>emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chromosome 11, complete
             sequence
          Length = 155196

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 158   agttttatattagggtttaatg 179
             ||||||||||||||||||||||
Sbjct: 54624 agttttatattagggtttaatg 54603

>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence
          Length = 192540

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 134    tccgtatgttgcccacatcgg 154
              |||||||||||||||||||||
Sbjct: 159801 tccgtatgttgcccacatcgg 159781

>gb|AC122409.4| Mus musculus BAC clone RP24-140P18 from chromosome 8, complete sequence
          Length = 178068

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 83     cttgcatccccatgttgcaca 103
              |||||||||||||||||||||
Sbjct: 125955 cttgcatccccatgttgcaca 125935

>gb|AC133123.3| Homo sapiens 3 BAC RP11-441E2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 223   acaaaaatctgggaaataggtaaaa 247
             |||||||| ||||||||||||||||
Sbjct: 59281 acaaaaatttgggaaataggtaaaa 59305

>gb|AC140112.3| Homo sapiens BAC clone RP11-1278I4 from UL, complete sequence
          Length = 216658

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 223   acaaaaatctgggaaataggtaaaa 247
             |||||||| ||||||||||||||||
Sbjct: 33363 acaaaaatttgggaaataggtaaaa 33339

>emb|AL359181.28| Human DNA sequence from clone RP11-392N11 on chromosome 9 Contains the 3'
              end of the PHF2 gene for PHD finger protein 2 (GRC5,
              KIAA0662), complete sequence
          Length = 165415

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 223    acaaaaatctgggaaataggtaaaa 247
              |||||||| ||||||||||||||||
Sbjct: 137509 acaaaaatttgggaaataggtaaaa 137485

>gb|AC138773.5| Homo sapiens BAC clone RP11-1320L20 from UL, complete sequence
          Length = 191144

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 223   acaaaaatctgggaaataggtaaaa 247
             |||||||| ||||||||||||||||
Sbjct: 28926 acaaaaatttgggaaataggtaaaa 28950

>gb|AC008813.6| Homo sapiens chromosome 19 clone CTD-2102P23, complete sequence
          Length = 162914

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 223    acaaaaatctgggaaataggtaaaa 247
              |||||||| ||||||||||||||||
Sbjct: 110749 acaaaaatttgggaaataggtaaaa 110773

>gb|AC148939.8| Pan troglodytes BAC clone CH251-51M11 from chromosome 7, complete
             sequence
          Length = 183313

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 223   acaaaaatctgggaaataggtaaaa 247
             |||||||| ||||||||||||||||
Sbjct: 70525 acaaaaatttgggaaataggtaaaa 70549

>dbj|AK131448.1| Homo sapiens cDNA FLJ16592 fis, clone TESTI4001984
          Length = 3944

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 223  acaaaaatctgggaaataggtaaaa 247
            |||||||| ||||||||||||||||
Sbjct: 2648 acaaaaatttgggaaataggtaaaa 2672

>gb|AC114954.2| Homo sapiens chromosome 5 clone RP11-103A10, complete sequence
          Length = 157980

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 223    acaaaaatctgggaaataggtaaaa 247
              |||||||| ||||||||||||||||
Sbjct: 105144 acaaaaatttgggaaataggtaaaa 105120

>ref|NM_167518.1| Drosophila melanogaster Traf3 CG4394-RB, transcript variant B
           (Traf3), mRNA
          Length = 1809

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccgtatgttgcccacatcgg 154
           |||||||||||||||||||||
Sbjct: 340 tccgtatgttgcccacatcgg 320

>ref|NM_167517.1| Drosophila melanogaster Traf3 CG4394-RA, transcript variant A
           (Traf3), mRNA
          Length = 2249

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccgtatgttgcccacatcgg 154
           |||||||||||||||||||||
Sbjct: 780 tccgtatgttgcccacatcgg 760

>ref|NM_132898.2| Drosophila melanogaster Traf3 CG4394-RC, transcript variant C
           (Traf3), mRNA
          Length = 2337

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccgtatgttgcccacatcgg 154
           |||||||||||||||||||||
Sbjct: 868 tccgtatgttgcccacatcgg 848

>gb|AY052057.1| Drosophila melanogaster LP08566 full length cDNA
          Length = 2352

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 134 tccgtatgttgcccacatcgg 154
           |||||||||||||||||||||
Sbjct: 868 tccgtatgttgcccacatcgg 848

>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone
             BACR47D09, complete sequence
          Length = 166935

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 134   tccgtatgttgcccacatcgg 154
             |||||||||||||||||||||
Sbjct: 63847 tccgtatgttgcccacatcgg 63827

>gb|AC150749.3| Pan troglodytes BAC clone CH251-553P23 from chromosome 7, complete
              sequence
          Length = 237211

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 223    acaaaaatctgggaaataggtaaaa 247
              |||||||| ||||||||||||||||
Sbjct: 105323 acaaaaatttgggaaataggtaaaa 105299

>emb|BX546492.4| Human DNA sequence from clone RP11-441E2 on chromosome 22, complete
             sequence
          Length = 165333

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 223   acaaaaatctgggaaataggtaaaa 247
             |||||||| ||||||||||||||||
Sbjct: 59282 acaaaaatttgggaaataggtaaaa 59306

>dbj|AB016870.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K15I22
          Length = 59648

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 216  tacacacacaaaaatctggga 236
            |||||||||||||||||||||
Sbjct: 6042 tacacacacaaaaatctggga 6022

>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete
             sequence
          Length = 304712

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 134   tccgtatgttgcccacatcgg 154
             |||||||||||||||||||||
Sbjct: 83129 tccgtatgttgcccacatcgg 83109

>gb|AC004051.1|AC004051 Homo sapiens chromosome 4 clone B208G5 map 4q25, complete sequence
          Length = 147665

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 6     cacaatggtctcttaatttct 26
             |||||||||||||||||||||
Sbjct: 45527 cacaatggtctcttaatttct 45507

>gb|AC160127.2| Mus musculus BAC clone RP23-295O2 from chromosome 9, complete sequence
          Length = 205289

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   acattttacatgaggagtac 218
             ||||||||||||||||||||
Sbjct: 86957 acattttacatgaggagtac 86976

>gb|AC105968.14| Mus musculus chromosome 18, clone RP23-265P4, complete sequence
          Length = 210819

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 224   caaaaatctgggaaataggtaaaa 247
             ||||||||||||||| ||||||||
Sbjct: 28379 caaaaatctgggaaagaggtaaaa 28402

>gb|AY569234.1| Adelotettix gigas 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 509

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 ttttatattagggtttaatg 179
           ||||||||||||||||||||
Sbjct: 257 ttttatattagggtttaatg 276

>gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, complete sequence
          Length = 217989

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 224   caaaaatctgggaaataggtaaaa 247
             ||||||||||||||| ||||||||
Sbjct: 10578 caaaaatctgggaaagaggtaaaa 10555

>emb|AL355339.7| Human DNA sequence from clone RP11-461K13 on chromosome 10 Contains a
             novel gene, complete sequence
          Length = 163565

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ctcttaatttcttgaaaagg 34
             ||||||||||||||||||||
Sbjct: 30774 ctcttaatttcttgaaaagg 30793

>gb|AF203743.1| Eonycteris spelaea 16S ribosomal RNA gene, complete sequence;
           mitochondrial gene for mitochondrial product
          Length = 1572

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 391 catgtagtcgttgagcttga 410
           ||||||||||||||||||||
Sbjct: 554 catgtagtcgttgagcttga 535

>emb|AL929495.21| Zebrafish DNA sequence from clone CH211-136M16 in linkage group 12,
             complete sequence
          Length = 157568

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 217   acacacacaaaaatctgggaaataggtaaaaa 248
             ||||||||||||| |||| ||||| |||||||
Sbjct: 23475 acacacacaaaaaactggaaaatacgtaaaaa 23444

>gb|AC098847.4| Homo sapiens chromosome 18, clone RP11-824M15, complete sequence
          Length = 206693

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   gaggagtacacacacaaaaa 229
             ||||||||||||||||||||
Sbjct: 77623 gaggagtacacacacaaaaa 77642

>gb|AC099790.3| Homo sapiens chromosome 1 clone RP11-397G23, complete sequence
          Length = 213942

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 205    tacatgaggagtacacacacaaaa 228
              ||||||| ||||||||||||||||
Sbjct: 175815 tacatgaagagtacacacacaaaa 175792

>emb|Y11658.1|ECVHL88 Equus caballus DNA for CA microsatellite, locus ECVHL88
          Length = 595

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 205 tacatgaggagtacacacac 224
           ||||||||||||||||||||
Sbjct: 317 tacatgaggagtacacacac 298

>emb|AL713979.6| Mouse DNA sequence from clone RP23-434O7 on chromosome X, complete
              sequence
          Length = 148507

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    agtgtcatggtatttttcca 392
              ||||||||||||||||||||
Sbjct: 139391 agtgtcatggtatttttcca 139410


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,291,631
Number of Sequences: 3902068
Number of extensions: 4291631
Number of successful extensions: 82005
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81951
Number of HSP's gapped (non-prelim): 54
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)