Clone Name | rbart24f07 |
---|---|
Clone Library Name | barley_pub |
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 42.7 bits (99), Expect = 5e-04 Identities = 18/28 (64%), Positives = 23/28 (82%) Frame = -2 Query: 474 DSGKKLVANNVIPANWRPNTDYRSFVQF 391 +SGKK++A +VIPANWRP+ Y S VQF Sbjct: 241 ESGKKVIAKDVIPANWRPDAVYTSNVQF 268
>EXB1B_MAIZE (Q07154) Beta-expansin 1b (Pollen allergen Zea m 1) (Zea m I)| (Fragment) Length = 191 Score = 42.4 bits (98), Expect = 6e-04 Identities = 17/28 (60%), Positives = 23/28 (82%) Frame = -2 Query: 474 DSGKKLVANNVIPANWRPNTDYRSFVQF 391 +SGKK++A ++IPANWRP+ Y S VQF Sbjct: 163 ESGKKVIAKDIIPANWRPDAVYTSNVQF 190
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 40.4 bits (93), Expect = 0.002 Identities = 17/28 (60%), Positives = 22/28 (78%) Frame = -2 Query: 474 DSGKKLVANNVIPANWRPNTDYRSFVQF 391 +SGK +VA+NVIPANW+P Y+S V F Sbjct: 246 ESGKTVVASNVIPANWQPGAIYKSNVNF 273
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 40.0 bits (92), Expect = 0.003 Identities = 17/28 (60%), Positives = 21/28 (75%) Frame = -2 Query: 474 DSGKKLVANNVIPANWRPNTDYRSFVQF 391 +S K +VA NVIPANW+P+ YRS V F Sbjct: 232 ESHKVIVAYNVIPANWKPDESYRSIVNF 259
>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1| Length = 246 Score = 36.2 bits (82), Expect = 0.044 Identities = 15/28 (53%), Positives = 21/28 (75%) Frame = -2 Query: 474 DSGKKLVANNVIPANWRPNTDYRSFVQF 391 + G LV ++VIPANW+P+T Y S +QF Sbjct: 217 EGGAHLVQDDVIPANWKPDTVYTSKLQF 244
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 33.5 bits (75), Expect = 0.29 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 Query: 471 SGKKLVANNVIPANWRPNTDYRSFVQF 391 SGKK++A VIP W P Y S V F Sbjct: 231 SGKKIIAKGVIPEKWSPGAIYHSKVNF 257
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 32.0 bits (71), Expect = 0.83 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -2 Query: 471 SGKKLVANNVIPANWRPNTDYRSFVQFS 388 +GK L A +V+P NW P Y S + FS Sbjct: 234 AGKTLSATDVVPRNWAPKATYSSRLNFS 261
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 30.0 bits (66), Expect = 3.2 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = -2 Query: 471 SGKKLVANNVIPANWRPNTDYRSFVQFS 388 + K L A +VIP+NW P Y S + FS Sbjct: 241 NNKTLSATDVIPSNWVPKATYTSRLNFS 268 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,739,467 Number of Sequences: 219361 Number of extensions: 1273580 Number of successful extensions: 3568 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3298 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3567 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)