Clone Name | rbart24h04 |
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Clone Library Name | barley_pub |
>gb|AY290735.1| Triticum aestivum cytochrome b5 reductase isoform II-like mRNA, partial sequence Length = 472 Score = 396 bits (200), Expect = e-107 Identities = 267/286 (93%), Gaps = 5/286 (1%) Strand = Plus / Minus Query: 148 tctatacgagctaaatggcatcag--tcagcccatgtcgaaccgaaaat-taataagaat 204 |||| ||||||||||||||||||| |||||||||||| ||| ||||| || ||||||| Sbjct: 288 tctacacgagctaaatggcatcagaatcagcccatgtcaaactgaaaaaatactaagaat 229 Query: 205 ggccatgcgacccgttattttggtagaggcttccaccgtcgaaacttagaactggaactg 264 || |||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 228 ggtcatgcgacccgttattttggtaa--gcttccaccgtcgaaacctagaactggaactg 171 Query: 265 catctccttggtgtagccaaggtcgtctaggtttgcagccatggctttgttcattggagg 324 |||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 170 catctccttggtgtagccaaggtcatccaggtttgcagccatggctttgttcatcggagg 111 Query: 325 aggtccacatctcaatatctgaatgtcggcggcaggcgctgggcagtgagcttggatcat 384 ||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110 aggcccgcatctcaatacctgaatgtcggcggcaggcgctgggcagtgagcttggatcat 51 Query: 385 ttcctttgacacaaacccaacaccaccatcccagacttcaggtggc 430 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50 ttcctttgacacaaacccaacaccaccatcccagacttcaggtggc 5
>gb|AF205603.1|AF205603 Zea mays cytochrome b5 reductase isoform II (NFR II) mRNA, complete cds Length = 1370 Score = 293 bits (148), Expect = 3e-76 Identities = 211/232 (90%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 |||||||||| |||||||||||||| |||||||||||| |||| |||| || ||||||| Sbjct: 1189 cttagaactgaaactgcatctccttcgtgtagccaaggccgtccaggtgcgcggccatgg 1130 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1129 ctttgttcatgggaggaggtccacatcgcaatacctgaatgtcggcggcaggcgctgggc 1070 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | |||| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| | Sbjct: 1069 aatgagtctggatcatttccttcgacacgaacccgacgccaccgtcccagacttcaggag 1010 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatagtttttagccat 480 |||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 1009 gctgattcaagacatagtagatcttgaaacgatcaggatagtttttggccat 958
>gb|AY110029.1| Zea mays CL1597_2 mRNA sequence Length = 823 Score = 280 bits (141), Expect = 4e-72 Identities = 201/221 (90%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||||||||||||||||||||| ||||||||||||||||| |||| || ||||||| Sbjct: 553 cttagaactggaactgcatctccttcgtgtagccaaggtcgtccaggtgcgcggccatgg 494 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 |||||||||| |||||||| ||||||| ||||| |||||||||||||||||||||||||| Sbjct: 493 ctttgttcatgggaggaggcccacatcgcaatacctgaatgtcggcggcaggcgctgggc 434 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | |||| |||||||||||||| ||||| ||||| || ||||| |||||||||||||| | Sbjct: 433 aatgagtctggatcatttccttcgacacgaacccgacgccaccgtcccagacttcaggag 374 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatag 469 |||||||||||||||||||||||||||| ||||| |||||| Sbjct: 373 gctgattcaagacatagtagatcttgaaacgatcgggatag 333
>dbj|AK105459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-E07, full insert sequence Length = 1233 Score = 224 bits (113), Expect = 2e-55 Identities = 194/221 (87%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||| ||||||||||| ||||| ||||||||||| | || |||| | ||||||||| Sbjct: 961 cttagaattggaactgcatttccttcgtgtagccaagattctccaggtgttcagccatgg 902 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 |||||||||| ||||||||||| |||||||||||||||||||| || ||||| || |||| Sbjct: 901 ctttgttcatgggaggaggtccgcatctcaatatctgaatgtcagcagcaggtgccgggc 842 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | || | ||||||||||||| |||||||||||||||||||||||| ||||| ||| || | Sbjct: 841 aatgggtttggatcatttccattgacacaaacccaacaccaccattccagatttctggag 782 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatag 469 ||||||| || |||||||| |||||||||||||| |||||| Sbjct: 781 gctgatttaatacatagtatatcttgaagcgatcgggatag 741
>dbj|AK073699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059L16, full insert sequence Length = 1218 Score = 224 bits (113), Expect = 2e-55 Identities = 194/221 (87%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||| ||||||||||| ||||| ||||||||||| | || |||| | ||||||||| Sbjct: 965 cttagaattggaactgcatttccttcgtgtagccaagattctccaggtgttcagccatgg 906 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 |||||||||| ||||||||||| |||||||||||||||||||| || ||||| || |||| Sbjct: 905 ctttgttcatgggaggaggtccgcatctcaatatctgaatgtcagcagcaggtgccgggc 846 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | || | ||||||||||||| |||||||||||||||||||||||| ||||| ||| || | Sbjct: 845 aatgggtttggatcatttccattgacacaaacccaacaccaccattccagatttctggag 786 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatag 469 ||||||| || |||||||| |||||||||||||| |||||| Sbjct: 785 gctgatttaatacatagtatatcttgaagcgatcgggatag 745
>dbj|AK071883.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046O12, full insert sequence Length = 1359 Score = 224 bits (113), Expect = 2e-55 Identities = 194/221 (87%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||| ||||||||||| ||||| ||||||||||| | || |||| | ||||||||| Sbjct: 967 cttagaattggaactgcatttccttcgtgtagccaagattctccaggtgttcagccatgg 908 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 |||||||||| ||||||||||| |||||||||||||||||||| || ||||| || |||| Sbjct: 907 ctttgttcatgggaggaggtccgcatctcaatatctgaatgtcagcagcaggtgccgggc 848 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | || | ||||||||||||| |||||||||||||||||||||||| ||||| ||| || | Sbjct: 847 aatgggtttggatcatttccattgacacaaacccaacaccaccattccagatttctggag 788 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatag 469 ||||||| || |||||||| |||||||||||||| |||||| Sbjct: 787 gctgatttaatacatagtatatcttgaagcgatcgggatag 747
>gb|AY105771.1| Zea mays PCO074166 mRNA sequence Length = 1305 Score = 214 bits (108), Expect = 2e-52 Identities = 201/232 (86%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||||||||||||||||||||| |||||| || ||||| |||| ||||||||||| Sbjct: 967 cttagaactggaactgcatctcctttgtgtagttgagctcgtcaaggtgtgcagccatgg 908 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 | |||||||| |||||||| |||||||||| ||||||||||| | ||||||||||| | Sbjct: 907 ccttgttcatcggaggaggaccacatctcaggatctgaatgtcctcagcaggcgctggac 848 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | |||| ||||||||||||||| |||||||||||||||||||| | |||| ||||| | Sbjct: 847 aatgagattggatcatttccttagacacaaacccaacaccaccgttccagttctcaggag 788 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatagtttttagccat 480 |||||||||| |||||||||||||| ||||| |||||||| |||| ||||| Sbjct: 787 gctgattcaacacatagtagatcttaaagcggccaggataggttttggccat 736
>gb|AF077372.1|AF077372 Zea mays cytochrome b5 reductase (NFR) mRNA, complete cds Length = 1147 Score = 214 bits (108), Expect = 2e-52 Identities = 201/232 (86%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||||||||||||||||||||| |||||| || ||||| |||| ||||||||||| Sbjct: 881 cttagaactggaactgcatctcctttgtgtagttgagctcgtcaaggtgtgcagccatgg 822 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 | |||||||| |||||||| |||||||||| ||||||||||| | ||||||||||| | Sbjct: 821 ccttgttcatcggaggaggaccacatctcaggatctgaatgtcctcagcaggcgctggac 762 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | |||| ||||||||||||||| |||||||||||||||||||| | |||| ||||| | Sbjct: 761 aatgagattggatcatttccttagacacaaacccaacaccaccgttccagttctcaggag 702 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatagtttttagccat 480 |||||||||| |||||||||||||| ||||| |||||||| |||| ||||| Sbjct: 701 gctgattcaacacatagtagatcttaaagcggccaggataggttttggccat 650
>dbj|AK103964.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-F12, full insert sequence Length = 1266 Score = 206 bits (104), Expect = 5e-50 Identities = 200/232 (86%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||||||||||||||||||||||||||| || || || || |||| |||||||| | Sbjct: 942 cttagaactggaactgcatctccttggtgtacccgagctcatcaaggtgcgcagccattg 883 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 | |||||||| |||||||| ||||| ||||| || |||||||| ||||||| ||||| Sbjct: 882 ccttgttcatcggaggaggaccacacctcaagatttgaatgtcctcggcaggtgctggca 823 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | ||||||| ||||| |||| ||||||||||||||| ||||| | |||||||||||| | Sbjct: 822 aatgagctttaatcatgtcctgtgacacaaacccaacgccaccgttccagacttcaggag 763 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatagtttttagccat 480 ||||||||||||||||||||||||| ||||||||||| ||| |||| ||||| Sbjct: 762 gctgattcaagacatagtagatcttaaagcgatcagggtaggttttggccat 711
>dbj|AK071859.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115I22, full insert sequence Length = 1298 Score = 206 bits (104), Expect = 5e-50 Identities = 200/232 (86%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||||||||||||||||||||||||||| || || || || |||| |||||||| | Sbjct: 958 cttagaactggaactgcatctccttggtgtacccgagctcatcaaggtgcgcagccattg 899 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 | |||||||| |||||||| ||||| ||||| || |||||||| ||||||| ||||| Sbjct: 898 ccttgttcatcggaggaggaccacacctcaagatttgaatgtcctcggcaggtgctggca 839 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | ||||||| ||||| |||| ||||||||||||||| ||||| | |||||||||||| | Sbjct: 838 aatgagctttaatcatgtcctgtgacacaaacccaacgccaccgttccagacttcaggag 779 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatagtttttagccat 480 ||||||||||||||||||||||||| ||||||||||| ||| |||| ||||| Sbjct: 778 gctgattcaagacatagtagatcttaaagcgatcagggtaggttttggccat 727
>dbj|AK058594.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-H01, full insert sequence Length = 1271 Score = 206 bits (104), Expect = 5e-50 Identities = 200/232 (86%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||||||||||||||||||||||||||| || || || || |||| |||||||| | Sbjct: 969 cttagaactggaactgcatctccttggtgtacccgagctcatcaaggtgcgcagccattg 910 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggcaggcgctgggc 368 | |||||||| |||||||| ||||| ||||| || |||||||| ||||||| ||||| Sbjct: 909 ccttgttcatcggaggaggaccacacctcaagatttgaatgtcctcggcaggtgctggca 850 Query: 369 agtgagcttggatcatttcctttgacacaaacccaacaccaccatcccagacttcaggtg 428 | ||||||| ||||| |||| ||||||||||||||| ||||| | |||||||||||| | Sbjct: 849 aatgagctttaatcatgtcctgtgacacaaacccaacgccaccgttccagacttcaggag 790 Query: 429 gctgattcaagacatagtagatcttgaagcgatcaggatagtttttagccat 480 ||||||||||||||||||||||||| ||||||||||| ||| |||| ||||| Sbjct: 789 gctgattcaagacatagtagatcttaaagcgatcagggtaggttttggccat 738
>gb|AF542186.1| Triticum aestivum cytochrome b5 reductase isoform II-like mRNA, complete sequence Length = 803 Score = 165 bits (83), Expect = 2e-37 Identities = 114/121 (94%), Gaps = 4/121 (3%) Strand = Plus / Minus Query: 368 cagtgagcttgga-tcatttcctttga-cacaaa--cccaacaccaccatcccagacttc 423 |||||||| |||| ||||||||||||| |||||| || ||||||||||||||||||||| Sbjct: 753 cagtgagcctggaatcatttcctttgaacacaaaacccnaacaccaccatcccagacttc 694 Query: 424 aggtggctgattcaagacatagtagatcttgaagcgatcaggatagtttttagccatatt 483 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 aggtggctgattcaggacatagtagatcttgaagcgatcaggatagtttttagccatatt 634 Query: 484 g 484 | Sbjct: 633 g 633
>gb|AY819699.1| Vernicia fordii NADH:cytochrome b5 reductase (CBR1A) mRNA, complete cds Length = 843 Score = 125 bits (63), Expect = 1e-25 Identities = 141/167 (84%) Strand = Plus / Minus Query: 299 gcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggca 358 ||||||||||| |||||||| || || ||||||||||||| ||||| || || | ||| Sbjct: 794 gcagccatggccttgttcataggtggtggtccacatctcagaatctggatatcagatgca 735 Query: 359 ggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccaccatcccag 418 || || ||||||||| || |||||||||||||| ||||| ||||| ||||||||||| Sbjct: 734 ggagcagggcagtgattttcaatcatttcctttgatacaaagccaacgccaccatcccat 675 Query: 419 acttcaggtggctgattcaagacatagtagatcttgaagcgatcagg 465 |||||||| ||||||||||| || ||||||| |||||||||||||| Sbjct: 674 acttcaggaggctgattcaaaacgtagtagactttgaagcgatcagg 628
>emb|Y13189.1|HVWL3MRNA Hordeum vulgare mRNA for hypothetical protein, partial, clone WL3 Length = 438 Score = 123 bits (62), Expect = 6e-25 Identities = 143/170 (84%) Strand = Plus / Minus Query: 299 gcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcggcggca 358 |||||||| || |||||||| |||||||| || |||||||| ||||| ||||| | ||| Sbjct: 427 gcagccatcgccttgttcatcggaggagggccgcatctcaagatctggatgtcctcagca 368 Query: 359 ggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccaccatcccag 418 || ||||| |||||| || ||||| |||| |||||||||||||||||||| | |||| Sbjct: 367 ggtgctggacagtgaattttaatcatatcctgggacacaaacccaacaccaccgttccag 308 Query: 419 acttcaggtggctgattcaagacatagtagatcttgaagcgatcaggata 468 |||||||| ||||||||||| || ||| | ||||||||||| |||||||| Sbjct: 307 acttcaggaggctgattcaacacgtagaaaatcttgaagcggtcaggata 258
>ref|NM_121783.2| Arabidopsis thaliana ATCBR AT5G17770 (ATCBR) mRNA, complete cds Length = 1291 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||| || Sbjct: 956 aggtttgcagccatggccttgttcattggcggtggtccgcatcttaggatctgaatatca 897 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 | ||||| || ||||| |||| || |||||||||||||| ||||| |||||||||||| Sbjct: 896 gatgcaggtgcagggcaatgagtctgaatcatttcctttgatacaaatccaacaccacca 837 Query: 413 tcccagacttcaggtggctgattcaagacatagtagat 450 ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 836 tcccatacttccggaggctggttcaaaacatagaagat 799
>gb|AY072482.1| Arabidopsis thaliana NADH-cytochrome b5 reductase (MVA3.13) mRNA, complete cds Length = 630 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||| || Sbjct: 452 aggtttgcagccatggccttgttcattggcggtggtccgcatcttaggatctgaatatca 393 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 | ||||| || ||||| |||| || |||||||||||||| ||||| |||||||||||| Sbjct: 392 gatgcaggtgcagggcaatgagtctgaatcatttcctttgatacaaatccaacaccacca 333 Query: 413 tcccagacttcaggtggctgattcaagacatagtagat 450 ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 332 tcccatacttccggaggctggttcaaaacatagaagat 295
>gb|AY059822.1| Arabidopsis thaliana NADH-cytochrome b5 reductase (MVA3.13) mRNA, complete cds Length = 1396 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||| || Sbjct: 1067 aggtttgcagccatggccttgttcattggcggtggtccgcatcttaggatctgaatatca 1008 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 | ||||| || ||||| |||| || |||||||||||||| ||||| |||||||||||| Sbjct: 1007 gatgcaggtgcagggcaatgagtctgaatcatttcctttgatacaaatccaacaccacca 948 Query: 413 tcccagacttcaggtggctgattcaagacatagtagat 450 ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 947 tcccatacttccggaggctggttcaaaacatagaagat 910
>emb|BX829520.1|CNS0A1GE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZG12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1057 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||| || Sbjct: 802 aggtttgcagccatggccttgttcattggcggtggtccgcatcttaggatctgaatatca 743 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 | ||||| || ||||| |||| || |||||||||||||| ||||| |||||||||||| Sbjct: 742 gatgcaggtgcagggcaatgagtctgaatcatttcctttgatacaaatccaacaccacca 683 Query: 413 tcccagacttcaggtggctgattcaagacatagtagat 450 ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 682 tcccatacttccggaggctggttcaaaacatagaagat 645
>emb|BX829509.1|CNS0A1EP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZE07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1037 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||| || Sbjct: 797 aggtttgcagccatggccttgttcattggcggtggtccgcatcttaggatctgaatatca 738 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 | ||||| || ||||| |||| || |||||||||||||| ||||| |||||||||||| Sbjct: 737 gatgcaggtgcagggcaatgagtctgaatcatttcctttgatacaaatccaacaccacca 678 Query: 413 tcccagacttcaggtggctgattcaagacatagtagat 450 ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 677 tcccatacttccggaggctggttcaaaacatagaagat 640
>emb|BX829414.1|CNS0A18I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB11ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1132 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||| || Sbjct: 836 aggtttgcagccatggccttgttcattggcggtggtccgcatcttaggatctgaatatca 777 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 | ||||| || ||||| |||| || |||||||||||||| ||||| |||||||||||| Sbjct: 776 gatgcaggtgcagggcaatgagtctgaatcatttcctttgatacaaatccaacaccacca 717 Query: 413 tcccagacttcaggtggctgattcaagacatagtagat 450 ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 716 tcccatacttccggaggctggttcaaaacatagaagat 679
>emb|BX832371.1|CNS0A164 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH68ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1123 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||| || Sbjct: 940 aggtttgcagccatggccttgttcattggcggtggtccgcatcttaggatctgaatatca 881 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 | ||||| || ||||| |||| || |||||||||||||| ||||| |||||||||||| Sbjct: 880 gatgcaggtgcagggcaatgagtctgaatcatttcctttgatacaaatccaacaccacca 821 Query: 413 tcccagacttcaggtggctgattcaagacatagtagat 450 ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 820 tcccatacttccggaggctggttcaaaacatagaagat 783
>gb|AY085728.1| Arabidopsis thaliana clone 17432 mRNA, complete sequence Length = 1206 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||| || Sbjct: 956 aggtttgcagccatggccttgttcattggcggtggtccgcatcttaggatctgaatatca 897 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 | ||||| || ||||| |||| || |||||||||||||| ||||| |||||||||||| Sbjct: 896 gatgcaggtgcagggcaatgagtctgaatcatttcctttgatacaaatccaacaccacca 837 Query: 413 tcccagacttcaggtggctgattcaagacatagtagat 450 ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 836 tcccatacttccggaggctggttcaaaacatagaagat 799
>dbj|AB007799.1| Arabidopsis thaliana mRNA for NADH-cytochrome b5 reductase, complete cds Length = 1079 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||||||||| ||||||||||| || ||||| ||||| | |||||||| || Sbjct: 885 aggtttgcagccatggccttgttcattggcggtggtccgcatcttaggatctgaatatca 826 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 | ||||| || ||||| |||| || |||||||||||||| ||||| |||||||||||| Sbjct: 825 gatgcaggtgcagggcaatgagtctgaatcatttcctttgatacaaatccaacaccacca 766 Query: 413 tcccagacttcaggtggctgattcaagacatagtagat 450 ||||| ||||| || ||||| ||||| |||||| |||| Sbjct: 765 tcccatacttccggaggctggttcaaaacatagaagat 728
>gb|AC097175.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1119_H02, complete sequence Length = 138584 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||| ||||||||||| ||||| ||||||||||| | || |||| | ||||||||| Sbjct: 89055 cttagaattggaactgcatttccttcgtgtagccaagattctccaggtgttcagccatgg 88996 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaa 347 |||||||||| ||||||||||| |||||||||||||||| Sbjct: 88995 ctttgttcatgggaggaggtccgcatctcaatatctgaa 88957 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 343 ctgaatgtcggcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaaccc 402 ||||||||| || ||||| || ||||| || | ||||||||||||| ||||||||||||| Sbjct: 88822 ctgaatgtcagcagcaggtgccgggcaatgggtttggatcatttccattgacacaaaccc 88763 Query: 403 aacaccaccatcccagacttcaggtggctg 432 ||||||||||| ||||| ||| || ||||| Sbjct: 88762 aacaccaccattccagatttctggaggctg 88733 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 430 ctgattcaagacatagtagatcttgaagcgatcaggatag 469 |||||| || |||||||| |||||||||||||| |||||| Sbjct: 88558 ctgatttaatacatagtatatcttgaagcgatcgggatag 88519
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 109 bits (55), Expect = 8e-21 Identities = 88/99 (88%) Strand = Plus / Minus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||| ||||||||||| ||||| ||||||||||| | || |||| | ||||||||| Sbjct: 23885220 cttagaattggaactgcatttccttcgtgtagccaagattctccaggtgttcagccatgg 23885161 Query: 309 ctttgttcattggaggaggtccacatctcaatatctgaa 347 |||||||||| ||||||||||| |||||||||||||||| Sbjct: 23885160 ctttgttcatgggaggaggtccgcatctcaatatctgaa 23885122 Score = 83.8 bits (42), Expect = 5e-13 Identities = 78/90 (86%) Strand = Plus / Minus Query: 343 ctgaatgtcggcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaaccc 402 ||||||||| || ||||| || ||||| || | ||||||||||||| ||||||||||||| Sbjct: 23884987 ctgaatgtcagcagcaggtgccgggcaatgggtttggatcatttccattgacacaaaccc 23884928 Query: 403 aacaccaccatcccagacttcaggtggctg 432 ||||||||||| ||||| ||| || ||||| Sbjct: 23884927 aacaccaccattccagatttctggaggctg 23884898 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 430 ctgattcaagacatagtagatcttgaagcgatcaggatag 469 |||||| || |||||||| |||||||||||||| |||||| Sbjct: 23884723 ctgatttaatacatagtatatcttgaagcgatcgggatag 23884684
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 89.7 bits (45), Expect = 8e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||||||||||||||||||||||||||| || || || || |||| |||||||| | Sbjct: 34645675 cttagaactggaactgcatctccttggtgtacccgagctcatcaaggtgcgcagccattg 34645734 Query: 309 ctttgttcattggaggaggtccacatctcaatatctg 345 | |||||||| |||||||| ||||| ||||| ||||| Sbjct: 34645735 ccttgttcatcggaggaggaccacacctcaagatctg 34645771 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 430 ctgattcaagacatagtagatcttgaagcgatcaggatagtttttagccat 480 |||||||||||||||||||||||| ||||||||||| ||| |||| ||||| Sbjct: 34646443 ctgattcaagacatagtagatcttaaagcgatcagggtaggttttggccat 34646493 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 344 tgaatgtcggcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaaccca 403 |||||||| ||||||| ||||| | ||||||| ||||| |||| ||||||||||||| Sbjct: 34645881 tgaatgtcctcggcaggtgctggcaaatgagctttaatcatgtcctgtgacacaaaccca 34645940 Query: 404 acaccaccatcccagacttcaggtggctg 432 || ||||| | |||||||||||| ||||| Sbjct: 34645941 acgccaccgttccagacttcaggaggctg 34645969
>dbj|AP004331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0085D07 Length = 172483 Score = 89.7 bits (45), Expect = 8e-15 Identities = 84/97 (86%) Strand = Plus / Plus Query: 249 cttagaactggaactgcatctccttggtgtagccaaggtcgtctaggtttgcagccatgg 308 ||||||||||||||||||||||||||||||| || || || || |||| |||||||| | Sbjct: 97692 cttagaactggaactgcatctccttggtgtacccgagctcatcaaggtgcgcagccattg 97751 Query: 309 ctttgttcattggaggaggtccacatctcaatatctg 345 | |||||||| |||||||| ||||| ||||| ||||| Sbjct: 97752 ccttgttcatcggaggaggaccacacctcaagatctg 97788 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 430 ctgattcaagacatagtagatcttgaagcgatcaggatagtttttagccat 480 |||||||||||||||||||||||| ||||||||||| ||| |||| ||||| Sbjct: 98460 ctgattcaagacatagtagatcttaaagcgatcagggtaggttttggccat 98510 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 344 tgaatgtcggcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaaccca 403 |||||||| ||||||| ||||| | ||||||| ||||| |||| ||||||||||||| Sbjct: 97898 tgaatgtcctcggcaggtgctggcaaatgagctttaatcatgtcctgtgacacaaaccca 97957 Query: 404 acaccaccatcccagacttcaggtggctg 432 || ||||| | |||||||||||| ||||| Sbjct: 97958 acgccaccgttccagacttcaggaggctg 97986
>gb|AY819698.1| Vernicia fordii NADH:cytochrome b5 reductase (CBR1B) mRNA, complete cds Length = 840 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/160 (81%) Strand = Plus / Minus Query: 290 tctaggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatg 349 ||||||| ||||||||||| || |||||||| ||||||||||| ||||||||||||| Sbjct: 800 tctaggtgagcagccatggccttattcattggtggaggtccacacctcaatatctgaaca 741 Query: 350 tcggcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacacca 409 || | || | | |||||||| ||| ||||||||||| || || ||||| | ||| Sbjct: 740 tctggtgctagtggagggcagtggttttgaatcatttccttggatacgaaccctatgcca 681 Query: 410 ccatcccagacttcaggtggctgattcaagacatagtaga 449 |||||||| ||||||| ||||||||||| |||||||||| Sbjct: 680 ccatcccatccttcaggaggctgattcaaaacatagtaga 641
>gb|AY819697.1| Vernicia fordii NADH:cytochrome b5 reductase (CBR1A) gene, complete cds Length = 3575 Score = 67.9 bits (34), Expect = 3e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 380 atcatttcctttgacacaaacccaacaccaccatcccagacttcaggtggctga 433 |||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||| Sbjct: 3298 atcatttcctttgatacaaagccaacgccaccatcccatacttcaggaggctga 3245 Score = 48.1 bits (24), Expect = 0.027 Identities = 36/40 (90%) Strand = Plus / Minus Query: 299 gcagccatggctttgttcattggaggaggtccacatctca 338 ||||||||||| |||||||| || || ||||||||||||| Sbjct: 3526 gcagccatggccttgttcataggtggtggtccacatctca 3487 Score = 40.1 bits (20), Expect = 6.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 430 ctgattcaagacatagtagatcttgaagcgatcagg 465 ||||||||| || ||||||| |||||||||||||| Sbjct: 2804 ctgattcaaaacgtagtagactttgaagcgatcagg 2769
>dbj|AB007800.1| Arabidopsis thaliana gene for NADH-cytochrome b5 reductase, complete cds Length = 2186 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 380 atcatttcctttgacacaaacccaacaccaccatcccagacttc 423 |||||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 1703 atcatttcctttgatacaaatccaacaccaccatcccatacttc 1660 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatct 336 ||||||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 1992 aggtttgcagccatggccttgttcattggcggtggtccgcatct 1949
>dbj|AB006706.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MVA3 Length = 81701 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 380 atcatttcctttgacacaaacccaacaccaccatcccagacttc 423 |||||||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 47125 atcatttcctttgatacaaatccaacaccaccatcccatacttc 47168 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatct 336 ||||||||||||||||| ||||||||||| || ||||| ||||| Sbjct: 46836 aggtttgcagccatggccttgttcattggcggtggtccgcatct 46879
>emb|BX832891.1|CNS0A0GU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL1ZG02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 922 Score = 48.1 bits (24), Expect = 0.027 Identities = 111/140 (79%) Strand = Plus / Minus Query: 293 aggtttgcagccatggctttgttcattggaggaggtccacatctcaatatctgaatgtcg 352 ||||||||||| ||||| ||||||||||| || ||||| ||||| | |||||||| | Sbjct: 757 aggtttgcagcaatggccttgttcattggcggtggtccgcatctgaggatctgaatatga 698 Query: 353 gcggcaggcgctgggcagtgagcttggatcatttcctttgacacaaacccaacaccacca 412 ||||| || ||||| | || || || ||||||||||| | ||| |||||||||||| Sbjct: 697 aatgcaggtgcagggcaataagtatgaatgatttcctttgataaaaatccaacaccacca 638 Query: 413 tcccagacttcaggtggctg 432 | ||| ||||| || ||||| Sbjct: 637 ttccatacttccggaggctg 618
>emb|AL929087.4| Zebrafish DNA sequence from clone CH211-226M16 in linkage group 23 Contains three novel genes and a CpG island, complete sequence Length = 205160 Score = 44.1 bits (22), Expect = 0.42 Identities = 25/26 (96%) Strand = Plus / Plus Query: 90 ctcaattatggcttgctatcattcat 115 ||||||||| |||||||||||||||| Sbjct: 135251 ctcaattattgcttgctatcattcat 135276
>emb|CR759880.7| Zebrafish DNA sequence from clone DKEY-32O22 in linkage group 9, complete sequence Length = 183450 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 93 aattatggcttgctatcattc 113 ||||||||||||||||||||| Sbjct: 65813 aattatggcttgctatcattc 65793
>gb|AC011246.6| Homo sapiens BAC clone RP11-498O20 from 2, complete sequence Length = 220183 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 423 caggtggctgattcaagacat 443 ||||||||||||||||||||| Sbjct: 125073 caggtggctgattcaagacat 125053
>gb|AC073593.13| Homo sapiens 12 BAC RP11-13J12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153299 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 cagcaaataataataagtcattac 24 |||||| ||||||||||||||||| Sbjct: 91677 cagcaagtaataataagtcattac 91700
>gb|AC102373.13| Mus musculus chromosome 3, clone RP23-263O17, complete sequence Length = 198848 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 acccaacaccaccatcccag 418 |||||||||||||||||||| Sbjct: 180033 acccaacaccaccatcccag 180052
>gb|AC154184.1| Mus musculus BAC clone RP24-67K24 from 13, complete sequence Length = 151468 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 tcaggatagtttttagccat 480 |||||||||||||||||||| Sbjct: 37879 tcaggatagtttttagccat 37860 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,752,168 Number of Sequences: 3902068 Number of extensions: 5752168 Number of successful extensions: 80751 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80647 Number of HSP's gapped (non-prelim): 100 length of query: 484 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 462 effective length of database: 17,147,199,772 effective search space: 7922006294664 effective search space used: 7922006294664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)