Clone Name | rbart25a03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | YCF1_ADICA (Q85FG7) Hypothetical 199.0 kDa protein ycf1 | 30 | 2.2 | 2 | NPD_METCA (Q607X6) NAD-dependent deacetylase (EC 3.5.1.-) (Regul... | 30 | 2.9 | 3 | CLC10_HUMAN (Q8IUN9) C-type lectin domain family 10 member A (C-... | 29 | 4.9 |
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>YCF1_ADICA (Q85FG7) Hypothetical 199.0 kDa protein ycf1| Length = 1691 Score = 30.0 bits (66), Expect = 2.2 Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 11/82 (13%) Frame = +2 Query: 11 AHFLRLIFI---LHGKCMPTVLYNNGRLPSA---SCYRNIHNASY-----HICHDQNLKQ 157 AH LRL+F L K + +L GRL YRN++N SY HI ++N KQ Sbjct: 1528 AHRLRLVFDDQDLLYKIINPLLKFKGRLRGIFRRRLYRNVYNGSYISNLSHILTERNCKQ 1587 Query: 158 RNAKNFAGAASTAVQTVKEFRF 223 N S + +EFRF Sbjct: 1588 SCLYNIDDLLSP--RRRREFRF 1607
>NPD_METCA (Q607X6) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein| SIR2 homolog) Length = 255 Score = 29.6 bits (65), Expect = 2.9 Identities = 14/40 (35%), Positives = 17/40 (42%) Frame = +2 Query: 293 VDGAHDVGSNGDAARDHCQSDHHRCHCLVFPLRYPMNIPE 412 VD H+ + D R H H RC P R P IP+ Sbjct: 103 VDDLHERAGSADPIRLHGSLHHPRCSACEAPYRLPPGIPD 142
>CLC10_HUMAN (Q8IUN9) C-type lectin domain family 10 member A (C-type lectin| superfamily member 14) (Macrophage lectin 2) (CD301 antigen) Length = 316 Score = 28.9 bits (63), Expect = 4.9 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Frame = -2 Query: 349 LAVITSSIAIASNVMSSINGEVKGVNAVAS*HVQYLQFYYRAKSKFFHCLHC-SACGP 179 + +TS + ++S+ EV+G V LQ + K+ HC HC S C P Sbjct: 87 IQALTSQGSSLEETIASLKAEVEGFKQERQAGVSELQEHTTQKAHLGHCPHCPSVCVP 144 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,327,463 Number of Sequences: 219361 Number of extensions: 899022 Number of successful extensions: 1884 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1817 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1883 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)