>CATS_RAT (Q02765) Cathepsin S precursor (EC 3.4.22.27)|
          Length = 330

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 14/44 (31%), Positives = 20/44 (45%)
 Frame = +1

Query: 64  YLVITNADYSAKFIYRGKDESSTRPSSNHTTPCFRYISKAFPDQ 195
           Y++ T+ D  A + Y+  DE       N    C RYI   F D+
Sbjct: 190 YIIDTSIDSEASYPYKAMDEKCLYDPKNRAATCSRYIELPFGDE 233

>VGLG_CHAV (P13180) Spike glycoprotein precursor|
          Length = 524

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 12/24 (50%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +1

Query: 154 TPCFRYISKAFPDQTKF-WKPTRR 222
           TP + Y+S AFP+ TK  WKP  +
Sbjct: 17  TPLYSYLSIAFPENTKLDWKPVTK 40


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,186,358
Number of Sequences: 219361
Number of extensions: 529466
Number of successful extensions: 1520
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)