ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24h03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_473030.1| Oryza sativa (japonica cultivar-group), predic... 244 2e-61
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 244 2e-61
3dbj|AK105166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 244 2e-61
4gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence 244 2e-61
5gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence 244 2e-61
6emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 244 2e-61
7ref|XM_466643.1| Oryza sativa (japonica cultivar-group), mRNA 153 6e-34
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
9dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
10dbj|AK109261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 6e-34
11emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein 44 0.40
12emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative... 44 0.40
13emb|AJ507098.1|HVU507098 Hordeum vulgare mRNA for NBS-LRR diseas... 44 0.40
14gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intr... 44 0.40
15gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 44 0.40
16gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 gen... 42 1.6
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18dbj|AB110444.1| Oryza sativa (japonica cultivar-group) rf-1gene ... 42 1.6
19dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene f... 42 1.6
20gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.6
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
22gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.3
23ref|XM_957874.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
24ref|XM_328292.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.3
25emb|AL139188.14| Human DNA sequence from clone RP11-90M5 on chro... 40 6.3
26emb|AL135960.1| Human DNA sequence from clone RP1-18D14 on chrom... 40 6.3
27emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.3
28emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome 40 6.3
29emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 6.3
30emb|AJ131016.1|HSA131016 Homo sapiens SCL gene locus 40 6.3
31gb|AF045936.1|AF045936 Buzura suppressaria nucleopolyhedrovirus ... 40 6.3

>ref|XM_473030.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 885

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Minus

                                                                       
Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
           ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 881 agcttggagtagagctgcggcgtgcaccacttgaagaaggtgcccgtggggagctcgccg 822

                                                                       
Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360
           ||||||||||| ||||| || || ||||  |||||  ||||||||| ||||||||| |||
Sbjct: 821 ggcgggagcagggcgaggcgcgccccgatctcggcagcctcctccgcggtgcgcttcccc 762

                                                                       
Query: 361 catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420
           || ||   ||||||||| |||||||||||||||||||||||||||||||||||||| || 
Sbjct: 761 cagccgcgggtcatgtccgtccgcgtgaacccggggcagaagcagttgacgctcacccgg 702

                                                          
Query: 421 tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467
           |||||||  | |||||||||||||||||| || |||| ||| |||||
Sbjct: 701 tcgccgcgcgcctgcagccgccgcgccagcacccgcgcgtacgcgtt 655



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Plus

                                                                            
Query: 241      agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
                ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 24785803 agcttggagtagagctgcggcgtgcaccacttgaagaaggtgcccgtggggagctcgccg 24785862

                                                                            
Query: 301      ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360
                ||||||||||| ||||| || || ||||  |||||  ||||||||| ||||||||| |||
Sbjct: 24785863 ggcgggagcagggcgaggcgcgccccgatctcggcagcctcctccgcggtgcgcttcccc 24785922

                                                                            
Query: 361      catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420
                || ||   ||||||||| |||||||||||||||||||||||||||||||||||||| || 
Sbjct: 24785923 cagccgcgggtcatgtccgtccgcgtgaacccggggcagaagcagttgacgctcacccgg 24785982

                                                               
Query: 421      tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467
                |||||||  | |||||||||||||||||| || |||| ||| |||||
Sbjct: 24785983 tcgccgcgcgcctgcagccgccgcgccagcacccgcgcgtacgcgtt 24786029



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>dbj|AK105166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-E10, full
           insert sequence
          Length = 810

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Minus

                                                                       
Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
           ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 576 agcttggagtagagctgcggcgtgcaccacttgaagaaggtgcccgtggggagctcgccg 517

                                                                       
Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360
           ||||||||||| ||||| || || ||||  |||||  ||||||||| ||||||||| |||
Sbjct: 516 ggcgggagcagggcgaggcgcgccccgatctcggcagcctcctccgcggtgcgcttcccc 457

                                                                       
Query: 361 catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420
           || ||   ||||||||| |||||||||||||||||||||||||||||||||||||| || 
Sbjct: 456 cagccgcgggtcatgtccgtccgcgtgaacccggggcagaagcagttgacgctcacccgg 397

                                                          
Query: 421 tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467
           |||||||  | |||||||||||||||||| || |||| ||| |||||
Sbjct: 396 tcgccgcgcgcctgcagccgccgcgccagcacccgcgcgtacgcgtt 350



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>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence
          Length = 282600

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Minus

                                                                          
Query: 241    agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
              ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| ||
Sbjct: 218536 agcttggagtagagctgcggcgtgcaccacttgaagaaggtccccgtggggagctcggcg 218477

                                                                          
Query: 301    ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360
              ||||  ||||| |||||||| ||| ||| ||||||| ||||||| | ||||||||| |||
Sbjct: 218476 ggcgccagcagcgcgagccgcgcggcgacgtcggccgcctcctcggcggtgcgcttcccc 218417

                                                                          
Query: 361    catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420
              || |||||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 218416 cagcccttggtcatgcccgtgcgcgtgaacccggggcagaagcagttgacgctcacgcgc 218357

                                                             
Query: 421    tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467
               ||||||  | |||||||||||||||||| |  |||| |||||||||
Sbjct: 218356 gcgccgcgcgcctgcagccgccgcgccagcagccgcgagtaggcgtt 218310



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>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence
          Length = 339089

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Minus

                                                                          
Query: 241    agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
              ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| ||
Sbjct: 225396 agcttggagtagagctgcggcgtgcaccacttgaagaaggtccccgtggggagctcggcg 225337

                                                                          
Query: 301    ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360
              ||||  ||||| |||||||| ||| ||| ||||||| ||||||| | ||||||||| |||
Sbjct: 225336 ggcgccagcagcgcgagccgcgcggcgacgtcggccgcctcctcggcggtgcgcttcccc 225277

                                                                          
Query: 361    catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420
              || |||||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 225276 cagcccttggtcatgcccgtgcgcgtgaacccggggcagaagcagttgacgctcacgcgc 225217

                                                             
Query: 421    tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467
               ||||||  | |||||||||||||||||| |  |||| |||||||||
Sbjct: 225216 gcgccgcgcgcctgcagccgccgcgccagcagccgcgagtaggcgtt 225170



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>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
             complete sequence
          Length = 170765

 Score =  244 bits (123), Expect = 2e-61
 Identities = 201/227 (88%)
 Strand = Plus / Plus

                                                                         
Query: 241   agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
             ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 47519 agcttggagtagagctgcggcgtgcaccacttgaagaaggtgcccgtggggagctcgccg 47578

                                                                         
Query: 301   ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360
             ||||||||||| ||||| || || ||||  |||||  ||||||||| ||||||||| |||
Sbjct: 47579 ggcgggagcagggcgaggcgcgccccgatctcggcagcctcctccgcggtgcgcttcccc 47638

                                                                         
Query: 361   catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420
             || ||   ||||||||| |||||||||||||||||||||||||||||||||||||| || 
Sbjct: 47639 cagccgcgggtcatgtccgtccgcgtgaacccggggcagaagcagttgacgctcacccgg 47698

                                                            
Query: 421   tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467
             |||||||  | |||||||||||||||||| || |||| ||| |||||
Sbjct: 47699 tcgccgcgcgcctgcagccgccgcgccagcacccgcgcgtacgcgtt 47745



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>ref|XM_466643.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1124

 Score =  153 bits (77), Expect = 6e-34
 Identities = 163/189 (86%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
           ||||||||||||||||| ||||||| ||||||||||||  ||||||||||||| ||||||
Sbjct: 953 agcttggagtagagctggggcgtgcaccacttgaagaacttgccggtggggaggtcgccg 894

                                                                       
Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggcc-acctcctccggggtgcgcttgcc 359
           ||||||||||| ||||| | |||| ||| | |||||  ||||||| | ||||||  ||||
Sbjct: 893 ggcgggagcagcgcgaggccggcggcgacg-cggccggcctcctcggcggtgcgggtgcc 835

                                                                       
Query: 360 ccatcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcg 419
           ||| ||   |||||||||||| ||||||||||||||||||||||||||||||   |||||
Sbjct: 834 ccagccgcgggtcatgtcggtgcgcgtgaacccggggcagaagcagttgacggcgacgcg 775

                    
Query: 420 ctcgccgcc 428
            ||||||||
Sbjct: 774 gtcgccgcc 766



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  153 bits (77), Expect = 6e-34
 Identities = 163/189 (86%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                            
Query: 241      agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
                ||||||||||||||||| ||||||| ||||||||||||  ||||||||||||| ||||||
Sbjct: 23848755 agcttggagtagagctggggcgtgcaccacttgaagaacttgccggtggggaggtcgccg 23848814

                                                                            
Query: 301      ggcgggagcagagcgagccgggcgccgaagtcggcc-acctcctccggggtgcgcttgcc 359
                ||||||||||| ||||| | |||| ||| | |||||  ||||||| | ||||||  ||||
Sbjct: 23848815 ggcgggagcagcgcgaggccggcggcgacg-cggccggcctcctcggcggtgcgggtgcc 23848873

                                                                            
Query: 360      ccatcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcg 419
                ||| ||   |||||||||||| ||||||||||||||||||||||||||||||   |||||
Sbjct: 23848874 ccagccgcgggtcatgtcggtgcgcgtgaacccggggcagaagcagttgacggcgacgcg 23848933

                         
Query: 420      ctcgccgcc 428
                 ||||||||
Sbjct: 23848934 gtcgccgcc 23848942



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>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030C08
          Length = 163423

 Score =  153 bits (77), Expect = 6e-34
 Identities = 163/189 (86%), Gaps = 2/189 (1%)
 Strand = Plus / Plus

                                                                         
Query: 241   agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
             ||||||||||||||||| ||||||| ||||||||||||  ||||||||||||| ||||||
Sbjct: 70421 agcttggagtagagctggggcgtgcaccacttgaagaacttgccggtggggaggtcgccg 70480

                                                                         
Query: 301   ggcgggagcagagcgagccgggcgccgaagtcggcc-acctcctccggggtgcgcttgcc 359
             ||||||||||| ||||| | |||| ||| | |||||  ||||||| | ||||||  ||||
Sbjct: 70481 ggcgggagcagcgcgaggccggcggcgacg-cggccggcctcctcggcggtgcgggtgcc 70539

                                                                         
Query: 360   ccatcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcg 419
             ||| ||   |||||||||||| ||||||||||||||||||||||||||||||   |||||
Sbjct: 70540 ccagccgcgggtcatgtcggtgcgcgtgaacccggggcagaagcagttgacggcgacgcg 70599

                      
Query: 420   ctcgccgcc 428
              ||||||||
Sbjct: 70600 gtcgccgcc 70608



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>dbj|AK109261.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-B01, full
           insert sequence
          Length = 1124

 Score =  153 bits (77), Expect = 6e-34
 Identities = 163/189 (86%), Gaps = 2/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300
           ||||||||||||||||| ||||||| ||||||||||||  ||||||||||||| ||||||
Sbjct: 953 agcttggagtagagctggggcgtgcaccacttgaagaacttgccggtggggaggtcgccg 894

                                                                       
Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggcc-acctcctccggggtgcgcttgcc 359
           ||||||||||| ||||| | |||| ||| | |||||  ||||||| | ||||||  ||||
Sbjct: 893 ggcgggagcagcgcgaggccggcggcgacg-cggccggcctcctcggcggtgcgggtgcc 835

                                                                       
Query: 360 ccatcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcg 419
           ||| ||   |||||||||||| ||||||||||||||||||||||||||||||   |||||
Sbjct: 834 ccagccgcgggtcatgtcggtgcgcgtgaacccggggcagaagcagttgacggcgacgcg 775

                    
Query: 420 ctcgccgcc 428
            ||||||||
Sbjct: 774 gtcgccgcc 766



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>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
          Length = 1020

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 276 gaaggtgccggtggggagctcgccgg 301
           ||||||||||||||||||| ||||||
Sbjct: 462 gaaggtgccggtggggagcccgccgg 437



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>emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic
           protein (TIP)
          Length = 1146

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 276 gaaggtgccggtggggagctcgccgg 301
           ||||||||||||||||||| ||||||
Sbjct: 478 gaaggtgccggtggggagcccgccgg 453



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>emb|AJ507098.1|HVU507098 Hordeum vulgare mRNA for NBS-LRR disease resistance protein homologue
            (rga S-L8 gene)
          Length = 3261

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 331  tcggccacctcctccggggtgc 352
            ||||||||||||||||||||||
Sbjct: 1637 tcggccacctcctccggggtgc 1616



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>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA,
           complete cds
          Length = 1133

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 276 gaaggtgccggtggggagctcgccgg 301
           ||||||||||||||||||| ||||||
Sbjct: 493 gaaggtgccggtggggagcccgccgg 468



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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 330     gtcggccacctcctccggggtg 351
               ||||||||||||||||||||||
Sbjct: 1451525 gtcggccacctcctccggggtg 1451504



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>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete
             sequence
          Length = 136120

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 109   ctaaactgaaacagaacatat 129
             |||||||||||||||||||||
Sbjct: 82071 ctaaactgaaacagaacatat 82091



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 109      ctaaactgaaacagaacatat 129
                |||||||||||||||||||||
Sbjct: 18424622 ctaaactgaaacagaacatat 18424602



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>dbj|AB110444.1| Oryza sativa (japonica cultivar-group) rf-1gene for fertility restorer,
             hypothetical proteins, complete cds
          Length = 45315

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   ctaaactgaaacagaacatat 129
             |||||||||||||||||||||
Sbjct: 28472 ctaaactgaaacagaacatat 28452



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>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer,
             PPR794, PPR683, PPR762 genes for hypothetical protein,
             complete cds
          Length = 76363

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   ctaaactgaaacagaacatat 129
             |||||||||||||||||||||
Sbjct: 25663 ctaaactgaaacagaacatat 25643



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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 407     tgacgctcacgcgctcgccgc 427
               |||||||||||||||||||||
Sbjct: 3701302 tgacgctcacgcgctcgccgc 3701282



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 109      ctaaactgaaacagaacatat 129
                |||||||||||||||||||||
Sbjct: 18434675 ctaaactgaaacagaacatat 18434655



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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 415    acgcgctcgccgccggactg 434
              ||||||||||||||||||||
Sbjct: 158780 acgcgctcgccgccggactg 158761



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>ref|XM_957874.1| Neurospora crassa OR74A hypothetical protein (NCU07587.1) partial
           mRNA
          Length = 2877

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 cttgaagaaggtgccggtgg 289
           ||||||||||||||||||||
Sbjct: 585 cttgaagaaggtgccggtgg 566



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>ref|XM_328292.1| Neurospora crassa OR74A hypothetical protein (NCU07587.1) partial
           mRNA
          Length = 2877

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 270 cttgaagaaggtgccggtgg 289
           ||||||||||||||||||||
Sbjct: 585 cttgaagaaggtgccggtgg 566



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>emb|AL139188.14| Human DNA sequence from clone RP11-90M5 on chromosome 13q12.11-12.3
             Contains 2 novel genes, a translocase of inner
             mitochondrial membrane 8 (yeast) homolog B (TIMM8B)
             pseudogene, the 5' end of the UBL3 gene for ubiquitin-like
             3 and a CpG island, complete sequence
          Length = 161538

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    caaagcagtgggatgagtgg 46
             ||||||||||||||||||||
Sbjct: 65221 caaagcagtgggatgagtgg 65240



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>emb|AL135960.1| Human DNA sequence from clone RP1-18D14 on chromosome 1 Contains the 3'
             end of the gene for cytochrome P450 4Z1 (CYP4Z1), the gene
             for a novel protein similar to cytochrome P450 family 4
             subfamily A polypeptide 11 (CYP4A11) (LOC284541), a NADH
             dehydrogenase 1 mitochondrial pseudogene, three novel
             genes, the gene for membrane-associated protein 17
             (MAP17), the TAL1 gene for T-cell acute lymphocytic
             leukemia 1, the 3' end of the SIL gene for TAL1 (SCL)
             interrupting locus and a CpG island, complete sequence
          Length = 193358

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    gatccaaagcagtgggatga 42
             ||||||||||||||||||||
Sbjct: 66233 gatccaaagcagtgggatga 66252



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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 412     ctcacgcgctcgccgccgga 431
               ||||||||||||||||||||
Sbjct: 3864950 ctcacgcgctcgccgccgga 3864931



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>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome
          Length = 3523383

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 227     atcctctgcctcaaagcttg 246
               ||||||||||||||||||||
Sbjct: 2977866 atcctctgcctcaaagcttg 2977847



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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 416   cgcgctcgccgccggactgc 435
             ||||||||||||||||||||
Sbjct: 98196 cgcgctcgccgccggactgc 98215



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>emb|AJ131016.1|HSA131016 Homo sapiens SCL gene locus
          Length = 193471

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 23    gatccaaagcagtgggatga 42
             ||||||||||||||||||||
Sbjct: 66233 gatccaaagcagtgggatga 66252



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>gb|AF045936.1|AF045936 Buzura suppressaria nucleopolyhedrovirus polyhedron envelope
           protein (pep) gene, partial cds; conotoxin-like protein
           (ctl) and apoptosis inhibitor IAP-1 (iap1) genes,
           complete cds; superoxide dismutase (sod) gene, partial
           cds; and unknown gene
          Length = 3248

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  gaactaacaacaacggtggc 109
           ||||||||||||||||||||
Sbjct: 13  gaactaacaacaacggtggc 32


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,991,073
Number of Sequences: 3902068
Number of extensions: 2991073
Number of successful extensions: 52992
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52559
Number of HSP's gapped (non-prelim): 433
length of query: 468
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 446
effective length of database: 17,147,199,772
effective search space: 7647651098312
effective search space used: 7647651098312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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