ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25a05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549848.1| Oryza sativa (japonica cultivar-group), mRNA 105 1e-19
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
3dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
4dbj|AK061314.1| Oryza sativa (japonica cultivar-group) cDNA clon... 90 7e-15
5gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.4
6gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 42 1.4
7emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete ch... 42 1.4
8emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster fo... 42 1.4
9gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell ... 42 1.4
10ref|NM_132549.2| Drosophila melanogaster CG15735-RA (CG15735), mRNA 42 1.4
11gb|AY069351.1| Drosophila melanogaster LD05893 full length cDNA 42 1.4
12gb|AY104184.1| Zea mays PCO138787 mRNA sequence 42 1.4
13gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 ... 42 1.4
14gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 40 5.5
15gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 5.5
16gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 5.5
17ref|XM_483617.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
18ref|XM_466920.2| Oryza sativa (japonica cultivar-group), mRNA 40 5.5
19ref|XM_507511.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
20ref|XM_507510.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
21ref|XM_506875.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.5
22gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome... 40 5.5
23gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.5
24ref|XM_661426.1| Cryptosporidium hominis TU502 hypothetical prot... 40 5.5
25gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Ca... 40 5.5
26gb|AC154413.3| Mus musculus BAC clone RP24-230J5 from chromosome... 40 5.5
27dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.5
28gb|AF110772.1|AF110772 Streptomyces aureofaciens CCM3239 putativ... 40 5.5
29tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome 40 5.5
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
32dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
33dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN... 40 5.5
34dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
35dbj|AP004069.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
36dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
37dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
38dbj|AK121240.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
39dbj|AK106111.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
40dbj|AK104431.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
41dbj|AK104329.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
42dbj|AK071869.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
43dbj|AK069959.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
44gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 40 5.5
45gb|AC115296.6| Mus musculus BAC clone RP23-195I8 from chromosome... 40 5.5
46emb|X97257.1|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,... 40 5.5
47emb|CT009700.8| Mouse DNA sequence from clone RP23-114M15 on chr... 40 5.5 
>ref|XM_549848.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1023

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Minus

                                                                       
Query: 188 agcttgaggtgcacgccggggtcgccgccgctgcatgagctgtgcagcatcagcgagttg 247
           |||||||||||||| ||| |||||||||||||||| |||||||| || | ||||||||||
Sbjct: 727 agcttgaggtgcaccccgaggtcgccgccgctgcaggagctgtggagaagcagcgagttg 668

                                            
Query: 248 ttgatcacctgcacgttgctgttgatcagcgcc 280
           |||||   |||||||||||||||||||| ||||
Sbjct: 667 ttgatggactgcacgttgctgttgatcatcgcc 635
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                          
Query: 188    agcttgaggtgcacgccggggtcgccgccgctgcatgagctgtgcagcatcagcgagttg 247
              |||||||||||||| ||| |||||||||||||||| |||||||| || | ||||||||||
Sbjct: 331963 agcttgaggtgcaccccgaggtcgccgccgctgcaggagctgtggagaagcagcgagttg 332022

                                               
Query: 248    ttgatcacctgcacgttgctgttgatcagcgcc 280
              |||||   |||||||||||||||||||| ||||
Sbjct: 332023 ttgatggactgcacgttgctgttgatcatcgcc 332055
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>dbj|AP002863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0005A05
          Length = 190834

 Score =  105 bits (53), Expect = 1e-19
 Identities = 83/93 (89%)
 Strand = Plus / Plus

                                                                         
Query: 188   agcttgaggtgcacgccggggtcgccgccgctgcatgagctgtgcagcatcagcgagttg 247
             |||||||||||||| ||| |||||||||||||||| |||||||| || | ||||||||||
Sbjct: 83801 agcttgaggtgcaccccgaggtcgccgccgctgcaggagctgtggagaagcagcgagttg 83860

                                              
Query: 248   ttgatcacctgcacgttgctgttgatcagcgcc 280
             |||||   |||||||||||||||||||| ||||
Sbjct: 83861 ttgatggactgcacgttgctgttgatcatcgcc 83893
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>dbj|AK061314.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C12, full
           insert sequence
          Length = 1022

 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 82/93 (88%), Gaps = 1/93 (1%)
 Strand = Plus / Minus

                                                                       
Query: 188 agcttgaggtgcacgccggggtcgccgccgctgcatgagctgtgcagcatcagcgagttg 247
           |||||||||||||| ||| |||||||||||||||| |||||||| || | ||||||||||
Sbjct: 726 agcttgaggtgcaccccgaggtcgccgccgctgcaggagctgtggagaagcagcgagttg 667

                                            
Query: 248 ttgatcacctgcacgttgctgttgatcagcgcc 280
           |||||   ||||||||||| |||||||| ||||
Sbjct: 666 ttgatggactgcacgttgc-gttgatcatcgcc 635
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 141    gcttgtcggcgtgcttctgcttgtc 165
              |||||||||| ||||||||||||||
Sbjct: 807657 gcttgtcggcctgcttctgcttgtc 807681
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 140     tgcttgtcggcgtgcttctgc 160
               |||||||||||||||||||||
Sbjct: 2475946 tgcttgtcggcgtgcttctgc 2475926
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>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12
          Length = 294800

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 315   cggcgccgccgtccagccggt 335
             |||||||||||||||||||||
Sbjct: 72322 cggcgccgccgtccagccggt 72342
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>emb|AJ580915.1|SPA580915 Streptomyces parvulus Tu4055 cluster for borrelidin biosynthesis
          Length = 74787

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 323   ccgtccagccggtggccgccg 343
             |||||||||||||||||||||
Sbjct: 71481 ccgtccagccggtggccgccg 71461
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>gb|AC023688.4| Drosophila melanogaster X BAC RP98-42F7 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 186714

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 248   ttgatcacctgcacgttgctg 268
             |||||||||||||||||||||
Sbjct: 83543 ttgatcacctgcacgttgctg 83563
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>ref|NM_132549.2| Drosophila melanogaster CG15735-RA (CG15735), mRNA
          Length = 1259

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 248 ttgatcacctgcacgttgctg 268
           |||||||||||||||||||||
Sbjct: 764 ttgatcacctgcacgttgctg 744
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>gb|AY069351.1| Drosophila melanogaster LD05893 full length cDNA
          Length = 1221

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 248 ttgatcacctgcacgttgctg 268
           |||||||||||||||||||||
Sbjct: 719 ttgatcacctgcacgttgctg 699
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>gb|AY104184.1| Zea mays PCO138787 mRNA sequence
          Length = 771

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 208 gtcgccgccgctgcatgagct 228
           |||||||||||||||||||||
Sbjct: 475 gtcgccgccgctgcatgagct 495
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>gb|AE003488.3| Drosophila melanogaster chromosome X, section 40 of 74 of the
            complete sequence
          Length = 315134

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 248  ttgatcacctgcacgttgctg 268
            |||||||||||||||||||||
Sbjct: 2567 ttgatcacctgcacgttgctg 2547
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>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   cacgccggggtcgccgccgc 218
             ||||||||||||||||||||
Sbjct: 21489 cacgccggggtcgccgccgc 21508
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 381     cgcccaccttcatggacgcgccct 404
               ||||||||||||||| ||||||||
Sbjct: 3084544 cgcccaccttcatgggcgcgccct 3084521
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 96      gccggggagtcggcgacggc 115
               ||||||||||||||||||||
Sbjct: 1364860 gccggggagtcggcgacggc 1364841
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>ref|XM_483617.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2527

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 361  ggcgtccttgctcttgccgccgcc 384
            ||||||||| ||||||||||||||
Sbjct: 2138 ggcgtccttcctcttgccgccgcc 2115
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>ref|XM_466920.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1807

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcgccgtccacggcgccgcc 324
            ||||||||||||||||||||
Sbjct: 1104 tcgccgtccacggcgccgcc 1123
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>ref|XM_507511.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1
            mRNA
          Length = 1701

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcgccgtccacggcgccgcc 324
            ||||||||||||||||||||
Sbjct: 981  tcgccgtccacggcgccgcc 1000
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>ref|XM_507510.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1
            mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcgccgtccacggcgccgcc 324
            ||||||||||||||||||||
Sbjct: 984  tcgccgtccacggcgccgcc 1003
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>ref|XM_506875.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1
            mRNA
          Length = 1720

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcgccgtccacggcgccgcc 324
            ||||||||||||||||||||
Sbjct: 986  tcgccgtccacggcgccgcc 1005
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>gb|AC157570.5| Mus musculus BAC clone RP23-105H5 from chromosome 12, complete sequence
          Length = 227238

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   catcccctgcttcttctttt 305
             ||||||||||||||||||||
Sbjct: 86156 catcccctgcttcttctttt 86175
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>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0077L08, complete sequence
          Length = 115640

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 305   tcgccgtccacggcgccgccgtcc 328
             |||||||||||| |||||||||||
Sbjct: 30923 tcgccgtccacgccgccgccgtcc 30946
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>ref|XM_661426.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.30489)
            partial mRNA
          Length = 1620

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    tggtagagttgctcttattt 28
            ||||||||||||||||||||
Sbjct: 1114 tggtagagttgctcttattt 1095
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>gb|AC073583.19| Homo sapiens Xp BAC RP11-483M24 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 179187

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 258   gcacgttgctgttgatcagc 277
             ||||||||||||||||||||
Sbjct: 48408 gcacgttgctgttgatcagc 48389
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>gb|AC154413.3| Mus musculus BAC clone RP24-230J5 from chromosome 13, complete sequence
          Length = 174730

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tgcttctgcttgtccttggg 171
              ||||||||||||||||||||
Sbjct: 110591 tgcttctgcttgtccttggg 110572
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 369     tgctcttgccgccgcccacc 388
               ||||||||||||||||||||
Sbjct: 1699026 tgctcttgccgccgcccacc 1699045
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>gb|AF110772.1|AF110772 Streptomyces aureofaciens CCM3239 putative aldehyde dehydrogenase
            (aldA) gene, complete cds; benzylalcohol dehydrogenase
            homolog (adhA) gene, partial cds; and unknown gene
          Length = 3352

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 323  ccgtccagccggtggccgcc 342
            ||||||||||||||||||||
Sbjct: 2241 ccgtccagccggtggccgcc 2222
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>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   ccgtccacggcgccgccgtc 327
             ||||||||||||||||||||
Sbjct: 84627 ccgtccacggcgccgccgtc 84608
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 361      ggcgtccttgctcttgccgccgcc 384
                ||||||||| ||||||||||||||
Sbjct: 27300059 ggcgtccttcctcttgccgccgcc 27300082
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 305     tcgccgtccacggcgccgccgtcc 328
               |||||||||||| |||||||||||
Sbjct: 1852149 tcgccgtccacgccgccgccgtcc 1852172
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 305      tcgccgtccacggcgccgcc 324
                ||||||||||||||||||||
Sbjct: 25467497 tcgccgtccacggcgccgcc 25467516
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>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence
          Length = 94287

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cggccggggagtcggcgacg 113
             ||||||||||||||||||||
Sbjct: 60170 cggccggggagtcggcgacg 60151
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>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1643_A10
          Length = 130037

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    tcgccgtccacggcgccgcc 324
              ||||||||||||||||||||
Sbjct: 123159 tcgccgtccacggcgccgcc 123178
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>dbj|AP004069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1626_B09
          Length = 58749

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tcgccgtccacggcgccgcc 324
             ||||||||||||||||||||
Sbjct: 12047 tcgccgtccacggcgccgcc 12066
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>dbj|AP004632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0623F08
          Length = 154540

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 361    ggcgtccttgctcttgccgccgcc 384
              ||||||||| ||||||||||||||
Sbjct: 123262 ggcgtccttcctcttgccgccgcc 123285
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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1323_A06
          Length = 95665

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 361  ggcgtccttgctcttgccgccgcc 384
            ||||||||| ||||||||||||||
Sbjct: 1586 ggcgtccttcctcttgccgccgcc 1609
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>dbj|AK121240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023097I24, full
            insert sequence
          Length = 2527

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 361  ggcgtccttgctcttgccgccgcc 384
            ||||||||| ||||||||||||||
Sbjct: 2138 ggcgtccttcctcttgccgccgcc 2115
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>dbj|AK106111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D11, full
            insert sequence
          Length = 1701

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcgccgtccacggcgccgcc 324
            ||||||||||||||||||||
Sbjct: 981  tcgccgtccacggcgccgcc 1000
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>dbj|AK104431.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-H12, full
            insert sequence
          Length = 1704

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcgccgtccacggcgccgcc 324
            ||||||||||||||||||||
Sbjct: 984  tcgccgtccacggcgccgcc 1003
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>dbj|AK104329.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E12, full
            insert sequence
          Length = 1700

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcgccgtccacggcgccgcc 324
            ||||||||||||||||||||
Sbjct: 981  tcgccgtccacggcgccgcc 1000
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>dbj|AK071869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118K14, full
            insert sequence
          Length = 1807

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcgccgtccacggcgccgcc 324
            ||||||||||||||||||||
Sbjct: 1104 tcgccgtccacggcgccgcc 1123
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>dbj|AK069959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G19, full
            insert sequence
          Length = 1720

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 305  tcgccgtccacggcgccgcc 324
            ||||||||||||||||||||
Sbjct: 985  tcgccgtccacggcgccgcc 1004
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>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   cacgccggggtcgccgccgc 218
             ||||||||||||||||||||
Sbjct: 22443 cacgccggggtcgccgccgc 22462
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>gb|AC115296.6| Mus musculus BAC clone RP23-195I8 from chromosome 12, complete sequence
          Length = 211561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 286    catcccctgcttcttctttt 305
              ||||||||||||||||||||
Sbjct: 203722 catcccctgcttcttctttt 203741
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>emb|X97257.1|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,8,8.5,9,10,11,12,13] genes
          Length = 11059

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 308  ccgtccacggcgccgccgtc 327
            ||||||||||||||||||||
Sbjct: 6277 ccgtccacggcgccgccgtc 6258
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>emb|CT009700.8| Mouse DNA sequence from clone RP23-114M15 on chromosome 13, complete
             sequence
          Length = 184143

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   tgcttctgcttgtccttggg 171
             ||||||||||||||||||||
Sbjct: 14298 tgcttctgcttgtccttggg 14279


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,471,331
Number of Sequences: 3902068
Number of extensions: 3471331
Number of successful extensions: 66326
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65722
Number of HSP's gapped (non-prelim): 604
length of query: 413
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 391
effective length of database: 17,147,199,772
effective search space: 6704555110852
effective search space used: 6704555110852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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