Clone Name | rbart24h03 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_473030.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 885 Score = 244 bits (123), Expect = 2e-61 Identities = 201/227 (88%) Strand = Plus / Minus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 881 agcttggagtagagctgcggcgtgcaccacttgaagaaggtgcccgtggggagctcgccg 822 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360 ||||||||||| ||||| || || |||| ||||| ||||||||| ||||||||| ||| Sbjct: 821 ggcgggagcagggcgaggcgcgccccgatctcggcagcctcctccgcggtgcgcttcccc 762 Query: 361 catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420 || || ||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 761 cagccgcgggtcatgtccgtccgcgtgaacccggggcagaagcagttgacgctcacccgg 702 Query: 421 tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467 ||||||| | |||||||||||||||||| || |||| ||| ||||| Sbjct: 701 tcgccgcgcgcctgcagccgccgcgccagcacccgcgcgtacgcgtt 655
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 244 bits (123), Expect = 2e-61 Identities = 201/227 (88%) Strand = Plus / Plus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 24785803 agcttggagtagagctgcggcgtgcaccacttgaagaaggtgcccgtggggagctcgccg 24785862 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360 ||||||||||| ||||| || || |||| ||||| ||||||||| ||||||||| ||| Sbjct: 24785863 ggcgggagcagggcgaggcgcgccccgatctcggcagcctcctccgcggtgcgcttcccc 24785922 Query: 361 catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420 || || ||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 24785923 cagccgcgggtcatgtccgtccgcgtgaacccggggcagaagcagttgacgctcacccgg 24785982 Query: 421 tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467 ||||||| | |||||||||||||||||| || |||| ||| ||||| Sbjct: 24785983 tcgccgcgcgcctgcagccgccgcgccagcacccgcgcgtacgcgtt 24786029
>dbj|AK105166.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-E10, full insert sequence Length = 810 Score = 244 bits (123), Expect = 2e-61 Identities = 201/227 (88%) Strand = Plus / Minus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 576 agcttggagtagagctgcggcgtgcaccacttgaagaaggtgcccgtggggagctcgccg 517 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360 ||||||||||| ||||| || || |||| ||||| ||||||||| ||||||||| ||| Sbjct: 516 ggcgggagcagggcgaggcgcgccccgatctcggcagcctcctccgcggtgcgcttcccc 457 Query: 361 catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420 || || ||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 456 cagccgcgggtcatgtccgtccgcgtgaacccggggcagaagcagttgacgctcacccgg 397 Query: 421 tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467 ||||||| | |||||||||||||||||| || |||| ||| ||||| Sbjct: 396 tcgccgcgcgcctgcagccgccgcgccagcacccgcgcgtacgcgtt 350
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 244 bits (123), Expect = 2e-61 Identities = 201/227 (88%) Strand = Plus / Minus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| || Sbjct: 218536 agcttggagtagagctgcggcgtgcaccacttgaagaaggtccccgtggggagctcggcg 218477 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360 |||| ||||| |||||||| ||| ||| ||||||| ||||||| | ||||||||| ||| Sbjct: 218476 ggcgccagcagcgcgagccgcgcggcgacgtcggccgcctcctcggcggtgcgcttcccc 218417 Query: 361 catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420 || |||||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 218416 cagcccttggtcatgcccgtgcgcgtgaacccggggcagaagcagttgacgctcacgcgc 218357 Query: 421 tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467 |||||| | |||||||||||||||||| | |||| ||||||||| Sbjct: 218356 gcgccgcgcgcctgcagccgccgcgccagcagccgcgagtaggcgtt 218310
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 244 bits (123), Expect = 2e-61 Identities = 201/227 (88%) Strand = Plus / Minus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||| || Sbjct: 225396 agcttggagtagagctgcggcgtgcaccacttgaagaaggtccccgtggggagctcggcg 225337 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360 |||| ||||| |||||||| ||| ||| ||||||| ||||||| | ||||||||| ||| Sbjct: 225336 ggcgccagcagcgcgagccgcgcggcgacgtcggccgcctcctcggcggtgcgcttcccc 225277 Query: 361 catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420 || |||||||||||| | || ||||||||||||||||||||||||||||||||||||||| Sbjct: 225276 cagcccttggtcatgcccgtgcgcgtgaacccggggcagaagcagttgacgctcacgcgc 225217 Query: 421 tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467 |||||| | |||||||||||||||||| | |||| ||||||||| Sbjct: 225216 gcgccgcgcgcctgcagccgccgcgccagcagccgcgagtaggcgtt 225170
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08, complete sequence Length = 170765 Score = 244 bits (123), Expect = 2e-61 Identities = 201/227 (88%) Strand = Plus / Plus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 47519 agcttggagtagagctgcggcgtgcaccacttgaagaaggtgcccgtggggagctcgccg 47578 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggccacctcctccggggtgcgcttgccc 360 ||||||||||| ||||| || || |||| ||||| ||||||||| ||||||||| ||| Sbjct: 47579 ggcgggagcagggcgaggcgcgccccgatctcggcagcctcctccgcggtgcgcttcccc 47638 Query: 361 catcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcgc 420 || || ||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 47639 cagccgcgggtcatgtccgtccgcgtgaacccggggcagaagcagttgacgctcacccgg 47698 Query: 421 tcgccgccggactgcagccgccgcgccaggacgcgcgtgtaggcgtt 467 ||||||| | |||||||||||||||||| || |||| ||| ||||| Sbjct: 47699 tcgccgcgcgcctgcagccgccgcgccagcacccgcgcgtacgcgtt 47745
>ref|XM_466643.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1124 Score = 153 bits (77), Expect = 6e-34 Identities = 163/189 (86%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 953 agcttggagtagagctggggcgtgcaccacttgaagaacttgccggtggggaggtcgccg 894 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggcc-acctcctccggggtgcgcttgcc 359 ||||||||||| ||||| | |||| ||| | ||||| ||||||| | |||||| |||| Sbjct: 893 ggcgggagcagcgcgaggccggcggcgacg-cggccggcctcctcggcggtgcgggtgcc 835 Query: 360 ccatcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcg 419 ||| || |||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 834 ccagccgcgggtcatgtcggtgcgcgtgaacccggggcagaagcagttgacggcgacgcg 775 Query: 420 ctcgccgcc 428 |||||||| Sbjct: 774 gtcgccgcc 766
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 153 bits (77), Expect = 6e-34 Identities = 163/189 (86%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 23848755 agcttggagtagagctggggcgtgcaccacttgaagaacttgccggtggggaggtcgccg 23848814 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggcc-acctcctccggggtgcgcttgcc 359 ||||||||||| ||||| | |||| ||| | ||||| ||||||| | |||||| |||| Sbjct: 23848815 ggcgggagcagcgcgaggccggcggcgacg-cggccggcctcctcggcggtgcgggtgcc 23848873 Query: 360 ccatcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcg 419 ||| || |||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 23848874 ccagccgcgggtcatgtcggtgcgcgtgaacccggggcagaagcagttgacggcgacgcg 23848933 Query: 420 ctcgccgcc 428 |||||||| Sbjct: 23848934 gtcgccgcc 23848942
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030C08 Length = 163423 Score = 153 bits (77), Expect = 6e-34 Identities = 163/189 (86%), Gaps = 2/189 (1%) Strand = Plus / Plus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 70421 agcttggagtagagctggggcgtgcaccacttgaagaacttgccggtggggaggtcgccg 70480 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggcc-acctcctccggggtgcgcttgcc 359 ||||||||||| ||||| | |||| ||| | ||||| ||||||| | |||||| |||| Sbjct: 70481 ggcgggagcagcgcgaggccggcggcgacg-cggccggcctcctcggcggtgcgggtgcc 70539 Query: 360 ccatcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcg 419 ||| || |||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 70540 ccagccgcgggtcatgtcggtgcgcgtgaacccggggcagaagcagttgacggcgacgcg 70599 Query: 420 ctcgccgcc 428 |||||||| Sbjct: 70600 gtcgccgcc 70608
>dbj|AK109261.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-B01, full insert sequence Length = 1124 Score = 153 bits (77), Expect = 6e-34 Identities = 163/189 (86%), Gaps = 2/189 (1%) Strand = Plus / Minus Query: 241 agcttggagtagagctgcggcgtgcgccacttgaagaaggtgccggtggggagctcgccg 300 ||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||| Sbjct: 953 agcttggagtagagctggggcgtgcaccacttgaagaacttgccggtggggaggtcgccg 894 Query: 301 ggcgggagcagagcgagccgggcgccgaagtcggcc-acctcctccggggtgcgcttgcc 359 ||||||||||| ||||| | |||| ||| | ||||| ||||||| | |||||| |||| Sbjct: 893 ggcgggagcagcgcgaggccggcggcgacg-cggccggcctcctcggcggtgcgggtgcc 835 Query: 360 ccatcccttggtcatgtcggtccgcgtgaacccggggcagaagcagttgacgctcacgcg 419 ||| || |||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 834 ccagccgcgggtcatgtcggtgcgcgtgaacccggggcagaagcagttgacggcgacgcg 775 Query: 420 ctcgccgcc 428 |||||||| Sbjct: 774 gtcgccgcc 766
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 276 gaaggtgccggtggggagctcgccgg 301 ||||||||||||||||||| |||||| Sbjct: 462 gaaggtgccggtggggagcccgccgg 437
>emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic protein (TIP) Length = 1146 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 276 gaaggtgccggtggggagctcgccgg 301 ||||||||||||||||||| |||||| Sbjct: 478 gaaggtgccggtggggagcccgccgg 453
>emb|AJ507098.1|HVU507098 Hordeum vulgare mRNA for NBS-LRR disease resistance protein homologue (rga S-L8 gene) Length = 3261 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 331 tcggccacctcctccggggtgc 352 |||||||||||||||||||||| Sbjct: 1637 tcggccacctcctccggggtgc 1616
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 276 gaaggtgccggtggggagctcgccgg 301 ||||||||||||||||||| |||||| Sbjct: 493 gaaggtgccggtggggagcccgccgg 468
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 330 gtcggccacctcctccggggtg 351 |||||||||||||||||||||| Sbjct: 1451525 gtcggccacctcctccggggtg 1451504
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 ctaaactgaaacagaacatat 129 ||||||||||||||||||||| Sbjct: 82071 ctaaactgaaacagaacatat 82091
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ctaaactgaaacagaacatat 129 ||||||||||||||||||||| Sbjct: 18424622 ctaaactgaaacagaacatat 18424602
>dbj|AB110444.1| Oryza sativa (japonica cultivar-group) rf-1gene for fertility restorer, hypothetical proteins, complete cds Length = 45315 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ctaaactgaaacagaacatat 129 ||||||||||||||||||||| Sbjct: 28472 ctaaactgaaacagaacatat 28452
>dbj|AB110443.1| Oryza sativa (indica cultivar-group) Rf-1 gene for fertility restorer, PPR794, PPR683, PPR762 genes for hypothetical protein, complete cds Length = 76363 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ctaaactgaaacagaacatat 129 ||||||||||||||||||||| Sbjct: 25663 ctaaactgaaacagaacatat 25643
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 tgacgctcacgcgctcgccgc 427 ||||||||||||||||||||| Sbjct: 3701302 tgacgctcacgcgctcgccgc 3701282
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 ctaaactgaaacagaacatat 129 ||||||||||||||||||||| Sbjct: 18434675 ctaaactgaaacagaacatat 18434655
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 acgcgctcgccgccggactg 434 |||||||||||||||||||| Sbjct: 158780 acgcgctcgccgccggactg 158761
>ref|XM_957874.1| Neurospora crassa OR74A hypothetical protein (NCU07587.1) partial mRNA Length = 2877 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cttgaagaaggtgccggtgg 289 |||||||||||||||||||| Sbjct: 585 cttgaagaaggtgccggtgg 566
>ref|XM_328292.1| Neurospora crassa OR74A hypothetical protein (NCU07587.1) partial mRNA Length = 2877 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 cttgaagaaggtgccggtgg 289 |||||||||||||||||||| Sbjct: 585 cttgaagaaggtgccggtgg 566
>emb|AL139188.14| Human DNA sequence from clone RP11-90M5 on chromosome 13q12.11-12.3 Contains 2 novel genes, a translocase of inner mitochondrial membrane 8 (yeast) homolog B (TIMM8B) pseudogene, the 5' end of the UBL3 gene for ubiquitin-like 3 and a CpG island, complete sequence Length = 161538 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 caaagcagtgggatgagtgg 46 |||||||||||||||||||| Sbjct: 65221 caaagcagtgggatgagtgg 65240
>emb|AL135960.1| Human DNA sequence from clone RP1-18D14 on chromosome 1 Contains the 3' end of the gene for cytochrome P450 4Z1 (CYP4Z1), the gene for a novel protein similar to cytochrome P450 family 4 subfamily A polypeptide 11 (CYP4A11) (LOC284541), a NADH dehydrogenase 1 mitochondrial pseudogene, three novel genes, the gene for membrane-associated protein 17 (MAP17), the TAL1 gene for T-cell acute lymphocytic leukemia 1, the 3' end of the SIL gene for TAL1 (SCL) interrupting locus and a CpG island, complete sequence Length = 193358 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gatccaaagcagtgggatga 42 |||||||||||||||||||| Sbjct: 66233 gatccaaagcagtgggatga 66252
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 412 ctcacgcgctcgccgccgga 431 |||||||||||||||||||| Sbjct: 3864950 ctcacgcgctcgccgccgga 3864931
>emb|CR522870.1| Desulfotalea psychrophila LSv54 chromosome Length = 3523383 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 atcctctgcctcaaagcttg 246 |||||||||||||||||||| Sbjct: 2977866 atcctctgcctcaaagcttg 2977847
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 416 cgcgctcgccgccggactgc 435 |||||||||||||||||||| Sbjct: 98196 cgcgctcgccgccggactgc 98215
>emb|AJ131016.1|HSA131016 Homo sapiens SCL gene locus Length = 193471 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 gatccaaagcagtgggatga 42 |||||||||||||||||||| Sbjct: 66233 gatccaaagcagtgggatga 66252
>gb|AF045936.1|AF045936 Buzura suppressaria nucleopolyhedrovirus polyhedron envelope protein (pep) gene, partial cds; conotoxin-like protein (ctl) and apoptosis inhibitor IAP-1 (iap1) genes, complete cds; superoxide dismutase (sod) gene, partial cds; and unknown gene Length = 3248 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaactaacaacaacggtggc 109 |||||||||||||||||||| Sbjct: 13 gaactaacaacaacggtggc 32 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,991,073 Number of Sequences: 3902068 Number of extensions: 2991073 Number of successful extensions: 52992 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52559 Number of HSP's gapped (non-prelim): 433 length of query: 468 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 446 effective length of database: 17,147,199,772 effective search space: 7647651098312 effective search space used: 7647651098312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)