ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart25b02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 |||||||||| |||||||| || |||||||||||||| || | | ||||||| ||||| Sbjct: 5924352 acggcatcgatcacctcgacggcgaagcggcaccggttctcgaggttgccaccgtactcg 5924411 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | |||||| |||| || ||| || | ||| ||| Sbjct: 5924412 tcggtgcggtcgttggcgctgtccttcatgaactggtcgaggaggtagccgtgcgcgcca 5924471 Query: 412 tggatctccacgccgtc 428 ||||||||||||||||| Sbjct: 5924472 tggatctccacgccgtc 5924488 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | ||||||||| ||||| Sbjct: 5929615 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccaccgtactcg 5929674 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | ||||||||| | || ||| || | ||| ||| Sbjct: 5929675 tcggtgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtgcgcgcca 5929734 Query: 412 tggatctccacgccgtc 428 || |||||||||||||| Sbjct: 5929735 tgaatctccacgccgtc 5929751 Score = 87.7 bits (44), Expect = 3e-14 Identities = 131/160 (81%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 5896075 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 5896134 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||||||||||| || ||| || || || || Sbjct: 5896135 tcggtgcggtcgttggagctgtccttcatgaactgctcgaggaggtagccgttggcgccg 5896194 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||||||||||||||||| || ||||| || || ||||||| Sbjct: 5896195 tggatctccacgccgtcgaacccggcctcgatggcgttcc 5896234 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Plus Query: 225 gcagtccatgtagtcggtgaagggagagaggcggatgcccacacggtggccaccaacctc 284 ||||||||| |||||| |||| || || || | ||| ||||||||||| | |||||||| Sbjct: 5906225 gcagtccatatagtcgatgaacggtgacagcctgatccccacacggtgcgctccaacctc 5906284 Query: 285 cttcacaacggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccacc 344 || | ||| |||| |||||||| | | |||||||||||||| || | ||||||||| Sbjct: 5906285 ggcgacgatggcgtcgatcacctcgacaacgaagcggcaccggttctcgaggctgccacc 5906344 Query: 345 atactcatcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccatt 404 ||||| ||| ||||||| || || |||||||| | ||||||||| | || ||| || | Sbjct: 5906345 gtactcgtcgctgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtg 5906404 Query: 405 cgccccatggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||| || ||||||||||||||||| || ||||| || || ||||||| Sbjct: 5906405 cgcgccgtggatctccacgccgtcgaacccggcctcgatggcgttcc 5906451 Score = 79.8 bits (40), Expect = 8e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 5890086 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 5890145 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||| ||||||| || ||| || ||||| || Sbjct: 5890146 tcggtgcggtcgttggagctgtccttcatgaattgctcgaggaggtagccgttcgcgccg 5890205 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcctggccgccttcctgaaatca 471 |||||||| || ||||| || ||||| || | ||||||||||| || ||||||||| Sbjct: 5890206 tggatctcaacaccgtcgaacccggcctcgactgcgttcctggcagcgagcctgaaatcg 5890265 Query: 472 tcgacgat 479 |||||||| Sbjct: 5890266 tcgacgat 5890273 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||| ||||| || | ||||||||| |||| Sbjct: 5910858 acggcgtcgatcacctcgacggcgaagcggcaacggttctcgaggctgccaccgtactgg 5910917 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||| ||| | || || |||||||| | |||||| ||||||| ||| |||| ||| || Sbjct: 5910918 tcggtccggccgttggcgctgtccttcatgaactgatcgatgaggtagccatgcgcgccg 5910977 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcctggccgccttcctgaaatca 471 ||||||||||||||||| || || || || || ||||||| || ||| ||||||||| Sbjct: 5910978 tggatctccacgccgtcgaaccccgcctcgatggcgttccgcgcagccaccctgaaatcg 5911037 Query: 472 tcgacga 478 ||||||| Sbjct: 5911038 tcgacga 5911044 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 122 cgacgatggccatcctcggctcgaccatgtg 152 ||||| |||||||||||||||| |||||||| Sbjct: 5910685 cgacggtggccatcctcggctccaccatgtg 5910715
>dbj|AP004741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0024N18 Length = 128739 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 |||||||||| |||||||| || |||||||||||||| || | | ||||||| ||||| Sbjct: 46004 acggcatcgatcacctcgacggcgaagcggcaccggttctcgaggttgccaccgtactcg 46063 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | |||||| |||| || ||| || | ||| ||| Sbjct: 46064 tcggtgcggtcgttggcgctgtccttcatgaactggtcgaggaggtagccgtgcgcgcca 46123 Query: 412 tggatctccacgccgtc 428 ||||||||||||||||| Sbjct: 46124 tggatctccacgccgtc 46140 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | ||||||||| ||||| Sbjct: 51267 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccaccgtactcg 51326 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | ||||||||| | || ||| || | ||| ||| Sbjct: 51327 tcggtgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtgcgcgcca 51386 Query: 412 tggatctccacgccgtc 428 || |||||||||||||| Sbjct: 51387 tgaatctccacgccgtc 51403 Score = 87.7 bits (44), Expect = 3e-14 Identities = 131/160 (81%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 17727 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 17786 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||||||||||| || ||| || || || || Sbjct: 17787 tcggtgcggtcgttggagctgtccttcatgaactgctcgaggaggtagccgttggcgccg 17846 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||||||||||||||||| || ||||| || || ||||||| Sbjct: 17847 tggatctccacgccgtcgaacccggcctcgatggcgttcc 17886 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Plus Query: 225 gcagtccatgtagtcggtgaagggagagaggcggatgcccacacggtggccaccaacctc 284 ||||||||| |||||| |||| || || || | ||| ||||||||||| | |||||||| Sbjct: 27877 gcagtccatatagtcgatgaacggtgacagcctgatccccacacggtgcgctccaacctc 27936 Query: 285 cttcacaacggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccacc 344 || | ||| |||| |||||||| | | |||||||||||||| || | ||||||||| Sbjct: 27937 ggcgacgatggcgtcgatcacctcgacaacgaagcggcaccggttctcgaggctgccacc 27996 Query: 345 atactcatcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccatt 404 ||||| ||| ||||||| || || |||||||| | ||||||||| | || ||| || | Sbjct: 27997 gtactcgtcgctgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtg 28056 Query: 405 cgccccatggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||| || ||||||||||||||||| || ||||| || || ||||||| Sbjct: 28057 cgcgccgtggatctccacgccgtcgaacccggcctcgatggcgttcc 28103 Score = 79.8 bits (40), Expect = 8e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 11738 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 11797 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||| ||||||| || ||| || ||||| || Sbjct: 11798 tcggtgcggtcgttggagctgtccttcatgaattgctcgaggaggtagccgttcgcgccg 11857 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcctggccgccttcctgaaatca 471 |||||||| || ||||| || ||||| || | ||||||||||| || ||||||||| Sbjct: 11858 tggatctcaacaccgtcgaacccggcctcgactgcgttcctggcagcgagcctgaaatcg 11917 Query: 472 tcgacgat 479 |||||||| Sbjct: 11918 tcgacgat 11925 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||| ||||| || | ||||||||| |||| Sbjct: 32510 acggcgtcgatcacctcgacggcgaagcggcaacggttctcgaggctgccaccgtactgg 32569 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||| ||| | || || |||||||| | |||||| ||||||| ||| |||| ||| || Sbjct: 32570 tcggtccggccgttggcgctgtccttcatgaactgatcgatgaggtagccatgcgcgccg 32629 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcctggccgccttcctgaaatca 471 ||||||||||||||||| || || || || || ||||||| || ||| ||||||||| Sbjct: 32630 tggatctccacgccgtcgaaccccgcctcgatggcgttccgcgcagccaccctgaaatcg 32689 Query: 472 tcgacga 478 ||||||| Sbjct: 32690 tcgacga 32696 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 122 cgacgatggccatcctcggctcgaccatgtg 152 ||||| |||||||||||||||| |||||||| Sbjct: 32337 cgacggtggccatcctcggctccaccatgtg 32367
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 97.6 bits (49), Expect = 3e-17 Identities = 115/137 (83%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 |||||||||| |||||||| || |||||||||||||| || | | ||||||| ||||| Sbjct: 125127 acggcatcgatcacctcgacggcgaagcggcaccggttctcgaggttgccaccgtactcg 125186 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | |||||| |||| || ||| || | ||| ||| Sbjct: 125187 tcggtgcggtcgttggcgctgtccttcatgaactggtcgaggaggtagccgtgcgcgcca 125246 Query: 412 tggatctccacgccgtc 428 ||||||||||||||||| Sbjct: 125247 tggatctccacgccgtc 125263 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | ||||||||| ||||| Sbjct: 130390 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccaccgtactcg 130449 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | ||||||||| | || ||| || | ||| ||| Sbjct: 130450 tcggtgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtgcgcgcca 130509 Query: 412 tggatctccacgccgtc 428 || |||||||||||||| Sbjct: 130510 tgaatctccacgccgtc 130526 Score = 87.7 bits (44), Expect = 3e-14 Identities = 131/160 (81%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 96850 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 96909 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||||||||||| || ||| || || || || Sbjct: 96910 tcggtgcggtcgttggagctgtccttcatgaactgctcgaggaggtagccgttggcgccg 96969 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||||||||||||||||| || ||||| || || ||||||| Sbjct: 96970 tggatctccacgccgtcgaacccggcctcgatggcgttcc 97009 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Plus Query: 225 gcagtccatgtagtcggtgaagggagagaggcggatgcccacacggtggccaccaacctc 284 ||||||||| |||||| |||| || || || | ||| ||||||||||| | |||||||| Sbjct: 107000 gcagtccatatagtcgatgaacggtgacagcctgatccccacacggtgcgctccaacctc 107059 Query: 285 cttcacaacggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccacc 344 || | ||| |||| |||||||| | | |||||||||||||| || | ||||||||| Sbjct: 107060 ggcgacgatggcgtcgatcacctcgacaacgaagcggcaccggttctcgaggctgccacc 107119 Query: 345 atactcatcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccatt 404 ||||| ||| ||||||| || || |||||||| | ||||||||| | || ||| || | Sbjct: 107120 gtactcgtcgctgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtg 107179 Query: 405 cgccccatggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||| || ||||||||||||||||| || ||||| || || ||||||| Sbjct: 107180 cgcgccgtggatctccacgccgtcgaacccggcctcgatggcgttcc 107226 Score = 79.8 bits (40), Expect = 8e-12 Identities = 151/188 (80%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 90861 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 90920 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||| ||||||| || ||| || ||||| || Sbjct: 90921 tcggtgcggtcgttggagctgtccttcatgaattgctcgaggaggtagccgttcgcgccg 90980 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcctggccgccttcctgaaatca 471 |||||||| || ||||| || ||||| || | ||||||||||| || ||||||||| Sbjct: 90981 tggatctcaacaccgtcgaacccggcctcgactgcgttcctggcagcgagcctgaaatcg 91040 Query: 472 tcgacgat 479 |||||||| Sbjct: 91041 tcgacgat 91048 Score = 77.8 bits (39), Expect = 3e-11 Identities = 150/187 (80%) Strand = Plus / Plus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||| ||||| || | ||||||||| |||| Sbjct: 111633 acggcgtcgatcacctcgacggcgaagcggcaacggttctcgaggctgccaccgtactgg 111692 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||| ||| | || || |||||||| | |||||| ||||||| ||| |||| ||| || Sbjct: 111693 tcggtccggccgttggcgctgtccttcatgaactgatcgatgaggtagccatgcgcgccg 111752 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcctggccgccttcctgaaatca 471 ||||||||||||||||| || || || || || ||||||| || ||| ||||||||| Sbjct: 111753 tggatctccacgccgtcgaaccccgcctcgatggcgttccgcgcagccaccctgaaatcg 111812 Query: 472 tcgacga 478 ||||||| Sbjct: 111813 tcgacga 111819 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 122 cgacgatggccatcctcggctcgaccatgtg 152 ||||| |||||||||||||||| |||||||| Sbjct: 111460 cgacggtggccatcctcggctccaccatgtg 111490
>emb|AJ557139.1|OSA557139 Oryza sativa (japonica cultivar-group) partial mRNA for oxo-phytodienoic acid reductase (opda2 gene) Length = 1248 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | ||||||||| ||||| Sbjct: 548 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccaccgtactcg 489 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | ||||||||| | || ||| || | ||| ||| Sbjct: 488 tcggtgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtgcgcgcca 429 Query: 412 tggatctccacgccgtc 428 || |||||||||||||| Sbjct: 428 tgaatctccacgccgtc 412
>emb|AJ557138.1|OSA557138 Oryza sativa (japonica cultivar-group) mRNA for oxo-phytodienoic acid reductase (opda gene) Length = 1343 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | ||||||||| ||||| Sbjct: 704 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccaccgtactcg 645 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | ||||||||| | || ||| || | ||| ||| Sbjct: 644 tcggtgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtgcgcgcca 585 Query: 412 tggatctccacgccgtc 428 || |||||||||||||| Sbjct: 584 tgaatctccacgccgtc 568
>dbj|AB122088.1| Oryza sativa (japonica cultivar-group) OPDAR1 gene for 12-oxo-phytodienoic acid reductase, complete cds Length = 2492 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | ||||||||| ||||| Sbjct: 1837 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccaccgtactcg 1778 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | ||||||||| | || ||| || | ||| ||| Sbjct: 1777 tcggtgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtgcgcgcca 1718 Query: 412 tggatctccacgccgtc 428 || |||||||||||||| Sbjct: 1717 tgaatctccacgccgtc 1701
>dbj|AK103067.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117P12, full insert sequence Length = 1520 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | ||||||||| ||||| Sbjct: 889 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccaccgtactcg 830 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | ||||||||| | || ||| || | ||| ||| Sbjct: 829 tcggtgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtgcgcgcca 770 Query: 412 tggatctccacgccgtc 428 || |||||||||||||| Sbjct: 769 tgaatctccacgccgtc 753
>dbj|AB040743.1| Oryza sativa RRJ4 mRNA for 12-oxophytodienoic acid reductase, complete cds Length = 1384 Score = 89.7 bits (45), Expect = 8e-15 Identities = 114/137 (83%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | ||||||||| ||||| Sbjct: 742 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccaccgtactcg 683 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || || |||||||| | ||||||||| | || ||| || | ||| ||| Sbjct: 682 tcggtgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtgcgcgcca 623 Query: 412 tggatctccacgccgtc 428 || |||||||||||||| Sbjct: 622 tgaatctccacgccgtc 606
>ref|XM_572706.1| Cryptococcus neoformans var. neoformans JEC21 NADPH dehydrogenase 2 (CNI02360) partial mRNA Length = 1246 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 379 aggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaaccggca 438 |||||||| ||||||||||| |||||||| || |||||||| ||||||||||| ||||| Sbjct: 572 aggaactgatcgatgaagtaaccattcgcaccgtggatctcaacgccgtcaaagccggcc 513 Query: 439 tcaatagcgttc 450 |||||||||||| Sbjct: 512 tcaatagcgttc 501
>dbj|AK104256.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E01, full insert sequence Length = 1281 Score = 87.7 bits (44), Expect = 3e-14 Identities = 131/160 (81%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 744 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 685 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||||||||||| || ||| || || || || Sbjct: 684 tcggtgcggtcgttggagctgtccttcatgaactgctcgaggaggtagccgttggcgccg 625 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||||||||||||||||| || ||||| || || ||||||| Sbjct: 624 tggatctccacgccgtcgaacccggcctcgatggcgttcc 585
>dbj|AK104193.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D11, full insert sequence Length = 1281 Score = 87.7 bits (44), Expect = 3e-14 Identities = 131/160 (81%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 744 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 685 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||||||||||| || ||| || || || || Sbjct: 684 tcggtgcggtcgttggagctgtccttcatgaactgctcgaggaggtagccgttggcgccg 625 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||||||||||||||||| || ||||| || || ||||||| Sbjct: 624 tggatctccacgccgtcgaacccggcctcgatggcgttcc 585
>dbj|AK104039.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-G06, full insert sequence Length = 1422 Score = 87.7 bits (44), Expect = 3e-14 Identities = 131/160 (81%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 739 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 680 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||||||||||| || ||| || || || || Sbjct: 679 tcggtgcggtcgttggagctgtccttcatgaactgctcgaggaggtagccgttggcgccg 620 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||||||||||||||||| || ||||| || || ||||||| Sbjct: 619 tggatctccacgccgtcgaacccggcctcgatggcgttcc 580
>dbj|AK061212.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-D07, full insert sequence Length = 1434 Score = 87.7 bits (44), Expect = 3e-14 Identities = 131/160 (81%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 744 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 685 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||||||||||| || ||| || || || || Sbjct: 684 tcggtgcggtcgttggagctgtccttcatgaactgctcgaggaggtagccgttggcgccg 625 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||||||||||||||||| || ||||| || || ||||||| Sbjct: 624 tggatctccacgccgtcgaacccggcctcgatggcgttcc 585
>dbj|AK105590.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-129-A06, full insert sequence Length = 1311 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 225 gcagtccatgtagtcggtgaagggagagaggcggatgcccacacggtggccaccaacctc 284 ||||||||| |||||| |||| || || || | ||| ||||||||||| | |||||||| Sbjct: 814 gcagtccatatagtcgatgaacggtgacagcctgatccccacacggtgcgctccaacctc 755 Query: 285 cttcacaacggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccacc 344 || | ||| |||| |||||||| | | |||||||||||||| || | ||||||||| Sbjct: 754 ggcgacgatggcgtcgatcacctcgacaacgaagcggcaccggttctcgaggctgccacc 695 Query: 345 atactcatcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccatt 404 ||||| ||| ||||||| || || |||||||| | ||||||||| | || ||| || | Sbjct: 694 gtactcgtcgctgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtg 635 Query: 405 cgccccatggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||| || ||||||||||||||||| || ||||| || || ||||||| Sbjct: 634 cgcgccgtggatctccacgccgtcgaacccggcctcgatggcgttcc 588
>dbj|AK072596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125E21, full insert sequence Length = 1295 Score = 85.7 bits (43), Expect = 1e-13 Identities = 181/227 (79%) Strand = Plus / Minus Query: 225 gcagtccatgtagtcggtgaagggagagaggcggatgcccacacggtggccaccaacctc 284 ||||||||| |||||| |||| || || || | ||| ||||||||||| | |||||||| Sbjct: 797 gcagtccatatagtcgatgaacggtgacagcctgatccccacacggtgcgctccaacctc 738 Query: 285 cttcacaacggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccacc 344 || | ||| |||| |||||||| | | |||||||||||||| || | ||||||||| Sbjct: 737 ggcgacgatggcgtcgatcacctcgacaacgaagcggcaccggttctcgaggctgccacc 678 Query: 345 atactcatcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccatt 404 ||||| ||| ||||||| || || |||||||| | ||||||||| | || ||| || | Sbjct: 677 gtactcgtcgctgcggtcgttggcgctgtccttcatgaactgctccaggaggtagccgtg 618 Query: 405 cgccccatggatctccacgccgtcaaaaccggcatcaatagcgttcc 451 ||| || ||||||||||||||||| || ||||| || || ||||||| Sbjct: 617 cgcgccgtggatctccacgccgtcgaacccggcctcgatggcgttcc 571
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 83.8 bits (42), Expect = 5e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 381 gaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaaccggcatc 440 |||||| ||||||||||| |||||||| || |||||||| ||||||||||| ||||| || Sbjct: 653727 gaactgatcgatgaagtaaccattcgcaccgtggatctcaacgccgtcaaagccggcctc 653786 Query: 441 aatagcgttc 450 |||||||||| Sbjct: 653787 aatagcgttc 653796
>dbj|AK108079.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E09, full insert sequence Length = 1517 Score = 79.8 bits (40), Expect = 8e-12 Identities = 151/188 (80%) Strand = Plus / Minus Query: 292 acggcatcgaccacctcgagagcaaagcggcaccggttttctatgctgccaccatactca 351 ||||| |||| |||||||| || |||||||||||||| || | |||||| || ||||| Sbjct: 822 acggcgtcgatcacctcgacggcgaagcggcaccggttctcgaggctgccgccgtactcg 763 Query: 352 tcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagtacccattcgcccca 411 ||||||||||| || | |||||||| | ||| ||||||| || ||| || ||||| || Sbjct: 762 tcggtgcggtcgttggagctgtccttcatgaattgctcgaggaggtagccgttcgcgccg 703 Query: 412 tggatctccacgccgtcaaaaccggcatcaatagcgttcctggccgccttcctgaaatca 471 |||||||| || ||||| || ||||| || | ||||||||||| || ||||||||| Sbjct: 702 tggatctcaacaccgtcgaacccggcctcgactgcgttcctggcagcgagcctgaaatcg 643 Query: 472 tcgacgat 479 |||||||| Sbjct: 642 tcgacgat 635
>gb|AY921641.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR4) mRNA, complete cds Length = 1833 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 214 tcggagtcatggcagtccatgtagtcggtgaagggagagaggcgga 259 |||||||| ||||||||||||||||| |||||||| |||||||||| Sbjct: 1388 tcggagtcgtggcagtccatgtagtcagtgaagggggagaggcgga 1343 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 370 ctgtccttgaggaactgctcgatgaagtacccattcgccccatggatctccacgccgtc 428 ||||||||||||||||||||||||| ||| || || || || |||| ||| |||||||| Sbjct: 1232 ctgtccttgaggaactgctcgatgaggtagccgttggcgccgtggacctcgacgccgtc 1174
>gb|AY921640.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR3) mRNA, complete cds Length = 1431 Score = 60.0 bits (30), Expect = 7e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 316 aagcggcaccggttttctatgctgccaccatactcatcggtgcggtcattcgcactgtcc 375 |||||||||||||| || | |||||| || ||||| |||| |||||| || || | |||| Sbjct: 699 aagcggcaccggttctcgacgctgccgccgtactcgtcggcgcggtcgttggcgccgtcc 640 Query: 376 ttgaggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaaccg 435 || | ||||||||| | || | |||| | ||| || ||||||||||||||||| || ||| Sbjct: 639 ttcatgaactgctccaggaggaacccgtgcgctccgtggatctccacgccgtcgaacccg 580 Query: 436 gc 437 || Sbjct: 579 gc 578
>dbj|AK100034.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149N02, full insert sequence Length = 2710 Score = 60.0 bits (30), Expect = 7e-06 Identities = 99/122 (81%) Strand = Plus / Minus Query: 316 aagcggcaccggttttctatgctgccaccatactcatcggtgcggtcattcgcactgtcc 375 |||||||||||||| ||||||| ||| || ||| | ||||| ||||| || | |||||| Sbjct: 2068 aagcggcaccggttctctatgccgccgccgtacgcgtcggtccggtcgttgacgctgtcc 2009 Query: 376 ttgaggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaaccg 435 || | |||||| ||||| | ||| ||||| || || |||||||| || ||||| |||||| Sbjct: 2008 ttcatgaactggtcgatcaggtaaccattggcgccgtggatctcaaccccgtcgaaaccg 1949 Query: 436 gc 437 || Sbjct: 1948 gc 1947 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 214 tcggagtcatggcagtccatgtagtcggtgaagggagagaggcg 257 |||||||| ||||||||||||||||||| ||| || |||||||| Sbjct: 2170 tcggagtcgtggcagtccatgtagtcggcgaacggggagaggcg 2127
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 214 tcggagtcatggcagtccatgtagtcggtgaagggagagaggcg 257 |||||||| ||||||||||||||||||| ||| || |||||||| Sbjct: 15167687 tcggagtcgtggcagtccatgtagtcggcgaacggggagaggcg 15167730 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 316 aagcggcaccggttttctatgctgccaccatactcatcggtgcggtcattcgcactgtcc 375 |||||||||||||| ||||||| ||| || ||| | ||||| ||||| || | |||||| Sbjct: 15167789 aagcggcaccggttctctatgccgccgccgtacgcgtcggtccggtcgttgacgctgtcc 15167848 Query: 376 ttgaggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaacc 434 || | |||||| ||||| | ||| ||||| || || |||||||| || ||||| ||||| Sbjct: 15167849 ttcatgaactggtcgatcaggtaaccattggcgccgtggatctcaaccccgtcgaaacc 15167907 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 catggatctccacgccgtcaaaacc 434 ||||||||||||||||||| ||||| Sbjct: 15175647 catggatctccacgccgtcgaaacc 15175671
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 214 tcggagtcatggcagtccatgtagtcggtgaagggagagaggcg 257 |||||||| ||||||||||||||||||| ||| || |||||||| Sbjct: 139653 tcggagtcgtggcagtccatgtagtcggcgaacggggagaggcg 139696 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 316 aagcggcaccggttttctatgctgccaccatactcatcggtgcggtcattcgcactgtcc 375 |||||||||||||| ||||||| ||| || ||| | ||||| ||||| || | |||||| Sbjct: 139755 aagcggcaccggttctctatgccgccgccgtacgcgtcggtccggtcgttgacgctgtcc 139814 Query: 376 ttgaggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaacc 434 || | |||||| ||||| | ||| ||||| || || |||||||| || ||||| ||||| Sbjct: 139815 ttcatgaactggtcgatcaggtaaccattggcgccgtggatctcaaccccgtcgaaacc 139873 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 catggatctccacgccgtcaaaacc 434 ||||||||||||||||||| ||||| Sbjct: 147613 catggatctccacgccgtcgaaacc 147637
>dbj|AP002914.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0493G01 Length = 167587 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 214 tcggagtcatggcagtccatgtagtcggtgaagggagagaggcg 257 |||||||| ||||||||||||||||||| ||| || |||||||| Sbjct: 21060 tcggagtcgtggcagtccatgtagtcggcgaacggggagaggcg 21103 Score = 54.0 bits (27), Expect = 4e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 316 aagcggcaccggttttctatgctgccaccatactcatcggtgcggtcattcgcactgtcc 375 |||||||||||||| ||||||| ||| || ||| | ||||| ||||| || | |||||| Sbjct: 21162 aagcggcaccggttctctatgccgccgccgtacgcgtcggtccggtcgttgacgctgtcc 21221 Query: 376 ttgaggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaacc 434 || | |||||| ||||| | ||| ||||| || || |||||||| || ||||| ||||| Sbjct: 21222 ttcatgaactggtcgatcaggtaaccattggcgccgtggatctcaaccccgtcgaaacc 21280 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 410 catggatctccacgccgtcaaaacc 434 ||||||||||||||||||| ||||| Sbjct: 29020 catggatctccacgccgtcgaaacc 29044
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 400 ccattcgccccatggatctccacgccgtcaaaacc 434 ||||||||||| |||||||| |||||||||||||| Sbjct: 653942 ccattcgccccgtggatctcgacgccgtcaaaacc 653976
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 379 aggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaaccggc 437 ||||| || ||||||| |||||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 2093714 aggaattggtcgatgaggtacccgttcgccccgtggatctccacaccgtcgaacccggc 2093656
>ref|XM_751040.1| Aspergillus fumigatus Af293 NADPHdehydrogenase 3 (Afu2g17960) partial mRNA Length = 1131 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 381 gaactgctcgatgaagtacccattcgccccatggatctccac 422 |||||| ||||||| ||||||||| || |||||||||||||| Sbjct: 549 gaactggtcgatgaggtacccattggcaccatggatctccac 508
>emb|CR378680.1| Photobacterium profundum SS9 chromosome 2; segment 6/7 Length = 349751 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 325 cggttttctatgctgccaccatactcatcggtgcggt 361 |||||||||| |||||||||||| ||||| ||||||| Sbjct: 58644 cggttttctaagctgccaccatattcatctgtgcggt 58680
>gb|U37350.1|PPU37350 Pseudomonas putida morphinone reductase (morB) gene, complete cds Length = 1567 Score = 50.1 bits (25), Expect = 0.007 Identities = 28/29 (96%) Strand = Plus / Minus Query: 97 tcgaggaaggggtagtcggtgtaaccgac 125 ||||||||||||||||||||||| ||||| Sbjct: 1393 tcgaggaaggggtagtcggtgtagccgac 1365
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 48.1 bits (24), Expect = 0.027 Identities = 51/60 (85%) Strand = Plus / Minus Query: 381 gaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaaccggcatc 440 |||||| ||||| | ||| ||||| || ||||||||||| |||||||| || |||||||| Sbjct: 3120168 gaactgatcgatcaggtaaccattggcgccatggatctcgacgccgtcgaagccggcatc 3120109
>dbj|AB025798.1| Azotobacter vinelandii gene for NAD(P)H-dependent 2-cyclohexen-1-one reductase homolog, iron superoxide dismutase, complete cds Length = 3550 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Minus Query: 370 ctgtccttgaggaactgctcgatgaagtacccattcgccccatggatctccacgccgtca 429 ||||||| ||||||||| |||| | ||| || || ||| ||||||||||||||||||| Sbjct: 987 ctgtcctggaggaactggtcgagcaggtaaccgttggccgcatggatctccacgccgtcg 928 Query: 430 aaaccggc 437 || ||||| Sbjct: 927 aagccggc 920
>ref|NM_202428.1| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680 (OPR1) transcript variant AT1G76680.2 mRNA, complete cds Length = 1460 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 97 tcgaggaaggggtagtcggtgtaaccgacga 127 |||||||| ||||| |||||||||||||||| Sbjct: 1251 tcgaggaaagggtaatcggtgtaaccgacga 1221
>ref|NM_106318.3| Arabidopsis thaliana OPR1; 12-oxophytodienoate reductase AT1G76680 (OPR1) transcript variant AT1G76680.1 mRNA, complete cds Length = 1451 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 97 tcgaggaaggggtagtcggtgtaaccgacga 127 |||||||| ||||| |||||||||||||||| Sbjct: 1242 tcgaggaaagggtaatcggtgtaaccgacga 1212
>gb|BT020365.1| Arabidopsis thaliana At1g76680 gene, complete cds Length = 1119 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 97 tcgaggaaggggtagtcggtgtaaccgacga 127 |||||||| ||||| |||||||||||||||| Sbjct: 1106 tcgaggaaagggtaatcggtgtaaccgacga 1076
>gb|AC164306.3| Mus musculus BAC clone RP23-190A21 from chromosome 17, complete sequence Length = 206180 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 273 gccaccaacctccttcacaacggcatc 299 |||||| |||||||||||||||||||| Sbjct: 51122 gccacccacctccttcacaacggcatc 51096
>emb|Y13942.1|ARGTR Agrobacterium radiobacter genomic DNA for glycerol trinitrate reductase Length = 2882 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Minus Query: 379 aggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaaccggc 437 |||||||||||||| | ||| ||||| || ||||||| || |||||||| |||||||| Sbjct: 1757 aggaactgctcgatcaggtaaccattggcggcatggatttcgacgccgtcgaaaccggc 1699
>emb|Y10617.1|AT12OXOPR A.thaliana mRNA for 12-oxo-phytodienoate reductase Length = 1311 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 97 tcgaggaaggggtagtcggtgtaaccgacga 127 |||||||| ||||| |||||||||||||||| Sbjct: 1171 tcgaggaaagggtaatcggtgtaaccgacga 1141
>gb|AY074874.1| Arabidopsis thaliana At1g76680/F28O16_5 mRNA, complete cds Length = 1252 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 97 tcgaggaaggggtagtcggtgtaaccgacga 127 |||||||| ||||| |||||||||||||||| Sbjct: 1176 tcgaggaaagggtaatcggtgtaaccgacga 1146
>gb|AC010718.5|AC010718 Arabidopsis thaliana chromosome 1 BAC F28O16 genomic sequence, complete sequence Length = 87684 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 97 tcgaggaaggggtagtcggtgtaaccgacga 127 |||||||| ||||| |||||||||||||||| Sbjct: 15030 tcgaggaaagggtaatcggtgtaaccgacga 15000
>gb|AY087801.1| Arabidopsis thaliana clone 38527 mRNA, complete sequence Length = 1280 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 97 tcgaggaaggggtagtcggtgtaaccgacga 127 |||||||| ||||| |||||||||||||||| Sbjct: 1176 tcgaggaaagggtaatcggtgtaaccgacga 1146
>gb|U92460.1|ATU92460 Arabidopsis thaliana 12-oxophytodienoate reductase OPR1 and 12-oxophytodienoate reductase OPR2 genes, complete cds Length = 7079 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 97 tcgaggaaggggtagtcggtgtaaccgacga 127 |||||||| ||||| |||||||||||||||| Sbjct: 4624 tcgaggaaagggtaatcggtgtaaccgacga 4594
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 46.1 bits (23), Expect = 0.11 Identities = 50/59 (84%) Strand = Plus / Plus Query: 379 aggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaaccggc 437 |||||||| || || | ||| ||||| ||| ||||||| ||||||||||| |||||||| Sbjct: 2433534 aggaactggtctatcaggtagccattggccgcatggatttccacgccgtcgaaaccggc 2433592
>gb|AY921644.1| Zea mays 12-oxo-phytodienoic acid reductase (OPR7) mRNA, complete cds Length = 1594 Score = 44.1 bits (22), Expect = 0.42 Identities = 40/46 (86%) Strand = Plus / Minus Query: 374 ccttgaggaactgctcgatgaagtacccattcgccccatggatctc 419 ||||||||||||| ||||||| ||| |||| || ||||||||||| Sbjct: 852 ccttgaggaactgatcgatgaggtagccatgggcgccatggatctc 807
>gb|AE008965.1| Agrobacterium tumefaciens str. C58 AT plasmid section 40 of 49 of the complete sequence Length = 11039 Score = 44.1 bits (22), Expect = 0.42 Identities = 82/102 (80%) Strand = Plus / Minus Query: 339 gccaccatactcatcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagta 398 ||||||||| ||||||||||| |||| |||| ||||||| |||||||| | || || Sbjct: 4986 gccaccataggcatcggtgcggacatttgcaccgtccttggcaaactgctccaggagata 4927 Query: 399 cccattcgccccatggatctccacgccgtcaaaaccggcatc 440 ||||||||||| || || || || || || ||||||||||| Sbjct: 4926 gccattcgccccgtgaatttcgaccccatcgaaaccggcatc 4885
>gb|AE007913.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 41 of 50 of the complete sequence Length = 6885 Score = 44.1 bits (22), Expect = 0.42 Identities = 82/102 (80%) Strand = Plus / Minus Query: 339 gccaccatactcatcggtgcggtcattcgcactgtccttgaggaactgctcgatgaagta 398 ||||||||| ||||||||||| |||| |||| ||||||| |||||||| | || || Sbjct: 2184 gccaccataggcatcggtgcggacatttgcaccgtccttggcaaactgctccaggagata 2125 Query: 399 cccattcgccccatggatctccacgccgtcaaaaccggcatc 440 ||||||||||| || || || || || || ||||||||||| Sbjct: 2124 gccattcgccccgtgaatttcgaccccatcgaaaccggcatc 2083
>ref|XM_677522.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9345.2), mRNA Length = 1233 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Minus Query: 397 tacccattcgccccatggatctccac 422 ||||||||||| |||||||||||||| Sbjct: 563 tacccattcgcaccatggatctccac 538
>gb|AC166333.9| Mus musculus chromosome 1, clone RP23-395A13, complete sequence Length = 188044 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 ctgaacaaaaaacctccatca 88 ||||||||||||||||||||| Sbjct: 113882 ctgaacaaaaaacctccatca 113902
>ref|XM_388253.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08077.1) partial mRNA Length = 1242 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 gctgccaccatactcatcggt 356 ||||||||||||||||||||| Sbjct: 708 gctgccaccatactcatcggt 688
>dbj|AK121554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033033G12, full insert sequence Length = 1613 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 410 catggatctccacgccgtcaaaacc 434 ||||||||||||||||||| ||||| Sbjct: 805 catggatctccacgccgtcgaaacc 781
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 379 aggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaa 431 |||||||| ||||| || || ||||| || || || ||||||||||||||||| Sbjct: 1185944 aggaactggtcgatcaaataaccattggcgccgtgaatctccacgccgtcaaa 1185996
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 424 ccgtcaaaaccggcatcaat 443 |||||||||||||||||||| Sbjct: 1979913 ccgtcaaaaccggcatcaat 1979894
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 tggatctccacgccgtcaaa 431 |||||||||||||||||||| Sbjct: 33524 tggatctccacgccgtcaaa 33505
>ref|XM_657740.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5228.2), mRNA Length = 1140 Score = 40.1 bits (20), Expect = 6.6 Identities = 53/64 (82%) Strand = Plus / Minus Query: 396 gtacccattcgccccatggatctccacgccgtcaaaaccggcatcaatagcgttcctggc 455 |||||| ||||| ||||||||||| ||||| || || || || || |||||||| |||| Sbjct: 537 gtacccgttcgcgccatggatctcaacgccatcgaacccagcctcgatagcgtttttggc 478 Query: 456 cgcc 459 |||| Sbjct: 477 cgcc 474
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 aacggcatcgaccacctcga 310 |||||||||||||||||||| Sbjct: 245149 aacggcatcgaccacctcga 245168
>ref|XM_661982.1| Cryptosporidium hominis TU502 homeobox-containing protein (Chro.70242) partial mRNA Length = 3051 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ttgcatcactgaacaaaaaa 79 |||||||||||||||||||| Sbjct: 2553 ttgcatcactgaacaaaaaa 2572
>emb|AL589665.4| Human DNA sequence from clone RP11-123D12 on chromosome 1 Contains a neural precursor cell expressed developmentally down-regulated 5 (NEDD5) pseudogene, complete sequence Length = 132623 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 54 aattaattgcatcactgaacaaaa 77 ||||||||||||| |||||||||| Sbjct: 67340 aattaattgcatccctgaacaaaa 67317
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 ctgccaccatactcatcggt 356 |||||||||||||||||||| Sbjct: 1971016 ctgccaccatactcatcggt 1971035
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 379 aggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaacc 434 |||||||| |||| | ||| ||||| ||| |||| |||||||||||||| ||||| Sbjct: 1974982 aggaactggtcgagcaggtagccattggccgcatgaatctccacgccgtcgaaacc 1975037
>emb|AL031595.4|HS671O14 Human DNA sequence from clone RP4-671O14 on chromosome 22q13.2-13.33, complete sequence Length = 102739 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 253 aggcggatgcccacacggtggcca 276 |||| ||||||||||||||||||| Sbjct: 60534 aggcagatgcccacacggtggcca 60557
>emb|Y16136.1|CTY16136 Clostridium thermoaceticum enr gene Length = 2142 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 410 catggatctccacgccgtcaaaaccggc 437 ||||||||||||| |||||||| ||||| Sbjct: 572 catggatctccaccccgtcaaagccggc 545
>gb|AC021956.8| Homo sapiens chromosome 11, clone RP11-447I3, complete sequence Length = 197864 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 cgaccatgtgaagatagagg 162 |||||||||||||||||||| Sbjct: 187209 cgaccatgtgaagatagagg 187228
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ccatggatctccacgccgtc 428 |||||||||||||||||||| Sbjct: 1085461 ccatggatctccacgccgtc 1085442
>gb|AC092697.6| Oryza sativa chromosome 10 BAC OSJNBb0060I05 genomic sequence, complete sequence Length = 105841 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tgaagggagagaggcggatg 261 |||||||||||||||||||| Sbjct: 16080 tgaagggagagaggcggatg 16099
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tgaagggagagaggcggatg 261 |||||||||||||||||||| Sbjct: 178313 tgaagggagagaggcggatg 178332
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 412 tggatctccacgccgtcaaaaccggcatcaat 443 ||||||||||| ||||||||||| || ||||| Sbjct: 1744736 tggatctccaccccgtcaaaacccgcttcaat 1744705
>gb|AC021006.7| Homo sapiens chromosome 11, clone RP11-124G5, complete sequence Length = 183772 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 cgaccatgtgaagatagagg 162 |||||||||||||||||||| Sbjct: 95470 cgaccatgtgaagatagagg 95489
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 410 catggatctccacgccgtcaaaaccggc 437 ||||||||||||| |||||||| ||||| Sbjct: 2149273 catggatctccaccccgtcaaagccggc 2149300
>ref|XM_628384.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd7_2100), partial mRNA Length = 6801 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ttgcatcactgaacaaaaaa 79 |||||||||||||||||||| Sbjct: 2553 ttgcatcactgaacaaaaaa 2572
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 tggatctccacgccgtcaaa 431 |||||||||||||||||||| Sbjct: 21276052 tggatctccacgccgtcaaa 21276033
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tgaagggagagaggcggatg 261 |||||||||||||||||||| Sbjct: 20300578 tgaagggagagaggcggatg 20300597
>gb|AE009679.1| Brucella melitensis 16M chromosome II, section 41 of 107 of the complete sequence Length = 12980 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ccttcctgaaatcatcgacg 477 |||||||||||||||||||| Sbjct: 11803 ccttcctgaaatcatcgacg 11784
>gb|AE004851.1| Pseudomonas aeruginosa PAO1, section 412 of 529 of the complete genome Length = 13101 Score = 40.1 bits (20), Expect = 6.6 Identities = 56/68 (82%) Strand = Plus / Minus Query: 370 ctgtccttgaggaactgctcgatgaagtacccattcgccccatggatctccacgccgtca 429 ||||||| ||||||||| |||| | ||| || || || || ||||||||||||||||| Sbjct: 9624 ctgtcctggaggaactggtcgagcaggtagccgttggcgccgtggatctccacgccgtcg 9565 Query: 430 aaaccggc 437 || ||||| Sbjct: 9564 aagccggc 9557
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ccatcctcggctcgaccatg 150 |||||||||||||||||||| Sbjct: 3220858 ccatcctcggctcgaccatg 3220839
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.6 Identities = 47/56 (83%) Strand = Plus / Plus Query: 379 aggaactgctcgatgaagtacccattcgccccatggatctccacgccgtcaaaacc 434 |||||||| ||||||| || || || || ||||||||||| |||||||| ||||| Sbjct: 1789613 aggaactggtcgatgagatatccgttggcgccatggatctcgacgccgtcgaaacc 1789668
>gb|AE017224.1| Brucella abortus biovar 1 str. 9-941 chromosome II, complete sequence Length = 1162204 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ccttcctgaaatcatcgacg 477 |||||||||||||||||||| Sbjct: 367824 ccttcctgaaatcatcgacg 367805
>ref|XM_320996.2| Anopheles gambiae str. PEST ENSANGP00000019844 (ENSANGG00000017355), partial mRNA Length = 1809 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gatggccatcctcggctcga 145 |||||||||||||||||||| Sbjct: 147 gatggccatcctcggctcga 166
>gb|AC115945.9| Mus musculus chromosome 3, clone RP24-555P13, complete sequence Length = 172240 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 tcggagtcatggcagtccat 233 |||||||||||||||||||| Sbjct: 147273 tcggagtcatggcagtccat 147254
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 414 gatctccacgccgtcaaaaccggc 437 |||||| ||||||||||||||||| Sbjct: 2901008 gatctcgacgccgtcaaaaccggc 2900985
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 412 tggatctccacgccgtcaaaaccggcatcaat 443 ||||||||||| ||||||||||| || ||||| Sbjct: 1157093 tggatctccaccccgtcaaaacccgcttcaat 1157062
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 242 tgaagggagagaggcggatg 261 |||||||||||||||||||| Sbjct: 20311854 tgaagggagagaggcggatg 20311873
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 tggatctccacgccgtcaaa 431 |||||||||||||||||||| Sbjct: 21586251 tggatctccacgccgtcaaa 21586232
>emb|AM040265.1| Brucella melitensis biovar Abortus chromosome II, complete sequence, strain 2308 Length = 1156948 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 458 ccttcctgaaatcatcgacg 477 |||||||||||||||||||| Sbjct: 367893 ccttcctgaaatcatcgacg 367874
>gb|U57100.2|BAU57100 Brucella abortus erythritol catabolism gene cluster, eryA, eryB, eryC and eryD genes, complete cds Length = 7717 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 ccttcctgaaatcatcgacg 477 |||||||||||||||||||| Sbjct: 1012 ccttcctgaaatcatcgacg 1031 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,612,531 Number of Sequences: 3902068 Number of extensions: 3612531 Number of successful extensions: 64701 Number of sequences better than 10.0: 82 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 63972 Number of HSP's gapped (non-prelim): 725 length of query: 490 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 468 effective length of database: 17,147,199,772 effective search space: 8024889493296 effective search space used: 8024889493296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
