>ATF1_SCHPO (P52890) Transcription factor atf1 (Transcription factor mts1)|
           (Protein sss1)
          Length = 566

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 117 NLPECSSNSHIE-AITIQTSLENATQLACTITPHSQTRNQSDLTHS 251
           NLP+ +SNS +  A ++   LEN T  + +  P S   NQS  T S
Sbjct: 397 NLPQKTSNSDMPTANSMPVKLENGTDYSTSQEPSSNANNQSSPTSS 442

>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3703

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +3

Query: 159  TIQTSLENATQLACTITPHSQTRNQSDLTHSYKMEHLHKLYNSLIQLRELQYNADRRAAP 338
            T++  L+ +    CT+   S T+    L H   + HLHKL       R LQ +A  +  P
Sbjct: 1534 TMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKL------KRALQESATGQPEP 1587

Query: 339  VSRSRN 356
             S   N
Sbjct: 1588 TSSPDN 1593

>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +3

Query: 159  TIQTSLENATQLACTITPHSQTRNQSDLTHSYKMEHLHKLYNSLIQLRELQYNADRRAAP 338
            T++  L+ +    CT+   S T+    L H   + HLHKL       R LQ +A  +  P
Sbjct: 1544 TMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKL------KRALQESATGQPEP 1597

Query: 339  VSRSRN 356
             S   N
Sbjct: 1598 TSSPDN 1603

>KPC1_CANAL (P43057) Protein kinase C-like 1 (EC 2.7.11.13) (PKC 1)|
          Length = 1097

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 271 CKCSILYEWVKSD*LRVCECGVMVQANC 188
           C C  +  W K +  +  ECGVM  A C
Sbjct: 495 CHCGYILPWGKKNVRKCTECGVMCHAQC 522

>FRAS1_HUMAN (Q86XX4) Extracellular matrix protein FRAS1 precursor|
          Length = 4007

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -2

Query: 357  CSAISTPVQLSCLRYIVAHVVVLGCCI-TCVSVPFYMSGLNPTD 229
            CSA S P++  CL+ +  +V+  G C+  C+S  +  SGL   D
Sbjct: 962  CSACSGPLKTDCLQCMDGYVLQDGACVEQCLSSFYQDSGLCKCD 1005

>O10S1_HUMAN (Q8NGN2) Olfactory receptor 10S1|
          Length = 322

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
 Frame = -2

Query: 372 GNKLWCSAISTPVQLSCLRY-IVAHVVVLGCCITCVSVPFYMSGLNPTD-----YEFVSV 211
           GN L    + +   LS   Y  + H+  L  C++ V+VP  M+GL   D     +E  +V
Sbjct: 45  GNLLILLTVGSDSHLSLPMYHFLGHLSFLDACLSTVTVPKVMAGLLTLDGKVISFEGCAV 104

Query: 210 VLWC 199
            L+C
Sbjct: 105 QLYC 108

>POLK_HUMAN (Q9UBT6) DNA polymerase kappa (EC 2.7.7.7) (DINB protein) (DINP)|
          Length = 870

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/85 (22%), Positives = 33/85 (38%)
 Frame = +3

Query: 45  TSTRERTGSAVTKRCEKHKIHALYNLPECSSNSHIEAITIQTSLENATQLACTITPHSQT 224
           T   ++     +  CEK    A   + E SS   I  +    +   A  +      HS+ 
Sbjct: 667 TKVNKKENVPASSLCEKQDYEAHPKIKEISSVDCIALVDTIDNSSKAESIDALSNKHSKE 726

Query: 225 RNQSDLTHSYKMEHLHKLYNSLIQL 299
              S  + S+ +EH H+  +S + L
Sbjct: 727 ECSSLPSKSFNIEHCHQNSSSTVSL 751

>HDA4_CAEBR (Q613L4) Histone deacetylase 4|
          Length = 892

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 18/55 (32%), Positives = 30/55 (54%)
 Frame = +3

Query: 162 IQTSLENATQLACTITPHSQTRNQSDLTHSYKMEHLHKLYNSLIQLRELQYNADR 326
           +QT L+   Q    +  H Q R Q +L+    ++H+H LY +L Q ++LQ   +R
Sbjct: 59  LQTQLQEYRQKQMDLIGHFQ-RAQQELS----VQHMHNLYTALQQQQQLQSLQER 108

>PSA73_DROME (Q27575) Proteasome subunit alpha type 7-1B (EC 3.4.25.1)|
           (Testis-specific proteasome 28 kDa subunit 1B)
           (Testis-specific alpha4-t2 proteasome subunit)
          Length = 252

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 18/71 (25%), Positives = 28/71 (39%)
 Frame = +3

Query: 27  IRYKYTTSTRERTGSAVTKRCEKHKIHALYNLPECSSNSHIEAITIQTSLENATQLACTI 206
           I Y++  +T  R+   V    EKH    L    E ++  HI    +  S  N TQ+   +
Sbjct: 154 IFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLVSVSSLNHTQMEVAV 213

Query: 207 TPHSQTRNQSD 239
             + Q     D
Sbjct: 214 LKYRQPLRMID 224


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,763,905
Number of Sequences: 219361
Number of extensions: 1076299
Number of successful extensions: 2838
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2837
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)