>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22,
              complete sequence
          Length = 173903

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                       
Query: 421    caacatcctcagcttcattgtttccagatcaatggagagca 461
              |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 123692 caacttcctcagcttcatggtttccagatcaatggagagca 123732

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                        
Query: 421     caacatcctcagcttcattgtttccagatcaatggagagca 461
               |||| ||||||||||||| ||||||||||||||||||||||
Sbjct: 2677172 caacttcctcagcttcatggtttccagatcaatggagagca 2677212

>gb|AC010185.23|AC010185 Homo sapiens 12 BAC RP11-59N23 (Rosewell Park Cancer Institute Human
             Bac Library) complete sequence
          Length = 38150

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 200   gaggttcagaaatttaggcatggt 223
             ||||||||||||||||||||||||
Sbjct: 14382 gaggttcagaaatttaggcatggt 14359

>gb|AC122893.6| Mus musculus BAC clone RP23-67C3 from chromosome 17, complete
            sequence
          Length = 206456

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 271  cttcctcttggttacctctgca 292
            ||||||||||||||||||||||
Sbjct: 9557 cttcctcttggttacctctgca 9536

>gb|AC105299.44| Mus musculus strain C57BL/6J clone rp23-27h12 map 17, complete sequence
          Length = 221749

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 271    cttcctcttggttacctctgca 292
              ||||||||||||||||||||||
Sbjct: 217060 cttcctcttggttacctctgca 217039

>gb|AC013475.14| Homo sapiens BAC clone RP11-525B5 from 2, complete sequence
          Length = 193963

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 446   agatcaatggagagcaaacaat 467
             ||||||||||||||||||||||
Sbjct: 40032 agatcaatggagagcaaacaat 40053

>emb|AL834320.1|HSM805367 Homo sapiens mRNA; cDNA DKFZp761D20121 (from clone DKFZp761D20121)
          Length = 7382

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gcaagaagaccacaccagca 496
            ||||||||||||||||||||
Sbjct: 1037 gcaagaagaccacaccagca 1018

>gb|BC065289.1| Homo sapiens MON2 homolog (S. cerevisiae), mRNA (cDNA clone
            IMAGE:6064181), partial cds
          Length = 2360

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gcaagaagaccacaccagca 496
            ||||||||||||||||||||
Sbjct: 2066 gcaagaagaccacaccagca 2047

>emb|AL603764.27| Human DNA sequence from clone RP11-481L19 on chromosome 10 Contains the
             3' end of the PRSS11 gene for protease serine 11 (IGF
             binding) and the DMBT1 gene for deleted in malignant brain
             tumors 1, complete sequence
          Length = 191741

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   tgtcaccataagctgtagtg 323
             ||||||||||||||||||||
Sbjct: 62142 tgtcaccataagctgtagtg 62161

>ref|NM_015026.1| Homo sapiens MON2 homolog (S. cerevisiae) (MON2), mRNA
          Length = 6086

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gcaagaagaccacaccagca 496
            ||||||||||||||||||||
Sbjct: 2077 gcaagaagaccacaccagca 2058

>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    ggcatgaaggcggccatgcc 373
              ||||||||||||||||||||
Sbjct: 247105 ggcatgaaggcggccatgcc 247124

>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    ggcatgaaggcggccatgcc 373
              ||||||||||||||||||||
Sbjct: 245206 ggcatgaaggcggccatgcc 245225

>emb|AJ243211.1|HSA243211 Homo sapiens DMBT1 candidate tumour suppressor gene, exons 1 to 55
          Length = 103330

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   tgtcaccataagctgtagtg 323
             ||||||||||||||||||||
Sbjct: 18179 tgtcaccataagctgtagtg 18198

>gb|AC117452.2| Homo sapiens 3 BAC RP11-341J3 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 193285

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 200    gaggttcagaaatttaggca 219
              ||||||||||||||||||||
Sbjct: 186424 gaggttcagaaatttaggca 186405

>emb|BX537415.1|HSM805717 Homo sapiens mRNA; cDNA DKFZp686F0546 (from clone DKFZp686F0546)
          Length = 6086

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gcaagaagaccacaccagca 496
            ||||||||||||||||||||
Sbjct: 2077 gcaagaagaccacaccagca 2058

>emb|AL833066.2|HSM804377 Homo sapiens mRNA; cDNA DKFZp451J0315 (from clone DKFZp451J0315)
          Length = 6144

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gcaagaagaccacaccagca 496
            ||||||||||||||||||||
Sbjct: 2074 gcaagaagaccacaccagca 2055

>gb|AC008749.6| Homo sapiens chromosome 19 clone CTD-2611O12, complete sequence
          Length = 142439

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   caatggagagcaaacaatcc 469
             ||||||||||||||||||||
Sbjct: 25644 caatggagagcaaacaatcc 25625

>gb|AC119729.5| Homo sapiens 3 BAC RP11-36I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 125847

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   gaggttcagaaatttaggca 219
             ||||||||||||||||||||
Sbjct: 45502 gaggttcagaaatttaggca 45483

>dbj|AK123842.1| Homo sapiens cDNA FLJ41848 fis, clone NT2RI3003382
          Length = 4047

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gcaagaagaccacaccagca 496
            ||||||||||||||||||||
Sbjct: 2071 gcaagaagaccacaccagca 2052

>gb|AC027152.11| Homo sapiens chromosome 17, clone RP11-456D7, complete sequence
          Length = 132735

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 420   ccaacatcctcagcttcatt 439
             ||||||||||||||||||||
Sbjct: 89347 ccaacatcctcagcttcatt 89328

>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 66     agacggtcagacagatgaac 85
              ||||||||||||||||||||
Sbjct: 639818 agacggtcagacagatgaac 639799

>gb|AC026115.27| Homo sapiens 12 BAC RP11-1026F22 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 99545

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 477   gcaagaagaccacaccagca 496
             ||||||||||||||||||||
Sbjct: 32293 gcaagaagaccacaccagca 32274

>gb|AC021066.37| Homo sapiens 12 BAC RP11-845M18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 158285

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 205    tcagaaatttaggcatggtt 224
              ||||||||||||||||||||
Sbjct: 148829 tcagaaatttaggcatggtt 148848

>dbj|AB028963.3| Homo sapiens mRNA for KIAA1040 protein, partial cds
          Length = 6387

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gcaagaagaccacaccagca 496
            ||||||||||||||||||||
Sbjct: 2047 gcaagaagaccacaccagca 2028

>ref|XM_215222.3| PREDICTED: Rattus norvegicus centrin 2 (Cetn2), mRNA
          Length = 1510

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 304  tgtcaccataagctgtagtg 323
            ||||||||||||||||||||
Sbjct: 1337 tgtcaccataagctgtagtg 1356

>dbj|AB017814.1| Homo sapiens mRNA for SF21 protein, complete cds
          Length = 5883

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gcaagaagaccacaccagca 496
            ||||||||||||||||||||
Sbjct: 1804 gcaagaagaccacaccagca 1785


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,213,738
Number of Sequences: 3902068
Number of extensions: 4213738
Number of successful extensions: 69068
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68992
Number of HSP's gapped (non-prelim): 76
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)