ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY103726.1| Zea mays PCO100951 mRNA sequence 188 1e-44
2gb|BT018972.1| Zea mays clone Contig383.F mRNA sequence 180 3e-42
3ref|XM_449996.1| Oryza sativa (japonica cultivar-group), mRNA 168 1e-38
4ref|XM_507424.1| PREDICTED Oryza sativa (japonica cultivar-group... 168 1e-38
5ref|XM_507423.1| PREDICTED Oryza sativa (japonica cultivar-group... 168 1e-38
6ref|XM_507422.1| PREDICTED Oryza sativa (japonica cultivar-group... 168 1e-38
7ref|XM_506631.2| PREDICTED Oryza sativa (japonica cultivar-group... 168 1e-38
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
9dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
10dbj|AK121793.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
11dbj|AK120034.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
12dbj|AK103978.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
13dbj|AK068844.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
14dbj|AK061402.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
15emb|AJ783761.1| Papilio dardanus mRNA for ribosomal protein S13e... 44 0.38
16gb|AC102103.10| Mus musculus chromosome 15, clone RP23-82K1, com... 42 1.5
17gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, com... 42 1.5
18gb|AC134468.4| Mus musculus BAC clone RP23-97J21 from chromosome... 40 6.0
19ref|XM_801351.1| Trypanosoma cruzi strain CL Brener C-1-tetrahyd... 40 6.0
20gb|AC115970.8| Mus musculus chromosome 10, clone RP24-77I13, com... 40 6.0
21emb|AL161628.9| Human DNA sequence from clone RP11-31K16 on chro... 40 6.0
22emb|AL121584.24|HSBA388K2 Human DNA sequence from clone RP11-388... 40 6.0
23gb|AC127789.4| Rattus norvegicus 1 BAC CH230-15M17 (Children's H... 40 6.0
24emb|AL590625.16| Mouse DNA sequence from clone RP23-467M8 on chr... 40 6.0
25dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
26dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
27dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 6.0
28gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, co... 40 6.0
29gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosom... 40 6.0 
>gb|AY103726.1| Zea mays PCO100951 mRNA sequence
          Length = 2440

 Score =  188 bits (95), Expect = 1e-44
 Identities = 149/167 (89%)
 Strand = Plus / Minus

                                                                        
Query: 278  aggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatcagctcgtag 337
            ||||| ||||| ||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 2137 aggcggacggcatccagcttctgcctcagcaccgtgatggcgttcatgatcagctcgtag 2078

                                                                        
Query: 338  gctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttggcgttgatc 397
            |||||||||||||| |||||||| || ||||| || |||||||||||||||||| |||||
Sbjct: 2077 gctgtgatggcgccggttgtttctacggtgaagacgaagctgtcctccttggcggtgatc 2018

                                                           
Query: 398  tctaccaatcctggcttccccatggcctctgctttcttgatcacctc 444
            || ||||| ||||||||||| |||||||| || | ||||||||||||
Sbjct: 2017 tccaccaagcctggcttcccgatggcctcggcgtgcttgatcacctc 1971
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>gb|BT018972.1| Zea mays clone Contig383.F mRNA sequence
          Length = 1275

 Score =  180 bits (91), Expect = 3e-42
 Identities = 148/167 (88%)
 Strand = Plus / Minus

                                                                       
Query: 278 aggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatcagctcgtag 337
           ||||| ||||| ||||||||||||||||| |||||||| || ||||| ||||||||||||
Sbjct: 986 aggcggacggcatccagcttctgcctcagcaccgtgatcgcgttcatgatcagctcgtag 927

                                                                       
Query: 338 gctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttggcgttgatc 397
           ||||||||||| || |||||||| || ||||| || |||||||||||||||||| |||||
Sbjct: 926 gctgtgatggcaccggttgtttctacggtgaagacgaagctgtcctccttggcggtgatc 867

                                                          
Query: 398 tctaccaatcctggcttccccatggcctctgctttcttgatcacctc 444
           || ||||| ||||||||||| |||||||| || | ||||||||||||
Sbjct: 866 tccaccaagcctggcttcccgatggcctcggcgtgcttgatcacctc 820
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>ref|XM_449996.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1306

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1010 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 951

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 950  agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 891

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 890  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 834
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>ref|XM_507424.1| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA
          Length = 1342

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1043 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 984

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 983  agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 924

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 923  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 867
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>ref|XM_507423.1| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA
          Length = 1346

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1043 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 984

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 983  agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 924

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 923  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 867
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>ref|XM_507422.1| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA
          Length = 1666

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1044 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 985

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 984  agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 925

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 924  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 868
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>ref|XM_506631.2| PREDICTED Oryza sativa (japonica cultivar-group), P0646B04.12 mRNA
          Length = 1347

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1086 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 1027

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 1026 agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 967

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 966  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 910
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                          
Query: 269    tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
              |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 880139 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 880080

                                                                          
Query: 329    agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
              ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 880079 agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 880020

                                                                       
Query: 389    gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
              || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 880019 gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 879963
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>dbj|AP005709.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0646B04
          Length = 178896

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                         
Query: 269   tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
             |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 44266 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 44207

                                                                         
Query: 329   agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
             ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 44206 agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 44147

                                                                      
Query: 389   gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
             || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 44146 gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 44090
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>dbj|AK121793.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095G14, full
            insert sequence
          Length = 1347

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1086 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 1027

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 1026 agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 967

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 966  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 910
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>dbj|AK120034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-B04, full
            insert sequence
          Length = 1342

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1043 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 984

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 983  agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 924

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 923  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 867
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>dbj|AK103978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-H08, full
            insert sequence
          Length = 1306

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1010 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 951

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 950  agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 891

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 890  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 834
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>dbj|AK068844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163O03, full
            insert sequence
          Length = 1666

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1044 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 985

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 984  agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 925

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 924  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 868
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>dbj|AK061402.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H09, full
            insert sequence
          Length = 1346

 Score =  168 bits (85), Expect = 1e-38
 Identities = 154/177 (87%)
 Strand = Plus / Minus

                                                                        
Query: 269  tcatcttgcaggcgaacggcgtccagcttctgcctcaggaccgtgatagcattcataatc 328
            |||||||| || ||||| || || | ||| ||||||| |||||||||||| ||||| |||
Sbjct: 1043 tcatcttgtagacgaacagcatctaacttttgcctcaagaccgtgatagcgttcatgatc 984

                                                                        
Query: 329  agctcgtaggctgtgatggcgcctgttgtttccacagtgaacacaaagctgtcctccttg 388
            ||||| || |||||||| ||||| |||||||| |||||||| | ||||||||||||||||
Sbjct: 983  agctcataagctgtgatagcgccagttgtttcaacagtgaagataaagctgtcctccttg 924

                                                                     
Query: 389  gcgttgatctctaccaatcctggcttccccatggcctctgctttcttgatcacctca 445
            || |||||||||| |||||| ||||| |||||||| |||||||||||||| ||||||
Sbjct: 923  gcattgatctctatcaatccgggctttcccatggcatctgctttcttgatgacctca 867
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>emb|AJ783761.1| Papilio dardanus mRNA for ribosomal protein S13e (rpS13e gene)
          Length = 456

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 411 gcttccccatggcctctgctttcttgatca 440
           |||||| ||||||| |||||||||||||||
Sbjct: 301 gcttcctcatggccactgctttcttgatca 272
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>gb|AC102103.10| Mus musculus chromosome 15, clone RP23-82K1, complete sequence
          Length = 237423

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 407   cctggcttccccatggcctct 427
             |||||||||||||||||||||
Sbjct: 89305 cctggcttccccatggcctct 89325
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>gb|AC158970.3| Mus musculus chromosome 15, clone RP24-186A9, complete sequence
          Length = 208509

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 407   cctggcttccccatggcctct 427
             |||||||||||||||||||||
Sbjct: 19651 cctggcttccccatggcctct 19631
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>gb|AC134468.4| Mus musculus BAC clone RP23-97J21 from chromosome 12, complete sequence
          Length = 234400

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    atcaaaggaagcatccatca 130
              ||||||||||||||||||||
Sbjct: 146479 atcaaaggaagcatccatca 146498
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>ref|XM_801351.1| Trypanosoma cruzi strain CL Brener C-1-tetrahydrofolate synthase,
           cytoplasmic (Tc00.1047053509509.20) partial mRNA
          Length = 894

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 404 aatcctggcttccccatggc 423
           ||||||||||||||||||||
Sbjct: 659 aatcctggcttccccatggc 640
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>gb|AC115970.8| Mus musculus chromosome 10, clone RP24-77I13, complete sequence
          Length = 170563

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 349   gcctgttgtttccacagtga 368
             ||||||||||||||||||||
Sbjct: 71242 gcctgttgtttccacagtga 71223
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>emb|AL161628.9| Human DNA sequence from clone RP11-31K16 on chromosome 9 Contains a
              pseudogene similar to part of nucleolar protein 5A (56kDa
              with KKE/D repeat) (NOL5A) (NOP56), the ELAVL2 gene for
              ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2
              (Hu antigen B) (HUB, HELN1), two novel genes, the 5' end of
              a novel gene and a CpG island, complete sequence
          Length = 183483

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 361    cacagtgaacacaaagctgt 380
              ||||||||||||||||||||
Sbjct: 106215 cacagtgaacacaaagctgt 106196
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>emb|AL121584.24|HSBA388K2 Human DNA sequence from clone RP11-388K2 on chromosome 20 Contains part
             of the gene for a novel protein (LOC284776) and a putative
             novel gene, complete sequence
          Length = 145415

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   ctgcccatttctttcccaaa 214
             ||||||||||||||||||||
Sbjct: 11500 ctgcccatttctttcccaaa 11519
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>gb|AC127789.4| Rattus norvegicus 1 BAC CH230-15M17 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 240825

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    ttccccatggcctctgcttt 432
              ||||||||||||||||||||
Sbjct: 137023 ttccccatggcctctgcttt 137004
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>emb|AL590625.16| Mouse DNA sequence from clone RP23-467M8 on chromosome 13 Contains the
              Foxf2 gene for forkhead box F2, a novel gene and two CpG
              islands, complete sequence
          Length = 165745

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    ttccccatggcctctgcttt 432
              ||||||||||||||||||||
Sbjct: 110469 ttccccatggcctctgcttt 110488
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       gattaccgtaaagttttggt 103
                ||||||||||||||||||||
Sbjct: 40332176 gattaccgtaaagttttggt 40332195
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>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1455F06
          Length = 140848

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    gattaccgtaaagttttggt 103
             ||||||||||||||||||||
Sbjct: 41140 gattaccgtaaagttttggt 41159
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 424     ctctgctttcttgatcacct 443
               ||||||||||||||||||||
Sbjct: 2046595 ctctgctttcttgatcacct 2046614
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>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence
          Length = 181047

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 400   taccaatcctggcttccccatggc 423
             |||||| |||||||||||||||||
Sbjct: 71530 taccaaacctggcttccccatggc 71553
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>gb|AC173480.1| Mus musculus BAC clone RP23-422D12 from chromosome 6, complete sequence
          Length = 185966

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    cttccccatggcctctgctt 431
              ||||||||||||||||||||
Sbjct: 100891 cttccccatggcctctgctt 100872


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,893,771
Number of Sequences: 3902068
Number of extensions: 4893771
Number of successful extensions: 101063
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 100968
Number of HSP's gapped (non-prelim): 95
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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