ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart24e05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OR6M1_HUMAN (Q8NGM8) Olfactory receptor 6M1 (Olfactory receptor ... 32 0.61
2DAL81_YEAST (P21657) Transcriptional activator protein DAL81 (Re... 28 8.8

>OR6M1_HUMAN (Q8NGM8) Olfactory receptor 6M1 (Olfactory receptor OR11-271)|
          Length = 313

 Score = 31.6 bits (70), Expect = 0.61
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = -3

Query: 156 FFFFFAGNVEFSLLGA*SLDFLRYRGIAK*LSFVSPLLHTVVIN 25
           +F+FF G VEF LL   S D  RY  I        PL +TV++N
Sbjct: 100 YFYFFLGTVEFILLAVMSFD--RYMAIC------DPLHYTVIMN 135



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>DAL81_YEAST (P21657) Transcriptional activator protein DAL81 (Regulatory|
           protein UGA35)
          Length = 970

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +2

Query: 41  CKRGETKLNYLAIPLYLKKSRD*APNKLNSTLPAKKKKNW 160
           C+   TK  +   P YLK++   A N + ++  +K+ KN+
Sbjct: 172 CETSRTKCTFSIAPNYLKRTSSGANNNMPTSSNSKRMKNF 211


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,619,349
Number of Sequences: 219361
Number of extensions: 301029
Number of successful extensions: 488
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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