564 ttcaattattatttttattt 37545
to top
>gb|AC185956.1| Populus trichocarpa clone Pop1-93N08, complete sequence
          Length = 73786

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aattattatttttatttatc 34
             ||||||||||||||||||||
Sbjct: 35552 aattattatttttatttatc 35533
to top
>emb|CR318625.10| Zebrafish DNA sequence from clone DKEY-119A7 in linkage group 17,
              complete sequence
          Length = 142057

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ttcaattattatttttattt 31
              ||||||||||||||||||||
Sbjct: 125089 ttcaattattatttttattt 125070
to top
>emb|CR388121.11| Zebrafish DNA sequence from clone DKEY-161F5 in linkage group 15,
             complete sequence
          Length = 179357

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    ttattatttttatttatcca 36
             ||||||||||||||||||||
Sbjct: 12184 ttattatttttatttatcca 12165
to top
>ref|XM_733178.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000260.02.0)
           partial mRNA
          Length = 234

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  aattattatttttatttatc 34
           ||||||||||||||||||||
Sbjct: 232 aattattatttttatttatc 213
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>ref|XM_739283.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000521.03.0)
           partial mRNA
          Length = 471

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  tgttcaattattatttttatttat 33
           |||| |||||||||||||||||||
Sbjct: 156 tgttaaattattatttttatttat 133
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>gb|AC121238.17| Medicago truncatula clone mth2-34p9, complete sequence
          Length = 104878

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    attattatttttatttatcc 35
             ||||||||||||||||||||
Sbjct: 98119 attattatttttatttatcc 98138
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>emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in linkage group 1,
              complete sequence
          Length = 163635

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     ttcaattattatttttattt 31
              ||||||||||||||||||||
Sbjct: 118265 ttcaattattatttttattt 118284
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>emb|AL591503.9| Human DNA sequence from clone RP11-571E6 on chromosome Xp11.22-11.3
              Contains a nicolin 1 (NICN1) pseudogene, a novel gene, the
              5'end of the ZNF157 gene for zinc finger protein 157
              (HZF22) and a UBX domain containing 2 (UBXD2) pseudogene,
              complete sequence
          Length = 152659

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     caattattatttttatttat 33
              ||||||||||||||||||||
Sbjct: 121322 caattattatttttatttat 121341
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>emb|BX855620.10| Zebrafish DNA sequence from clone DKEY-9M4 in linkage group 15,
             complete sequence
          Length = 33169

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aattattatttttatttatc 34
             ||||||||||||||||||||
Sbjct: 19986 aattattatttttatttatc 19967
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>emb|CR382398.1| Plasmodium falciparum chromosome 6, complete sequence; segment 1/5
          Length = 349418

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     ttcaattattatttttattt 31
              ||||||||||||||||||||
Sbjct: 132191 ttcaattattatttttattt 132210
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>emb|BX950184.7| Zebrafish DNA sequence from clone CH211-103O12 in linkage group 12,
             complete sequence
          Length = 150475

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    tgttcaattattatttttat 29
             ||||||||||||||||||||
Sbjct: 97242 tgttcaattattatttttat 97223
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>emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 in linkage group 7
             Contains three CpG islands, complete sequence
          Length = 110786

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    caatacatcagaatcaaatc 87
             ||||||||||||||||||||
Sbjct: 43424 caatacatcagaatcaaatc 43405
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>emb|BX569788.6| Zebrafish DNA sequence from clone CH211-161N19 in linkage group 10,
             complete sequence
          Length = 162115

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    tcaattattatttttattta 32
             ||||||||||||||||||||
Sbjct: 25547 tcaattattatttttattta 25566
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>gb|AC104137.5| Homo sapiens BAC clone RP11-807H7 from 4, complete sequence
          Length = 195930

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 15     aattattatttttatttatc 34
              ||||||||||||||||||||
Sbjct: 126479 aattattatttttatttatc 126460
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>gb|AF465311.1| Dictyostelium discoideum ABC transporter ABCA.9 (abca9) gene, partial
            cds
          Length = 4234

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   ttcaattattatttttattt 31
            ||||||||||||||||||||
Sbjct: 4043 ttcaattattatttttattt 4024
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>emb|BX119984.15| Zebrafish DNA sequence from clone DKEY-257N17 in linkage group 1,
             complete sequence
          Length = 163978

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tgttcaattattatttttat 29
             ||||||||||||||||||||
Sbjct: 15731 tgttcaattattatttttat 15750
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>gb|AC154693.2| Mus musculus BAC clone RP24-340P22 from chromosome 14, complete
             sequence
          Length = 182996

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 15    aattattatttttatttatccaagtaca 42
             |||||||||||||| || ||||||||||
Sbjct: 98061 aattattatttttaattttccaagtaca 98088
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 413      ccgtcgccagcgcccgcccc 432
                ||||||||||||||||||||
Sbjct: 20419457 ccgtcgccagcgcccgcccc 20419438
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 391     acgtggacgcgctcgaagatccccgtcgccagcgcc 426
               ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 8882115 acgtggatgcggtggaagagccccgtcgccagcgcc 8882080



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                   
Query: 391     acgtggacgcgctcgaagatccccgtcgccagcgcc 426
               ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 8859731 acgtggatgcggtggaagagccccgtcgccagcgcc 8859696
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>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence
          Length = 94287

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 183   gagcatgatgccgccgtagttgtccttc 210
             ||||||||||| |||| |||||||||||
Sbjct: 66383 gagcatgatgcggccggagttgtccttc 66356
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     ttctgcgacaccggcgcgac 230
               ||||||||||||||||||||
Sbjct: 5735197 ttctgcgacaccggcgcgac 5735178
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>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 413   ccgtcgccagcgcccgcccc 432
             ||||||||||||||||||||
Sbjct: 47596 ccgtcgccagcgcccgcccc 47577
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>gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete sequence
          Length = 157625

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     ccaactgttcaattattattttta 28
             ||||||||| ||||||||||||||
Sbjct: 93027 ccaactgttaaattattattttta 93004
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>dbj|AK073843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068H05, full
           insert sequence
          Length = 1152

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 391 acgtggacgcgctcgaagatccccgtcgccagcgcc 426
           ||||||| ||| | ||||| ||||||||||||||||
Sbjct: 682 acgtggatgcggtggaagagccccgtcgccagcgcc 647
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>dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043K12, full
           insert sequence
          Length = 2098

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 413 ccgtcgccagcgcccgcccc 432
           ||||||||||||||||||||
Sbjct: 233 ccgtcgccagcgcccgcccc 252
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>emb|BX901933.15| Zebrafish DNA sequence from clone DKEY-114H6 in linkage group 22,
             complete sequence
          Length = 42656

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 17    ttattatttttatttatccaagta 40
             ||||||||||| ||||||||||||
Sbjct: 17692 ttattatttttttttatccaagta 17715
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>emb|AL929231.3| Zebrafish DNA sequence from clone BUSM1-46P4, complete sequence
          Length = 85305

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tgttcaattattatttttat 29
             ||||||||||||||||||||
Sbjct: 73280 tgttcaattattatttttat 73299
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>emb|AL928816.2| Zebrafish DNA sequence from clone BUSM1-265N4, complete sequence
          Length = 98918

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    tgttcaattattatttttat 29
             ||||||||||||||||||||
Sbjct: 33614 tgttcaattattatttttat 33633
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>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1, complete
              sequence
          Length = 167207

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     ttcaattattatttttattt 31
              ||||||||||||||||||||
Sbjct: 137407 ttcaattattatttttattt 137426
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>gb|AC079959.25| Mus musculus strain C57BL/6J chromosome 12 clone rp23-327i21, complete
             sequence
          Length = 218889

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ttcaattattatttttattt 31
             ||||||||||||||||||||
Sbjct: 18723 ttcaattattatttttattt 18742
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>emb|BX927330.9| Zebrafish DNA sequence from clone DKEY-43B14 in linkage group 2,
             complete sequence
          Length = 203149

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    aattattatttttatttatc 34
             ||||||||||||||||||||
Sbjct: 33340 aattattatttttatttatc 33321
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>gb|AC160641.2| Ornithorhynchus anatinus BAC clone OABb-469P24 from chromosome unknown,
             complete sequence
          Length = 128941

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 19    attatttttatttatccaagtaca 42
             ||||| ||||||||||||||||||
Sbjct: 66721 attatctttatttatccaagtaca 66744
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>gb|AC004062.1|AC004062 Homo sapiens chromosome 4 clone B316M24 map 4q25, complete sequence
          Length = 154252

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ttcaattattatttttattt 31
             ||||||||||||||||||||
Sbjct: 20307 ttcaattattatttttattt 20288
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 408     gatccccgtcgccagcgccc 427
               ||||||||||||||||||||
Sbjct: 1274939 gatccccgtcgccagcgccc 1274920
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>emb|BX088567.6| Mouse DNA sequence from clone RP23-21L20 on chromosome X, complete
             sequence
          Length = 150122

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    ttattatttttatttatcca 36
             ||||||||||||||||||||
Sbjct: 84264 ttattatttttatttatcca 84245


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,263,728
Number of Sequences: 3902068
Number of extensions: 4263728
Number of successful extensions: 148498
Number of sequences better than 10.0: 86
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147759
Number of HSP's gapped (non-prelim): 735
length of query: 512
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 489
effective length of database: 17,143,297,704
effective search space: 8383072577256
effective search space used: 8383072577256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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