ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY348312.1| Oryza sativa (indica cultivar-group) GPRP mRNA, c... 119 8e-24
2dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 119 8e-24
3dbj|AK071554.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 8e-24
4dbj|AK068289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 8e-24
5dbj|AK060883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 119 8e-24
6dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0... 119 8e-24
7ref|XM_493896.1| Oryza sativa (japonica cultivar-group), predic... 109 8e-21
8dbj|AK099495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 5e-19
9emb|AJ242804.1|SST242804 Sporobolus stapfianus mRNA for putative... 82 2e-12
10gb|AY109327.1| Zea mays CL468_1 mRNA sequence 82 2e-12
11emb|X72383.1|DCA3GRP D.carota A3 mRNA for glycine rich protein 64 4e-07
12ref|NM_118040.3| Arabidopsis thaliana rhodopsin-like receptor AT... 54 4e-04
13gb|AF083724.1| Arabidopsis thaliana clone sps336 unknown mRNA 54 4e-04
14emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, ... 54 4e-04
15emb|AL021687.1|ATT18B16 Arabidopsis thaliana DNA chromosome 4, B... 54 4e-04
16emb|BX826905.1|CNS0A3BT Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
17emb|BX827783.1|CNS0A2A1 Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
18gb|AY088588.1| Arabidopsis thaliana clone 8188 mRNA, complete se... 54 4e-04
19gb|BT002527.1| Arabidopsis thaliana Unknown protein mRNA, comple... 54 4e-04
20gb|BT006561.1| Arabidopsis thaliana At4g19200 gene, complete cds 52 0.002
21gb|AY112420.1| Zea mays CL55919_1 mRNA sequence 48 0.025
22gb|AY109775.1| Zea mays CL62017_1 mRNA sequence 48 0.025
23ref|NM_123903.2| Arabidopsis thaliana rhodopsin-like receptor AT... 44 0.40
24gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 44 0.40
25gb|BC005782.1| Mus musculus cDNA clone MGC:12025 IMAGE:3603243, ... 44 0.40
26emb|X84315.1|ATGPRP A.thaliana GPRP gene 44 0.40
27gb|AY060514.1| Arabidopsis thaliana AT5g45350/MFC19_1 mRNA, comp... 44 0.40
28gb|AY052250.1| Arabidopsis thaliana AT5g45350/MFC19_1 mRNA, comp... 44 0.40
29gb|AY086217.1| Arabidopsis thaliana clone 22538 mRNA, complete s... 44 0.40
30dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.40
31ref|XM_594487.2| PREDICTED: Bos taurus similar to G-protein coup... 42 1.6
32gb|BT025414.1| Bos taurus G protein-coupled receptor, family C, ... 42 1.6
33emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
34emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
35gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 42 1.6
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
37gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 42 1.6
38ref|NM_208929.1| Eremothecium gossypii ACR174Cp (ACR174C), mRNA 42 1.6
39emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.6
40gb|BC089149.1| Xenopus laevis cDNA clone MGC:85067 IMAGE:6327400... 42 1.6
41ref|NM_001030902.1| Gallus gallus stromal membrane-associated pr... 40 6.2
42gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete... 40 6.2
43gb|AC122403.3| Mus musculus BAC clone RP24-112A10 from chromosom... 40 6.2
44gb|AC144488.2| Gasterosteus aculeatus clone CH213-119K16, comple... 40 6.2
45ref|XM_386854.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 40 6.2
46emb|AL731560.4| Human DNA sequence from clone RP11-481O16 on chr... 40 6.2
47gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.2
48ref|XM_787693.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.2
49emb|AJ851487.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.2
50gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete seq... 40 6.2
51emb|BX322600.13| Zebrafish DNA sequence from clone CH211-273N5, ... 40 6.2
52gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42... 40 6.2 
>gb|AY348312.1| Oryza sativa (indica cultivar-group) GPRP mRNA, complete cds
          Length = 640

 Score =  119 bits (60), Expect = 8e-24
 Identities = 108/122 (88%), Gaps = 9/122 (7%)
 Strand = Plus / Minus

                                                                       
Query: 270 gcgcattacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgc 329
           ||||||||||||||||||||||||||||| || ||   |||||||||||||   ||||||
Sbjct: 623 gcgcattacttccacttcttgaacttgccaccacc---gaacatgccgtgc---ccatgc 570

                                                                       
Query: 330 ttgccgtgcttgaacttgccatgg---ccgtgcttcccgtgcttgaacttgccgccgtgg 386
           ||||| ||||||||||||||||||   |||||||| || |||||||||||||||||||||
Sbjct: 569 ttgccatgcttgaacttgccatggtggccgtgcttgccatgcttgaacttgccgccgtgg 510

             
Query: 387 tg 388
           ||
Sbjct: 509 tg 508
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  119 bits (60), Expect = 8e-24
 Identities = 108/122 (88%), Gaps = 9/122 (7%)
 Strand = Plus / Plus

                                                                          
Query: 270    gcgcattacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgc 329
              ||||||||||||||||||||||||||||| || ||   |||||||||||||   ||||||
Sbjct: 940416 gcgcattacttccacttcttgaacttgccaccacc---gaacatgccgtgc---ccatgc 940469

                                                                          
Query: 330    ttgccgtgcttgaacttgccatgg---ccgtgcttcccgtgcttgaacttgccgccgtgg 386
              ||||| ||||||||||||||||||   |||||||| || |||||||||||||||||||||
Sbjct: 940470 ttgccatgcttgaacttgccatggtggccgtgcttgccatgcttgaacttgccgccgtgg 940529

                
Query: 387    tg 388
              ||
Sbjct: 940530 tg 940531
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>dbj|AK071554.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023104E19, full
           insert sequence
          Length = 926

 Score =  119 bits (60), Expect = 8e-24
 Identities = 108/122 (88%), Gaps = 9/122 (7%)
 Strand = Plus / Minus

                                                                       
Query: 270 gcgcattacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgc 329
           ||||||||||||||||||||||||||||| || ||   |||||||||||||   ||||||
Sbjct: 708 gcgcattacttccacttcttgaacttgccaccacc---gaacatgccgtgc---ccatgc 655

                                                                       
Query: 330 ttgccgtgcttgaacttgccatgg---ccgtgcttcccgtgcttgaacttgccgccgtgg 386
           ||||| ||||||||||||||||||   |||||||| || |||||||||||||||||||||
Sbjct: 654 ttgccatgcttgaacttgccatggtggccgtgcttgccatgcttgaacttgccgccgtgg 595

             
Query: 387 tg 388
           ||
Sbjct: 594 tg 593
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>dbj|AK068289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013147E18, full
            insert sequence
          Length = 2163

 Score =  119 bits (60), Expect = 8e-24
 Identities = 108/122 (88%), Gaps = 9/122 (7%)
 Strand = Plus / Minus

                                                                        
Query: 270  gcgcattacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgc 329
            ||||||||||||||||||||||||||||| || ||   |||||||||||||   ||||||
Sbjct: 1940 gcgcattacttccacttcttgaacttgccaccacc---gaacatgccgtgc---ccatgc 1887

                                                                        
Query: 330  ttgccgtgcttgaacttgccatgg---ccgtgcttcccgtgcttgaacttgccgccgtgg 386
            ||||| ||||||||||||||||||   |||||||| || |||||||||||||||||||||
Sbjct: 1886 ttgccatgcttgaacttgccatggtggccgtgcttgccatgcttgaacttgccgccgtgg 1827

              
Query: 387  tg 388
            ||
Sbjct: 1826 tg 1825
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>dbj|AK060883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-B01, full
            insert sequence
          Length = 1481

 Score =  119 bits (60), Expect = 8e-24
 Identities = 108/122 (88%), Gaps = 9/122 (7%)
 Strand = Plus / Minus

                                                                        
Query: 270  gcgcattacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgc 329
            ||||||||||||||||||||||||||||| || ||   |||||||||||||   ||||||
Sbjct: 1267 gcgcattacttccacttcttgaacttgccaccacc---gaacatgccgtgc---ccatgc 1214

                                                                        
Query: 330  ttgccgtgcttgaacttgccatgg---ccgtgcttcccgtgcttgaacttgccgccgtgg 386
            ||||| ||||||||||||||||||   |||||||| || |||||||||||||||||||||
Sbjct: 1213 ttgccatgcttgaacttgccatggtggccgtgcttgccatgcttgaacttgccgccgtgg 1154

              
Query: 387  tg 388
            ||
Sbjct: 1153 tg 1152
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>dbj|AP001111.1| Oryza sativa genomic DNA, chromosome 5, clone:P0699E04
          Length = 175439

 Score =  119 bits (60), Expect = 8e-24
 Identities = 108/122 (88%), Gaps = 9/122 (7%)
 Strand = Plus / Plus

                                                                         
Query: 270   gcgcattacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgc 329
             ||||||||||||||||||||||||||||| || ||   |||||||||||||   ||||||
Sbjct: 30813 gcgcattacttccacttcttgaacttgccaccacc---gaacatgccgtgc---ccatgc 30866

                                                                         
Query: 330   ttgccgtgcttgaacttgccatgg---ccgtgcttcccgtgcttgaacttgccgccgtgg 386
             ||||| ||||||||||||||||||   |||||||| || |||||||||||||||||||||
Sbjct: 30867 ttgccatgcttgaacttgccatggtggccgtgcttgccatgcttgaacttgccgccgtgg 30926

               
Query: 387   tg 388
             ||
Sbjct: 30927 tg 30928
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>ref|XM_493896.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 426

 Score =  109 bits (55), Expect = 8e-21
 Identities = 103/117 (88%), Gaps = 9/117 (7%)
 Strand = Plus / Minus

                                                                       
Query: 275 ttacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgcc 334
           |||||||||||||||||||||||| || ||   |||||||||||||   |||||||||||
Sbjct: 426 ttacttccacttcttgaacttgccaccacc---gaacatgccgtgc---ccatgcttgcc 373

                                                                    
Query: 335 gtgcttgaacttgccatgg---ccgtgcttcccgtgcttgaacttgccgccgtggtg 388
            ||||||||||||||||||   |||||||| || |||||||||||||||||||||||
Sbjct: 372 atgcttgaacttgccatggtggccgtgcttgccatgcttgaacttgccgccgtggtg 316
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>dbj|AK099495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027I01, full
           insert sequence
          Length = 928

 Score =  103 bits (52), Expect = 5e-19
 Identities = 106/122 (86%), Gaps = 9/122 (7%)
 Strand = Plus / Minus

                                                                       
Query: 270 gcgcattacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgc 329
           ||||||||||||||||||||||||| ||| || ||   |||||||||||||   ||||||
Sbjct: 709 gcgcattacttccacttcttgaactagccaccacc---gaacatgccgtgc---ccatgc 656

                                                                       
Query: 330 ttgccgtgcttgaacttgcca---tggccgtgcttcccgtgcttgaacttgccgccgtgg 386
           ||||| |||||||||||||||   ||||||||||| ||  ||||||||||||||||||||
Sbjct: 655 ttgccatgcttgaacttgccatggtggccgtgcttgccacgcttgaacttgccgccgtgg 596

             
Query: 387 tg 388
           ||
Sbjct: 595 tg 594
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>emb|AJ242804.1|SST242804 Sporobolus stapfianus mRNA for putative glycine and proline-rich
           protein
          Length = 855

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 78/89 (87%), Gaps = 6/89 (6%)
 Strand = Plus / Minus

                                                                       
Query: 273 cattacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttg 332
           |||||||||||||||||||||||   |||||| ||||||||||||||    || ||||||
Sbjct: 681 cattacttccacttcttgaactt---gccgccaccgaacatgccgtg---gccgtgcttg 628

                                        
Query: 333 ccgtgcttgaacttgccatggccgtgctt 361
           || |||||||||||||| |||||||||||
Sbjct: 627 ccatgcttgaacttgccgtggccgtgctt 599



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 332 gccgtgcttgaacttgccatggccgtgcttcccgtgcttgaacttgccg 380
           ||||||||||||||| |||||||||   |  ||||||||||||||||||
Sbjct: 607 gccgtgcttgaacttcccatggccgccgtgaccgtgcttgaacttgccg 559



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 341 gaacttgccatggccgtgcttcccgtgcttgaacttgccg 380
           |||| |||| ||||||||||| || |||||||||||||||
Sbjct: 649 gaacatgccgtggccgtgcttgccatgcttgaacttgccg 610
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>gb|AY109327.1| Zea mays CL468_1 mRNA sequence
          Length = 2907

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 75/85 (88%), Gaps = 6/85 (7%)
 Strand = Plus / Plus

                                                                       
Query: 277 acttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgccgt 336
           ||||||||||||||||||||||||||   ||||||||||||||   ||| |||||||| |
Sbjct: 193 acttccacttcttgaacttgccgccg---ccgaacatgccgtg---cccgtgcttgccat 246

                                    
Query: 337 gcttgaacttgccatggccgtgctt 361
           ||||||||||||| || ||||||||
Sbjct: 247 gcttgaacttgccgtgcccgtgctt 271



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 341 gaacttgccatggccgtgcttcccgtgcttgaacttgccg 380
           |||| |||| || |||||||| || |||||||||||||||
Sbjct: 221 gaacatgccgtgcccgtgcttgccatgcttgaacttgccg 260
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>emb|X72383.1|DCA3GRP D.carota A3 mRNA for glycine rich protein
          Length = 744

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                       
Query: 320 cttcccatgcttgccgtgcttgaacttgccatggccgtgcttcccgtgcttgaacttgcc 379
           |||||| ||||| || ||||| ||||| ||||| |||||||| |||||||||||||||||
Sbjct: 526 cttcccgtgctttccctgcttaaactttccatgaccgtgcttaccgtgcttgaacttgcc 467



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 327 tgcttgccgtgcttgaacttgccatggcc 355
           ||||| |||||||||||||||||||||||
Sbjct: 489 tgcttaccgtgcttgaacttgccatggcc 461
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>ref|NM_118040.3| Arabidopsis thaliana rhodopsin-like receptor AT4G19200 mRNA,
           complete cds
          Length = 974

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 attacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgc 333
           ||||||||||||||||||| ||||| || || || |||||||| || ||||| ||||| |
Sbjct: 643 attacttccacttcttgaatttgcctcctcctccaaacatgccatgtttcccgtgctttc 584

                  
Query: 334 cgtgctt 340
           | |||||
Sbjct: 583 catgctt 577



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 315 ccgtgcttcccatgcttgccgtgcttgaacttgcc 349
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 593 ccgtgctttccatgctttccgtgcttgaatttgcc 559
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>gb|AF083724.1| Arabidopsis thaliana clone sps336 unknown mRNA
          Length = 814

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 attacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgc 333
           ||||||||||||||||||| ||||| || || || |||||||| || ||||| ||||| |
Sbjct: 586 attacttccacttcttgaatttgcctcctcctccaaacatgccatgtttcccgtgctttc 527

                  
Query: 334 cgtgctt 340
           | |||||
Sbjct: 526 catgctt 520



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 315 ccgtgcttcccatgcttgccgtgcttgaacttgcc 349
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 536 ccgtgctttccatgctttccgtgcttgaatttgcc 502
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>emb|AL161550.2|ATCHRIV50 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 50
          Length = 199382

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 274   attacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgc 333
             ||||||||||||||||||| ||||| || || || |||||||| || ||||| ||||| |
Sbjct: 84455 attacttccacttcttgaatttgcctcctcctccaaacatgccatgtttcccgtgctttc 84396

                    
Query: 334   cgtgctt 340
             | |||||
Sbjct: 84395 catgctt 84389



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 315   ccgtgcttcccatgcttgccgtgcttgaacttgcc 349
             |||||||| |||||||| ||||||||||| |||||
Sbjct: 84405 ccgtgctttccatgctttccgtgcttgaatttgcc 84371
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>emb|AL021687.1|ATT18B16 Arabidopsis thaliana DNA chromosome 4, BAC clone T18B16 (ESSA project)
          Length = 96574

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                         
Query: 274   attacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgc 333
             ||||||||||||||||||| ||||| || || || |||||||| || ||||| ||||| |
Sbjct: 68016 attacttccacttcttgaatttgcctcctcctccaaacatgccatgtttcccgtgctttc 67957

                    
Query: 334   cgtgctt 340
             | |||||
Sbjct: 67956 catgctt 67950



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 315   ccgtgcttcccatgcttgccgtgcttgaacttgcc 349
             |||||||| |||||||| ||||||||||| |||||
Sbjct: 67966 ccgtgctttccatgctttccgtgcttgaatttgcc 67932
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>emb|BX826905.1|CNS0A3BT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB74ZE10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 841

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 attacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgc 333
           ||||||||||||||||||| ||||| || || || |||||||| || ||||| ||||| |
Sbjct: 593 attacttccacttcttgaatttgcctcctcctccaaacatgccatgtttcccgtgctttc 534

                  
Query: 334 cgtgctt 340
           | |||||
Sbjct: 533 catgctt 527



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 315 ccgtgcttcccatgcttgccgtgcttgaacttgcc 349
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 543 ccgtgctttccatgctttccgtgcttgaatttgcc 509
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>emb|BX827783.1|CNS0A2A1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH21ZA11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 915

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 attacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgc 333
           ||||||||||||||||||| ||||| || || || |||||||| || ||||| ||||| |
Sbjct: 584 attacttccacttcttgaatttgcctcctcctccaaacatgccatgtttcccgtgctttc 525

                  
Query: 334 cgtgctt 340
           | |||||
Sbjct: 524 catgctt 518



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 315 ccgtgcttcccatgcttgccgtgcttgaacttgcc 349
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 534 ccgtgctttccatgctttccgtgcttgaatttgcc 500
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>gb|AY088588.1| Arabidopsis thaliana clone 8188 mRNA, complete sequence
          Length = 918

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 attacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgc 333
           ||||||||||||||||||| ||||| || || || |||||||| || ||||| ||||| |
Sbjct: 643 attacttccacttcttgaatttgcctcctcctccaaacatgccatgtttcccgtgctttc 584

                  
Query: 334 cgtgctt 340
           | |||||
Sbjct: 583 catgctt 577



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 315 ccgtgcttcccatgcttgccgtgcttgaacttgcc 349
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 593 ccgtgctttccatgctttccgtgcttgaatttgcc 559
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>gb|BT002527.1| Arabidopsis thaliana Unknown protein mRNA, complete cds
          Length = 857

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 57/67 (85%)
 Strand = Plus / Minus

                                                                       
Query: 274 attacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgc 333
           ||||||||||||||||||| ||||| || || || |||||||| || ||||| ||||| |
Sbjct: 606 attacttccacttcttgaatttgcctcctcctccaaacatgccatgtttcccgtgctttc 547

                  
Query: 334 cgtgctt 340
           | |||||
Sbjct: 546 catgctt 540



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 315 ccgtgcttcccatgcttgccgtgcttgaacttgcc 349
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 556 ccgtgctttccatgctttccgtgcttgaatttgcc 522
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>gb|BT006561.1| Arabidopsis thaliana At4g19200 gene, complete cds
          Length = 540

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                       
Query: 275 ttacttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttgcc 334
           |||||||||||||||||| ||||| || || || |||||||| || ||||| ||||| ||
Sbjct: 540 ttacttccacttcttgaatttgcctcctcctccaaacatgccatgtttcccgtgctttcc 481

                 
Query: 335 gtgctt 340
            |||||
Sbjct: 480 atgctt 475



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 315 ccgtgcttcccatgcttgccgtgcttgaacttgcc 349
           |||||||| |||||||| ||||||||||| |||||
Sbjct: 491 ccgtgctttccatgctttccgtgcttgaatttgcc 457
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>gb|AY112420.1| Zea mays CL55919_1 mRNA sequence
          Length = 704

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 329 cttgccgtgcttgaacttgccatg 352
           ||||||||||||||||||||||||
Sbjct: 241 cttgccgtgcttgaacttgccatg 264
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>gb|AY109775.1| Zea mays CL62017_1 mRNA sequence
          Length = 689

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 277 acttccacttcttgaacttgccgccgcc 304
           |||||||||| |||||||||||||||||
Sbjct: 481 acttccacttgttgaacttgccgccgcc 454
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>ref|NM_123903.2| Arabidopsis thaliana rhodopsin-like receptor AT5G45350 mRNA,
           complete cds
          Length = 862

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 48/56 (85%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                   
Query: 277 acttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttg 332
           |||||||||||||||||||||| || ||    ||||| || |||||||||||||||
Sbjct: 597 acttccacttcttgaacttgcctcctcca---aacattccatgcttcccatgcttg 545
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 354     ccgtgcttcccgtgcttgaact 375
               ||||||||||||||||||||||
Sbjct: 1392647 ccgtgcttcccgtgcttgaact 1392626
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>gb|BC005782.1| Mus musculus cDNA clone MGC:12025 IMAGE:3603243, complete cds
          Length = 1103

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 274 attacttccacttcttgaactt 295
           ||||||||||||||||||||||
Sbjct: 742 attacttccacttcttgaactt 721
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>emb|X84315.1|ATGPRP A.thaliana GPRP gene
          Length = 2103

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 48/56 (85%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                    
Query: 277  acttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttg 332
            |||||||||||||||||||||| || ||    ||||| || |||||||||||||||
Sbjct: 1901 acttccacttcttgaacttgcctcctcca---aacattccatgcttcccatgcttg 1849
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>gb|AY060514.1| Arabidopsis thaliana AT5g45350/MFC19_1 mRNA, complete cds
          Length = 534

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 48/56 (85%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                   
Query: 277 acttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttg 332
           |||||||||||||||||||||| || ||    ||||| || |||||||||||||||
Sbjct: 532 acttccacttcttgaacttgcctcctcca---aacattccatgcttcccatgcttg 480
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>gb|AY052250.1| Arabidopsis thaliana AT5g45350/MFC19_1 mRNA, complete cds
          Length = 855

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 48/56 (85%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                   
Query: 277 acttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttg 332
           |||||||||||||||||||||| || ||    ||||| || |||||||||||||||
Sbjct: 590 acttccacttcttgaacttgcctcctcca---aacattccatgcttcccatgcttg 538
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>gb|AY086217.1| Arabidopsis thaliana clone 22538 mRNA, complete sequence
          Length = 787

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 48/56 (85%), Gaps = 3/56 (5%)
 Strand = Plus / Minus

                                                                   
Query: 277 acttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttg 332
           |||||||||||||||||||||| || ||    ||||| || |||||||||||||||
Sbjct: 597 acttccacttcttgaacttgcctcctcca---aacattccatgcttcccatgcttg 545
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>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19
          Length = 85020

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 48/56 (85%), Gaps = 3/56 (5%)
 Strand = Plus / Plus

                                                                    
Query: 277  acttccacttcttgaacttgccgccgcccccgaacatgccgtgcttcccatgcttg 332
            |||||||||||||||||||||| || ||    ||||| || |||||||||||||||
Sbjct: 1508 acttccacttcttgaacttgcctcctcca---aacattccatgcttcccatgcttg 1560
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>ref|XM_594487.2| PREDICTED: Bos taurus similar to G-protein coupled receptor family
           C group 5 member B precursor (Retinoic acid induced gene
           2 protein) (RAIG-2) (A-69G12.1) (LOC516334), partial
           mRNA
          Length = 2666

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 278 cttccacttcttgaacttgcc 298
           |||||||||||||||||||||
Sbjct: 967 cttccacttcttgaacttgcc 947
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>gb|BT025414.1| Bos taurus G protein-coupled receptor, family C, group 5, member B
           (GPRC5B), mRNA, complete cds
          Length = 1321

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 278 cttccacttcttgaacttgcc 298
           |||||||||||||||||||||
Sbjct: 779 cttccacttcttgaacttgcc 759
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>emb|AL731607.3|OSJN00250 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0063C18,
             complete sequence
          Length = 150416

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    atagtgccaaatttatatata 109
             |||||||||||||||||||||
Sbjct: 46822 atagtgccaaatttatatata 46842
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>emb|AL606455.3|OSJN00015 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0079B02,
             complete sequence
          Length = 126659

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    atagtgccaaatttatatata 109
             |||||||||||||||||||||
Sbjct: 82408 atagtgccaaatttatatata 82428
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>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 313    tgccgtgcttcccatgcttgccgtgcttg 341
              |||||||||| || |||||||||||||||
Sbjct: 659616 tgccgtgcttgccgtgcttgccgtgcttg 659644



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 313    tgccgtgcttcccatgcttgccgtgcttg 341
              |||||||||| || |||||||||||||||
Sbjct: 659607 tgccgtgcttgccgtgcttgccgtgcttg 659635



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 313    tgccgtgcttcccatgcttgccgtgctt 340
              |||||||||| || ||||||||||||||
Sbjct: 659625 tgccgtgcttgccgtgcttgccgtgctt 659652



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 314    gccgtgcttcccatgcttgccgtgcttg 341
              ||||||||| || |||||||||||||||
Sbjct: 659599 gccgtgcttgccgtgcttgccgtgcttg 659626
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 89       atagtgccaaatttatatata 109
                |||||||||||||||||||||
Sbjct: 32687387 atagtgccaaatttatatata 32687407
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>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 414    tgtccgcccatcatgcctccc 434
              |||||||||||||||||||||
Sbjct: 429344 tgtccgcccatcatgcctccc 429324



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    cttgccatggccgtgcttcc 363
              ||||||||||||||||||||
Sbjct: 741764 cttgccatggccgtgcttcc 741745
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>ref|NM_208929.1| Eremothecium gossypii ACR174Cp (ACR174C), mRNA
          Length = 1146

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 313 tgccgtgcttcccatgcttgccgtgcttg 341
           |||||||||| || |||||||||||||||
Sbjct: 219 tgccgtgcttgccgtgcttgccgtgcttg 191



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 313 tgccgtgcttcccatgcttgccgtgcttg 341
           |||||||||| || |||||||||||||||
Sbjct: 210 tgccgtgcttgccgtgcttgccgtgcttg 182



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 314 gccgtgcttcccatgcttgccgtgcttg 341
           ||||||||| || |||||||||||||||
Sbjct: 227 gccgtgcttgccgtgcttgccgtgcttg 200



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 313 tgccgtgcttcccatgcttgccgtgctt 340
           |||||||||| || ||||||||||||||
Sbjct: 201 tgccgtgcttgccgtgcttgccgtgctt 174
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>emb|AL442112.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0423H10, complete
             sequence
          Length = 76529

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    atagtgccaaatttatatata 109
             |||||||||||||||||||||
Sbjct: 19660 atagtgccaaatttatatata 19680
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>gb|BC089149.1| Xenopus laevis cDNA clone MGC:85067 IMAGE:6327400, complete cds
          Length = 3064

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 202  ttctggaagcctacacgaaga 222
            |||||||||||||||||||||
Sbjct: 1622 ttctggaagcctacacgaaga 1642
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>ref|NM_001030902.1| Gallus gallus stromal membrane-associated protein 1-like (SMAP1L),
           mRNA
          Length = 2301

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 ccatcatgcctcccatcatg 440
           ||||||||||||||||||||
Sbjct: 970 ccatcatgcctcccatcatg 951
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>gb|AC007928.7| Drosophila melanogaster clone BACR04O02, complete sequence
          Length = 176395

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    gaccaaaccaagttctggaa 209
              ||||||||||||||||||||
Sbjct: 102983 gaccaaaccaagttctggaa 102964
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>gb|AC122403.3| Mus musculus BAC clone RP24-112A10 from chromosome 16, complete
             sequence
          Length = 169481

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 159   ctgctttagatacatctcta 178
             ||||||||||||||||||||
Sbjct: 97867 ctgctttagatacatctcta 97848
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>gb|AC144488.2| Gasterosteus aculeatus clone CH213-119K16, complete sequence
          Length = 217665

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 64     tatcttgtcatcacaaacgcagactata 91
              |||||||||| |||||||||||||||||
Sbjct: 215030 tatcttgtca-cacaaacgcagactata 215004
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>ref|XM_386854.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06678.1)
            partial mRNA
          Length = 2097

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  tgccgccgcccccgaacatg 314
            ||||||||||||||||||||
Sbjct: 1900 tgccgccgcccccgaacatg 1881
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>emb|AL731560.4| Human DNA sequence from clone RP11-481O16 on chromosome 10 Contains
             part of the KCNMA1 gene for potassium large conductance
             calcium-activated channel subfamily M alpha member 1,
             complete sequence
          Length = 102416

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   cttcccatgcttgccgtgct 339
             ||||||||||||||||||||
Sbjct: 17631 cttcccatgcttgccgtgct 17612
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 314     gccgtgcttcccatgcttgccgtgcttg 341
               ||||||||| || |||||||||||||||
Sbjct: 2328589 gccgtgcttgccgtgcttgccgtgcttg 2328562
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>ref|XM_787693.1| PREDICTED: Strongylocentrotus purpuratus similar to CG4076-PA
           (LOC587991), partial mRNA
          Length = 1075

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 408 cctccatgtccgcccatcatgcct 431
           ||||||||||| ||||||||||||
Sbjct: 212 cctccatgtccacccatcatgcct 189
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>emb|AJ851487.1| Gallus gallus mRNA for hypothetical protein, clone 3n15
          Length = 2301

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 421 ccatcatgcctcccatcatg 440
           ||||||||||||||||||||
Sbjct: 970 ccatcatgcctcccatcatg 951
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>gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete sequence
          Length = 108135

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    tgccaaatttatatatagag 112
             ||||||||||||||||||||
Sbjct: 46049 tgccaaatttatatatagag 46068
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>emb|BX322600.13| Zebrafish DNA sequence from clone CH211-273N5, complete sequence
          Length = 22306

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    agtcatatcttgtcatcaca 78
             ||||||||||||||||||||
Sbjct: 14304 agtcatatcttgtcatcaca 14323
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>gb|AE003704.3| Drosophila melanogaster chromosome 3R, section 42 of 118 of the complete
              sequence
          Length = 220679

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    gaccaaaccaagttctggaa 209
              ||||||||||||||||||||
Sbjct: 202720 gaccaaaccaagttctggaa 202739


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,527,264
Number of Sequences: 3902068
Number of extensions: 3527264
Number of successful extensions: 65822
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 65485
Number of HSP's gapped (non-prelim): 281
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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