Clone Name | rbart25a05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HSP74_TRYBB (P11145) Heat shock 70 kDa protein 4 (HSP70) | 31 | 1.3 | 2 | HSP70_LEIAM (Q07437) Heat shock 70 kDa protein | 29 | 3.7 | 3 | HSP70_LEIMA (P14834) Heat shock 70 kDa protein (Fragment) | 29 | 3.7 | 4 | HSP70_LEIDO (P17804) Heat shock 70 kDa protein | 29 | 3.7 | 5 | DAPA_RICFE (Q4ULR2) Dihydrodipicolinate synthase (EC 4.2.1.52) (... | 28 | 6.4 | 6 | HSP70_TRYCR (P05456) Heat shock 70 kDa protein | 28 | 8.3 | 7 | YJX4_SCHPO (Q9UU99) Protein C23B6.04c in chromosome III | 28 | 8.3 |
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>HSP74_TRYBB (P11145) Heat shock 70 kDa protein 4 (HSP70)| Length = 661 Score = 30.8 bits (68), Expect = 1.3 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%) Frame = -3 Query: 381 GGKSKDASWKEHHGGHRLDGGAVD-GEKKKQGMMTALINSNVQVINNSLMLHSSCSGGDP 205 GGKSK G LD + G + G+MTALI N + + S+ S P Sbjct: 385 GGKSKQTE-----GLLLLDVAPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYSDNQP 439 Query: 204 GVHLKL 187 GVH+++ Sbjct: 440 GVHIQV 445
>HSP70_LEIAM (Q07437) Heat shock 70 kDa protein| Length = 652 Score = 29.3 bits (64), Expect = 3.7 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 Query: 291 GMMTALINSNVQVINNSLMLHSSCSGGDPGVHLKL 187 G+MTALI N + + S+ + PGVH+++ Sbjct: 411 GVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQV 445
>HSP70_LEIMA (P14834) Heat shock 70 kDa protein (Fragment)| Length = 516 Score = 29.3 bits (64), Expect = 3.7 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 Query: 291 GMMTALINSNVQVINNSLMLHSSCSGGDPGVHLKL 187 G+MTALI N + + S+ + PGVH+++ Sbjct: 411 GVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQV 445
>HSP70_LEIDO (P17804) Heat shock 70 kDa protein| Length = 653 Score = 29.3 bits (64), Expect = 3.7 Identities = 12/35 (34%), Positives = 20/35 (57%) Frame = -3 Query: 291 GMMTALINSNVQVINNSLMLHSSCSGGDPGVHLKL 187 G+MTALI N + + S+ + PGVH+++ Sbjct: 410 GVMTALIKRNTTIPTKKSQIFSTYADNQPGVHIQV 444
>DAPA_RICFE (Q4ULR2) Dihydrodipicolinate synthase (EC 4.2.1.52) (DHDPS)| Length = 294 Score = 28.5 bits (62), Expect = 6.4 Identities = 11/35 (31%), Positives = 23/35 (65%) Frame = -3 Query: 276 LINSNVQVINNSLMLHSSCSGGDPGVHLKLSAKST 172 L+ ++V+++NN + + S CS + +L+A+ST Sbjct: 61 LLQTSVEIVNNRIPIISGCSSNNTAYARELAAEST 95
>HSP70_TRYCR (P05456) Heat shock 70 kDa protein| Length = 680 Score = 28.1 bits (61), Expect = 8.3 Identities = 11/35 (31%), Positives = 20/35 (57%) Frame = -3 Query: 291 GMMTALINSNVQVINNSLMLHSSCSGGDPGVHLKL 187 G+MT+LI N + + S+ + PGVH+++ Sbjct: 411 GVMTSLIKRNTTIPTKKSQIFSTYADNQPGVHIQV 445
>YJX4_SCHPO (Q9UU99) Protein C23B6.04c in chromosome III| Length = 1008 Score = 28.1 bits (61), Expect = 8.3 Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 1/75 (1%) Frame = -3 Query: 390 KVGGGKSKDASWKEHHGG-HRLDGGAVDGEKKKQGMMTALINSNVQVINNSLMLHSSCSG 214 K+G GKSK S K + H + A G NV + S + S Sbjct: 20 KLGFGKSKGKSHKSNTSSIHERENTAAKGPASN----VRPARPNVSTSSTSNEVRKSVPV 75 Query: 213 GDPGVHLKLSAKSTP 169 G+P VH K + S+P Sbjct: 76 GNPTVHTKTGSSSSP 90 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,091,056 Number of Sequences: 219361 Number of extensions: 626484 Number of successful extensions: 2154 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2095 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2154 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)