ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart25a02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1... 59 8e-09
2HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3... 55 8e-08
3HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2... 54 1e-07
4DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltrans... 39 0.006
5SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-2... 32 0.99
6SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap) (SNAP-25-... 32 0.99
7UBP10_MOUSE (P52479) Ubiquitin carboxyl-terminal hydrolase 10 (E... 32 0.99
8SMA3_CAEEL (P45896) Dwarfin sma-3 (MAD protein homolog 2) 31 1.3
9BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231) 31 1.7
10SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3... 31 1.7
11BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-Co... 30 2.2
12XRCC1_HUMAN (P18887) DNA-repair protein XRCC1 (X-ray repair cros... 30 2.2
13ZP4_RABIT (Q00193) Zona pellucida sperm-binding protein 4 precur... 30 3.8
14K1C23_HUMAN (Q9C075) Keratin, type I cytoskeletal 23 (Cytokerati... 30 3.8
15PROC_HUMAN (P04070) Vitamin K-dependent protein C precursor (EC ... 29 4.9
16SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1... 29 4.9
17CNOT4_HUMAN (O95628) CCR4-NOT transcription complex subunit 4 (E... 29 4.9
18SDK_CAEEL (Q9N3X8) Protein sidekick homolog precursor (Neuronal ... 29 4.9
19CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-... 29 4.9
20Y1073_METKA (Q8TWG2) UPF0290 protein MK1073 29 6.4
21OPN3_MOUSE (Q9WUK7) Opsin-3 (Encephalopsin) (Panopsin) 29 6.4
22PRLB_ACHLY (P27458) Beta-lytic metalloendopeptidase precursor (E... 29 6.4
23CHS2_PARBR (Q92444) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP ... 29 6.4
24MYCN_CHICK (P18444) N-myc proto-oncogene protein 29 6.4
25H6ST1_CHICK (Q76KB2) Heparan-sulfate 6-O-sulfotransferase 1 (EC ... 29 6.4
26DCHS_DROME (Q05733) Histidine decarboxylase (EC 4.1.1.22) (HDC) 28 8.4
27SCEL_MOUSE (Q9EQG3) Sciellin 28 8.4
28NECP1_RAT (P69682) Adaptin ear-binding coat-associated protein 1... 28 8.4

>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1)
          Length = 445

 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 5/125 (4%)
 Frame = -2

Query: 450 SAAVKDVVSGTLASVASRVKATTEQLDDELLRSAIDYFEMEAAKGGRPENRGNLPETEL- 274
           +A V D+    L   A +V+   + LDD+ LRSAID+ E   +K G P      PE  L 
Sbjct: 319 TATVGDLSCNPLTDTAGKVQEALKGLDDDYLRSAIDHTE---SKPGLPVPYMGSPEKTLY 375

Query: 273 ---RMNSWFHLPIYDANFGWGKPRVMTRAETVRGGWVYVM-AGCGDGSARVLISLEAATL 106
               +NSW  +P    +FGWG P     +     G  +++ +  GDGS  + I+L ++ L
Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSHL 435

Query: 105 KKFER 91
            +F++
Sbjct: 436 SRFKK 440



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>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3)
          Length = 445

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
 Frame = -2

Query: 450 SAAVKDVVSGTLASVASRVKATTEQLDDELLRSAIDYFEMEAAKGGRPENRGNLPETEL- 274
           +A V D+    L   A +V+   + LDD+ LRSAID+ E   +K   P      PE  L 
Sbjct: 319 TATVGDLACNPLTDTAGKVQEALKGLDDDYLRSAIDHTE---SKPDLPVPYMGSPEKTLY 375

Query: 273 ---RMNSWFHLPIYDANFGWGKPRVMTRAETVRGGWVYVM-AGCGDGSARVLISLEAATL 106
               +NSW  +P    +FGWG P     +     G  +++ +  GDGS  + I+L ++ L
Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 435

Query: 105 KKFER 91
             F++
Sbjct: 436 SLFKK 440



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>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)|
           (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2)
          Length = 446

 Score = 54.3 bits (129), Expect = 1e-07
 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%)
 Frame = -2

Query: 450 SAAVKDVVSGTLASVASRVKATTEQLDDELLRSAIDYFEMEAAKGGRPENRGNLPETEL- 274
           +A V D+    L   A +V+   + LDD+ LRSAID+ E   +K   P      PE  L 
Sbjct: 320 TATVGDLSCNPLTDTAGKVQEALKGLDDDYLRSAIDHTE---SKPDLPVPYMGSPEKTLY 376

Query: 273 ---RMNSWFHLPIYDANFGWGKPRVMTRAETVRGGWVYVM-AGCGDGSARVLISLEAATL 106
               +NSW  +P    +FGWG P     +     G  +++ +  GDGS  + I+L ++ L
Sbjct: 377 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 436

Query: 105 KKFER 91
             F++
Sbjct: 437 SLFKK 441



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>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC|
           2.3.1.-) (DBTNBT)
          Length = 441

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
 Frame = -2

Query: 456 FASAAVKDVVSGTLASVASRVKATTEQLDDELLRSAI--DYFEMEAAKGGRPENRGNLPE 283
           +A   V+D+++G+L      +K     L D   RS +  + + ++  K           +
Sbjct: 306 YAMDNVQDLLNGSLLRAIMIIKKAKADLKDNYSRSRVVTNPYSLDVNKKS---------D 356

Query: 282 TELRMNSWFHLPIYDANFGWGKPRVMTRAETVRGG------WVYVM--AGCGDGSARVLI 127
             L ++ W  L  Y+A+FGWG P  ++  + +  G      ++Y++      DG   +L 
Sbjct: 357 NILALSDWRRLGFYEADFGWGGPLNVSSLQRLENGLPMFSTFLYLLPAKNKSDGIKLLLS 416

Query: 126 SLEAATLKKFE 94
            +   TLK F+
Sbjct: 417 CMPPTTLKSFK 427



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>SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1250

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +3

Query: 78  IRQALVRTS*ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRS 233
           +R+ +V  S ES P RRL +         S  P  L   LP+  P  SP+RS
Sbjct: 345 LRREMVYASRESSPTRRLNNLSPASHLASSSPPPGLPSGLPSGLPSGSPSRS 396



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>SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap) (SNAP-25-interacting|
           protein) (SNIP)
          Length = 1197

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = +3

Query: 78  IRQALVRTS*ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRS 233
           +R+ +V  S ES P RRL +         S  P  L   LP+  P  SP+RS
Sbjct: 312 LRREMVYASRESSPTRRLNNLSPASHLASSSPPPGLPSGLPSGLPSGSPSRS 363



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>UBP10_MOUSE (P52479) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 10)
           (Ubiquitin-specific-processing protease 10)
           (Deubiquitinating enzyme 10)
          Length = 792

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 12/51 (23%)
 Frame = +3

Query: 174 PSRLAQSLPASSPVASPTRSWRHIWAD------------ETNCSSAVPSPV 290
           P+  A S   + P++ P +SW  ++ D            ET CS  VPSP+
Sbjct: 316 PAESALSASGAIPISQPAKSWASLFHDSKPSSSSPMAYVETKCSPPVPSPL 366



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>SMA3_CAEEL (P45896) Dwarfin sma-3 (MAD protein homolog 2)|
          Length = 393

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +3

Query: 174 PSRLAQSLPASSPVASPTRSWRHIWADETNCSSAVPSPVGF 296
           P  L  S+P+  P++SP   W+   +   +C+S+ PSP  F
Sbjct: 136 PQGLNSSMPSPQPISSPNTIWQSSGSSTASCASS-PSPSVF 175



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>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 114  PPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPT 227
            PP + L  AR  ++SQP+   S  A S PA  P   P+
Sbjct: 3788 PPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPS 3825



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>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)|
          Length = 474

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 14/88 (15%)
 Frame = -2

Query: 435 DVVSGTLASVASRVKATTEQLDDELLRSAIDYFEMEAAKG-----------GRPENRGNL 289
           + V+ T+ S +S  +    +L D + +   +  +++  KG           G   +   +
Sbjct: 335 NAVNKTINSTSSESQVVLHELHDFIAQMRSEIDKVKGDKGSLEKVIQNFASGHDASIKKI 394

Query: 288 PETELR---MNSWFHLPIYDANFGWGKP 214
            + E+    ++SW  + +Y+ +FGWGKP
Sbjct: 395 NDVEVINFWISSWCRMGLYEIDFGWGKP 422



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>BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,|
           chloroplast precursor (BCCP)
          Length = 262

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 122 KEISTRALPSPQPAITYTQPPRTVSARVITRGFPHPKLA 238
           KE   +  P+PQP++ Y+ PP  +    +    P P LA
Sbjct: 128 KEAMPQPPPAPQPSVVYSPPPPALPPPPVPASTPAPTLA 166



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>XRCC1_HUMAN (P18887) DNA-repair protein XRCC1 (X-ray repair cross-complementing|
           protein 1)
          Length = 633

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 108 ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRS 233
           ESP  +R +      +  PS+ P++L+ S+P    + +PTR+
Sbjct: 240 ESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRT 281



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>ZP4_RABIT (Q00193) Zona pellucida sperm-binding protein 4 precursor (Zona|
           pellucida sperm-binding protein B) (Zona pellucida
           glycoprotein ZP-X) (RC55)
          Length = 540

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +2

Query: 23  NKRIYDHNLACTMLV*TWHTASARSNF---LRVAASKEISTRALPSPQPAITYTQP 181
           ++ IY++ L  T  V TW   S   +    LRV+ S  IS+ ALP     +T   P
Sbjct: 255 DRAIYENELLATREVRTWSRGSITRDSIFRLRVSCSYSISSSALPVDMHVLTLPPP 310



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>K1C23_HUMAN (Q9C075) Keratin, type I cytoskeletal 23 (Cytokeratin-23) (CK-23)|
           (Keratin-23) (K23)
          Length = 422

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 243 YDANFGWGKPRVMTRAETVRGG 178
           + A  GWG+PR   RA TV GG
Sbjct: 16  HGAGGGWGRPRSFPRAPTVHGG 37



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>PROC_HUMAN (P04070) Vitamin K-dependent protein C precursor (EC 3.4.21.69)|
           (Autoprothrombin IIA) (Anticoagulant protein C) (Blood
           coagulation factor XIV) [Contains: Vitamin K-dependent
           protein C light chain; Vitamin K-dependent protein C
           heavy chain; Act
          Length = 461

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 26/117 (22%), Positives = 47/117 (40%)
 Frame = -2

Query: 402 SRVKATTEQLDDELLRSAIDYFEMEAAKGGRPENRGNLPETELRMNSWFHLPIYDANFGW 223
           S +K  TE  +D++    ID         G+   RG+ P   + ++S             
Sbjct: 195 SHLKRDTEDQEDQVDPRLID---------GKMTRRGDSPWQVVLLDS------------- 232

Query: 222 GKPRVMTRAETVRGGWVYVMAGCGDGSARVLISLEAATLKKFERALAVCQVQTSIVH 52
            K ++   A  +   WV   A C D S ++L+ L    L+++E+      ++   VH
Sbjct: 233 -KKKLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVH 288



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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 117 PPRRLVHARCHRRSQ-PSRTPSRLAQSLPASSPVASPTRS 233
           PPRR+     HRRS+ P R   R + SL  SS  +S +RS
Sbjct: 326 PPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRS 365



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>CNOT4_HUMAN (O95628) CCR4-NOT transcription complex subunit 4 (EC 6.3.2.-) (E3|
           ubiquitin protein ligase CNOT4) (CCR4-associated factor
           4) (Potential transcriptional repressor NOT4Hp)
          Length = 575

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 20/61 (32%), Positives = 26/61 (42%)
 Frame = +2

Query: 122 KEISTRALPSPQPAITYTQPPRTVSARVITRGFPHPKLASYMGR*NQLFIRSSVSGRFPL 301
           KE+S +  PS  P         T +A+    GF HP  A+     N  F  S +  RFP 
Sbjct: 421 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTF--SVLPQRFPQ 478

Query: 302 F 304
           F
Sbjct: 479 F 479



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>SDK_CAEEL (Q9N3X8) Protein sidekick homolog precursor (Neuronal IgCAM protein|
           4)
          Length = 2325

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 5/70 (7%)
 Frame = +3

Query: 108 ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRSWRH-----IWADETNCSS 272
           E P     V A  H  + P++   R  +    + P+       R      +W+D T    
Sbjct: 641 EKPAMPERVRAELHNETMPAKVRVRWNEGFDGNEPIIKHAIEMRTMGPTGLWSDWTTAID 700

Query: 273 AVPSPVGFPC 302
            +P   G PC
Sbjct: 701 NIPKEEGKPC 710



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>CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-containing|
           protein 2
          Length = 153

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 21/66 (31%), Positives = 25/66 (37%)
 Frame = +3

Query: 96  RTS*ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRSWRHIWADETNCSSA 275
           RTS  +PP  R    R   R  P+  P   A      SP A+P +         T    A
Sbjct: 8   RTSRVTPPASRAPQMRAAPRRAPAAQPPAAAAPSAVGSPAAAPRQPGLMAQMATTAAGVA 67

Query: 276 VPSPVG 293
           V S VG
Sbjct: 68  VGSAVG 73



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>Y1073_METKA (Q8TWG2) UPF0290 protein MK1073|
          Length = 173

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
 Frame = -2

Query: 279 ELRMNSWFHLPIYDAN-----FGWGKP-----------RVMTRAETVRGGWVYVMAGCGD 148
           EL    WF LP Y AN     FG G+P           R++    T+RG  V V+AG   
Sbjct: 11  ELGKGLWFILPAYIANLSACLFGGGRPLDFGKKLSDGRRLLGDGVTIRGFIVGVLAGAVV 70

Query: 147 GSARVLI 127
           G    L+
Sbjct: 71  GLGEGLV 77



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>OPN3_MOUSE (Q9WUK7) Opsin-3 (Encephalopsin) (Panopsin)|
          Length = 400

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
 Frame = -2

Query: 204 TRAETVRGGWVYVMAGCG----DGSARVLISLEAATLKKFERALAVCQVQTSIVHARL 43
           T A  +R GWV+   GC      GS    +S+   T+  +ER + V       VHAR+
Sbjct: 96  TFASCLRNGWVWDAVGCAWDGFSGSLFGFVSITTLTVLAYERYIRV-------VHARV 146



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>PRLB_ACHLY (P27458) Beta-lytic metalloendopeptidase precursor (EC 3.4.24.32)|
           (Beta-lytic protease)
          Length = 374

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 171 TPS--RLAQSLPASSPVASPTRSWRHIWADETNCSSAVPSPVG 293
           TPS  R+ +S    +P AS  R  R  W   + C+SA+P+  G
Sbjct: 90  TPSARRIVRSASWRAPTASARRPARSRWRCASRCTSAIPTRQG 132



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>CHS2_PARBR (Q92444) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 2) (Class-II chitin
           synthase 2)
          Length = 1043

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +3

Query: 141 RCHRRSQPSRTPSRLAQSLPASSPVASPTRSWRHIWADETNCSSAVPSP 287
           RCH   Q S + S L  S P+SSP  SP  +   + +D  +  +   SP
Sbjct: 35  RCHPLDQQSASTSSLPTSRPSSSPGQSPNITPSILTSDTLHLPARSVSP 83



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>MYCN_CHICK (P18444) N-myc proto-oncogene protein|
          Length = 441

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +3

Query: 114 PPPRRLVHARCHRRSQPSRTPSR--LAQSLP 200
           PPP  +  A C RR QP R P R  L  S+P
Sbjct: 159 PPPPVVPTAACRRREQPQRGPGRAELGGSVP 189



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>H6ST1_CHICK (Q76KB2) Heparan-sulfate 6-O-sulfotransferase 1 (EC 2.8.2.-)|
           (HS6ST-1) (cHS6ST-1)
          Length = 408

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
 Frame = +3

Query: 150 RRSQPSRTPSRLAQSLPASSPVASPTRSWRHIWADET------NCSSAVPSPVGFP 299
           R S P+RTP +         PV+     WRH+    T       C    P+P   P
Sbjct: 164 RESAPNRTPRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELP 219



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>DCHS_DROME (Q05733) Histidine decarboxylase (EC 4.1.1.22) (HDC)|
          Length = 847

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 15/88 (17%)
 Frame = +3

Query: 81  RQALVRTS*ESPPPRRLVHARCHRRSQPS-------RTPSR--------LAQSLPASSPV 215
           RQA ++   E  P    + + C   + PS        TPSR        L  SL  SSP 
Sbjct: 600 RQASIQEDNEESPEETELLSLCRTSNVPSPEHAHSLSTPSRSCSSSSHSLIHSLTQSSPR 659

Query: 216 ASPTRSWRHIWADETNCSSAVPSPVGFP 299
           +SP   +R I        S +  P+  P
Sbjct: 660 SSPVNQFRPITLCAVPSQSQLSMPLAMP 687



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>SCEL_MOUSE (Q9EQG3) Sciellin|
          Length = 652

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 6/53 (11%)
 Frame = +1

Query: 202 RHHPWLPPPEVG------VIYGQMKPTVHPQFRLR*VSPVLWPPALGRLHLEV 342
           +   W PPP  G          +  P +HP    +  SP+  P  LGR + ++
Sbjct: 134 KRQSWFPPPPPGHNASPSTAASRRDPALHPPLPPKPCSPIASPKPLGRTNRQI 186



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>NECP1_RAT (P69682) Adaptin ear-binding coat-associated protein 1 (NECAP-1)|
          Length = 277

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 195 LPASSPVASPTRSWRHIWADETNCSSAVPSPVGFP 299
           +P S+P  +P  +   +W D +  SS+VP+    P
Sbjct: 237 VPTSAPAPAPASTSNDLWGDFSTASSSVPNQAPQP 271


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,077,525
Number of Sequences: 219361
Number of extensions: 1260835
Number of successful extensions: 4708
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4686
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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