Clone Name | rbart25a02 |
---|---|
Clone Library Name | barley_pub |
>HCBT1_DIACA (O24645) Anthranilate N-benzoyltransferase protein 1 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 1) Length = 445 Score = 58.5 bits (140), Expect = 8e-09 Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 5/125 (4%) Frame = -2 Query: 450 SAAVKDVVSGTLASVASRVKATTEQLDDELLRSAIDYFEMEAAKGGRPENRGNLPETEL- 274 +A V D+ L A +V+ + LDD+ LRSAID+ E +K G P PE L Sbjct: 319 TATVGDLSCNPLTDTAGKVQEALKGLDDDYLRSAIDHTE---SKPGLPVPYMGSPEKTLY 375 Query: 273 ---RMNSWFHLPIYDANFGWGKPRVMTRAETVRGGWVYVM-AGCGDGSARVLISLEAATL 106 +NSW +P +FGWG P + G +++ + GDGS + I+L ++ L Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSRDGDGSMTLAINLFSSHL 435 Query: 105 KKFER 91 +F++ Sbjct: 436 SRFKK 440
>HCBT3_DIACA (O23918) Anthranilate N-benzoyltransferase protein 3 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 3) Length = 445 Score = 55.1 bits (131), Expect = 8e-08 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%) Frame = -2 Query: 450 SAAVKDVVSGTLASVASRVKATTEQLDDELLRSAIDYFEMEAAKGGRPENRGNLPETEL- 274 +A V D+ L A +V+ + LDD+ LRSAID+ E +K P PE L Sbjct: 319 TATVGDLACNPLTDTAGKVQEALKGLDDDYLRSAIDHTE---SKPDLPVPYMGSPEKTLY 375 Query: 273 ---RMNSWFHLPIYDANFGWGKPRVMTRAETVRGGWVYVM-AGCGDGSARVLISLEAATL 106 +NSW +P +FGWG P + G +++ + GDGS + I+L ++ L Sbjct: 376 PNVLVNSWGRIPYQAMDFGWGNPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 435 Query: 105 KKFER 91 F++ Sbjct: 436 SLFKK 440
>HCBT2_DIACA (O23917) Anthranilate N-benzoyltransferase protein 2 (EC 2.3.1.144)| (Anthranilate N-hydroxycinnamoyl/benzoyltransferase 2) Length = 446 Score = 54.3 bits (129), Expect = 1e-07 Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 5/125 (4%) Frame = -2 Query: 450 SAAVKDVVSGTLASVASRVKATTEQLDDELLRSAIDYFEMEAAKGGRPENRGNLPETEL- 274 +A V D+ L A +V+ + LDD+ LRSAID+ E +K P PE L Sbjct: 320 TATVGDLSCNPLTDTAGKVQEALKGLDDDYLRSAIDHTE---SKPDLPVPYMGSPEKTLY 376 Query: 273 ---RMNSWFHLPIYDANFGWGKPRVMTRAETVRGGWVYVM-AGCGDGSARVLISLEAATL 106 +NSW +P +FGWG P + G +++ + GDGS + I+L ++ L Sbjct: 377 PNVLVNSWGRIPYQAMDFGWGSPTFFGISNIFYDGQCFLIPSQNGDGSMTLAINLFSSHL 436 Query: 105 KKFER 91 F++ Sbjct: 437 SLFKK 441
>DBNBT_TAXCA (Q8LL69) 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase (EC| 2.3.1.-) (DBTNBT) Length = 441 Score = 38.9 bits (89), Expect = 0.006 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 10/131 (7%) Frame = -2 Query: 456 FASAAVKDVVSGTLASVASRVKATTEQLDDELLRSAI--DYFEMEAAKGGRPENRGNLPE 283 +A V+D+++G+L +K L D RS + + + ++ K + Sbjct: 306 YAMDNVQDLLNGSLLRAIMIIKKAKADLKDNYSRSRVVTNPYSLDVNKKS---------D 356 Query: 282 TELRMNSWFHLPIYDANFGWGKPRVMTRAETVRGG------WVYVM--AGCGDGSARVLI 127 L ++ W L Y+A+FGWG P ++ + + G ++Y++ DG +L Sbjct: 357 NILALSDWRRLGFYEADFGWGGPLNVSSLQRLENGLPMFSTFLYLLPAKNKSDGIKLLLS 416 Query: 126 SLEAATLKKFE 94 + TLK F+ Sbjct: 417 CMPPTTLKSFK 427
>SNIP_MOUSE (Q9QWI6) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1250 Score = 31.6 bits (70), Expect = 0.99 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = +3 Query: 78 IRQALVRTS*ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRS 233 +R+ +V S ES P RRL + S P L LP+ P SP+RS Sbjct: 345 LRREMVYASRESSPTRRLNNLSPASHLASSSPPPGLPSGLPSGLPSGSPSRS 396
>SNIP_RAT (Q9QXY2) p130Cas-associated protein (p140Cap) (SNAP-25-interacting| protein) (SNIP) Length = 1197 Score = 31.6 bits (70), Expect = 0.99 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = +3 Query: 78 IRQALVRTS*ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRS 233 +R+ +V S ES P RRL + S P L LP+ P SP+RS Sbjct: 312 LRREMVYASRESSPTRRLNNLSPASHLASSSPPPGLPSGLPSGLPSGSPSRS 363
>UBP10_MOUSE (P52479) Ubiquitin carboxyl-terminal hydrolase 10 (EC 3.1.2.15)| (Ubiquitin thioesterase 10) (Ubiquitin-specific-processing protease 10) (Deubiquitinating enzyme 10) Length = 792 Score = 31.6 bits (70), Expect = 0.99 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 12/51 (23%) Frame = +3 Query: 174 PSRLAQSLPASSPVASPTRSWRHIWAD------------ETNCSSAVPSPV 290 P+ A S + P++ P +SW ++ D ET CS VPSP+ Sbjct: 316 PAESALSASGAIPISQPAKSWASLFHDSKPSSSSPMAYVETKCSPPVPSPL 366
>SMA3_CAEEL (P45896) Dwarfin sma-3 (MAD protein homolog 2)| Length = 393 Score = 31.2 bits (69), Expect = 1.3 Identities = 14/41 (34%), Positives = 23/41 (56%) Frame = +3 Query: 174 PSRLAQSLPASSPVASPTRSWRHIWADETNCSSAVPSPVGF 296 P L S+P+ P++SP W+ + +C+S+ PSP F Sbjct: 136 PQGLNSSMPSPQPISSPNTIWQSSGSSTASCASS-PSPSVF 175
>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)| Length = 3925 Score = 30.8 bits (68), Expect = 1.7 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +3 Query: 114 PPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPT 227 PP + L AR ++SQP+ S A S PA P P+ Sbjct: 3788 PPQQALTQARLQQQSQPTTRGSAPAASQPAGKPQPGPS 3825
>SALAT_PAPSO (Q94FT4) Salutaridinol 7-O-acetyltransferase (EC 2.3.1.150) (salAT)| Length = 474 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 14/88 (15%) Frame = -2 Query: 435 DVVSGTLASVASRVKATTEQLDDELLRSAIDYFEMEAAKG-----------GRPENRGNL 289 + V+ T+ S +S + +L D + + + +++ KG G + + Sbjct: 335 NAVNKTINSTSSESQVVLHELHDFIAQMRSEIDKVKGDKGSLEKVIQNFASGHDASIKKI 394 Query: 288 PETELR---MNSWFHLPIYDANFGWGKP 214 + E+ ++SW + +Y+ +FGWGKP Sbjct: 395 NDVEVINFWISSWCRMGLYEIDFGWGKP 422
>BCCP_SOYBN (Q42783) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,| chloroplast precursor (BCCP) Length = 262 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = +2 Query: 122 KEISTRALPSPQPAITYTQPPRTVSARVITRGFPHPKLA 238 KE + P+PQP++ Y+ PP + + P P LA Sbjct: 128 KEAMPQPPPAPQPSVVYSPPPPALPPPPVPASTPAPTLA 166
>XRCC1_HUMAN (P18887) DNA-repair protein XRCC1 (X-ray repair cross-complementing| protein 1) Length = 633 Score = 30.4 bits (67), Expect = 2.2 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +3 Query: 108 ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRS 233 ESP +R + + PS+ P++L+ S+P + +PTR+ Sbjct: 240 ESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLPAPTRT 281
>ZP4_RABIT (Q00193) Zona pellucida sperm-binding protein 4 precursor (Zona| pellucida sperm-binding protein B) (Zona pellucida glycoprotein ZP-X) (RC55) Length = 540 Score = 29.6 bits (65), Expect = 3.8 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Frame = +2 Query: 23 NKRIYDHNLACTMLV*TWHTASARSNF---LRVAASKEISTRALPSPQPAITYTQP 181 ++ IY++ L T V TW S + LRV+ S IS+ ALP +T P Sbjct: 255 DRAIYENELLATREVRTWSRGSITRDSIFRLRVSCSYSISSSALPVDMHVLTLPPP 310
>K1C23_HUMAN (Q9C075) Keratin, type I cytoskeletal 23 (Cytokeratin-23) (CK-23)| (Keratin-23) (K23) Length = 422 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -2 Query: 243 YDANFGWGKPRVMTRAETVRGG 178 + A GWG+PR RA TV GG Sbjct: 16 HGAGGGWGRPRSFPRAPTVHGG 37
>PROC_HUMAN (P04070) Vitamin K-dependent protein C precursor (EC 3.4.21.69)| (Autoprothrombin IIA) (Anticoagulant protein C) (Blood coagulation factor XIV) [Contains: Vitamin K-dependent protein C light chain; Vitamin K-dependent protein C heavy chain; Act Length = 461 Score = 29.3 bits (64), Expect = 4.9 Identities = 26/117 (22%), Positives = 47/117 (40%) Frame = -2 Query: 402 SRVKATTEQLDDELLRSAIDYFEMEAAKGGRPENRGNLPETELRMNSWFHLPIYDANFGW 223 S +K TE +D++ ID G+ RG+ P + ++S Sbjct: 195 SHLKRDTEDQEDQVDPRLID---------GKMTRRGDSPWQVVLLDS------------- 232 Query: 222 GKPRVMTRAETVRGGWVYVMAGCGDGSARVLISLEAATLKKFERALAVCQVQTSIVH 52 K ++ A + WV A C D S ++L+ L L+++E+ ++ VH Sbjct: 233 -KKKLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVH 288
>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1| (Plenty-of-prolines 101) Length = 946 Score = 29.3 bits (64), Expect = 4.9 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 117 PPRRLVHARCHRRSQ-PSRTPSRLAQSLPASSPVASPTRS 233 PPRR+ HRRS+ P R R + SL SS +S +RS Sbjct: 326 PPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRS 365
>CNOT4_HUMAN (O95628) CCR4-NOT transcription complex subunit 4 (EC 6.3.2.-) (E3| ubiquitin protein ligase CNOT4) (CCR4-associated factor 4) (Potential transcriptional repressor NOT4Hp) Length = 575 Score = 29.3 bits (64), Expect = 4.9 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = +2 Query: 122 KEISTRALPSPQPAITYTQPPRTVSARVITRGFPHPKLASYMGR*NQLFIRSSVSGRFPL 301 KE+S + PS P T +A+ GF HP A+ N F S + RFP Sbjct: 421 KELSVQDQPSLSPTSLQNSSSHTTTAKGPGSGFLHPAAATNANSLNSTF--SVLPQRFPQ 478 Query: 302 F 304 F Sbjct: 479 F 479
>SDK_CAEEL (Q9N3X8) Protein sidekick homolog precursor (Neuronal IgCAM protein| 4) Length = 2325 Score = 29.3 bits (64), Expect = 4.9 Identities = 16/70 (22%), Positives = 25/70 (35%), Gaps = 5/70 (7%) Frame = +3 Query: 108 ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRSWRH-----IWADETNCSS 272 E P V A H + P++ R + + P+ R +W+D T Sbjct: 641 EKPAMPERVRAELHNETMPAKVRVRWNEGFDGNEPIIKHAIEMRTMGPTGLWSDWTTAID 700 Query: 273 AVPSPVGFPC 302 +P G PC Sbjct: 701 NIPKEEGKPC 710
>CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-containing| protein 2 Length = 153 Score = 29.3 bits (64), Expect = 4.9 Identities = 21/66 (31%), Positives = 25/66 (37%) Frame = +3 Query: 96 RTS*ESPPPRRLVHARCHRRSQPSRTPSRLAQSLPASSPVASPTRSWRHIWADETNCSSA 275 RTS +PP R R R P+ P A SP A+P + T A Sbjct: 8 RTSRVTPPASRAPQMRAAPRRAPAAQPPAAAAPSAVGSPAAAPRQPGLMAQMATTAAGVA 67 Query: 276 VPSPVG 293 V S VG Sbjct: 68 VGSAVG 73
>Y1073_METKA (Q8TWG2) UPF0290 protein MK1073| Length = 173 Score = 28.9 bits (63), Expect = 6.4 Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 16/67 (23%) Frame = -2 Query: 279 ELRMNSWFHLPIYDAN-----FGWGKP-----------RVMTRAETVRGGWVYVMAGCGD 148 EL WF LP Y AN FG G+P R++ T+RG V V+AG Sbjct: 11 ELGKGLWFILPAYIANLSACLFGGGRPLDFGKKLSDGRRLLGDGVTIRGFIVGVLAGAVV 70 Query: 147 GSARVLI 127 G L+ Sbjct: 71 GLGEGLV 77
>OPN3_MOUSE (Q9WUK7) Opsin-3 (Encephalopsin) (Panopsin)| Length = 400 Score = 28.9 bits (63), Expect = 6.4 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = -2 Query: 204 TRAETVRGGWVYVMAGCG----DGSARVLISLEAATLKKFERALAVCQVQTSIVHARL 43 T A +R GWV+ GC GS +S+ T+ +ER + V VHAR+ Sbjct: 96 TFASCLRNGWVWDAVGCAWDGFSGSLFGFVSITTLTVLAYERYIRV-------VHARV 146
>PRLB_ACHLY (P27458) Beta-lytic metalloendopeptidase precursor (EC 3.4.24.32)| (Beta-lytic protease) Length = 374 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%) Frame = +3 Query: 171 TPS--RLAQSLPASSPVASPTRSWRHIWADETNCSSAVPSPVG 293 TPS R+ +S +P AS R R W + C+SA+P+ G Sbjct: 90 TPSARRIVRSASWRAPTASARRPARSRWRCASRCTSAIPTRQG 132
>CHS2_PARBR (Q92444) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 2) (Class-II chitin synthase 2) Length = 1043 Score = 28.9 bits (63), Expect = 6.4 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +3 Query: 141 RCHRRSQPSRTPSRLAQSLPASSPVASPTRSWRHIWADETNCSSAVPSP 287 RCH Q S + S L S P+SSP SP + + +D + + SP Sbjct: 35 RCHPLDQQSASTSSLPTSRPSSSPGQSPNITPSILTSDTLHLPARSVSP 83
>MYCN_CHICK (P18444) N-myc proto-oncogene protein| Length = 441 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 2/31 (6%) Frame = +3 Query: 114 PPPRRLVHARCHRRSQPSRTPSR--LAQSLP 200 PPP + A C RR QP R P R L S+P Sbjct: 159 PPPPVVPTAACRRREQPQRGPGRAELGGSVP 189
>H6ST1_CHICK (Q76KB2) Heparan-sulfate 6-O-sulfotransferase 1 (EC 2.8.2.-)| (HS6ST-1) (cHS6ST-1) Length = 408 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 6/56 (10%) Frame = +3 Query: 150 RRSQPSRTPSRLAQSLPASSPVASPTRSWRHIWADET------NCSSAVPSPVGFP 299 R S P+RTP + PV+ WRH+ T C P+P P Sbjct: 164 RESAPNRTPRKFYYITLLRDPVSRYLSEWRHVQRGATWKTSLHMCDGRTPTPEELP 219
>DCHS_DROME (Q05733) Histidine decarboxylase (EC 4.1.1.22) (HDC)| Length = 847 Score = 28.5 bits (62), Expect = 8.4 Identities = 25/88 (28%), Positives = 34/88 (38%), Gaps = 15/88 (17%) Frame = +3 Query: 81 RQALVRTS*ESPPPRRLVHARCHRRSQPS-------RTPSR--------LAQSLPASSPV 215 RQA ++ E P + + C + PS TPSR L SL SSP Sbjct: 600 RQASIQEDNEESPEETELLSLCRTSNVPSPEHAHSLSTPSRSCSSSSHSLIHSLTQSSPR 659 Query: 216 ASPTRSWRHIWADETNCSSAVPSPVGFP 299 +SP +R I S + P+ P Sbjct: 660 SSPVNQFRPITLCAVPSQSQLSMPLAMP 687
>SCEL_MOUSE (Q9EQG3) Sciellin| Length = 652 Score = 28.5 bits (62), Expect = 8.4 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 6/53 (11%) Frame = +1 Query: 202 RHHPWLPPPEVG------VIYGQMKPTVHPQFRLR*VSPVLWPPALGRLHLEV 342 + W PPP G + P +HP + SP+ P LGR + ++ Sbjct: 134 KRQSWFPPPPPGHNASPSTAASRRDPALHPPLPPKPCSPIASPKPLGRTNRQI 186
>NECP1_RAT (P69682) Adaptin ear-binding coat-associated protein 1 (NECAP-1)| Length = 277 Score = 28.5 bits (62), Expect = 8.4 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +3 Query: 195 LPASSPVASPTRSWRHIWADETNCSSAVPSPVGFP 299 +P S+P +P + +W D + SS+VP+ P Sbjct: 237 VPTSAPAPAPASTSNDLWGDFSTASSSVPNQAPQP 271 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,077,525 Number of Sequences: 219361 Number of extensions: 1260835 Number of successful extensions: 4708 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 4341 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4686 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)