Clone Name | rbart24e05 |
---|---|
Clone Library Name | barley_pub |
>gb|AC073617.16| Homo sapiens Xp BAC RP11-413F15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151302 Score = 42.1 bits (21), Expect = 0.56 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 acctcaagaaatcaagagact 107 ||||||||||||||||||||| Sbjct: 48173 acctcaagaaatcaagagact 48193
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 42.1 bits (21), Expect = 0.56 Identities = 24/25 (96%) Strand = Plus / Minus Query: 37 cgtatgtaaaaggggagaaacaaag 61 |||||||||||||| |||||||||| Sbjct: 4289606 cgtatgtaaaagggaagaaacaaag 4289582
>emb|CR940311.11| M.truncatula DNA sequence from clone MTH2-17E17 on chromosome 3, complete sequence Length = 122868 Score = 38.2 bits (19), Expect = 8.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 84 tatacctcaagaaatcaagagac 106 ||||||||||||||| ||||||| Sbjct: 79478 tatacctcaagaaataaagagac 79456
>emb|Z72514.1|CET10B10 Caenorhabditis elegans Cosmid T10B10, complete sequence Length = 40460 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 117 acaaactaaactctacatt 135 ||||||||||||||||||| Sbjct: 37400 acaaactaaactctacatt 37382
>emb|Z73016.1|SCYGR231C S.cerevisiae chromosome VII reading frame ORF YGR231c Length = 1653 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 tcaagaaatcaagagacta 108 ||||||||||||||||||| Sbjct: 399 tcaagaaatcaagagacta 381
>emb|X87941.1|SCDNAGENS S.cerevisiae CRM1, YML9, PET54, SMI1, PHO81, YHB4 and PFK1 genes Length = 43118 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 tcaagaaatcaagagacta 108 ||||||||||||||||||| Sbjct: 24463 tcaagaaatcaagagacta 24445
>ref|XM_781530.1| PREDICTED: Strongylocentrotus purpuratus similar to inhibitor of apoptosis protein 1 (LOC581540), partial mRNA Length = 1619 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 gtatgtaaaaggggagaaa 56 ||||||||||||||||||| Sbjct: 1576 gtatgtaaaaggggagaaa 1558
>gb|AC008249.14| Homo sapiens 3 BAC RP11-211P13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184203 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 87 acctcaagaaatcaagaga 105 ||||||||||||||||||| Sbjct: 152585 acctcaagaaatcaagaga 152567
>gb|AC157937.6| Mus musculus chromosome 1, clone RP23-417N10, complete sequence Length = 173856 Score = 38.2 bits (19), Expect = 8.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 42 gtaaaaggggagaaacaaa 60 ||||||||||||||||||| Sbjct: 48259 gtaaaaggggagaaacaaa 48277
>emb|BX640579.10| Zebrafish DNA sequence from clone CH211-266K5 in linkage group 19, complete sequence Length = 168768 Score = 38.2 bits (19), Expect = 8.8 Identities = 25/27 (92%) Strand = Plus / Minus Query: 26 ttaataactaccgtatgtaaaagggga 52 ||||||||||| |||||| |||||||| Sbjct: 74063 ttaataactacagtatgttaaagggga 74037
>gb|AC147446.3| Gallus gallus BAC clone CH261-7A22 from chromosome unknown, complete sequence Length = 182128 Score = 38.2 bits (19), Expect = 8.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 49 gggagaaacaaagcttaattact 71 ||||||||||||||| ||||||| Sbjct: 124788 gggagaaacaaagctaaattact 124810
>gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome 15, complete sequence Length = 228138 Score = 38.2 bits (19), Expect = 8.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 44 aaaaggggagaaacaaagcttaa 66 ||||| ||||||||||||||||| Sbjct: 78671 aaaagaggagaaacaaagcttaa 78693 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,278,920 Number of Sequences: 3902068 Number of extensions: 1278920 Number of successful extensions: 93598 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93546 Number of HSP's gapped (non-prelim): 52 length of query: 179 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 157 effective length of database: 17,147,199,772 effective search space: 2692110364204 effective search space used: 2692110364204 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)