ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24g10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AL2SA_HUMAN (Q53TS8) Amyotrophic lateral sclerosis 2 chromosomal... 29 4.5

>AL2SA_HUMAN (Q53TS8) Amyotrophic lateral sclerosis 2 chromosomal region|
           candidate gene 11 protein
          Length = 623

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -1

Query: 165 KEKEKFRVG*VKLML-RFTRKLCFVCVYLLIVGGLFVPRLIVKYIYKY 25
           +EK  F +G V++ L    +K CF+    ++ G +FV RL V++++ Y
Sbjct: 194 REKRAFLLGSVQIHLYEVIQKGCFIEEVQVLHGNIFVCRLEVEFMFSY 241


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,444,429
Number of Sequences: 219361
Number of extensions: 675551
Number of successful extensions: 1756
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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